Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0013507

Physical Location & Seq

Genomic Coordinates Reverse (-)

29162577 .. 29167961

Gene Structure 5385 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1192300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGATTTTCCAAACTTGTTTGAATCTGTCAGCATTCAGAGACTTAAATCTTCCCCAACATCTTCCACTCTCTCTCTCTCTACCCTCTGCAACACAAACTCAAGAAAAATGGCACTTTCTCTCAGATTACACAACCTTCTCTCCCCGACCTTCAGACCCAAACCACCACCATCATCAAAGGCCACTCTGTCTCCTCCTAACCAATCTCTCTCTCTCCTCTCCTCCTCTCCCCTTCCGCACCTCCTACTCAAAGCCTCACACTCCCTCACTATTAGAGCCGCTTCCTCCTCCTCTTCTTCCCCAACCACGGTTGCTGATCCACAGGGCATCAAGATTAATTTGGTTCCCACCAAACCAATTGAAGGTCAGAAGACTGGAACCAGTGGTCTCCGAAAAAAGGTGAAAGTTTTTCAGCAAGAAAATTACCTTGCAAATTGGATTCAGGCTTTATTTGATTCTTTGCCGTCTGAGGATTACAAGAATGGGGTATTAGTGTTAGGAGGTGATGGTCGTTACTTTAATCGTGAAGCTGCGCAGATTATTATCAAAATTGCCGCAGGGAACGGTGTTGGGAAAATTTTGGTTGGCAAGGAAGGAATTTTGTCAACACCTGCCGTTTCTGCAGCCAATGGGGGATTTATTATGAGTGCAAGCCACAATCCTGGTGGACCTGATTATGATTGGGGTATTAAGTTTAATTACAACAGTGGTCAACCTGCACCCGAGTCCATCACAGATAAGATTTACGGAAACACTCTTTCTATCTCTGAAATAAAGGTAGCAGATATTGCTGATGTTGACCTATCTACTCTTGGAGTTGTAAAGTATGGGAACTTCAGTGTTGAAGTTGTAGATCCGGTTTCTGACTATTTGGAACTGTTGGAGAATGTATTTGACTTCCAGCTTATCAAGAGTCTTCTACAGTTAGACTTCAGGTTTATGTTTGATGCAATGCATGCTGTTACTGGTGCTTATGCAAAACCCATCTTTGTGGATAAGCTCGGAGCCAGTCCAGATTCAATTTCAAATGGAGTGCCTCTGGAGGATTTTGGTCATGGTCATCCAGATCCTAATCTTACATATGCCAAGGATTTGGTTGACATTCTGTATAGCGAAAATGGACCTGACTTTGGGGCTGCTAGTGATGGGGATGGTGATAGAAACATGATTCTTGGTAGAAGCTTTTTTGTCACTCCTTCAGACTCTGTTGCAATTATTGCAGCCAATGCACAAGAAGCTATTCCATACTTCCGGGGTGGCCCCAAGGGATTAGCTCGATCCATGCCAACAAGTGGTGCACTCGATCGTGTTGCTGAAAAATTGAAGCTTCCTTTCTTTGAGGTTCCCACTGGTTGGAAGTTCTTTGGTAATCTTATGGATGCTGGGAAGTTATCTATCTGCGGGGAAGAGAGTTTTGGAACAGGTTCTGATCACATCCGCGAGAAAGATGGCATATGGGCTGTTTTAGCTTGGCTTTCAATCATTGCATATCGAAACAAAGACAAAAAACGTGGGGAGAAGTTGGTCTCTGTCTCAGATGTTGTGAAGGAACACTGGGCAACCTATGGAAGAAATTTCTTTTCTCGATATGACTATGAAGTGAGCATCACAACTGCATTTAAACCATCCTTGCACAATCAAAGTCTATACTTCAGTTTCAGTCGTGAAACTTTGAGTATCCACAAACTGGATCGATTTGTATTTTATTGGGATTGGTGCAGTTTTTTAACTGGTGTAATCTTTACCCAGGAATGCGAGTCTGCAGGTGCCAGCAAAATGATAGATTATCTTCGAGAATTGATCTCTAGCAGCAGGACCGGTGACAAGTATGGAAATTACGTTCTCCAATTCGCTGATGACTTTACGTACACTGATCCTGTTGATGGAAGTGTGGCATCGAAGCAAGGTGTTCGGTTTGTTTTTACCGATGGATCAAGGATCATATATCGCTTATCAGGAACGGGTTCAGCAGGAGCAACTGTTCGAATTTACATAGAACAATATGAACCAGATGCCTCTAAACATGATGCGGATGCCCAAATGGCACTAAAGCCATTGATAGATTTGGCGTTGTCTGTATCGAAGCTGAAGGAATTCACTGGAAAGGAGAAGCCCACAGTCATCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0004614 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0005982 GO:0005996 GO:0006006 GO:0006012 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009250 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009581 GO:0009582 GO:0009590 GO:0009605 GO:0009628 GO:0009629 GO:0009941 GO:0009987 GO:0010319 GO:0015980 GO:0016051 GO:0016052 GO:0016853 GO:0016866 GO:0016868 GO:0019252 GO:0019318 GO:0019320 GO:0019388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046365 GO:0048046 GO:0050896 GO:0051606 GO:0055114 GO:0071704 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00052 ko00230 ko00500 ko00520 ko00521 ko01100 ko01110 ko01120 ko01130 map00010 map00030 map00052 map00230 map00500 map00520 map00521 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

PGM_PMM_I PGM_PMM_II PGM_PMM_III PGM_PMM_IV

Protein Analysis

710

Amino Acids

77.47

Weight (kDa)

6.22

Isoelectric Point (pI)

30.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PGM_PMM_I	PF02878	123 - 256	6.9e-28	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II	PF02879	289 - 390	9.8e-12	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III	PF02880	400 - 522	2.8e-22	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM1_C_vert_fung	PF24947	584 - 706	5.4e-41	Phosphoglucomutase-1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51820
fragaria_vesca	FvH4_7g28680 FvH4_7g28680
malus_domestica	MD00G1003800.v1.1 MD01G1192300.v1.1
prunus_persica	Prupe.2G286900_v2.0.a1
pyrus_communis	pycom01g20350 pycom07g23920
rosa_chinensis	RchiOBHm_Chr1g0376171
rosa_laevigata	RLG00000026623
rosa_multiflora	Rmu_ssc0000116.1_g000052
rosa_roxburghii	Rroxscaffold_4G00282330
rosa_rugosa	Rorug01G0394200
rosa_samantha	Rh1AG405800 Rh1BG369500 Rh1CG382200 Rh1DG399100
