Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0013507

Physical Location & Seq

Genomic Coordinates Reverse (-)

63387628 .. 63393161

Gene Structure 5534 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG405800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGGCACTTTCTCTCAGACTACACACCCTTCTCTCCACCACTTCCAGACCCAACTTTTCATCAAATGCCACTCTCACTCCTCCAAACCCATCTCTCTCTCTCTTCTCCTCCTCCTCCTCCTCCTCACTTCTTCCCCACCACCTCCCTCTCAGAACCCCACACTCCCTCACCGTCAAAGCCGCCTCTTCTCCAGCAACCGTAGCAGAGCCCAAGGGCATCAAGATTAATTTGGTTCCCACCAAACCGATCGAAGGCCAGAAGACCGGAACCAGCGGTCTCCGAAAGAAGGTGAAAGTTTTTCAGCAAGAGAATTACCTTGCCAATTGGATCCAGGCGTTATTTGATTCATTGCCACCAGAAGATTACAAGGATGGTTTACTGGTGTTGGGAGGTGATGGTCGTTACTTTAATCGTGAAGCTGCACAGATTATCATCAAAATTGCCGCAGGGAATGGTGTTGGGAAAATTTTGGTTGGCAAGGAAGGAATTTTGTCAACACCTGCTGTTTCTGCTGTTATCCGCAAGAGGAAGGCCAATGGTGGTTTTATAATGAGTGCAAGCCACAATCCTGGTGGACCTGATTATGATTGGGGTATTAAGTTTAATTACAGTAGCGGACAACCTGCACCTGAGTCCATCACTGACAAGATTTATGGAAACACTCTTTCTATCTCGGAAATAAAGATAGCAGACATTGCTGATGTTGACTTATCTTCTGTTGGAGTTATAAACTATGGAAACTTCACTGTTGAAGTTATTGATCCAGTTACTGACTACTTGGAACTAATGGAGAATGTATTTGATTTCCAGCTTATCAAAAATCTTCTGAAGTTAGACTTCAGGTTTCTATTTGATGCCATGCATGCTGTTACTGGTGCTTATGCAAAACCCATCTTTGTGGATAAACTGGGAGCCACTCCGGATTCAATTTCAAATGGAGTGCCTCTAGAGGATTTTGGGCATGGTCATCCAGATCCTAATCTCACGTATGCTAAGGATCTCGTCGATGTTTTGTACAGTAAAAATGGACCCGACTTTGGAGCCGCAAGTGATGGGGATGGTGATAGAAACATGATTCTTGGTAAAGGCTTTTTTGTTACTCCTTCAGACTCTGTTGCAATTATCGCAGCCAATGCTCAAGAAACTATTCCATATTTTCAGAGTGGCCCCAAGGGATTAGCACGGTCCATGCCAACAAGCGGTGCACTTGATCGTGTTGCTGAAAAGTTAAAGCTTCCTTTCTTTGAGGTTCCCACTGGTTGGAAGTTCTTTGGGAATCTTATGGATGCTGGGAAGTTATCTATATGTGGGGAAGAGAGTTTTGGAACAGGGTCTGACCACATCCGCGAGAAGGATGGCATATGGGCTGTCTTAGCTTGGCTTTCTATCATTGCATATCGGAACAAAGACAAAAAACCTGGCGAGAAGTTGGTCTCTGTTGCAGACGTTGTGAAGGAACACTGGGCAACCTATGGAAGAAATTTCTTTTCTCGATATGACTATGAAGAATGTGCATCTGAAGGTGCCAATAAGATGATAAATCATCTTAGAGAATTAATCTCTAGGAGCAAGCCTGGTGAAAAGTTTGGAAATTATGCTCTCAAATTTGCCGATGACTTCACCTATACTGATCCTGTTGATGAAAGTGTGGCATCAAAGCAAGGTGTTCGGTTTGTTTTTACTGATGGATCGAGGATCATATTTCGTTTATCAGGAACAGGTTCAGCAGGAGCAACTATTCGAATATACATTGAACAGTATGAACCAGATGTCTCCAAACATGATGAGGACGCCCAAGTGGCACTGAAACCCTTAATAGATTTGGCATTGTCTCTATCGAAGCTGAAGGAGTTCACTGGAAGGGAGAAGCCCACAGTCATCACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0004614 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0005982 GO:0005996 GO:0006006 GO:0006012 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009250 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009581 GO:0009582 GO:0009590 GO:0009605 GO:0009628 GO:0009629 GO:0009941 GO:0009987 GO:0010319 GO:0015980 GO:0016051 GO:0016052 GO:0016853 GO:0016866 GO:0016868 GO:0019252 GO:0019318 GO:0019320 GO:0019388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046365 GO:0048046 GO:0050896 GO:0051606 GO:0055114 GO:0071704 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00052 ko00230 ko00500 ko00520 ko00521 ko01100 ko01110 ko01120 ko01130 map00010 map00030 map00052 map00230 map00500 map00520 map00521 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

