pycom07g23920

Phosphoglucomutase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
24721460 .. 24723913
2454 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g23920.9

Sequence Viewer

Length: 1134 bp
ATGTTTGATGCAATGCATGCTGTTACTGGTGCTTATGCGAAGCCCATCTTTGTGGATAAGCTCGGAGCTAGTCTGGATTCAATTTCAAATGGAGTGCCTCTGGAGGATTTTGGTCATGGCCATCCAGATCCTAATCTCACATATGCCAAGGATTTGGTCGACATTCTGTATAGCGAAAATGGACCTGACTTTGGGGCTGCTAGTGATGGGGATGGTGATAGGAACATGATTCTTGGTAGAGGCTTTTTTGTTACTCCTTCAGACTCTGTTGCAATTATTGCAGCCAATGCCCAAGAAGCTATTCCATACTTCCGGAGGGGCCCCAAGGTCGTGCACCTTTGTTTCCACTGTTATTTGTTTGCAGTGCGATTTTCTTGTAGAACAACAAGAAATGACTGTTTATTTCCTTTAATTATTTGGGGATTAGCTCGATCCATGCCAACAAGTGGTGCACTTGATCGTGTTGCTGAAAAATTGAAGCTTCCTTTCTTTGAGGTTCCCACTGGTTGGAAGTTCTTTGGGAATCTTATGGATGCTGGGAAGTTATCTATATGTGGGGAAGAGAGTTTTGGAACAGGTTCTGATCACATCCGCGAGAAAGATGGCATATGGGCAGTTTTAGCTTGGCTTTCAATCATTGCATATCGTAACAAAGACAAAAAACCTGGGGAGAAGTTGGTCTCTGTTGCAGACGTCGTGAAGGAACACTGGGCAACCTATGGAAGAAATTTCTTTTCTCGATATGACTACGAAGAATGCGAGTCTGCATGTGCCAACAAAATGATAGATTATCTTCGAGAATTGATCTCTAGCAGCAAGACCGGTGACAAGTACGGAAATTACATTCTCCAATTTGCTGATGACTTTACGTACACTGATCCTGTTGATGGAAGTGTGGCGTCAAAGCAAGGTGTTCGGTTTGTTTTTACAGATGGATCAAGGATCATATATCGCTTATCAGGAACGGGTTCAGCAGGAGCAACTGTTCGAATTTACATTGAACAATATGAACCAGATGCCTCTAAACATGACGTGGATGCCCAAACGGCACTAAAGCCATTGATAGATTTGGCATTGTCTGTATCGAAGCTGAAGGAATTCACTGGAAGGGAGAAGCCCACAGTCATCACATGA

Protein Analysis

378

Amino Acids

41.7

Weight (kDa)

5.68

Isoelectric Point (pI)