rosa_wichuraiana	Rw1G036000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	619, 1754
Acc16I	TGCGCA	1 cut(s)	534
Acc36I	ACCTGC	3 cut(s)	619, 724, 1754
AccB1I	GGYRCC	1 cut(s)	1766
AccB7I	CCANNNNNTGG	3 cut(s)	1292, 1353, 1687
AccII	CGCG	1 cut(s)	1440
AciI	CCGC	6 cut(s)	236, 279, 555, 1401, 1438, 2030
AclWI	GGATC	8 cut(s)	311, 848, 1061, 1272, 1698, 1868, 1939, 1946
AcsI	RAATTY	5 cut(s)	576, 597, 1573, 1986, 2093
AcuI	CTGAAG	6 cut(s)	136, 820, 916, 1182, 1636, 2108
AfaI	GTAC	1 cut(s)	1868
AfiI	CCNNNNNNNGG	8 cut(s)	307, 362, 397, 1130, 1292, 1353, 1687, 1883
AgeI	ACCGGT	1 cut(s)	1817
AgsI	TTSAA	7 cut(s)	23, 362, 845, 1020, 1026, 1324, 1479
AjnI	CCWGG	2 cut(s)	661, 1746
AjuI	GAANNNNNNNTTGG	2 cut(s)	1398, 1430
AloI	GAACNNNNNNTCC	4 cut(s)	1824, 1856, 1965, 1997
AluBI	AGCT	9 cut(s)	530, 904, 1000, 1182, 1238, 1274, 1327, 1469, 2086
AluI	AGCT	9 cut(s)	530, 904, 1000, 1182, 1238, 1274, 1327, 1469, 2086
Alw21I	GWGCWC	1 cut(s)	1300
Alw26I	GTCTC	5 cut(s)	34, 195, 392, 1531, 1537
Alw44I	GTGCAC	1 cut(s)	1296
AlwI	GGATC	8 cut(s)	311, 848, 1061, 1272, 1698, 1868, 1939, 1946
AlwNI	CAGNNNCTG	2 cut(s)	1205, 1427
Ama87I	CYCGRG	1 cut(s)	722
AoxI	GGCC	2 cut(s)	180, 1258
ApaLI	GTGCAC	1 cut(s)	1296
ApeKI	GCWGC	5 cut(s)	530, 623, 1136, 1220, 1809
ApoI	RAATTY	5 cut(s)	576, 597, 1573, 1986, 2093
AseI	ATTAAT	1 cut(s)	336
AsiGI	ACCGGT	1 cut(s)	1817
Asp700I	GAANNNNTTC	4 cut(s)	1239, 1423, 1963, 2093
AspLEI	GCGC	1 cut(s)	535
AspS9I	GGNCC	4 cut(s)	668, 1121, 1259, 1815
AsuC2I	CCSGG	1 cut(s)	1253
AsuHPI	GGTGA	4 cut(s)	412, 515, 1166, 1832
AsuII	TTCGAA	1 cut(s)	1984
AvaI	CYCGRG	1 cut(s)	722
AvaII	GGWCC	3 cut(s)	668, 1121, 1815
BaeGI	GKGCMC	1 cut(s)	1300
BanI	GGYRCC	1 cut(s)	1766
BarI	GAAGNNNNNNTAC	2 cut(s)	818, 850
BbsI	GAAGAC	2 cut(s)	377, 908
Bbv12I	GWGCWC	1 cut(s)	1300
BbvI	GCAGC	5 cut(s)	517, 635, 1123, 1232, 1821
BceAI	ACGGC	2 cut(s)	448, 599
BcgI	CGANNNNNNTGC	4 cut(s)	1292, 1326, 1892, 1926
BciT130I	CCWGG	2 cut(s)	663, 1748
BciVI	GTATCC	1 cut(s)	1688
BclI	TGATCA	1 cut(s)	1429
BcnI	CCSGG	1 cut(s)	1253
BcoDI	GTCTC	5 cut(s)	34, 195, 392, 1531, 1537
BfaI	CTAG	2 cut(s)	1140, 1806
BfmI	CTRYAG	3 cut(s)	621, 920, 1761
BfuAI	ACCTGC	3 cut(s)	619, 724, 1754