PGM_PMM_I PGM_PMM_II PGM_PMM_III PGM_PMM_IV

Protein Analysis

628

Amino Acids

68.38

Weight (kDa)

6.22

Isoelectric Point (pI)

26.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PGM_PMM_I	PF02878	86 - 225	2e-33	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II	PF02879	258 - 360	7.6e-12	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III	PF02880	369 - 472	3.2e-22	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM1_C_vert_fung	PF24947	493 - 625	4.5e-51	Phosphoglucomutase-1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51820
fragaria_vesca	FvH4_7g28680 FvH4_7g28680
malus_domestica	MD00G1003800.v1.1 MD01G1192300.v1.1
prunus_persica	Prupe.2G286900_v2.0.a1
pyrus_communis	pycom01g20350 pycom07g23920
rosa_chinensis	RchiOBHm_Chr1g0376171
rosa_laevigata	RLG00000026623
rosa_multiflora	Rmu_ssc0000116.1_g000052
rosa_roxburghii	Rroxscaffold_4G00282330
rosa_rugosa	Rorug01G0394200
rosa_samantha	Rh1AG405800 Rh1BG369500 Rh1CG382200 Rh1DG399100
rosa_wichuraiana	Rw1G036000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	548, 728
AarI	CACCTGC	1 cut(s)	508
Acc36I	ACCTGC	2 cut(s)	508, 631
AccB1I	GGYRCC	1 cut(s)	1523
AccB7I	CCANNNNNTGG	1 cut(s)	1260
AccII	CGCG	1 cut(s)	1347
AccIII	TCCGGA	1 cut(s)	919
AciI	CCGC	8 cut(s)	180, 273, 444, 520, 615, 1044, 1200, 1345
AclWI	GGATC	8 cut(s)	322, 335, 755, 968, 1005, 1625, 1696, 1703
AcsI	RAATTY	4 cut(s)	465, 486, 1480, 1604
AcuI	CTGAAG	5 cut(s)	823, 848, 1089, 1539, 1865
AcyI	GRCGYC	1 cut(s)	1791
AfaI	GTAC	1 cut(s)	1016
AfiI	CCNNNNNNNGG	6 cut(s)	251, 286, 1037, 1199, 1260, 1351
AgsI	TTSAA	4 cut(s)	752, 927, 933, 1754
AjnI	CCWGG	4 cut(s)	330, 568, 1417, 1573
AjuI	GAANNNNNNNTTGG	2 cut(s)	1305, 1337
AluBI	AGCT	5 cut(s)	419, 811, 1234, 1376, 1843
AluI	AGCT	5 cut(s)	419, 811, 1234, 1376, 1843
Alw21I	GWGCWC	1 cut(s)	1207
Alw26I	GTCTC	4 cut(s)	281, 1438, 1777, 1836
Alw44I	GTGCAC	1 cut(s)	1203
AlwI	GGATC	8 cut(s)	322, 335, 755, 968, 1005, 1625, 1696, 1703
AlwNI	CAGNNNCTG	3 cut(s)	770, 1112, 1334
Aor13HI	TCCGGA	1 cut(s)	919
AoxI	GGCC	3 cut(s)	253, 531, 1165
ApaLI	GTGCAC	1 cut(s)	1203
ApeKI	GCWGC	2 cut(s)	419, 1127
ApoI	RAATTY	4 cut(s)	465, 486, 1480, 1604
AseI	ATTAAT	2 cut(s)	225, 1556