25.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013507)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 696
AccB7I CCANNNNNTGG 2 cut(s) 446, 507
AccI GTMKAC 1 cut(s) 159
AccII CGCG 1 cut(s) 594
AccIII TCCGGA 1 cut(s) 312
AciI CCGC 1 cut(s) 592
AclWI GGATC 5 cut(s) 122, 426, 872, 943, 950
AcoI YGGCCR 1 cut(s) 118
AcsI RAATTY 3 cut(s) 727, 990, 1097
AcuI CTGAAG 2 cut(s) 243, 1112
AcyI GRCGYC 2 cut(s) 693, 899
AfaI GTAC 2 cut(s) 833, 872
AfiI CCNNNNNNNGG 4 cut(s) 191, 446, 507, 887
AgeI ACCGGT 1 cut(s) 821
AgsI TTSAA 5 cut(s) 81, 87, 478, 633, 1001
AjiI CACGTC 1 cut(s) 1033
AjnI CCWGG 1 cut(s) 664
AjuI GAANNNNNNNTTGG 4 cut(s) 285, 317, 552, 584
AloI GAACNNNNNNTCC 2 cut(s) 969, 1001
AluBI AGCT 7 cut(s) 61, 68, 299, 428, 481, 623, 1090
AluI AGCT 7 cut(s) 61, 68, 299, 428, 481, 623, 1090
Alw21I GWGCWC 2 cut(s) 336, 454
Alw26I GTCTC 1 cut(s) 685
Alw44I GTGCAC 2 cut(s) 332, 450
AlwI GGATC 5 cut(s) 122, 426, 872, 943, 950
AlwNI CAGNNNCTG 2 cut(s) 266, 581
Aor13HI TCCGGA 1 cut(s) 312
AoxI GGCC 2 cut(s) 118, 319
ApaI GGGCCC 1 cut(s) 323
ApaLI GTGCAC 2 cut(s) 332, 450
ApeKI GCWGC 3 cut(s) 197, 281, 813
ApoI RAATTY 3 cut(s) 727, 990, 1097
AsiGI ACCGGT 1 cut(s) 821
Asp700I GAANNNNTTC 4 cut(s) 300, 577, 967, 1097
AspS9I GGNCC 3 cut(s) 182, 319, 320
AsuHPI GGTGA 2 cut(s) 227, 836
AsuII TTCGAA 1 cut(s) 988
AvaII GGWCC 1 cut(s) 182
BaeGI GKGCMC 3 cut(s) 323, 336, 454
BalI TGGCCA 1 cut(s) 120
BanII GRGCYC 1 cut(s) 323
Bbv12I GWGCWC 2 cut(s) 336, 454
BbvI GCAGC 3 cut(s) 184, 293, 825
BccI CCATC 7 cut(s) 53, 129, 200, 206, 596, 881, 926
BceAI ACGGC 1 cut(s) 1062
BcgI CGANNNNNNTGC 2 cut(s) 896, 930
BciT130I CCWGG 1 cut(s) 666
BclI TGATCA 1 cut(s) 583
BcoDI GTCTC 1 cut(s) 685
BfaI CTAG 3 cut(s) 69, 201, 810
BglI GCCNNNNNGGC 1 cut(s) 1046
BisI GCNGC 3 cut(s) 198, 282, 814
BlsI GCNGC 3 cut(s) 199, 283, 815
Bme1390I CCNGG 1 cut(s) 666
Bme18I GGWCC 1 cut(s) 182
BmgBI CACGTC 1 cut(s) 1033
BmgT120I GGNCC 3 cut(s) 182, 319, 320
BmiI GGNNCC 4 cut(s) 320, 321, 322, 498
BmrFI CCNGG 1 cut(s) 666
BmrI ACTGGG 1 cut(s) 718
BmsI GCATC 3 cut(s) 523, 1006, 1027
BmuI ACTGGG 1 cut(s) 718
BpmI CTGGAG 1 cut(s) 122
Bpu14I TTCGAA 1 cut(s) 988
BsaAI YACGTR 1 cut(s) 870
BsaBI GATNNNNATC 1 cut(s) 132
BsaHI GRCGYC 2 cut(s) 693, 899
BsaI GGTCTC 1 cut(s) 685
BsaJI CCNNGG 3 cut(s) 147, 324, 665
BsaWI WCCGGW 2 cut(s) 312, 821
BsaXI ACNNNNNCTCC 2 cut(s) 969, 999
Bsc4I CCNNNNNNNGG 4 cut(s) 191, 446, 507, 887
Bse118I RCCGGY 1 cut(s) 821
Bse1I ACTGG 4 cut(s) 31, 508, 713, 1108
Bse3DI GCAATG 2 cut(s) 18, 636
Bse8I GATNNNNATC 1 cut(s) 132
BseAI TCCGGA 1 cut(s) 312
BseBI CCWGG 1 cut(s) 666
BseDI CCNNGG 3 cut(s) 147, 324, 665
