RLG00000026211

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0009257
Physical Location & Seq
Forward (+)
1252654 .. 1256988
4335 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026211

Sequence Viewer

Length: 2808 bp
ATGCCCACCTCTTCACTCCCAAACAAATCTCCTAGACCCTCCTCCTCACCCATTTACCGTTACTCAATTGGGCTACTCAAAAGGGTAATGGGGAGCTTTAGCGAAGAGGAATTCGCGTTTTTTGATGCCCATGAGGATATTGCATCAGTGTCTGATGCAAGTCGTGAGAGCATTGAGGTATTGGAAGCGAGTTCTTCTTCCATGAGTTGGGTTCGGGATAGTTTTCCTTATGATGTGTGGGTTAGAAGCCCTGGGAGTGTGAAGGAGCGTCGGGTTAAGTTTCTGGATTGGATGAAAGTTAGTGCAGAGAAGATTGTCGGAGAGAATATGGTGGAAGTGTCTAGTGGTGTGGCGGGGGAAGTAGGTAGAGTTAGAGAGAGTAGTGGGGCTGTGTTGAGATCCTTATCTTTTGAAGGGGAGTTTTCTTCAAGTCGGTCTTCAATGTCATTCTGGGCTAATGAATTTAGAGATGGGAATTTGAGTGGGAGAATGGAGTGTAATGGAGATGAAGTAGGGCCGGTTGGGAAGGTCAGTGAAGGTCGAGAAGTTATTGAAGAGTCTGAGCGCACTTCGTTCTCATTATCTCATCAATTGAGTGAAGTCAAAGTTGAAGAGATTAGCAGTAAGGGGGCGTTACTGAAGAGAGTTAAGAAGAAGTGGTTGCATAGATTTCGGTCCATGACATGCCTTGATGATAGGCAAGGGATTGCTGACAGGTTGGCAGAGAATGATAATGATAGAATTATGGGAATAAGGTCTTATAGAGTGAAGGTTCGTCATTCCGGGAAGCGGTTGAAGGAACTCTCAGCTCTTTATATGGGACAGGATATCCAGGCCCATGAGGGTTCAATTTTGGCCATGAAATTTAGTCCTGATGGACAGTACCTAGCAAGTGCTGGTGAAGATGGGATTGTGCGAGTCTGGCAAGTGGTGGAGAATCAGAGGTGTAATGAACTTGACATTCCAGAGATAGATCCATCCTGCATATACTTCACCGTGAATCATCTCTCCGAACTAAATCCACTATTTGCGGATAAAGAGAAAGTGAGTAAAGCACGTAGCATGACAAAAACATCAGATTCAGCATGTGTTATTTTTCCCCCAAAAGTCTTTCGGATTGTGGACAAACCATTGCATGAGTTTCATGGGCATGGTGGTGAGATTTTGGATCTCTCCTGGTCAAAGAACAATTATCTACTGTCATCTTCTGTTGACAAAACTGTTCGTCTATGGCAAGTGGGATGCAATGATTGCCTCAAAGTCTTTGCACATAGTAATTACGTGACTTGTGTTCAATTCAATCCTGTGGATGATAACTACTTTATCAGTGGTTCAATAGATGGCAAAGTTCGCATTTGGGGAATTCCTTGCTGTCAAGTTGTTGATTATAGTGATGTGCGAGATATAGTTTCTGCGGTGTGCTATCGCCCTGATGGGCAGGGAGCTATTGTAGGCTCAATGACAGGCTTATGCCGCTTTTATAATATATCAGATAATCATTTGCAAATGGAGGCTGAAATATGTTTGTACAGTAAAAAGAAGGCTCCCTGCAAAAAGATAACAGGCTTCGAGTTTTTCCTACAAGATCCTAGCAAAGTAATGGTCACTTGCGCCGATTCGAAAGTCAGAATTCTTCATGGTCTGAATGTGGTTGGAAAATACAAGGGATTACGGAATGCAGCAAACCTGAGATCTGCGACTTTTACTTCAGATGGGAAACATATAATATCAGCAAGTGAGGATTCTAATGTATACATATGGAACTGCAGTGATCAGGAGAAAAACTTTTTCTCTCAAGTAAAAAAAACTAAATCATGTGAGCGGTTCACCACTGATGCTTCCGTAGCAATACCATGGTCTGGTTTGAAATGTGAGGCCTTAGAAAATGCTAGGAACTTTGGTGTCGTGGAAAATAATCTACCAGAAACTCTACCTTTTTCTTCACCCGCATGCTTTTCTCTGAGCCAAGAATCTCTCCTTCAGTCTATTCCGAAAGGATCTGCGACTTGGCCCGAGGAGAAGCTTCCAACATCAAGCCCCTTGACAAAGTCATCTACTATGCATAGATCCGAGTACAAGTTTTTTAAAACTTCATGCCAGAGCACATCGAGTTCCCATGCATGGGGTCTGGTTATTGTGACCGCAGGTTGGGATGGAAGGATCAAATCATTCCACAATTATGGGTTACCATGCGCTCTTCAGCTGATTACAAGCTACAAATCTAATGGATTGACGAGTGACTACTTTATCTTTGGCAGCATCAATTGCTACAGCAGGTCCAGGTTGACTACTCTAGCAGGCATGTGCACAATAGTTGGACTTGAGTATTTGCTTCTCCATTGGGTCCCTTCTCGGATTTCAGAGATCTTCTTTTGTTCTCTGAGATGGGATAGGGGAATCCACAGCTGGTGGCTGAAAATTGTTTCTGAAAAAATGGTGGGGAACTTCACAATACTATCATGCTGGCCGGACAGAATTATTGAATTGTTTGTCTGCCATTTTTGGTACGGTCTCATGGTGGGGTCCGTGACCTTTGGTTCGCAGTGTGATTGTAATTGTATGGGGCGTCAATTTCCTCTGAAGTGGCTTGTTATCTCAGAAGCCAGGGGATGTGTAATTAGCCCATCCAAGCACACGCTCTTGGAGAAGGCGTTTTCTGGCCGGAACGGTTGCTTGCTAGAATCCATGGTGGATGAGCATTGTGAAAGTCGTTTTCTTCAGTGGAGTCCCTTTTTGGCTAACACATTTTTGTATATTTATACTCTTAGTTTAGTCCTACTAACACTTCCTCAGATTAGACTCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

936

Amino Acids

105.09

Weight (kDa)

7.95

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_CDC20-Fz PF24807 253 - 317 2.3e-06 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd PF25172 266 - 494 1e-14 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 275 - 313 1.6e-07 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 277 - 316 9.6e-07 WDR5 beta-propeller domain
WD40 PF00400 277 - 308 1.3e-08 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 277 - 320 3.6e-07 WDHD1 first WD40 domain
WD40_Gbeta PF25391 360 - 588 1.8e-10 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 370 - 593 2.6e-34 WDR5 beta-propeller domain
WD40_Prp19 PF24814 374 - 502 3.9e-13 Prp19 WD40 domain
WD40 PF00400 376 - 411 2.9e-07 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 377 - 455 1.4e-11 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 378 - 438 1.7e-07 WDR36/Utp21 second beta-propeller domain
WD40_CDC20-Fz PF24807 378 - 461 3.1e-08 CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 381 - 437 7.8e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3 PF25174 384 - 592 8.8e-21 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 389 - 597 1.3e-12 WDR3 second beta-propeller domain
Beta-prop_EML_2 PF23414 396 - 500 2.5e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 399 - 507 5.7e-06 WDR90/POC16, second beta-propeller
