Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0013507

Physical Location & Seq

Genomic Coordinates Reverse (-)

63886129 .. 63891258

Gene Structure 5130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G036000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGCACTTTCTCTCAGACTACACACCCTTCTCTCCACCACTTCCAGACCCAACTTTTCATCAAATGCCACTCTCACTCCTCCAAACCCATCTCTCTCTCTCTTCTCCTCCTCCTCCTCACTTCTTCCCCACCACCTCCCTCTCAGAACCCCACACTCCCTCACCGTCAAAGCCGCCTCTTCTCCAGCAACCGTAGCAGAGCCCAAGGGCATCAAGATTAATTTGGTTCCCACCAAACCGATCGAAGGCCAGAAGACCGGAACCAGCGGTCTCCGAAAGAAGGTGAAAGTTTTTCAGCAAGAGAATTACCTTGCCAATTGGATCCAGGCGTTATTTGATTCATTGCCACCAGAAGATTACAAGGATGGTTTACTGGTGTTGGGAGGTGATGGTCGTTACTTTAATCGTGAAGCTGCACAGATTATCATCAAAATTGCCGCAGGGAATGGTGTTGGGAAAATTTTGGTTGGCAAGGAAGGAATTTTGTCAACACCTGCTGTTTCTGCTGTTATCCGCAAGAGGAAGGCCAATGGTGGTTTTATAATGAGTGCAAGCCACAATCCTGGTGGACCTGATTATGATTGGGGTATTAAGTTTAATTACAGTAGCGGACAACCTGCACCTGAGTCCATCACTGACAAGATTTATGGAAACACTCTTTCTATCTCGGAAATAAAGATAGCAGACATCGCTGATGTTGACTTATCTTCTGTTGGAGTTATAAACTATGGAAATTTCACTGTTGAAGTTATTGATCCAGTTACTGACTACTTGGAACTAATGGAGAATGTATTTGATTTCCAGCTTATCAAAAATTTTCTGAAGTTAGACTTCAGGTTTCTATTTGATGCCATGCATGCTGTTACTGGTGCTTATGCAAAACCCATCTTTGTGGATAAACTGGGAGCCACTCCGACATGTCATGTAGGATTCAATTTCAAATGGAGTGCCTCTAGAGGATTTTGGCATGGTCATCCAGATCCTAATCTCACGTATGCTAAGGATCTCGTCGATGTTTTGTACAGTAAAAATGGACCCGACTTTGGAGCCGCAAGTGATGGGGATGGTGATAGAAACATGATTCTTGGTAAAGGCTTTTTTGTTACTCCTTCAGACTCTGTTGCAATTATCGCAGCCAATGCTCAAGAAACTATTCCATATTTTCAGAGTGGCCCCAAGGGATTAGCACGGTCCATGCCAACAAGCGGTGCACTTGATCGTGTTGCTGAAAAGTTAAAGCTTCCTTTCTTTGAGGTTCCCACTGGTTGGAAGTTCTTTGGGAATCTTATGGATGCTGGGAAGTTATCTATATGTGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATCCGCGAGAAGGATGGCATATGGGCTGTCTTAGCTTGGCTTTCTATCATTGCATATCGGAACAAAGACAAAAAACCTGGCGAGAAGTTGGTCTCTGTTGCAGACGTTGTGAAGGAACACTGGGCAACCTATGGAAGAAATTTCTTTTCTCGATATGACTATGAAGAATGTGCGTCTGAAGGTGCCAATAAGATGATAAATCATCTTAGAGAATTAATCTCTAGGAGCAAGCCTGGTGAAAAGTTTGGAAATTATGCTCTCAAATTTGCCGATGACTTCACCTATACTGATCCTGTTGATGAAAGTGTGGCATCAAAGCAAGGTGTTCGGTTTGTTTTTACTGATGGATCGAGGATCATATTTCGTTTATCAGGAACAGGTTCAGCAGGAGCAACTATTCGAATATACATTGAACAGTATGAACCAGATGTCTCCAAACATGATGAGGACGCCCAAGTGGCACTGAAACCCTTAATAGATTTGGCATTGTCTGTATCGAAGCTGAAGGAGTTCACTGGAAGGGAGAAGCCCACAGTCATCACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0004614 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0005982 GO:0005996 GO:0006006 GO:0006012 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009250 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009581 GO:0009582 GO:0009590 GO:0009605 GO:0009628 GO:0009629 GO:0009941 GO:0009987 GO:0010319 GO:0015980 GO:0016051 GO:0016052 GO:0016853 GO:0016866 GO:0016868 GO:0019252 GO:0019318 GO:0019320 GO:0019388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046365 GO:0048046 GO:0050896 GO:0051606 GO:0055114 GO:0071704 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00052 ko00230 ko00500 ko00520 ko00521 ko01100 ko01110 ko01120 ko01130 map00010 map00030 map00052 map00230 map00500 map00520 map00521 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

PGM_PMM_I PGM_PMM_II PGM_PMM_III PGM_PMM_IV

Protein Analysis

630

Amino Acids

68.91

Weight (kDa)

7.22

Isoelectric Point (pI)