Asp700I	GAANNNNTTC	3 cut(s)	1146, 1720, 1850
AspS9I	GGNCC	4 cut(s)	575, 1028, 1166, 1185
AsuHPI	GGTGA	6 cut(s)	160, 301, 404, 1073, 1589, 1612
AsuII	TTCGAA	1 cut(s)	1741
AvaII	GGWCC	3 cut(s)	575, 1028, 1185
BaeGI	GKGCMC	1 cut(s)	1207
BamHI	GGATCC	1 cut(s)	327
BanI	GGYRCC	1 cut(s)	1523
BanII	GRGCYC	1 cut(s)	210
BbsI	GAAGAC	1 cut(s)	266
Bbv12I	GWGCWC	1 cut(s)	1207
BbvI	GCAGC	2 cut(s)	406, 1139
BccI	CCATC	9 cut(s)	97, 365, 389, 644, 899, 1046, 1052, 1349, 1679
BcgI	CGANNNNNNTGC	2 cut(s)	1649, 1683
BciT130I	CCWGG	4 cut(s)	332, 570, 1419, 1575
BcoDI	GTCTC	4 cut(s)	281, 1438, 1777, 1836
BfaI	CTAG	2 cut(s)	947, 1563
BfuAI	ACCTGC	2 cut(s)	508, 631
BglI	GCCNNNNNGGC	1 cut(s)	1799
BisI	GCNGC	5 cut(s)	180, 420, 444, 1044, 1128
BlsI	GCNGC	5 cut(s)	181, 421, 445, 1045, 1129
Bme1390I	CCNGG	4 cut(s)	332, 570, 1419, 1575
Bme18I	GGWCC	3 cut(s)	575, 1028, 1185
BmgT120I	GGNCC	4 cut(s)	575, 1028, 1166, 1185
BmiI	GGNNCC	9 cut(s)	234, 268, 329, 913, 1030, 1042, 1168, 1251, 1525
BmrFI	CCNGG	4 cut(s)	332, 570, 1419, 1575
BmrI	ACTGGG	2 cut(s)	917, 1471
BmsI	GCATC	5 cut(s)	225, 844, 1276, 1523, 1661
BmuI	ACTGGG	2 cut(s)	917, 1471
BpiI	GAAGAC	1 cut(s)	266
BpmI	CTGGAG	1 cut(s)	174
Bpu10I	CCTNAGC	1 cut(s)	993
Bpu14I	TTCGAA	1 cut(s)	1741
BpuEI	CTTGAG	1 cut(s)	1122
BsaAI	YACGTR	1 cut(s)	987
BsaBI	GATNNNNATC	2 cut(s)	431, 978
BsaHI	GRCGYC	1 cut(s)	1791
BsaI	GGTCTC	2 cut(s)	281, 1438
BsaJI	CCNNGG	2 cut(s)	210, 1170
BsaWI	WCCGGW	2 cut(s)	263, 919
BsaXI	ACNNNNNCTCC	2 cut(s)	61, 91
Bsc4I	CCNNNNNNNGG	6 cut(s)	251, 286, 1037, 1199, 1260, 1351
Bse1I	ACTGG	7 cut(s)	384, 764, 877, 912, 1261, 1466, 1861
Bse3DI	GCAATG	3 cut(s)	347, 693, 1389
Bse8I	GATNNNNATC	2 cut(s)	431, 978
BseAI	TCCGGA	1 cut(s)	919
BseBI	CCWGG	4 cut(s)	332, 570, 1419, 1575
BseDI	CCNNGG	2 cut(s)	210, 1170
BseGI	GGATG	6 cut(s)	376, 967, 1063, 1291, 1341, 1360
BseJI	GATNNNNATC	2 cut(s)	431, 978
BseLI	CCNNNNNNNGG	6 cut(s)	251, 286, 1037, 1199, 1260, 1351
BseMI	GCAATG	3 cut(s)	347, 693, 1389
BseMII	CTCAG	3 cut(s)	28, 163, 621
BseNI	ACTGG	7 cut(s)	384, 764, 877, 912, 1261, 1466, 1861
BseRI	GAGGAG	7 cut(s)	69, 97, 100, 103, 106, 109, 112
BseSI	GKGCMC	1 cut(s)	1207
BseXI	GCAGC	2 cut(s)	406, 1139
BseYI	CCCAGC	1 cut(s)	1289