BseGI GGATG 5 cut(s) 121, 217, 538, 588, 1042
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 4 cut(s) 191, 446, 507, 887
BseMI GCAATG 2 cut(s) 18, 636
BseNI ACTGG 4 cut(s) 31, 508, 713, 1108
BseSI GKGCMC 3 cut(s) 323, 336, 454
BseXI GCAGC 3 cut(s) 184, 293, 825
BseYI CCCAGC 1 cut(s) 536
Bsh1236I CGCG 1 cut(s) 594
BshFI GGCC 2 cut(s) 120, 321
BshTI ACCGGT 1 cut(s) 821
BsiHKAI GWGCWC 2 cut(s) 336, 454
BsiSI CCGG 2 cut(s) 313, 822
BslI CCNNNNNNNGG 4 cut(s) 191, 446, 507, 887
BsmAI GTCTC 1 cut(s) 685
BsmI GAATGC 1 cut(s) 761
BsnI GGCC 2 cut(s) 120, 321
Bso31I GGTCTC 1 cut(s) 685
Bsp119I TTCGAA 1 cut(s) 988
Bsp120I GGGCCC 1 cut(s) 319
Bsp1286I GDGCHC 3 cut(s) 323, 336, 454
Bsp13I TCCGGA 1 cut(s) 312
Bsp143I GATC 8 cut(s) 127, 431, 457, 583, 804, 877, 935, 942
BspACI CCGC 1 cut(s) 592
BspANI GGCC 2 cut(s) 120, 321
BspEI TCCGGA 1 cut(s) 312
BspFNI CGCG 1 cut(s) 594
BspLI GGNNCC 4 cut(s) 320, 321, 322, 498
BspPI GGATC 5 cut(s) 122, 426, 872, 943, 950
BspT104I TTCGAA 1 cut(s) 988
BspTNI GGTCTC 1 cut(s) 685
BsrDI GCAATG 2 cut(s) 18, 636
BsrFI RCCGGY 1 cut(s) 821
BsrI ACTGG 4 cut(s) 31, 508, 713, 1108
BssAI RCCGGY 1 cut(s) 821
BssECI CCNNGG 3 cut(s) 147, 324, 665
BssMI GATC 8 cut(s) 127, 431, 457, 583, 804, 877, 935, 942
BssNI GRCGYC 2 cut(s) 693, 899
BssT1I CCWWGG 2 cut(s) 147, 324
Bst2UI CCWGG 1 cut(s) 666
Bst4CI ACNGT 4 cut(s) 350, 398, 985, 1123
Bst6I CTCTTC 1 cut(s) 555
BstACI GRCGYC 2 cut(s) 693, 899
BstAPI GCANNNNNTGC 3 cut(s) 17, 278, 287
BstBAI YACGTR 1 cut(s) 870
BstBI TTCGAA 1 cut(s) 988
BstC8I GCNNGC 1 cut(s) 18
BstF5I GGATG 5 cut(s) 121, 217, 538, 588, 1042
BstFNI CGCG 1 cut(s) 594
BstKTI GATC 8 cut(s) 130, 434, 460, 586, 807, 880, 938, 945
BstMAI GTCTC 1 cut(s) 685
BstMBI GATC 8 cut(s) 127, 431, 457, 583, 804, 877, 935, 942
BstMWI GCNNNNNNNGC 6 cut(s) 17, 278, 287, 296, 620, 1046
BstNI CCWGG 1 cut(s) 666
BstNSI RCATGY 2 cut(s) 20, 771
BstSCI CCNGG 1 cut(s) 664
BstSLI GKGCMC 3 cut(s) 323, 336, 454
BstSNI TACGTA 1 cut(s) 870
BstUI CGCG 1 cut(s) 594
BstV1I GCAGC 3 cut(s) 184, 293, 825
BstX2I RGATCY 1 cut(s) 127
BstXI CCANNNNNNTGG 2 cut(s) 52, 154
BstYI RGATCY 1 cut(s) 127
BsuRI GGCC 2 cut(s) 120, 321
BtrI CACGTC 1 cut(s) 1033
BtsCI GGATG 5 cut(s) 121, 217, 538, 588, 1042
BtsI GCAGTG 1 cut(s) 369
BtsIMutI CAGTG 6 cut(s) 346, 369, 501, 706, 873, 1101
Cac8I GCNNGC 1 cut(s) 18
CaiI CAGNNNCTG 2 cut(s) 266, 581
Cfr10I RCCGGY 1 cut(s) 821
Cfr13I GGNCC 3 cut(s) 182, 319, 320
CseI GACGC 1 cut(s) 888
Csp6I GTAC 2 cut(s) 832, 871
CspAI ACCGGT 1 cut(s) 821
CviAII CATG 7 cut(s) 17, 116, 226, 436, 768, 1028, 1131
CviQI GTAC 2 cut(s) 832, 871
DpnI GATC 8 cut(s) 129, 433, 459, 585, 806, 879, 937, 944
