Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0013507

Physical Location & Seq

Genomic Coordinates Reverse (-)

624709 .. 629955

Gene Structure 5247 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1003800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGCACTTTCTCTCAGATTACACAACCTTCTTTCCCCAACCTTCAGACCCAAAACTTTATCATCATCATCATCATCAAATGCCACTCTATCTCCTCCAAACCCATCTCTCTCACTCCTCTCCTCCTCTCCCCTTCCACACCTCCCACTCAGAACCTCACACTCCCTCGCCATTAGAGCCGCTTCCTCCTCCTCTTCTTCCCCAACCACGGTTGCTGATCCACAGGGCATCAAGATTAATTTGGTTCCCACTAAACCAATCGAAGGTCAGAAGACTGGAACCAGTGGTCTCCGAAAAAAGGTGAAAGTTTTTCAGCAAGAAAATTACCTTGCAAATTGGATTCAGGCTTTATTTGATTCATTGCCGCCCGAGGATTACAAGAATGGGTTATTGGTGTTAGGAGGTGATGGTCGTTACTTTAATCGTGAAGCTGCACAGATTATTATCAAAATTGCCGCCGGGAACGGTGTTGGGAAAATTTTGGTTGGCAAGGAAGGAATTTTGTCAACACCTGCCGTTTCTGCAGCCAATGGGGGATTTATTATGAGTGCAAGCCACAATCCTGGTGGGCCTGATTATGATTGGGGTATTAAGTTTAATTACAACAGTGGCCAACCTGCACCTGAGTCCATCACAGACATGATTTACGGAAACACTCTTTCTATCACTGAAATAAAGATAGCAGATATTGCTGATGTTGACCTATCTACTCTCGGAGTTGTAAAGTATGGAAAATTCAGTGTTGAAGTTGTTGATCCGGTTTCTGACTATTTGGAATTGTTGGAGAACGTATTTGATTTCCAACTTATCAAAAGTCTTCTACAGTTAGACTTCAGGTTTATGTTTGATGCAATGCATGCTGTTACTGGTGCTTATGCGAAACCCATCTTTGTGGATAAGCTCGGAGCCAGTCCGGATTCAATTTCAAATGGAGTGCCTCTGGAGGATTTTGGTCATGGCCATCCAGATCCTAATCTTACATATGCCAAGGATTTGGTCAACATTCTGTATAGCGAAAATGGACCTGACTTTGGGGCTGCTAGTGATGGGGATGGTGATAGGAACATGATTCTTGGTAGAGGCTTTTTCGTTACTCCTTCAGACTCTGTTGCAATTATTGCAGCCAATGCCCAAGAAGCTATTCCATACTTCCGGAGTGGCCCCAAGGGATTAGCTCGATCCATGCCAACAAGTGGTGCACTTGATCGTGTTGCTGAAAAATTGAAGCTTCCTTTCTTTGAGGTTCCCACTGGTTGGAAGTTCTTTGGGAATCTTATGGATGCTGGGAAGTTATCTATATGCGGGGAAGAGAGTTTTGGAACAGGTTCTGATCACATCCGCGAGAAAGATGGCATATGGGCAGTTTTAGCTTGGCTTTCAATCATTGCATATTGTAACAAAGACAAAAAACCTGGGGAGAAGTTGGTCTCTGTTGCAGACGTCGTGAAGAAACACTGGGCAACCTATGGAAGAAATTTCTTTTCTCGATATGACTATGAAGAATGCAAGTCTGCAGGTGCCAACAAAATGATAGATTATCTTCGAGAATTGATCTCTAGCAGCAAGACCGGTGACAAGTACGGAAATTACATTCTCCAATTTGCTGATGACTTTACATACACTGATCCTGTTGATGGAAGTGTGGCGTCAAAGCAAGGTGTTCGGTTTGTTTTTACAGATGGATCAAGGATATCATATCGCTTATCAGGAACGGGTTCAGCAGGAGCAACTGTTCGAATTTACATTGAACAATATGAACCAGATGCCTCTAAACATGACGTGGATGCCCAAACGGCACTAAAGCCATTGATAGATTTGGCGTTGTCTGTATCGAAGCTGAAGGAATTCACTGGAAGGGAGAAGCCCACAGTCATCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0004614 