BsgI	GTGCAG	2 cut(s)	405, 609
Bsh1236I	CGCG	1 cut(s)	1347
Bsh1285I	CGRYCG	1 cut(s)	249
BshFI	GGCC	3 cut(s)	255, 533, 1167
BshNI	GGYRCC	1 cut(s)	1523
BsiEI	CGRYCG	1 cut(s)	249
BsiHKAI	GWGCWC	1 cut(s)	1207
BsiSI	CCGG	2 cut(s)	264, 920
BslI	CCNNNNNNNGG	6 cut(s)	251, 286, 1037, 1199, 1260, 1351
BsmAI	GTCTC	4 cut(s)	281, 1438, 1777, 1836
BsnI	GGCC	3 cut(s)	255, 533, 1167
Bso31I	GGTCTC	2 cut(s)	281, 1438
Bsp119I	TTCGAA	1 cut(s)	1741
Bsp1286I	GDGCHC	2 cut(s)	210, 1207
Bsp13I	TCCGGA	1 cut(s)	919
Bsp1407I	TGTACA	1 cut(s)	1014
Bsp143I	GATC	9 cut(s)	246, 327, 760, 973, 997, 1210, 1630, 1688, 1695
BspACI	CCGC	8 cut(s)	180, 273, 444, 520, 615, 1044, 1200, 1345
BspANI	GGCC	3 cut(s)	255, 533, 1167
BspCNI	CTCAG	3 cut(s)	27, 162, 622
BspEI	TCCGGA	1 cut(s)	919
BspFNI	CGCG	1 cut(s)	1347
BspLI	GGNNCC	9 cut(s)	234, 268, 329, 913, 1030, 1042, 1168, 1251, 1525
BspMI	ACCTGC	2 cut(s)	508, 631
BspPI	GGATC	8 cut(s)	322, 335, 755, 968, 1005, 1625, 1696, 1703
BspT104I	TTCGAA	1 cut(s)	1741
BspT107I	GGYRCC	1 cut(s)	1523
BspTNI	GGTCTC	2 cut(s)	281, 1438
BsrDI	GCAATG	3 cut(s)	347, 693, 1389
BsrGI	TGTACA	1 cut(s)	1014
BsrI	ACTGG	7 cut(s)	384, 764, 877, 912, 1261, 1466, 1861
BssECI	CCNNGG	2 cut(s)	210, 1170
BssMI	GATC	9 cut(s)	246, 327, 760, 973, 997, 1210, 1630, 1688, 1695
BssNI	GRCGYC	1 cut(s)	1791
BssT1I	CCWWGG	2 cut(s)	210, 1170
Bst2UI	CCWGG	4 cut(s)	332, 570, 1419, 1575
Bst4CI	ACNGT	8 cut(s)	172, 199, 611, 748, 1019, 1185, 1758, 1876
Bst6I	CTCTTC	3 cut(s)	107, 190, 1308
BstACI	GRCGYC	1 cut(s)	1791
BstAPI	GCANNNNNTGC	2 cut(s)	695, 1133
BstAUI	TGTACA	1 cut(s)	1014
BstBAI	YACGTR	1 cut(s)	987
BstBI	TTCGAA	1 cut(s)	1741
BstC8I	GCNNGC	3 cut(s)	559, 864, 1571
BstDEI	CTNAG	6 cut(s)	14, 149, 630, 993, 1372, 1547
BstF5I	GGATG	6 cut(s)	376, 967, 1063, 1291, 1341, 1360
BstFNI	CGCG	1 cut(s)	1347
BstKTI	GATC	9 cut(s)	249, 330, 763, 976, 1000, 1213, 1633, 1691, 1698
BstMAI	GTCTC	4 cut(s)	281, 1438, 1777, 1836
BstMBI	GATC	9 cut(s)	246, 327, 760, 973, 997, 1210, 1630, 1688, 1695
BstMCI	CGRYCG	1 cut(s)	249
BstMWI	GCNNNNNNNGC	8 cut(s)	200, 509, 695, 863, 1124, 1133, 1373, 1799
BstNI	CCWGG	4 cut(s)	332, 570, 1419, 1575
BstNSI	RCATGY	1 cut(s)	866
BstSCI	CCNGG	4 cut(s)	330, 568, 1417, 1573