WD40 PF00400 417 - 453 1.5e-06 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 427 - 597 1.5e-09 WDHD1 first WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1482
Acc36I ACCTGC 2 cut(s) 2135, 2265
AccB7I CCANNNNNTGG 2 cut(s) 207, 1859
AccBSI CCGCTC 1 cut(s) 1822
AccI GTMKAC 1 cut(s) 1752
AccII CGCG 1 cut(s) 116
AciI CCGC 8 cut(s) 353, 790, 1031, 1415, 1474, 1822, 1947, 2142
AclWI GGATC 7 cut(s) 393, 968, 1176, 1580, 2005, 2061, 2168
AcoI YGGCCR 3 cut(s) 855, 2465, 2659
AcsI RAATTY 6 cut(s) 110, 461, 475, 863, 1362, 1629
AcuI CTGAAG 6 cut(s) 659, 1692, 1964, 2183, 2600, 2702
AcyI GRCGYC 1 cut(s) 2566
AfaI GTAC 4 cut(s) 884, 1529, 2075, 2507
AfiI CCNNNNNNNGG 6 cut(s) 207, 789, 1859, 2121, 2122, 2148
AjnI CCWGG 5 cut(s) 250, 831, 1175, 2279, 2603
AluBI AGCT 7 cut(s) 96, 809, 1445, 2023, 2203, 2214, 2406
AluI AGCT 7 cut(s) 96, 809, 1445, 2023, 2203, 2214, 2406
Alw21I GWGCWC 2 cut(s) 2105, 2309
Alw26I GTCTC 1 cut(s) 2516
Alw44I GTGCAC 1 cut(s) 2305
AlwI GGATC 7 cut(s) 393, 968, 1176, 1580, 2005, 2061, 2168
AlwNI CAGNNNCTG 1 cut(s) 152
Ama87I CYCGRG 1 cut(s) 2012
AoxI GGCC 7 cut(s) 515, 834, 855, 1875, 2009, 2465, 2659
ApaLI GTGCAC 1 cut(s) 2305
ApeKI GCWGC 2 cut(s) 1679, 2256
ApoI RAATTY 6 cut(s) 110, 461, 475, 863, 1362, 1629
ArsI GACNNNNNNTTYG 4 cut(s) 1587, 1619, 2521, 2553
AspLEI GCGC 3 cut(s) 567, 1613, 2195
AspS9I GGNCC 7 cut(s) 515, 675, 835, 2010, 2277, 2344, 2523
AsuC2I CCSGG 1 cut(s) 784
AsuHPI GGTGA 6 cut(s) 39, 911, 985, 1169, 1819, 1935
AsuII TTCGAA 1 cut(s) 1619
AvaI CYCGRG 1 cut(s) 2012
AvaII GGWCC 4 cut(s) 675, 2277, 2344, 2523
BaeGI GKGCMC 1 cut(s) 2309
BalI TGGCCA 1 cut(s) 857
BbsI GAAGAC 1 cut(s) 429
Bbv12I GWGCWC 2 cut(s) 2105, 2309
BbvI GCAGC 2 cut(s) 1691, 2268
BcgI CGANNNNNNTGC 2 cut(s) 653, 687
BciT130I CCWGG 5 cut(s) 252, 833, 1177, 2281, 2605
BclI TGATCA 1 cut(s) 1771
BcnI CCSGG 1 cut(s) 784
BcoDI GTCTC 1 cut(s) 2516
BfaI CTAG 7 cut(s) 33, 342, 887, 1590, 1890, 2294, 2678
BfmI CTRYAG 2 cut(s) 1765, 2269
BfuAI ACCTGC 2 cut(s) 2135, 2265
BglII AGATCT 2 cut(s) 1691, 2364
BisI GCNGC 3 cut(s) 1474, 1680, 2257
BlsI GCNGC 3 cut(s) 1475, 1681, 2258
Bme1390I CCNGG 6 cut(s) 252, 784, 833, 1177, 2281, 2605
Bme18I GGWCC 4 cut(s) 675, 2277, 2344, 2523
BmeT110I CYCGRG 1 cut(s) 2012