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0005982 GO:0005996 GO:0006006 GO:0006012 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009250 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009581 GO:0009582 GO:0009590 GO:0009605 GO:0009628 GO:0009629 GO:0009941 GO:0009987 GO:0010319 GO:0015980 GO:0016051 GO:0016052 GO:0016853 GO:0016866 GO:0016868 GO:0019252 GO:0019318 GO:0019320 GO:0019388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046365 GO:0048046 GO:0050896 GO:0051606 GO:0055114 GO:0071704 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00052 ko00230 ko00500 ko00520 ko00521 ko01100 ko01110 ko01120 ko01130 map00010 map00030 map00052 map00230 map00500 map00520 map00521 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

PGM_PMM_I PGM_PMM_II PGM_PMM_III PGM_PMM_IV

Protein Analysis

627

Amino Acids

67.74

Weight (kDa)

6.0

Isoelectric Point (pI)

31.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PGM_PMM_I	PF02878	90 - 224	3e-27	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II	PF02879	256 - 358	6.8e-12	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III	PF02880	367 - 473	9.5e-22	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM1_C_vert_fung	PF24947	491 - 623	1.4e-48	Phosphoglucomutase-1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51820
fragaria_vesca	FvH4_7g28680 FvH4_7g28680
malus_domestica	MD00G1003800.v1.1 MD01G1192300.v1.1
prunus_persica	Prupe.2G286900_v2.0.a1
pyrus_communis	pycom01g20350 pycom07g23920
rosa_chinensis	RchiOBHm_Chr1g0376171
rosa_laevigata	RLG00000026623
rosa_multiflora	Rmu_ssc0000116.1_g000052
rosa_roxburghii	Rroxscaffold_4G00282330
rosa_rugosa	Rorug01G0394200
rosa_samantha	Rh1AG405800 Rh1BG369500 Rh1CG382200 Rh1DG399100
rosa_wichuraiana	Rw1G036000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	520, 1505
AatII	GACGTC	1 cut(s)	1443
Acc36I	ACCTGC	3 cut(s)	520, 625, 1505
AccB1I	GGYRCC	1 cut(s)	1517
AccB7I	CCANNNNNTGG	2 cut(s)	1193, 1254
AccII	CGCG	1 cut(s)	1341
AccIII	TCCGGA	2 cut(s)	913, 1152