BstSLI	GKGCMC	1 cut(s)	1207
BstUI	CGCG	1 cut(s)	1347
BstV1I	GCAGC	2 cut(s)	406, 1139
BstV2I	GAAGAC	1 cut(s)	266
BstX2I	RGATCY	3 cut(s)	327, 973, 997
BstXI	CCANNNNNNTGG	2 cut(s)	569, 898
BstYI	RGATCY	3 cut(s)	327, 973, 997
BsuRI	GGCC	3 cut(s)	255, 533, 1167
BtsCI	GGATG	6 cut(s)	376, 967, 1063, 1291, 1341, 1360
BtsIMutI	CAGTG	6 cut(s)	639, 744, 1254, 1459, 1802, 1854
BveI	ACCTGC	2 cut(s)	508, 631
Cac8I	GCNNGC	3 cut(s)	559, 864, 1571
CaiI	CAGNNNCTG	3 cut(s)	770, 1112, 1334
Cfr13I	GGNCC	4 cut(s)	575, 1028, 1166, 1185
CseI	GACGC	1 cut(s)	1799
Csp6I	GTAC	1 cut(s)	1015
CspCI	CAANNNNNGTGG	2 cut(s)	553, 588
CviAII	CATG	6 cut(s)	859, 863, 962, 1072, 1189, 1781
CviQI	GTAC	1 cut(s)	1015
DdeI	CTNAG	6 cut(s)	14, 149, 630, 993, 1372, 1547
DpnI	GATC	9 cut(s)	248, 329, 762, 975, 999, 1212, 1632, 1690, 1697
DpnII	GATC	9 cut(s)	246, 327, 760, 973, 997, 1210, 1630, 1688, 1695
Eam1104I	CTCTTC	3 cut(s)	107, 190, 1308
EarI	CTCTTC	3 cut(s)	107, 190, 1308
Eco130I	CCWWGG	2 cut(s)	210, 1170
Eco24I	GRGCYC	1 cut(s)	210
Eco31I	GGTCTC	2 cut(s)	281, 1438
Eco47I	GGWCC	3 cut(s)	575, 1028, 1185
Eco57I	CTGAAG	5 cut(s)	823, 848, 1089, 1539, 1865
EcoRII	CCWGG	4 cut(s)	330, 568, 1417, 1573
EcoT14I	CCWWGG	2 cut(s)	210, 1170
EcoT22I	ATGCAT	1 cut(s)	864
EcoT38I	GRGCYC	1 cut(s)	210
ErhI	CCWWGG	2 cut(s)	210, 1170
FaeI	CATG	6 cut(s)	862, 866, 965, 1075, 1192, 1784
FalI	AAGNNNNNCTT	2 cut(s)	821, 853
FatI	CATG	6 cut(s)	858, 862, 961, 1071, 1188, 1780
FauNDI	CATATG	1 cut(s)	1361
Fnu4HI	GCNGC	5 cut(s)	180, 420, 444, 1044, 1128
FokI	GGATG	6 cut(s)	383, 954, 1070, 1298, 1328, 1367
FriOI	GRGCYC	1 cut(s)	210
Fsp4HI	GCNGC	5 cut(s)	180, 420, 444, 1044, 1128
FspBI	CTAG	2 cut(s)	947, 1563
GluI	GCNGC	5 cut(s)	180, 420, 444, 1044, 1128
GsaI	CCCAGC	1 cut(s)	1293
GsuI	CTGGAG	1 cut(s)	174
HaeIII	GGCC	3 cut(s)	255, 533, 1167
HapII	CCGG	2 cut(s)	264, 920
HgaI	GACGC	1 cut(s)	1799
Hin1I	GRCGYC	1 cut(s)	1791
Hin1II	CATG	6 cut(s)	862, 866, 965, 1075, 1192, 1784
HincII	GTYRAC	2 cut(s)	495, 706
HindII	GTYRAC	2 cut(s)	495, 706
HindIII	AAGCTT	1 cut(s)	1232
HinfI	GANTC	6 cut(s)	344, 632, 923, 1075, 1109, 1276
HpaII	CCGG	2 cut(s)	264, 920
HphI	GGTGA	6 cut(s)	160, 301, 404, 1073, 1589, 1612