BmgT120I GGNCC 7 cut(s) 515, 675, 835, 2010, 2277, 2344, 2523
BmiI GGNNCC 4 cut(s) 1545, 2345, 2346, 2524
BmrFI CCNGG 6 cut(s) 252, 784, 833, 1177, 2281, 2605
BmsI GCATC 6 cut(s) 115, 145, 152, 1232, 1825, 2268
BpiI GAAGAC 1 cut(s) 429
Bpu14I TTCGAA 1 cut(s) 1619
BpuEI CTTGAG 3 cut(s) 1779, 2342, 2786
BpuMI CCSGG 1 cut(s) 784
BsaAI YACGTR 2 cut(s) 1058, 1282
BsaBI GATNNNNATC 1 cut(s) 403
BsaHI GRCGYC 1 cut(s) 2566
BsaI GGTCTC 1 cut(s) 2516
BsaJI CCNNGG 6 cut(s) 250, 251, 1853, 2013, 2604, 2685
BsaXI ACNNNNNCTCC 6 cut(s) 495, 525, 1434, 1464, 2636, 2666
Bsc4I CCNNNNNNNGG 6 cut(s) 207, 789, 1859, 2121, 2122, 2148
Bse118I RCCGGY 1 cut(s) 517
Bse3DI GCAATG 2 cut(s) 1130, 1252
Bse8I GATNNNNATC 1 cut(s) 403
BseBI CCWGG 5 cut(s) 252, 833, 1177, 2281, 2605
BseDI CCNNGG 6 cut(s) 250, 251, 1853, 2013, 2604, 2685
BseGI GGATG 8 cut(s) 297, 977, 1247, 1315, 2158, 2615, 2624, 2698
BseJI GATNNNNATC 1 cut(s) 403
BseLI CCNNNNNNNGG 6 cut(s) 207, 789, 1859, 2121, 2122, 2148
BseMI GCAATG 2 cut(s) 1130, 1252
BseMII CTCAG 7 cut(s) 552, 819, 1679, 1952, 2372, 2610, 2804
BseRI GAGGAG 3 cut(s) 31, 34, 2030
BseSI GKGCMC 1 cut(s) 2309
BseXI GCAGC 2 cut(s) 1691, 2268
BsgI GTGCAG 1 cut(s) 324
Bsh1236I CGCG 1 cut(s) 116
BshFI GGCC 7 cut(s) 517, 836, 857, 1877, 2011, 2467, 2661
BsiHKAI GWGCWC 2 cut(s) 2105, 2309
BsiHKCI CYCGRG 1 cut(s) 2012
BsiSI CCGG 4 cut(s) 518, 783, 2468, 2662
BslFI GGGAC 3 cut(s) 834, 2330, 2712
BslI CCNNNNNNNGG 6 cut(s) 207, 789, 1859, 2121, 2122, 2148
BsmAI GTCTC 1 cut(s) 2516
BsmFI GGGAC 3 cut(s) 834, 2330, 2712
BsmI GAATGC 1 cut(s) 1681
BsnI GGCC 7 cut(s) 517, 836, 857, 1877, 2011, 2467, 2661
Bso31I GGTCTC 1 cut(s) 2516
BsoBI CYCGRG 1 cut(s) 2012
Bsp119I TTCGAA 1 cut(s) 1619
Bsp1286I GDGCHC 2 cut(s) 2105, 2309
Bsp1407I TGTACA 1 cut(s) 1527
Bsp19I CCATGG 2 cut(s) 1853, 2685
BspACI CCGC 8 cut(s) 353, 790, 1031, 1415, 1474, 1822, 1947, 2142
BspANI GGCC 7 cut(s) 517, 836, 857, 1877, 2011, 2467, 2661
BspCNI CTCAG 7 cut(s) 553, 818, 1680, 1953, 2373, 2609, 2803
BspFNI CGCG 1 cut(s) 116
BspLI GGNNCC 4 cut(s) 1545, 2345, 2346, 2524
BspMAI CTGCAG 1 cut(s) 1769
BspMI ACCTGC 2 cut(s) 2135, 2265
BspPI GGATC 7 cut(s) 393, 968, 1176, 1580, 2005, 2061, 2168
BspQI GCTCTTC 1 cut(s) 2202
BspT104I TTCGAA 1 cut(s) 1619