AciI	CCGC	5 cut(s)	180, 365, 456, 1302, 1339
AclWI	GGATC	6 cut(s)	212, 749, 962, 1173, 1619, 1690
AcoI	YGGCCR	2 cut(s)	610, 958
AcsI	RAATTY	6 cut(s)	477, 498, 734, 1474, 1737, 1844
AcuI	CTGAAG	4 cut(s)	28, 817, 1083, 1859
AcyI	GRCGYC	2 cut(s)	1440, 1646
AfaI	GTAC	1 cut(s)	1580
AfiI	CCNNNNNNNGG	7 cut(s)	208, 263, 298, 1031, 1193, 1254, 1634
AgeI	ACCGGT	1 cut(s)	1568
AgsI	TTSAA	6 cut(s)	746, 921, 927, 1225, 1380, 1748
AjiI	CACGTC	1 cut(s)	1780
AjnI	CCWGG	2 cut(s)	562, 1411
AjuI	GAANNNNNNNTTGG	6 cut(s)	374, 406, 1125, 1157, 1299, 1331
AloI	GAACNNNNNNTCC	2 cut(s)	1716, 1748
AluBI	AGCT	7 cut(s)	431, 901, 1139, 1175, 1228, 1370, 1837
AluI	AGCT	7 cut(s)	431, 901, 1139, 1175, 1228, 1370, 1837
Alw21I	GWGCWC	1 cut(s)	1201
Alw26I	GTCTC	2 cut(s)	293, 1432
Alw44I	GTGCAC	1 cut(s)	1197
AlwI	GGATC	6 cut(s)	212, 749, 962, 1173, 1619, 1690
AlwNI	CAGNNNCTG	2 cut(s)	1106, 1328
Ama87I	CYCGRG	1 cut(s)	368
Aor13HI	TCCGGA	2 cut(s)	913, 1152
AoxI	GGCC	4 cut(s)	569, 610, 958, 1159
ApaLI	GTGCAC	1 cut(s)	1197
ApeKI	GCWGC	5 cut(s)	431, 524, 1037, 1121, 1560
ApoI	RAATTY	6 cut(s)	477, 498, 734, 1474, 1737, 1844
AseI	ATTAAT	1 cut(s)	237
AsiGI	ACCGGT	1 cut(s)	1568
Asp700I	GAANNNNTTC	4 cut(s)	1140, 1324, 1714, 1844
AspS9I	GGNCC	3 cut(s)	569, 1022, 1160
AsuC2I	CCSGG	1 cut(s)	460
AsuHPI	GGTGA	4 cut(s)	313, 416, 1067, 1583
AsuII	TTCGAA	1 cut(s)	1735
AvaI	CYCGRG	1 cut(s)	368
AvaII	GGWCC	1 cut(s)	1022
BaeGI	GKGCMC	1 cut(s)	1201
BalI	TGGCCA	2 cut(s)	612, 960
BanI	GGYRCC	1 cut(s)	1517
BbsI	GAAGAC	2 cut(s)	278, 809
Bbv12I	GWGCWC	1 cut(s)	1201
BbvI	GCAGC	5 cut(s)	418, 536, 1024, 1133, 1572
BceAI	ACGGC	2 cut(s)	500, 1809
BcgI	CGANNNNNNTGC	2 cut(s)	1643, 1677
BciT130I	CCWGG	2 cut(s)	564, 1413
BclI	TGATCA	1 cut(s)	1330
BcnI	CCSGG	1 cut(s)	460
BcoDI	GTCTC	2 cut(s)	293, 1432
BfaI	CTAG	2 cut(s)	1041, 1557
BfmI	CTRYAG	3 cut(s)	522, 821, 1512
BfuAI	ACCTGC	3 cut(s)	520, 625, 1505
BglI	GCCNNNNNGGC	1 cut(s)	1793
BisI	GCNGC	8 cut(s)	180, 365, 432, 456, 525, 1038, 1122, 1561
BlsI	GCNGC	8 cut(s)	181, 366, 433, 457, 526, 1039, 1123, 1562
Bme1390I	CCNGG	3 cut(s)	460, 564, 1413
Bme18I	GGWCC	1 cut(s)	1022