Hpy166II	GTNNAC	6 cut(s)	377, 495, 575, 706, 1205, 1854
Hpy188III	TCNNGA	9 cut(s)	45, 220, 413, 920, 947, 971, 1139, 1491, 1713
Hpy8I	GTNNAC	6 cut(s)	377, 495, 575, 706, 1205, 1854
Hpy99I	CGWCG	1 cut(s)	1007
HpyCH4III	ACNGT	8 cut(s)	172, 199, 611, 748, 1019, 1185, 1758, 1876
HpyCH4IV	ACGT	2 cut(s)	986, 1446
HpyF10VI	GCNNNNNNNGC	8 cut(s)	200, 509, 695, 863, 1124, 1133, 1373, 1799
HpyF3I	CTNAG	6 cut(s)	14, 149, 630, 993, 1372, 1547
HpySE526I	ACGT	2 cut(s)	986, 1446
Hsp92I	GRCGYC	1 cut(s)	1791
Hsp92II	CATG	6 cut(s)	862, 866, 965, 1075, 1192, 1784
Kpn2I	TCCGGA	1 cut(s)	919
Kzo9I	GATC	9 cut(s)	246, 327, 760, 973, 997, 1210, 1630, 1688, 1695
LmnI	GCTCC	4 cut(s)	911, 1040, 1566, 1730
Lsp1109I	GCAGC	2 cut(s)	406, 1139
LweI	GCATC	5 cut(s)	225, 844, 1276, 1523, 1661
MaeI	CTAG	2 cut(s)	947, 1563
MaeII	ACGT	2 cut(s)	986, 1446
MaeIII	GTNAC	4 cut(s)	401, 766, 868, 1096
MalI	GATC	9 cut(s)	248, 329, 762, 975, 999, 1212, 1632, 1690, 1697
MboI	GATC	9 cut(s)	246, 327, 760, 973, 997, 1210, 1630, 1688, 1695
MfeI	CAATTG	1 cut(s)	322
MflI	RGATCY	3 cut(s)	327, 973, 997
MhlI	GDGCHC	2 cut(s)	210, 1207
MlyI	GAGTC	2 cut(s)	641, 1103
MmeI	TCCRAC	2 cut(s)	700, 1241
Mph1103I	ATGCAT	1 cut(s)	864
MroI	TCCGGA	1 cut(s)	919
MroXI	GAANNNNTTC	3 cut(s)	1146, 1720, 1850
MseI	TTAA	7 cut(s)	225, 408, 597, 603, 1229, 1556, 1814
MslI	CAYNNNNRTG	1 cut(s)	896
MspA1I	CMGCKG	1 cut(s)	273
MspI	CCGG	2 cut(s)	264, 920
MspR9I	CCNGG	4 cut(s)	332, 570, 1419, 1575
MunI	CAATTG	1 cut(s)	322
MvaI	CCWGG	4 cut(s)	332, 570, 1419, 1575
MvnI	CGCG	1 cut(s)	1347
MwoI	GCNNNNNNNGC	8 cut(s)	200, 509, 695, 863, 1124, 1133, 1373, 1799
NdeI	CATATG	1 cut(s)	1361
NdeII	GATC	9 cut(s)	246, 327, 760, 973, 997, 1210, 1630, 1688, 1695
NlaIII	CATG	6 cut(s)	862, 866, 965, 1075, 1192, 1784
NlaIV	GGNNCC	9 cut(s)	234, 268, 329, 913, 1030, 1042, 1168, 1251, 1525
NsiI	ATGCAT	1 cut(s)	864
NspI	RCATGY	1 cut(s)	866
NspV	TTCGAA	1 cut(s)	1741
PaeI	GCATGC	1 cut(s)	866
PaqCI	CACCTGC	1 cut(s)	508
PdmI	GAANNNNTTC	3 cut(s)	1146, 1720, 1850
PfeI	GAWTC	4 cut(s)	344, 923, 1075, 1276
PflMI	CCANNNNNTGG	1 cut(s)	1260
PkrI	GCNGC	5 cut(s)	181, 421, 445, 1045, 1129
Ple19I	CGATCG	1 cut(s)	249
PleI	GAGTC	2 cut(s)	640, 1103