BfuI	GTATCC	1 cut(s)	1688
BglI	GCCNNNNNGGC	1 cut(s)	2042
BisI	GCNGC	7 cut(s)	279, 531, 555, 624, 1137, 1221, 1810
BlsI	GCNGC	7 cut(s)	280, 532, 556, 625, 1138, 1222, 1811
Bme1390I	CCNGG	3 cut(s)	663, 1253, 1748
Bme18I	GGWCC	3 cut(s)	668, 1121, 1815
BmeT110I	CYCGRG	1 cut(s)	722
BmgT120I	GGNCC	4 cut(s)	668, 1121, 1259, 1815
BmiI	GGNNCC	6 cut(s)	345, 379, 1006, 1261, 1344, 1768
BmrFI	CCNGG	3 cut(s)	663, 1253, 1748
BmrI	ACTGGG	1 cut(s)	1564
BmsI	GCATC	8 cut(s)	336, 937, 1369, 1614, 1904, 2002, 2017, 2023
BmuI	ACTGGG	1 cut(s)	1564
BpiI	GAAGAC	2 cut(s)	377, 908
BpmI	CTGGAG	1 cut(s)	1061
Bpu14I	TTCGAA	1 cut(s)	1984
BpuEI	CTTGAG	1 cut(s)	85
BpuMI	CCSGG	1 cut(s)	1253
Bsa29I	ATCGAT	1 cut(s)	1693
BsaAI	YACGTR	1 cut(s)	1866
BsaBI	GATNNNNATC	2 cut(s)	542, 1071
BsaI	GGTCTC	2 cut(s)	392, 1531
BsaJI	CCNNGG	5 cut(s)	306, 1086, 1252, 1263, 1746
BsaWI	WCCGGW	2 cut(s)	856, 1817
BsaXI	ACNNNNNCTCC	6 cut(s)	125, 155, 175, 205, 1965, 1995
Bsc4I	CCNNNNNNNGG	8 cut(s)	307, 362, 397, 1130, 1292, 1353, 1687, 1883
Bse118I	RCCGGY	1 cut(s)	1817
Bse1I	ACTGG	9 cut(s)	379, 381, 970, 1008, 1354, 1559, 1692, 1735, 2104
Bse3DI	GCAATG	2 cut(s)	957, 1482
Bse8I	GATNNNNATC	2 cut(s)	542, 1071
BseBI	CCWGG	2 cut(s)	663, 1748
BseCI	ATCGAT	1 cut(s)	1693
BseDI	CCNNGG	5 cut(s)	306, 1086, 1252, 1263, 1746
BseGI	GGATG	6 cut(s)	1060, 1156, 1384, 1434, 1625, 2038
BseJI	GATNNNNATC	2 cut(s)	542, 1071
BseLI	CCNNNNNNNGG	8 cut(s)	307, 362, 397, 1130, 1292, 1353, 1687, 1883
BseMI	GCAATG	2 cut(s)	957, 1482
BseMII	CTCAG	3 cut(s)	136, 459, 1548
BseNI	ACTGG	9 cut(s)	379, 381, 970, 1008, 1354, 1559, 1692, 1735, 2104
BseRI	GAGGAG	6 cut(s)	183, 206, 211, 214, 277, 280
BseSI	GKGCMC	1 cut(s)	1300
BseXI	GCAGC	5 cut(s)	517, 635, 1123, 1232, 1821
BseYI	CCCAGC	1 cut(s)	1382
BsgI	GTGCAG	2 cut(s)	702, 1738
Bsh1236I	CGCG	1 cut(s)	1440
Bsh1285I	CGRYCG	1 cut(s)	1306
BshFI	GGCC	2 cut(s)	182, 1260
BshNI	GGYRCC	1 cut(s)	1766
BshTI	ACCGGT	1 cut(s)	1817
BshVI	ATCGAT	1 cut(s)	1693
BsiEI	CGRYCG	1 cut(s)	1306
BsiHKAI	GWGCWC	1 cut(s)	1300
BsiHKCI	CYCGRG	1 cut(s)	722
BsiSI	CCGG	3 cut(s)	857, 1252, 1818
BslI	CCNNNNNNNGG	8 cut(s)	307, 362, 397, 1130, 1292, 1353, 1687, 1883