BmeT110I	CYCGRG	1 cut(s)	368
BmgBI	CACGTC	1 cut(s)	1780
BmgT120I	GGNCC	3 cut(s)	569, 1022, 1160
BmiI	GGNNCC	6 cut(s)	246, 280, 907, 1162, 1245, 1519
BmrFI	CCNGG	3 cut(s)	460, 564, 1413
BmrI	ACTGGG	1 cut(s)	1465
BmsI	GCATC	5 cut(s)	237, 838, 1270, 1753, 1774
BmuI	ACTGGG	1 cut(s)	1465
BpiI	GAAGAC	2 cut(s)	278, 809
BpmI	CTGGAG	1 cut(s)	962
Bpu14I	TTCGAA	1 cut(s)	1735
BpuMI	CCSGG	1 cut(s)	460
BsaBI	GATNNNNATC	2 cut(s)	443, 972
BsaHI	GRCGYC	2 cut(s)	1440, 1646
BsaI	GGTCTC	2 cut(s)	293, 1432
BsaJI	CCNNGG	5 cut(s)	207, 369, 987, 1164, 1412
BsaWI	WCCGGW	4 cut(s)	757, 913, 1152, 1568
BsaXI	ACNNNNNCTCC	4 cut(s)	76, 106, 1716, 1746
Bsc4I	CCNNNNNNNGG	7 cut(s)	208, 263, 298, 1031, 1193, 1254, 1634
Bse118I	RCCGGY	1 cut(s)	1568
Bse1I	ACTGG	7 cut(s)	280, 282, 871, 909, 1255, 1460, 1855
Bse3DI	GCAATG	3 cut(s)	359, 858, 1383
Bse8I	GATNNNNATC	2 cut(s)	443, 972
BseAI	TCCGGA	2 cut(s)	913, 1152
BseBI	CCWGG	2 cut(s)	564, 1413
BseDI	CCNNGG	5 cut(s)	207, 369, 987, 1164, 1412
BseGI	GGATG	5 cut(s)	961, 1057, 1285, 1335, 1789
BseJI	GATNNNNATC	2 cut(s)	443, 972
BseLI	CCNNNNNNNGG	7 cut(s)	208, 263, 298, 1031, 1193, 1254, 1634
BseMI	GCAATG	3 cut(s)	359, 858, 1383
BseMII	CTCAG	3 cut(s)	28, 163, 615
BseNI	ACTGG	7 cut(s)	280, 282, 871, 909, 1255, 1460, 1855
BseRI	GAGGAG	6 cut(s)	84, 107, 112, 115, 178, 181
BseSI	GKGCMC	1 cut(s)	1201
BseXI	GCAGC	5 cut(s)	418, 536, 1024, 1133, 1572
BseYI	CCCAGC	1 cut(s)	1283
BsgI	GTGCAG	2 cut(s)	417, 603
Bsh1236I	CGCG	1 cut(s)	1341
BshFI	GGCC	4 cut(s)	571, 612, 960, 1161
BshNI	GGYRCC	1 cut(s)	1517
BshTI	ACCGGT	1 cut(s)	1568
BsiHKAI	GWGCWC	1 cut(s)	1201
BsiHKCI	CYCGRG	1 cut(s)	368
BsiSI	CCGG	5 cut(s)	459, 758, 914, 1153, 1569
BslI	CCNNNNNNNGG	7 cut(s)	208, 263, 298, 1031, 1193, 1254, 1634
BsmAI	GTCTC	2 cut(s)	293, 1432
BsmI	GAATGC	1 cut(s)	1508
BsnI	GGCC	4 cut(s)	571, 612, 960, 1161
Bso31I	GGTCTC	2 cut(s)	293, 1432
BsoBI	CYCGRG	1 cut(s)	368
Bsp119I	TTCGAA	1 cut(s)	1735
Bsp1286I	GDGCHC	1 cut(s)	1201
Bsp13I	TCCGGA	2 cut(s)	913, 1152
Bsp143I	GATC	9 cut(s)	217, 754, 967, 1178, 1204, 1330, 1551, 1624, 1682
BspACI	CCGC	5 cut(s)	180, 365, 456, 1302, 1339
BspANI	GGCC	4 cut(s)	571, 612, 960, 1161