PpsI	GAGTC	2 cut(s)	640, 1103
Ppu21I	YACGTR	1 cut(s)	987
PshBI	ATTAAT	2 cut(s)	225, 1556
PsiI	TTATAA	2 cut(s)	548, 728
Psp6I	CCWGG	4 cut(s)	330, 568, 1417, 1573
PspFI	CCCAGC	1 cut(s)	1289
PspGI	CCWGG	4 cut(s)	330, 568, 1417, 1573
PspN4I	GGNNCC	9 cut(s)	234, 268, 329, 913, 1030, 1042, 1168, 1251, 1525
PspPI	GGNCC	4 cut(s)	575, 1028, 1166, 1185
PstNI	CAGNNNCTG	3 cut(s)	770, 1112, 1334
PsuI	RGATCY	3 cut(s)	327, 973, 997
PvuI	CGATCG	1 cut(s)	249
RsaI	GTAC	1 cut(s)	1016
RsaNI	GTAC	1 cut(s)	1015
RseI	CAYNNNNRTG	1 cut(s)	896
SaqAI	TTAA	7 cut(s)	225, 408, 597, 603, 1229, 1556, 1814
SatI	GCNGC	5 cut(s)	180, 420, 444, 1044, 1128
Sau3AI	GATC	9 cut(s)	246, 327, 760, 973, 997, 1210, 1630, 1688, 1695
Sau96I	GGNCC	4 cut(s)	575, 1028, 1166, 1185
SchI	GAGTC	2 cut(s)	641, 1103
ScrFI	CCNGG	4 cut(s)	332, 570, 1419, 1575
SduI	GDGCHC	2 cut(s)	210, 1207
SfaNI	GCATC	5 cut(s)	225, 844, 1276, 1523, 1661
SfuI	TTCGAA	1 cut(s)	1741
SinI	GGWCC	3 cut(s)	575, 1028, 1185
SmiMI	CAYNNNNRTG	1 cut(s)	896
SmlI	CTYRAG	1 cut(s)	1137
SmoI	CTYRAG	1 cut(s)	1137
SphI	GCATGC	1 cut(s)	866
SsiI	CCGC	8 cut(s)	180, 273, 444, 520, 615, 1044, 1200, 1345
SspMI	CTAG	2 cut(s)	947, 1563
StyD4I	CCNGG	4 cut(s)	330, 568, 1417, 1573
StyI	CCWWGG	2 cut(s)	210, 1170
TaaI	ACNGT	8 cut(s)	172, 199, 611, 748, 1019, 1185, 1758, 1876
TaiI	ACGT	2 cut(s)	989, 1449
TaqI	TCGA	6 cut(s)	249, 1005, 1492, 1691, 1741, 1838
TatI	WGTACW	1 cut(s)	1014
TauI	GCSGC	3 cut(s)	182, 446, 1046
TfiI	GAWTC	4 cut(s)	344, 923, 1075, 1276
Tru1I	TTAA	7 cut(s)	225, 408, 597, 603, 1229, 1556, 1814
Tru9I	TTAA	7 cut(s)	225, 408, 597, 603, 1229, 1556, 1814
TscAI	CASTG	6 cut(s)	646, 751, 1261, 1466, 1809, 1861
TseI	GCWGC	2 cut(s)	419, 1127
TspDTI	ATGAA	5 cut(s)	48, 336, 1518, 1656, 1776
TspRI	CASTG	6 cut(s)	646, 751, 1261, 1466, 1809, 1861
Van91I	CCANNNNNTGG	1 cut(s)	1260
VneI	GTGCAC	1 cut(s)	1203
VpaK11BI	GGWCC	3 cut(s)	575, 1028, 1185
VspI	ATTAAT	2 cut(s)	225, 1556
XapI	RAATTY	4 cut(s)	465, 486, 1480, 1604
XbaI	TCTAGA	1 cut(s)	946
XceI	RCATGY	1 cut(s)	866
XcmI	CCANNNNNNNNNTGG	1 cut(s)	569
XmnI	GAANNNNTTC	3 cut(s)	1146, 1720, 1850
XspI	CTAG	2 cut(s)	947, 1563
Zsp2I	ATGCAT	1 cut(s)	864

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.