DpnII GATC 8 cut(s) 127, 431, 457, 583, 804, 877, 935, 942
EaeI YGGCCR 1 cut(s) 118
Eam1104I CTCTTC 1 cut(s) 555
EarI CTCTTC 1 cut(s) 555
Eco105I TACGTA 1 cut(s) 870
Eco130I CCWWGG 2 cut(s) 147, 324
Eco24I GRGCYC 1 cut(s) 323
Eco31I GGTCTC 1 cut(s) 685
Eco47I GGWCC 1 cut(s) 182
Eco57I CTGAAG 2 cut(s) 243, 1112
EcoO109I RGGNCCY 2 cut(s) 319, 320
EcoRI GAATTC 1 cut(s) 1097
EcoRII CCWGG 1 cut(s) 664
EcoT14I CCWWGG 2 cut(s) 147, 324
EcoT22I ATGCAT 1 cut(s) 18
EcoT38I GRGCYC 1 cut(s) 323
ErhI CCWWGG 2 cut(s) 147, 324
FaeI CATG 7 cut(s) 20, 119, 229, 439, 771, 1031, 1134
FalI AAGNNNNNCTT 2 cut(s) 32, 64
FatI CATG 7 cut(s) 16, 115, 225, 435, 767, 1027, 1130
FauNDI CATATG 2 cut(s) 142, 608
FbaI TGATCA 1 cut(s) 583
FblI GTMKAC 1 cut(s) 159
Fnu4HI GCNGC 3 cut(s) 198, 282, 814
FokI GGATG 5 cut(s) 108, 224, 545, 575, 1049
FriOI GRGCYC 1 cut(s) 323
Fsp4HI GCNGC 3 cut(s) 198, 282, 814
FspBI CTAG 3 cut(s) 69, 201, 810
GluI GCNGC 3 cut(s) 198, 282, 814
GsaI CCCAGC 1 cut(s) 540
GsuI CTGGAG 1 cut(s) 122
HaeIII GGCC 2 cut(s) 120, 321
HapII CCGG 2 cut(s) 313, 822
HgaI GACGC 1 cut(s) 888
Hin1I GRCGYC 2 cut(s) 693, 899
Hin1II CATG 7 cut(s) 20, 119, 229, 439, 771, 1031, 1134
HincII GTYRAC 1 cut(s) 160
HindII GTYRAC 1 cut(s) 160
HindIII AAGCTT 1 cut(s) 479
HinfI GANTC 5 cut(s) 77, 229, 263, 523, 761
HpaII CCGG 2 cut(s) 313, 822
HphI GGTGA 2 cut(s) 227, 836
Hpy166II GTNNAC 4 cut(s) 160, 334, 452, 873
Hpy188I TCNGA 3 cut(s) 65, 262, 583
Hpy188III TCNNGA 8 cut(s) 74, 101, 125, 313, 697, 738, 797, 960
Hpy8I GTNNAC 4 cut(s) 160, 334, 452, 873
Hpy99I CGWCG 1 cut(s) 698
HpyAV CCTTC 4 cut(s) 267, 694, 1087, 1101
HpyCH4III ACNGT 4 cut(s) 350, 398, 985, 1123
HpyCH4IV ACGT 3 cut(s) 693, 869, 1032
HpyF10VI GCNNNNNNNGC 6 cut(s) 17, 278, 287, 296, 620, 1046
HpySE526I ACGT 3 cut(s) 693, 869, 1032
Hsp92I GRCGYC 2 cut(s) 693, 899
Hsp92II CATG 7 cut(s) 20, 119, 229, 439, 771, 1031, 1134
Kpn2I TCCGGA 1 cut(s) 312
Ksp22I TGATCA 1 cut(s) 583
Kzo9I GATC 8 cut(s) 127, 431, 457, 583, 804, 877, 935, 942
LmnI GCTCC 2 cut(s) 65, 977
Lsp1109I GCAGC 3 cut(s) 184, 293, 825
LweI GCATC 3 cut(s) 523, 1006, 1027
MaeI CTAG 3 cut(s) 69, 201, 810
MaeII ACGT 3 cut(s) 693, 869, 1032
MaeIII GTNAC 4 cut(s) 22, 250, 647, 824
MalI GATC 8 cut(s) 129, 433, 459, 585, 806, 879, 937, 944
MboI GATC 8 cut(s) 127, 431, 457, 583, 804, 877, 935, 942
MboII GAAGA 4 cut(s) 572, 735, 764, 785
MflI RGATCY 1 cut(s) 127
MhlI GDGCHC 3 cut(s) 323, 336, 454
MlsI TGGCCA 1 cut(s) 120
MluNI TGGCCA 1 cut(s) 120
MlyI GAGTC 2 cut(s) 257, 770
MmeI TCCRAC 1 cut(s) 488
MnlI CCTC 6 cut(s) 97, 108, 233, 309, 487, 1030
Mox20I TGGCCA 1 cut(s) 120
Mph1103I ATGCAT 1 cut(s) 18
MroI TCCGGA 1 cut(s) 312