BspCNI	CTCAG	3 cut(s)	27, 162, 616
BspEI	TCCGGA	2 cut(s)	913, 1152
BspFNI	CGCG	1 cut(s)	1341
BspLI	GGNNCC	6 cut(s)	246, 280, 907, 1162, 1245, 1519
BspMAI	CTGCAG	2 cut(s)	526, 1516
BspMI	ACCTGC	3 cut(s)	520, 625, 1505
BspPI	GGATC	6 cut(s)	212, 749, 962, 1173, 1619, 1690
BspT104I	TTCGAA	1 cut(s)	1735
BspT107I	GGYRCC	1 cut(s)	1517
BspTNI	GGTCTC	2 cut(s)	293, 1432
BsrDI	GCAATG	3 cut(s)	359, 858, 1383
BsrFI	RCCGGY	1 cut(s)	1568
BsrI	ACTGG	7 cut(s)	280, 282, 871, 909, 1255, 1460, 1855
BssAI	RCCGGY	1 cut(s)	1568
BssECI	CCNNGG	5 cut(s)	207, 369, 987, 1164, 1412
BssMI	GATC	9 cut(s)	217, 754, 967, 1178, 1204, 1330, 1551, 1624, 1682
BssNI	GRCGYC	2 cut(s)	1440, 1646
BssT1I	CCWWGG	2 cut(s)	987, 1164
Bst2UI	CCWGG	2 cut(s)	564, 1413
Bst4CI	ACNGT	6 cut(s)	211, 467, 608, 825, 1732, 1870
Bst6I	CTCTTC	2 cut(s)	199, 1302
BstACI	GRCGYC	2 cut(s)	1440, 1646
BstAPI	GCANNNNNTGC	4 cut(s)	689, 857, 1118, 1127
BstBI	TTCGAA	1 cut(s)	1735
BstC8I	GCNNGC	2 cut(s)	553, 858
BstDEI	CTNAG	3 cut(s)	14, 149, 624
BstDSI	CCRYGG	1 cut(s)	207
BstF5I	GGATG	5 cut(s)	961, 1057, 1285, 1335, 1789
BstFNI	CGCG	1 cut(s)	1341
BstKTI	GATC	9 cut(s)	220, 757, 970, 1181, 1207, 1333, 1554, 1627, 1685
BstMAI	GTCTC	2 cut(s)	293, 1432
BstMBI	GATC	9 cut(s)	217, 754, 967, 1178, 1204, 1330, 1551, 1624, 1682
BstMWI	GCNNNNNNNGC	9 cut(s)	176, 521, 689, 857, 1118, 1127, 1136, 1367, 1793
BstNI	CCWGG	2 cut(s)	564, 1413
BstNSI	RCATGY	1 cut(s)	860
BstSCI	CCNGG	3 cut(s)	458, 562, 1411
BstSFI	CTRYAG	3 cut(s)	522, 821, 1512
BstSLI	GKGCMC	1 cut(s)	1201
BstUI	CGCG	1 cut(s)	1341
BstV1I	GCAGC	5 cut(s)	418, 536, 1024, 1133, 1572
BstV2I	GAAGAC	2 cut(s)	278, 809
BstX2I	RGATCY	1 cut(s)	967
BstXI	CCANNNNNNTGG	3 cut(s)	563, 892, 994
BstYI	RGATCY	1 cut(s)	967
BsuRI	GGCC	4 cut(s)	571, 612, 960, 1161
BtgI	CCRYGG	1 cut(s)	207
BtrI	CACGTC	1 cut(s)	1780
BtsCI	GGATG	5 cut(s)	961, 1057, 1285, 1335, 1789
BtsIMutI	CAGTG	8 cut(s)	289, 613, 666, 745, 1248, 1453, 1620, 1848
BveI	ACCTGC	3 cut(s)	520, 625, 1505
Cac8I	GCNNGC	2 cut(s)	553, 858
CaiI	CAGNNNCTG	2 cut(s)	1106, 1328
Cfr10I	RCCGGY	1 cut(s)	1568
Cfr13I	GGNCC	3 cut(s)	569, 1022, 1160
CseI	GACGC	1 cut(s)	1635