BspTNI GGTCTC 1 cut(s) 2516
BsrBI CCGCTC 1 cut(s) 1822
BsrDI GCAATG 2 cut(s) 1130, 1252
BsrFI RCCGGY 1 cut(s) 517
BsrGI TGTACA 1 cut(s) 1527
BssAI RCCGGY 1 cut(s) 517
BssECI CCNNGG 6 cut(s) 250, 251, 1853, 2013, 2604, 2685
BssNAI GTATAC 1 cut(s) 1753
BssNI GRCGYC 1 cut(s) 2566
BssT1I CCWWGG 2 cut(s) 1853, 2685
Bst1107I GTATAC 1 cut(s) 1753
Bst2UI CCWGG 5 cut(s) 252, 833, 1177, 2281, 2605
Bst4CI ACNGT 8 cut(s) 59, 882, 997, 1200, 1222, 1532, 2510, 2669
Bst6I CTCTTC 6 cut(s) 16, 99, 549, 606, 635, 2202
BstACI GRCGYC 1 cut(s) 2566
BstAPI GCANNNNNTGC 2 cut(s) 1251, 2265
BstAUI TGTACA 1 cut(s) 1527
BstBAI YACGTR 2 cut(s) 1058, 1282
BstBI TTCGAA 1 cut(s) 1619
BstC8I GCNNGC 4 cut(s) 1951, 2299, 2465, 2675
BstDEI CTNAG 9 cut(s) 561, 805, 1688, 1879, 1961, 2381, 2596, 2765, 2790
BstDSI CCRYGG 2 cut(s) 1853, 2685
BstEII GGTNACC 1 cut(s) 2184
BstF5I GGATG 8 cut(s) 297, 977, 1247, 1315, 2158, 2615, 2624, 2698
BstFNI CGCG 1 cut(s) 116
BstHHI GCGC 3 cut(s) 567, 1613, 2195
BstMAI GTCTC 1 cut(s) 2516
BstMWI GCNNNNNNNGC 6 cut(s) 922, 1251, 1350, 1473, 1844, 2265
BstNI CCWGG 5 cut(s) 252, 833, 1177, 2281, 2605
BstNSI RCATGY 4 cut(s) 687, 1089, 1953, 2305
BstPI GGTNACC 1 cut(s) 2184
BstSCI CCNGG 6 cut(s) 250, 782, 831, 1175, 2279, 2603
BstSFI CTRYAG 2 cut(s) 1765, 2269
BstSLI GKGCMC 1 cut(s) 2309
BstUI CGCG 1 cut(s) 116
BstV1I GCAGC 2 cut(s) 1691, 2268
BstV2I GAAGAC 1 cut(s) 429
BstX2I RGATCY 8 cut(s) 398, 973, 1168, 1585, 1691, 1997, 2066, 2364
BstXI CCANNNNNNTGG 1 cut(s) 2180
BstYI RGATCY 8 cut(s) 398, 973, 1168, 1585, 1691, 1997, 2066, 2364
BstZ17I GTATAC 1 cut(s) 1753
BsuRI GGCC 7 cut(s) 517, 836, 857, 1877, 2011, 2467, 2661
BtgI CCRYGG 2 cut(s) 1853, 2685
BtsCI GGATG 8 cut(s) 297, 977, 1247, 1315, 2158, 2615, 2624, 2698
BtsI GCAGTG 2 cut(s) 1774, 2549
BtsIMutI CAGTG 7 cut(s) 153, 538, 1333, 1774, 1830, 2549, 2726
BveI ACCTGC 2 cut(s) 2135, 2265
Cac8I GCNNGC 4 cut(s) 1951, 2299, 2465, 2675
CaiI CAGNNNCTG 1 cut(s) 152
CfoI GCGC 3 cut(s) 567, 1613, 2195
Cfr10I RCCGGY 1 cut(s) 517
Cfr13I GGNCC 7 cut(s) 515, 675, 835, 2010, 2277, 2344, 2523
CseI GACGC 2 cut(s) 257, 2555
Csp6I GTAC 4 cut(s) 883, 1528, 2074, 2506
CviQI GTAC 4 cut(s) 883, 1528, 2074, 2506
DdeI CTNAG 9 cut(s) 561, 805, 1688, 1879, 1961, 2381, 2596, 2765, 2790