MroXI GAANNNNTTC 4 cut(s) 300, 577, 967, 1097
MscI TGGCCA 1 cut(s) 120
MseI TTAA 1 cut(s) 410
MslI CAYNNNNRTG 1 cut(s) 50
Msp20I TGGCCA 1 cut(s) 120
MspI CCGG 2 cut(s) 313, 822
MspR9I CCNGG 1 cut(s) 666
Mva1269I GAATGC 1 cut(s) 761
MvaI CCWGG 1 cut(s) 666
MvnI CGCG 1 cut(s) 594
MwoI GCNNNNNNNGC 6 cut(s) 17, 278, 287, 296, 620, 1046
NdeI CATATG 2 cut(s) 142, 608
NdeII GATC 8 cut(s) 127, 431, 457, 583, 804, 877, 935, 942
NlaIII CATG 7 cut(s) 20, 119, 229, 439, 771, 1031, 1134
NlaIV GGNNCC 4 cut(s) 320, 321, 322, 498
NmuCI GTSAC 1 cut(s) 824
NsiI ATGCAT 1 cut(s) 18
NspI RCATGY 2 cut(s) 20, 771
NspV TTCGAA 1 cut(s) 988
PaeI GCATGC 1 cut(s) 20
PcsI WCGNNNNNNNCGW 1 cut(s) 756
PctI GAATGC 1 cut(s) 761
PdmI GAANNNNTTC 4 cut(s) 300, 577, 967, 1097
PfeI GAWTC 3 cut(s) 77, 229, 523
PflMI CCANNNNNTGG 2 cut(s) 446, 507
PinAI ACCGGT 1 cut(s) 821
PkrI GCNGC 3 cut(s) 199, 283, 815
PleI GAGTC 2 cut(s) 257, 769
PpsI GAGTC 2 cut(s) 257, 769
Ppu21I YACGTR 1 cut(s) 870
Psp6I CCWGG 1 cut(s) 664
PspFI CCCAGC 1 cut(s) 536
PspGI CCWGG 1 cut(s) 664
PspN4I GGNNCC 4 cut(s) 320, 321, 322, 498
PspOMI GGGCCC 1 cut(s) 319
PspPI GGNCC 3 cut(s) 182, 319, 320
PstNI CAGNNNCTG 2 cut(s) 266, 581
PsuI RGATCY 1 cut(s) 127
RsaI GTAC 2 cut(s) 833, 872
RsaNI GTAC 2 cut(s) 832, 871
RseI CAYNNNNRTG 1 cut(s) 50
SalI GTCGAC 1 cut(s) 158
SaqAI TTAA 1 cut(s) 410
SatI GCNGC 3 cut(s) 198, 282, 814
Sau3AI GATC 8 cut(s) 127, 431, 457, 583, 804, 877, 935, 942
Sau96I GGNCC 3 cut(s) 182, 319, 320
SchI GAGTC 2 cut(s) 257, 770
ScrFI CCNGG 1 cut(s) 666
SduI GDGCHC 3 cut(s) 323, 336, 454
SfaNI GCATC 3 cut(s) 523, 1006, 1027
SfuI TTCGAA 1 cut(s) 988
SinI GGWCC 1 cut(s) 182
SmiMI CAYNNNNRTG 1 cut(s) 50
SnaBI TACGTA 1 cut(s) 870
SphI GCATGC 1 cut(s) 20
SsiI CCGC 1 cut(s) 592
SspMI CTAG 3 cut(s) 69, 201, 810
StyD4I CCNGG 1 cut(s) 664
StyI CCWWGG 2 cut(s) 147, 324
TaaI ACNGT 4 cut(s) 350, 398, 985, 1123
TaiI ACGT 3 cut(s) 696, 872, 1035
TaqI TCGA 6 cut(s) 159, 430, 739, 796, 988, 1085
TfiI GAWTC 3 cut(s) 77, 229, 523
Tru1I TTAA 1 cut(s) 410
Tru9I TTAA 1 cut(s) 410
TscAI CASTG 6 cut(s) 353, 369, 508, 713, 880, 1108
TseFI GTSAC 1 cut(s) 824
TseI GCWGC 3 cut(s) 197, 281, 813
Tsp45I GTSAC 1 cut(s) 824
TspDTI ATGAA 1 cut(s) 1023
TspGWI ACGGA 1 cut(s) 849
TspRI CASTG 6 cut(s) 353, 369, 508, 713, 880, 1108
Van91I CCANNNNNTGG 2 cut(s) 446, 507
VneI GTGCAC 2 cut(s) 332, 450
VpaK11BI GGWCC 1 cut(s) 182
XapI RAATTY 3 cut(s) 727, 990, 1097
XceI RCATGY 2 cut(s) 20, 771
XmiI GTMKAC 1 cut(s) 159
XmnI GAANNNNTTC 4 cut(s) 300, 577, 967, 1097
XspI CTAG 3 cut(s) 69, 201, 810
ZraI GACGTC 1 cut(s) 694
Zsp2I ATGCAT 1 cut(s) 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.