BsmAI	GTCTC	5 cut(s)	34, 195, 392, 1531, 1537
BsmI	GAATGC	2 cut(s)	33, 1757
BsnI	GGCC	2 cut(s)	182, 1260
Bso31I	GGTCTC	2 cut(s)	392, 1531
BsoBI	CYCGRG	1 cut(s)	722
Bsp119I	TTCGAA	1 cut(s)	1984
Bsp1286I	GDGCHC	1 cut(s)	1300
BspACI	CCGC	6 cut(s)	236, 279, 555, 1401, 1438, 2030
BspANI	GGCC	2 cut(s)	182, 1260
BspCNI	CTCAG	3 cut(s)	135, 460, 1547
BspDI	ATCGAT	1 cut(s)	1693
BspFNI	CGCG	1 cut(s)	1440
BspLI	GGNNCC	6 cut(s)	345, 379, 1006, 1261, 1344, 1768
BspMAI	CTGCAG	2 cut(s)	625, 1765
BspMI	ACCTGC	3 cut(s)	619, 724, 1754
BspPI	GGATC	8 cut(s)	311, 848, 1061, 1272, 1698, 1868, 1939, 1946
BspT104I	TTCGAA	1 cut(s)	1984
BspT107I	GGYRCC	1 cut(s)	1766
BspTNI	GGTCTC	2 cut(s)	392, 1531
BsrDI	GCAATG	2 cut(s)	957, 1482
BsrFI	RCCGGY	1 cut(s)	1817
BsrI	ACTGG	9 cut(s)	379, 381, 970, 1008, 1354, 1559, 1692, 1735, 2104
BssAI	RCCGGY	1 cut(s)	1817
BssECI	CCNNGG	5 cut(s)	306, 1086, 1252, 1263, 1746
BssT1I	CCWWGG	2 cut(s)	1086, 1263
Bst2UI	CCWGG	2 cut(s)	663, 1748
Bst4CI	ACNGT	7 cut(s)	310, 566, 707, 879, 924, 1981, 2119
Bst6I	CTCTTC	2 cut(s)	298, 1401
BstAPI	GCANNNNNTGC	4 cut(s)	788, 956, 1217, 1226
BstBAI	YACGTR	1 cut(s)	1866
BstBI	TTCGAA	1 cut(s)	1984
BstC8I	GCNNGC	3 cut(s)	652, 957, 1771
BstDEI	CTNAG	3 cut(s)	122, 468, 1534
BstDSI	CCRYGG	1 cut(s)	306
BstF5I	GGATG	6 cut(s)	1060, 1156, 1384, 1434, 1625, 2038
BstFNI	CGCG	1 cut(s)	1440
BstHHI	GCGC	1 cut(s)	535
BstMAI	GTCTC	5 cut(s)	34, 195, 392, 1531, 1537
BstMCI	CGRYCG	1 cut(s)	1306
BstMWI	GCNNNNNNNGC	8 cut(s)	620, 788, 956, 1217, 1226, 1235, 1466, 2042
BstNI	CCWGG	2 cut(s)	663, 1748
BstNSI	RCATGY	1 cut(s)	959
BstSCI	CCNGG	3 cut(s)	661, 1251, 1746
BstSFI	CTRYAG	3 cut(s)	621, 920, 1761
BstSLI	GKGCMC	1 cut(s)	1300
BstSNI	TACGTA	1 cut(s)	1866
BstUI	CGCG	1 cut(s)	1440
BstV1I	GCAGC	5 cut(s)	517, 635, 1123, 1232, 1821
BstV2I	GAAGAC	2 cut(s)	377, 908
BstX2I	RGATCY	2 cut(s)	853, 1066
BstXI	CCANNNNNNTGG	3 cut(s)	662, 991, 1093
BstYI	RGATCY	2 cut(s)	853, 1066
Bsu15I	ATCGAT	1 cut(s)	1693
BsuI	GTATCC	1 cut(s)	1688
BsuRI	GGCC	2 cut(s)	182, 1260
BsuTUI	ATCGAT	1 cut(s)	1693
BtgI	CCRYGG	1 cut(s)	306
BtsCI	GGATG	6 cut(s)	1060, 1156, 1384, 1434, 1625, 2038