DraI TTTAAA 1 cut(s) 2086
EaeI YGGCCR 3 cut(s) 855, 2465, 2659
Eam1104I CTCTTC 6 cut(s) 16, 99, 549, 606, 635, 2202
EarI CTCTTC 6 cut(s) 16, 99, 549, 606, 635, 2202
Eco130I CCWWGG 2 cut(s) 1853, 2685
Eco147I AGGCCT 1 cut(s) 1877
Eco31I GGTCTC 1 cut(s) 2516
Eco32I GATATC 1 cut(s) 829
Eco47I GGWCC 4 cut(s) 675, 2277, 2344, 2523
Eco57I CTGAAG 6 cut(s) 659, 1692, 1964, 2183, 2600, 2702
Eco88I CYCGRG 1 cut(s) 2012
Eco91I GGTNACC 1 cut(s) 2184
EcoO109I RGGNCCY 1 cut(s) 2344
EcoO65I GGTNACC 1 cut(s) 2184
EcoRI GAATTC 3 cut(s) 110, 1362, 1629
EcoRII CCWGG 5 cut(s) 250, 831, 1175, 2279, 2603
EcoRV GATATC 1 cut(s) 829
EcoT14I CCWWGG 2 cut(s) 1853, 2685
EcoT22I ATGCAT 2 cut(s) 2064, 2122
ErhI CCWWGG 2 cut(s) 1853, 2685
FalI AAGNNNNNCTT 2 cut(s) 421, 453
FaqI GGGAC 3 cut(s) 834, 2330, 2712
FauI CCCGC 2 cut(s) 346, 1954
FauNDI CATATG 1 cut(s) 1757
FbaI TGATCA 1 cut(s) 1771
FblI GTMKAC 1 cut(s) 1752
Fnu4HI GCNGC 3 cut(s) 1474, 1680, 2257
FokI GGATG 8 cut(s) 304, 964, 1254, 1322, 2165, 2611, 2622, 2705
Fsp4HI GCNGC 3 cut(s) 1474, 1680, 2257
FspBI CTAG 7 cut(s) 33, 342, 887, 1590, 1890, 2294, 2678
GlaI GCGC 3 cut(s) 566, 1612, 2194
GluI GCNGC 3 cut(s) 1474, 1680, 2257
HaeIII GGCC 7 cut(s) 517, 836, 857, 1877, 2011, 2467, 2661
HapII CCGG 4 cut(s) 518, 783, 2468, 2662
HgaI GACGC 2 cut(s) 257, 2555
HhaI GCGC 3 cut(s) 567, 1613, 2195
Hin1I GRCGYC 1 cut(s) 2566
Hin6I GCGC 3 cut(s) 565, 1611, 2193
HinP1I GCGC 3 cut(s) 565, 1611, 2193
HincII GTYRAC 2 cut(s) 1213, 2286
HindII GTYRAC 2 cut(s) 1213, 2286
HindIII AAGCTT 1 cut(s) 2021
HpaII CCGG 4 cut(s) 518, 783, 2468, 2662
HphI GGTGA 6 cut(s) 39, 911, 985, 1169, 1819, 1935
Hpy166II GTNNAC 6 cut(s) 1123, 1213, 1753, 1827, 2286, 2307
Hpy188III TCNNGA 7 cut(s) 164, 215, 284, 542, 872, 965, 1775
Hpy8I GTNNAC 6 cut(s) 1123, 1213, 1753, 1827, 2286, 2307
Hpy99I CGWCG 1 cut(s) 273
HpyCH4III ACNGT 8 cut(s) 59, 882, 997, 1200, 1222, 1532, 2510, 2669
HpyCH4IV ACGT 2 cut(s) 1057, 1281
HpyF10VI GCNNNNNNNGC 6 cut(s) 922, 1251, 1350, 1473, 1844, 2265
HpyF3I CTNAG 9 cut(s) 561, 805, 1688, 1879, 1961, 2381, 2596, 2765, 2790
HpySE526I ACGT 2 cut(s) 1057, 1281
Hsp92I GRCGYC 1 cut(s) 2566
HspAI GCGC 3 cut(s) 565, 1611, 2193
KflI GGGWCCC 1 cut(s) 2344
Ksp22I TGATCA 1 cut(s) 1771