Csp6I	GTAC	1 cut(s)	1579
CspAI	ACCGGT	1 cut(s)	1568
CspCI	CAANNNNNGTGG	2 cut(s)	547, 582
CviAII	CATG	7 cut(s)	640, 857, 956, 1066, 1183, 1775, 1878
CviQI	GTAC	1 cut(s)	1579
DdeI	CTNAG	3 cut(s)	14, 149, 624
DpnI	GATC	9 cut(s)	219, 756, 969, 1180, 1206, 1332, 1553, 1626, 1684
DpnII	GATC	9 cut(s)	217, 754, 967, 1178, 1204, 1330, 1551, 1624, 1682
EaeI	YGGCCR	2 cut(s)	610, 958
Eam1104I	CTCTTC	2 cut(s)	199, 1302
EarI	CTCTTC	2 cut(s)	199, 1302
Eco130I	CCWWGG	2 cut(s)	987, 1164
Eco31I	GGTCTC	2 cut(s)	293, 1432
Eco32I	GATATC	1 cut(s)	1692
Eco47I	GGWCC	1 cut(s)	1022
Eco57I	CTGAAG	4 cut(s)	28, 817, 1083, 1859
Eco88I	CYCGRG	1 cut(s)	368
EcoRI	GAATTC	1 cut(s)	1844
EcoRII	CCWGG	2 cut(s)	562, 1411
EcoRV	GATATC	1 cut(s)	1692
EcoT14I	CCWWGG	2 cut(s)	987, 1164
EcoT22I	ATGCAT	1 cut(s)	858
ErhI	CCWWGG	2 cut(s)	987, 1164
FaeI	CATG	7 cut(s)	643, 860, 959, 1069, 1186, 1778, 1881
FatI	CATG	7 cut(s)	639, 856, 955, 1065, 1182, 1774, 1877
FauI	CCCGC	1 cut(s)	1295
FauNDI	CATATG	2 cut(s)	982, 1355
FbaI	TGATCA	1 cut(s)	1330
Fnu4HI	GCNGC	8 cut(s)	180, 365, 432, 456, 525, 1038, 1122, 1561
FokI	GGATG	5 cut(s)	948, 1064, 1292, 1322, 1796
Fsp4HI	GCNGC	8 cut(s)	180, 365, 432, 456, 525, 1038, 1122, 1561
FspBI	CTAG	2 cut(s)	1041, 1557
GluI	GCNGC	8 cut(s)	180, 365, 432, 456, 525, 1038, 1122, 1561
GsaI	CCCAGC	1 cut(s)	1287
GsuI	CTGGAG	1 cut(s)	962
HaeIII	GGCC	4 cut(s)	571, 612, 960, 1161
HapII	CCGG	5 cut(s)	459, 758, 914, 1153, 1569
HgaI	GACGC	1 cut(s)	1635
Hin1I	GRCGYC	2 cut(s)	1440, 1646
Hin1II	CATG	7 cut(s)	643, 860, 959, 1069, 1186, 1778, 1881
HincII	GTYRAC	3 cut(s)	507, 700, 1000
HindII	GTYRAC	3 cut(s)	507, 700, 1000
HindIII	AAGCTT	1 cut(s)	1226
HinfI	GANTC	7 cut(s)	340, 356, 626, 917, 1069, 1103, 1270
HpaII	CCGG	5 cut(s)	459, 758, 914, 1153, 1569
HphI	GGTGA	4 cut(s)	313, 416, 1067, 1583
Hpy166II	GTNNAC	4 cut(s)	507, 700, 1000, 1199
Hpy8I	GTNNAC	4 cut(s)	507, 700, 1000, 1199
Hpy99I	CGWCG	1 cut(s)	1445
HpyAV	CCTTC	8 cut(s)	38, 52, 143, 257, 488, 1107, 1834, 1848
HpyCH4III	ACNGT	6 cut(s)	211, 467, 608, 825, 1732, 1870
HpyCH4IV	ACGT	3 cut(s)	789, 1440, 1779
HpyF10VI	GCNNNNNNNGC	9 cut(s)	176, 521, 689, 857, 1118, 1127, 1136, 1367, 1793