BtsIMutI	CAGTG	7 cut(s)	388, 712, 844, 1347, 1552, 1869, 2097
BveI	ACCTGC	3 cut(s)	619, 724, 1754
Cac8I	GCNNGC	3 cut(s)	652, 957, 1771
CaiI	CAGNNNCTG	2 cut(s)	1205, 1427
CfoI	GCGC	1 cut(s)	535
Cfr10I	RCCGGY	1 cut(s)	1817
Cfr13I	GGNCC	4 cut(s)	668, 1121, 1259, 1815
ClaI	ATCGAT	1 cut(s)	1693
Csp6I	GTAC	1 cut(s)	1867
CspAI	ACCGGT	1 cut(s)	1817
CspCI	CAANNNNNGTGG	4 cut(s)	646, 681, 1492, 1527
CviAII	CATG	6 cut(s)	956, 1055, 1165, 1282, 2024, 2127
CviQI	GTAC	1 cut(s)	1867
DdeI	CTNAG	3 cut(s)	122, 468, 1534
DraI	TTTAAA	1 cut(s)	1621
Eam1104I	CTCTTC	2 cut(s)	298, 1401
EarI	CTCTTC	2 cut(s)	298, 1401
Eco105I	TACGTA	1 cut(s)	1866
Eco130I	CCWWGG	2 cut(s)	1086, 1263
Eco31I	GGTCTC	2 cut(s)	392, 1531
Eco47I	GGWCC	3 cut(s)	668, 1121, 1815
Eco57I	CTGAAG	6 cut(s)	136, 820, 916, 1182, 1636, 2108
Eco88I	CYCGRG	1 cut(s)	722
EcoRI	GAATTC	1 cut(s)	2093
EcoRII	CCWGG	2 cut(s)	661, 1746
EcoT14I	CCWWGG	2 cut(s)	1086, 1263
EcoT22I	ATGCAT	1 cut(s)	957
ErhI	CCWWGG	2 cut(s)	1086, 1263
FaeI	CATG	6 cut(s)	959, 1058, 1168, 1285, 2027, 2130
FatI	CATG	6 cut(s)	955, 1054, 1164, 1281, 2023, 2126
FauI	CCCGC	1 cut(s)	1394
FauNDI	CATATG	2 cut(s)	1081, 1454
FbaI	TGATCA	1 cut(s)	1429
Fnu4HI	GCNGC	7 cut(s)	279, 531, 555, 624, 1137, 1221, 1810
FokI	GGATG	6 cut(s)	1047, 1163, 1391, 1421, 1612, 2045
Fsp4HI	GCNGC	7 cut(s)	279, 531, 555, 624, 1137, 1221, 1810
FspBI	CTAG	2 cut(s)	1140, 1806
FspI	TGCGCA	1 cut(s)	534
GlaI	GCGC	1 cut(s)	534
GluI	GCNGC	7 cut(s)	279, 531, 555, 624, 1137, 1221, 1810
GsaI	CCCAGC	1 cut(s)	1386
GsuI	CTGGAG	1 cut(s)	1061
HaeIII	GGCC	2 cut(s)	182, 1260
HapII	CCGG	3 cut(s)	857, 1252, 1818
HhaI	GCGC	1 cut(s)	535
Hin1II	CATG	6 cut(s)	959, 1058, 1168, 1285, 2027, 2130
Hin6I	GCGC	1 cut(s)	533
HinP1I	GCGC	1 cut(s)	533
HincII	GTYRAC	4 cut(s)	606, 713, 799, 1099
HindII	GTYRAC	4 cut(s)	606, 713, 799, 1099
HindIII	AAGCTT	2 cut(s)	1180, 1325
HinfI	GANTC	9 cut(s)	23, 439, 455, 725, 913, 1016, 1168, 1202, 1757
HpaII	CCGG	3 cut(s)	857, 1252, 1818
HphI	GGTGA	4 cut(s)	412, 515, 1166, 1832
Hpy166II	GTNNAC	7 cut(s)	606, 668, 713, 799, 1099, 1298, 1869
Hpy8I	GTNNAC	7 cut(s)	606, 668, 713, 799, 1099, 1298, 1869