LguI GCTCTTC 1 cut(s) 2202
LmnI GCTCC 4 cut(s) 93, 265, 1442, 1549
Lsp1109I GCAGC 2 cut(s) 1691, 2268
LweI GCATC 6 cut(s) 115, 145, 152, 1232, 1825, 2268
MaeI CTAG 7 cut(s) 33, 342, 887, 1590, 1890, 2294, 2678
MaeII ACGT 2 cut(s) 1057, 1281
MaeIII GTNAC 8 cut(s) 59, 633, 1282, 1603, 2137, 2184, 2237, 2527
MbiI CCGCTC 1 cut(s) 1822
MfeI CAATTG 3 cut(s) 66, 590, 2263
MflI RGATCY 8 cut(s) 398, 973, 1168, 1585, 1691, 1997, 2066, 2364
MhlI GDGCHC 2 cut(s) 2105, 2309
MlsI TGGCCA 1 cut(s) 857
MluNI TGGCCA 1 cut(s) 857
MlyI GAGTC 4 cut(s) 566, 927, 2734, 2793
MmeI TCCRAC 4 cut(s) 298, 1633, 2051, 2296
Mox20I TGGCCA 1 cut(s) 857
Mph1103I ATGCAT 2 cut(s) 2064, 2122
MscI TGGCCA 1 cut(s) 857
MseI TTAA 3 cut(s) 276, 648, 2085
MslI CAYNNNNRTG 4 cut(s) 1149, 1155, 1948, 2178
Msp20I TGGCCA 1 cut(s) 857
MspA1I CMGCKG 2 cut(s) 2203, 2406
MspI CCGG 4 cut(s) 518, 783, 2468, 2662
MspR9I CCNGG 6 cut(s) 252, 784, 833, 1177, 2281, 2605
MunI CAATTG 3 cut(s) 66, 590, 2263
Mva1269I GAATGC 1 cut(s) 1681
MvaI CCWGG 5 cut(s) 252, 833, 1177, 2281, 2605
MvnI CGCG 1 cut(s) 116
MwoI GCNNNNNNNGC 6 cut(s) 922, 1251, 1350, 1473, 1844, 2265
NciI CCSGG 1 cut(s) 784
NcoI CCATGG 2 cut(s) 1853, 2685
NdeI CATATG 1 cut(s) 1757
NlaIV GGNNCC 4 cut(s) 1545, 2345, 2346, 2524
NmuCI GTSAC 5 cut(s) 1282, 1603, 2137, 2237, 2527
NsiI ATGCAT 2 cut(s) 2064, 2122
NspI RCATGY 4 cut(s) 687, 1089, 1953, 2305
NspV TTCGAA 1 cut(s) 1619
PaeI GCATGC 1 cut(s) 1953
PasI CCCWGGG 1 cut(s) 251
PceI AGGCCT 1 cut(s) 1877
PciSI GCTCTTC 1 cut(s) 2202
PctI GAATGC 1 cut(s) 1681
PfeI GAWTC 8 cut(s) 937, 1000, 1079, 1616, 1742, 1970, 2397, 2681
PflFI GACNNNGTC 1 cut(s) 2047
PflMI CCANNNNNTGG 2 cut(s) 207, 1859
PfoI TCCNGGA 1 cut(s) 782
PkrI GCNGC 3 cut(s) 1475, 1681, 2258
PleI GAGTC 4 cut(s) 565, 926, 2733, 2793
PpsI GAGTC 4 cut(s) 565, 926, 2733, 2793
Ppu21I YACGTR 2 cut(s) 1058, 1282
PpuMI RGGWCCY 1 cut(s) 2344
PsiI TTATAA 1 cut(s) 1482
Psp5II RGGWCCY 1 cut(s) 2344
Psp6I CCWGG 5 cut(s) 250, 831, 1175, 2279, 2603
PspEI GGTNACC 1 cut(s) 2184
PspGI CCWGG 5 cut(s) 250, 831, 1175, 2279, 2603
PspN4I GGNNCC 4 cut(s) 1545, 2345, 2346, 2524
PspPI GGNCC 7 cut(s) 515, 675, 835, 2010, 2277, 2344, 2523
PspPPI RGGWCCY 1 cut(s) 2344
PstI CTGCAG 1 cut(s) 1769
PstNI CAGNNNCTG 1 cut(s) 152