HpyF3I	CTNAG	3 cut(s)	14, 149, 624
HpySE526I	ACGT	3 cut(s)	789, 1440, 1779
Hsp92I	GRCGYC	2 cut(s)	1440, 1646
Hsp92II	CATG	7 cut(s)	643, 860, 959, 1069, 1186, 1778, 1881
Kpn2I	TCCGGA	2 cut(s)	913, 1152
Ksp22I	TGATCA	1 cut(s)	1330
Kzo9I	GATC	9 cut(s)	217, 754, 967, 1178, 1204, 1330, 1551, 1624, 1682
LmnI	GCTCC	2 cut(s)	905, 1724
Lsp1109I	GCAGC	5 cut(s)	418, 536, 1024, 1133, 1572
LweI	GCATC	5 cut(s)	237, 838, 1270, 1753, 1774
MaeI	CTAG	2 cut(s)	1041, 1557
MaeII	ACGT	3 cut(s)	789, 1440, 1779
MaeIII	GTNAC	5 cut(s)	413, 862, 1090, 1394, 1571
MalI	GATC	9 cut(s)	219, 756, 969, 1180, 1206, 1332, 1553, 1626, 1684
MboI	GATC	9 cut(s)	217, 754, 967, 1178, 1204, 1330, 1551, 1624, 1682
MboII	GAAGA	9 cut(s)	186, 189, 283, 809, 1319, 1459, 1482, 1511, 1532
MflI	RGATCY	1 cut(s)	967
MhlI	GDGCHC	1 cut(s)	1201
MlsI	TGGCCA	2 cut(s)	612, 960
MluNI	TGGCCA	2 cut(s)	612, 960
MlyI	GAGTC	2 cut(s)	635, 1097
MmeI	TCCRAC	3 cut(s)	762, 826, 1235
Mox20I	TGGCCA	2 cut(s)	612, 960
Mph1103I	ATGCAT	1 cut(s)	858
MroI	TCCGGA	2 cut(s)	913, 1152
MroXI	GAANNNNTTC	4 cut(s)	1140, 1324, 1714, 1844
MscI	TGGCCA	2 cut(s)	612, 960
MseI	TTAA	4 cut(s)	237, 420, 591, 597
MslI	CAYNNNNRTG	2 cut(s)	638, 890
Msp20I	TGGCCA	2 cut(s)	612, 960
MspI	CCGG	5 cut(s)	459, 758, 914, 1153, 1569
MspR9I	CCNGG	3 cut(s)	460, 564, 1413
Mva1269I	GAATGC	1 cut(s)	1508
MvaI	CCWGG	2 cut(s)	564, 1413
MvnI	CGCG	1 cut(s)	1341
MwoI	GCNNNNNNNGC	9 cut(s)	176, 521, 689, 857, 1118, 1127, 1136, 1367, 1793
NciI	CCSGG	1 cut(s)	460
NdeI	CATATG	2 cut(s)	982, 1355
NdeII	GATC	9 cut(s)	217, 754, 967, 1178, 1204, 1330, 1551, 1624, 1682
NlaIII	CATG	7 cut(s)	643, 860, 959, 1069, 1186, 1778, 1881
NlaIV	GGNNCC	6 cut(s)	246, 280, 907, 1162, 1245, 1519
NmuCI	GTSAC	1 cut(s)	1571
NsiI	ATGCAT	1 cut(s)	858
NspI	RCATGY	1 cut(s)	860
NspV	TTCGAA	1 cut(s)	1735
PaeI	GCATGC	1 cut(s)	860
PaqCI	CACCTGC	2 cut(s)	520, 1505
PctI	GAATGC	1 cut(s)	1508
PdmI	GAANNNNTTC	4 cut(s)	1140, 1324, 1714, 1844
PfeI	GAWTC	5 cut(s)	340, 356, 917, 1069, 1270
PflMI	CCANNNNNTGG	2 cut(s)	1193, 1254
PinAI	ACCGGT	1 cut(s)	1568
PkrI	GCNGC	8 cut(s)	181, 366, 433, 457, 526, 1039, 1123, 1562