HpyAV	CCTTC	8 cut(s)	146, 160, 242, 356, 587, 1206, 1540, 2083
HpyCH4III	ACNGT	7 cut(s)	310, 566, 707, 879, 924, 1981, 2119
HpyCH4IV	ACGT	3 cut(s)	1510, 1839, 1865
HpyF10VI	GCNNNNNNNGC	8 cut(s)	620, 788, 956, 1217, 1226, 1235, 1466, 2042
HpyF3I	CTNAG	3 cut(s)	122, 468, 1534
HpySE526I	ACGT	3 cut(s)	1510, 1839, 1865
Hsp92II	CATG	6 cut(s)	959, 1058, 1168, 1285, 2027, 2130
HspAI	GCGC	1 cut(s)	533
Ksp22I	TGATCA	1 cut(s)	1429
LmnI	GCTCC	2 cut(s)	1004, 1973
Lsp1109I	GCAGC	5 cut(s)	517, 635, 1123, 1232, 1821
LweI	GCATC	8 cut(s)	336, 937, 1369, 1614, 1904, 2002, 2017, 2023
MaeI	CTAG	2 cut(s)	1140, 1806
MaeII	ACGT	3 cut(s)	1510, 1839, 1865
MaeIII	GTNAC	4 cut(s)	512, 961, 1189, 1820
MboII	GAAGA	9 cut(s)	42, 54, 285, 288, 382, 908, 1418, 1581, 1781
MfeI	CAATTG	1 cut(s)	357
MflI	RGATCY	2 cut(s)	853, 1066
MhlI	GDGCHC	1 cut(s)	1300
MlyI	GAGTC	4 cut(s)	734, 922, 1196, 1766
MmeI	TCCRAC	2 cut(s)	861, 1334
Mph1103I	ATGCAT	1 cut(s)	957
MroXI	GAANNNNTTC	4 cut(s)	1239, 1423, 1963, 2093
MseI	TTAA	7 cut(s)	45, 336, 519, 690, 696, 1620, 1727
MslI	CAYNNNNRTG	1 cut(s)	989
MspI	CCGG	3 cut(s)	857, 1252, 1818
MspR9I	CCNGG	3 cut(s)	663, 1253, 1748
MunI	CAATTG	1 cut(s)	357
Mva1269I	GAATGC	2 cut(s)	33, 1757
MvaI	CCWGG	2 cut(s)	663, 1748
MvnI	CGCG	1 cut(s)	1440
MwoI	GCNNNNNNNGC	8 cut(s)	620, 788, 956, 1217, 1226, 1235, 1466, 2042
NciI	CCSGG	1 cut(s)	1253
NdeI	CATATG	2 cut(s)	1081, 1454
NlaIII	CATG	6 cut(s)	959, 1058, 1168, 1285, 2027, 2130
NlaIV	GGNNCC	6 cut(s)	345, 379, 1006, 1261, 1344, 1768
NmuCI	GTSAC	2 cut(s)	1189, 1820
NsbI	TGCGCA	1 cut(s)	534
NsiI	ATGCAT	1 cut(s)	957
NspI	RCATGY	1 cut(s)	959
NspV	TTCGAA	1 cut(s)	1984
PaeI	GCATGC	1 cut(s)	959
PaqCI	CACCTGC	2 cut(s)	619, 1754
PctI	GAATGC	2 cut(s)	33, 1757
PdmI	GAANNNNTTC	4 cut(s)	1239, 1423, 1963, 2093
PfeI	GAWTC	5 cut(s)	23, 439, 455, 1016, 1168
PflMI	CCANNNNNTGG	3 cut(s)	1292, 1353, 1687
PinAI	ACCGGT	1 cut(s)	1817
PkrI	GCNGC	7 cut(s)	280, 532, 556, 625, 1138, 1222, 1811
Ple19I	CGATCG	1 cut(s)	1306
PleI	GAGTC	4 cut(s)	733, 921, 1196, 1765
PpsI	GAGTC	4 cut(s)	733, 921, 1196, 1765
Ppu21I	YACGTR	1 cut(s)	1866
PshBI	ATTAAT	1 cut(s)	336
Psp6I	CCWGG	2 cut(s)	661, 1746