PsuI RGATCY 8 cut(s) 398, 973, 1168, 1585, 1691, 1997, 2066, 2364
PsyI GACNNNGTC 1 cut(s) 2047
PvuII CAGCTG 2 cut(s) 2203, 2406
RsaI GTAC 4 cut(s) 884, 1529, 2075, 2507
RsaNI GTAC 4 cut(s) 883, 1528, 2074, 2506
RseI CAYNNNNRTG 4 cut(s) 1149, 1155, 1948, 2178
SapI GCTCTTC 1 cut(s) 2202
SaqAI TTAA 3 cut(s) 276, 648, 2085
SatI GCNGC 3 cut(s) 1474, 1680, 2257
Sau96I GGNCC 7 cut(s) 515, 675, 835, 2010, 2277, 2344, 2523
SchI GAGTC 4 cut(s) 566, 927, 2734, 2793
ScrFI CCNGG 6 cut(s) 252, 784, 833, 1177, 2281, 2605
SduI GDGCHC 2 cut(s) 2105, 2309
SfaNI GCATC 6 cut(s) 115, 145, 152, 1232, 1825, 2268
SfcI CTRYAG 2 cut(s) 1765, 2269
SfuI TTCGAA 1 cut(s) 1619
SinI GGWCC 4 cut(s) 675, 2277, 2344, 2523
SmiMI CAYNNNNRTG 4 cut(s) 1149, 1155, 1948, 2178
SmlI CTYRAG 3 cut(s) 1794, 2321, 2801
SmoI CTYRAG 3 cut(s) 1794, 2321, 2801
SphI GCATGC 1 cut(s) 1953
SseBI AGGCCT 1 cut(s) 1877
SsiI CCGC 8 cut(s) 353, 790, 1031, 1415, 1474, 1822, 1947, 2142
SspMI CTAG 7 cut(s) 33, 342, 887, 1590, 1890, 2294, 2678
StuI AGGCCT 1 cut(s) 1877
StyD4I CCNGG 6 cut(s) 250, 782, 831, 1175, 2279, 2603
StyI CCWWGG 2 cut(s) 1853, 2685
TaaI ACNGT 8 cut(s) 59, 882, 997, 1200, 1222, 1532, 2510, 2669
TaiI ACGT 2 cut(s) 1060, 1284
TaqI TCGA 4 cut(s) 541, 1569, 1619, 2108
TaqII GACCGA 2 cut(s) 423, 663
TatI WGTACW 2 cut(s) 1527, 2073
TauI GCSGC 1 cut(s) 1476
TfiI GAWTC 8 cut(s) 937, 1000, 1079, 1616, 1742, 1970, 2397, 2681
Tru1I TTAA 3 cut(s) 276, 648, 2085
Tru9I TTAA 3 cut(s) 276, 648, 2085
TscAI CASTG 7 cut(s) 153, 538, 1333, 1774, 1837, 2549, 2726
TseFI GTSAC 5 cut(s) 1282, 1603, 2137, 2237, 2527
TseI GCWGC 2 cut(s) 1679, 2256
Tsp45I GTSAC 5 cut(s) 1282, 1603, 2137, 2237, 2527
TspDTI ATGAA 8 cut(s) 308, 474, 522, 875, 966, 1133, 1625, 2082
TspGWI ACGGA 3 cut(s) 1687, 1831, 2515
TspRI CASTG 7 cut(s) 153, 538, 1333, 1774, 1837, 2549, 2726
Tth111I GACNNNGTC 1 cut(s) 2047
Van91I CCANNNNNTGG 2 cut(s) 207, 1859
VneI GTGCAC 1 cut(s) 2305
VpaK11BI GGWCC 4 cut(s) 675, 2277, 2344, 2523
XapI RAATTY 6 cut(s) 110, 461, 475, 863, 1362, 1629
XceI RCATGY 4 cut(s) 687, 1089, 1953, 2305
XmiI GTMKAC 1 cut(s) 1752
XspI CTAG 7 cut(s) 33, 342, 887, 1590, 1890, 2294, 2678
Zsp2I ATGCAT 2 cut(s) 2064, 2122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.