PleI	GAGTC	2 cut(s)	634, 1097
PpsI	GAGTC	2 cut(s)	634, 1097
PshBI	ATTAAT	1 cut(s)	237
Psp6I	CCWGG	2 cut(s)	562, 1411
PspFI	CCCAGC	1 cut(s)	1283
PspGI	CCWGG	2 cut(s)	562, 1411
PspN4I	GGNNCC	6 cut(s)	246, 280, 907, 1162, 1245, 1519
PspPI	GGNCC	3 cut(s)	569, 1022, 1160
PstI	CTGCAG	2 cut(s)	526, 1516
PstNI	CAGNNNCTG	2 cut(s)	1106, 1328
PsuI	RGATCY	1 cut(s)	967
RsaI	GTAC	1 cut(s)	1580
RsaNI	GTAC	1 cut(s)	1579
RseI	CAYNNNNRTG	2 cut(s)	638, 890
SaqAI	TTAA	4 cut(s)	237, 420, 591, 597
SatI	GCNGC	8 cut(s)	180, 365, 432, 456, 525, 1038, 1122, 1561
Sau3AI	GATC	9 cut(s)	217, 754, 967, 1178, 1204, 1330, 1551, 1624, 1682
Sau96I	GGNCC	3 cut(s)	569, 1022, 1160
SchI	GAGTC	2 cut(s)	635, 1097
ScrFI	CCNGG	3 cut(s)	460, 564, 1413
SduI	GDGCHC	1 cut(s)	1201
SfaNI	GCATC	5 cut(s)	237, 838, 1270, 1753, 1774
SfcI	CTRYAG	3 cut(s)	522, 821, 1512
SfuI	TTCGAA	1 cut(s)	1735
SinI	GGWCC	1 cut(s)	1022
SmiMI	CAYNNNNRTG	2 cut(s)	638, 890
SphI	GCATGC	1 cut(s)	860
SsiI	CCGC	5 cut(s)	180, 365, 456, 1302, 1339
SspMI	CTAG	2 cut(s)	1041, 1557
StyD4I	CCNGG	3 cut(s)	458, 562, 1411
StyI	CCWWGG	2 cut(s)	987, 1164
TaaI	ACNGT	6 cut(s)	211, 467, 608, 825, 1732, 1870
TaiI	ACGT	3 cut(s)	792, 1443, 1782
TaqI	TCGA	6 cut(s)	261, 1177, 1486, 1543, 1735, 1832
TauI	GCSGC	3 cut(s)	182, 367, 458
TfiI	GAWTC	5 cut(s)	340, 356, 917, 1069, 1270
Tru1I	TTAA	4 cut(s)	237, 420, 591, 597
Tru9I	TTAA	4 cut(s)	237, 420, 591, 597
TscAI	CASTG	8 cut(s)	289, 613, 673, 745, 1255, 1460, 1627, 1855
TseFI	GTSAC	1 cut(s)	1571
TseI	GCWGC	5 cut(s)	431, 524, 1037, 1121, 1560
Tsp45I	GTSAC	1 cut(s)	1571
TspDTI	ATGAA	3 cut(s)	348, 1512, 1770
TspGWI	ACGGA	2 cut(s)	663, 1596
TspRI	CASTG	8 cut(s)	289, 613, 673, 745, 1255, 1460, 1627, 1855
Van91I	CCANNNNNTGG	2 cut(s)	1193, 1254
VneI	GTGCAC	1 cut(s)	1197
VpaK11BI	GGWCC	1 cut(s)	1022
VspI	ATTAAT	1 cut(s)	237
XapI	RAATTY	6 cut(s)	477, 498, 734, 1474, 1737, 1844
XceI	RCATGY	1 cut(s)	860
XcmI	CCANNNNNNNNNTGG	1 cut(s)	563
XmnI	GAANNNNTTC	4 cut(s)	1140, 1324, 1714, 1844
XspI	CTAG	2 cut(s)	1041, 1557
ZraI	GACGTC	1 cut(s)	1441
Zsp2I	ATGCAT	1 cut(s)	858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.