PspFI	CCCAGC	1 cut(s)	1382
PspGI	CCWGG	2 cut(s)	661, 1746
PspN4I	GGNNCC	6 cut(s)	345, 379, 1006, 1261, 1344, 1768
PspPI	GGNCC	4 cut(s)	668, 1121, 1259, 1815
PstI	CTGCAG	2 cut(s)	625, 1765
PstNI	CAGNNNCTG	2 cut(s)	1205, 1427
PsuI	RGATCY	2 cut(s)	853, 1066
PvuI	CGATCG	1 cut(s)	1306
RsaI	GTAC	1 cut(s)	1868
RsaNI	GTAC	1 cut(s)	1867
RseI	CAYNNNNRTG	1 cut(s)	989
SaqAI	TTAA	7 cut(s)	45, 336, 519, 690, 696, 1620, 1727
SatI	GCNGC	7 cut(s)	279, 531, 555, 624, 1137, 1221, 1810
Sau96I	GGNCC	4 cut(s)	668, 1121, 1259, 1815
SchI	GAGTC	4 cut(s)	734, 922, 1196, 1766
ScrFI	CCNGG	3 cut(s)	663, 1253, 1748
SduI	GDGCHC	1 cut(s)	1300
SfaNI	GCATC	8 cut(s)	336, 937, 1369, 1614, 1904, 2002, 2017, 2023
SfcI	CTRYAG	3 cut(s)	621, 920, 1761
SfuI	TTCGAA	1 cut(s)	1984
SinI	GGWCC	3 cut(s)	668, 1121, 1815
SmiMI	CAYNNNNRTG	1 cut(s)	989
SmlI	CTYRAG	1 cut(s)	100
SmoI	CTYRAG	1 cut(s)	100
SnaBI	TACGTA	1 cut(s)	1866
SphI	GCATGC	1 cut(s)	959
SsiI	CCGC	6 cut(s)	236, 279, 555, 1401, 1438, 2030
SspMI	CTAG	2 cut(s)	1140, 1806
StyD4I	CCNGG	3 cut(s)	661, 1251, 1746
StyI	CCWWGG	2 cut(s)	1086, 1263
TaaI	ACNGT	7 cut(s)	310, 566, 707, 879, 924, 1981, 2119
TaiI	ACGT	3 cut(s)	1513, 1842, 1868
TaqI	TCGA	9 cut(s)	1276, 1302, 1492, 1585, 1693, 1792, 1898, 1984, 2081
TauI	GCSGC	2 cut(s)	281, 557
TfiI	GAWTC	5 cut(s)	23, 439, 455, 1016, 1168
Tru1I	TTAA	7 cut(s)	45, 336, 519, 690, 696, 1620, 1727
Tru9I	TTAA	7 cut(s)	45, 336, 519, 690, 696, 1620, 1727
TscAI	CASTG	7 cut(s)	388, 712, 844, 1354, 1559, 1876, 2104
TseFI	GTSAC	2 cut(s)	1189, 1820
TseI	GCWGC	5 cut(s)	530, 623, 1136, 1220, 1809
Tsp45I	GTSAC	2 cut(s)	1189, 1820
TspDTI	ATGAA	2 cut(s)	1611, 2019
TspGWI	ACGGA	1 cut(s)	762
TspRI	CASTG	7 cut(s)	388, 712, 844, 1354, 1559, 1876, 2104
Van91I	CCANNNNNTGG	3 cut(s)	1292, 1353, 1687
VneI	GTGCAC	1 cut(s)	1296
VpaK11BI	GGWCC	3 cut(s)	668, 1121, 1815
VspI	ATTAAT	1 cut(s)	336
XapI	RAATTY	5 cut(s)	576, 597, 1573, 1986, 2093
XceI	RCATGY	1 cut(s)	959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	662
XmnI	GAANNNNTTC	4 cut(s)	1239, 1423, 1963, 2093
XspI	CTAG	2 cut(s)	1140, 1806
Zsp2I	ATGCAT	1 cut(s)	957

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.