25.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PGM_PMM_I	PF02878	84 - 223	2e-33	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II	PF02879	256 - 362	3.8e-09	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III	PF02880	371 - 474	3.2e-22	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM1_C_vert_fung	PF24947	495 - 627	5.1e-51	Phosphoglucomutase-1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51820
fragaria_vesca	FvH4_7g28680 FvH4_7g28680
malus_domestica	MD00G1003800.v1.1 MD01G1192300.v1.1
prunus_persica	Prupe.2G286900_v2.0.a1
pyrus_communis	pycom01g20350 pycom07g23920
rosa_chinensis	RchiOBHm_Chr1g0376171
rosa_laevigata	RLG00000026623
rosa_multiflora	Rmu_ssc0000116.1_g000052
rosa_roxburghii	Rroxscaffold_4G00282330
rosa_rugosa	Rorug01G0394200
rosa_samantha	Rh1AG405800 Rh1BG369500 Rh1CG382200 Rh1DG399100
rosa_wichuraiana	Rw1G036000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	542, 722
AarI	CACCTGC	1 cut(s)	502
Acc36I	ACCTGC	2 cut(s)	502, 625
AccB1I	GGYRCC	1 cut(s)	1529
AccB7I	CCANNNNNTGG	1 cut(s)	1266
AccII	CGCG	1 cut(s)	1353
AciI	CCGC	8 cut(s)	174, 267, 438, 514, 609, 1050, 1206, 1351
AclWI	GGATC	8 cut(s)	316, 329, 749, 974, 1011, 1631, 1702, 1709
AcsI	RAATTY	6 cut(s)	459, 480, 733, 814, 1486, 1610
AcuI	CTGAAG	5 cut(s)	817, 842, 1095, 1545, 1871
AcyI	GRCGYC	1 cut(s)	1797
AfaI	GTAC	1 cut(s)	1022
AfiI	CCNNNNNNNGG	6 cut(s)	245, 280, 1043, 1205, 1266, 1357
AflIII	ACRYGT	1 cut(s)	917
AgsI	TTSAA	4 cut(s)	746, 934, 940, 1760
AjnI	CCWGG	4 cut(s)	324, 562, 1423, 1579
AjuI	GAANNNNNNNTTGG	2 cut(s)	1311, 1343
AluBI	AGCT	5 cut(s)	413, 805, 1240, 1382, 1849
AluI	AGCT	5 cut(s)	413, 805, 1240, 1382, 1849
Alw21I	GWGCWC	1 cut(s)	1213
Alw26I	GTCTC	3 cut(s)	275, 1444, 1783
Alw44I	GTGCAC	1 cut(s)	1209
AlwI	GGATC	8 cut(s)	316, 329, 749, 974, 1011, 1631, 1702, 1709
AlwNI	CAGNNNCTG	3 cut(s)	764, 1118, 1340
AoxI	GGCC	3 cut(s)	247, 525, 1171
ApaLI	GTGCAC	1 cut(s)	1209
ApeKI	GCWGC	2 cut(s)	413, 1133
ApoI	RAATTY	6 cut(s)	459, 480, 733, 814, 1486, 1610
AseI	ATTAAT	2 cut(s)	219, 1562
Asp700I	GAANNNNTTC	4 cut(s)	1152, 1336, 1726, 1856
AspS9I	GGNCC	4 cut(s)	569, 1034, 1172, 1191
AsuHPI	GGTGA	6 cut(s)	154, 295, 398, 1079, 1595, 1618
AsuII	TTCGAA	1 cut(s)	1747
AvaII	GGWCC	3 cut(s)	569, 1034, 1191
BaeGI	GKGCMC	1 cut(s)	1213
BamHI	GGATCC	1 cut(s)	321
BanI	GGYRCC	1 cut(s)	1529
BanII	GRGCYC	1 cut(s)	204
BbsI	GAAGAC	1 cut(s)	260
Bbv12I	GWGCWC	1 cut(s)	1213
BbvI	GCAGC	2 cut(s)	400, 1145
BccI	CCATC	9 cut(s)	97, 359, 383, 638, 893, 1052, 1058, 1355, 1685
BcgI	CGANNNNNNTGC	2 cut(s)	1655, 1689
BciT130I	CCWGG	4 cut(s)	326, 564, 1425, 1581
BcoDI	GTCTC	3 cut(s)	275, 1444, 1783
BfaI	CTAG	2 cut(s)	954, 1569
BfuAI	ACCTGC	2 cut(s)	502, 625
BglI	GCCNNNNNGGC	1 cut(s)	1805
BisI	GCNGC	5 cut(s)	174, 414, 438, 1050, 1134
BlsI	GCNGC	5 cut(s)	175, 415, 439, 1051, 1135
Bme1390I	CCNGG	4 cut(s)	326, 564, 1425, 1581
Bme18I	GGWCC	3 cut(s)	569, 1034, 1191
BmgT120I	GGNCC	4 cut(s)	569, 1034, 1172, 1191
BmiI	GGNNCC	9 cut(s)	228, 262, 323, 907, 1036, 1048, 1174, 1257, 1531
BmrFI	CCNGG	4 cut(s)	326, 564, 1425, 1581
BmrI	ACTGGG	2 cut(s)	911, 1477
BmsI	GCATC	4 cut(s)	219, 838, 1282, 1667
BmuI	ACTGGG	2 cut(s)	911, 1477
BpiI	GAAGAC	1 cut(s)	260
BpmI	CTGGAG	1 cut(s)	168
Bpu10I	CCTNAGC	1 cut(s)	999
Bpu14I	TTCGAA	1 cut(s)	1747
BpuEI	CTTGAG	1 cut(s)	1128
BsaAI	YACGTR	1 cut(s)	993
BsaBI	GATNNNNATC	2 cut(s)	425, 984
BsaHI	GRCGYC	1 cut(s)	1797
BsaI	GGTCTC	2 cut(s)	275, 1444
BsaJI	CCNNGG	2 cut(s)	204, 1176
BsaWI	WCCGGW	1 cut(s)	257
BsaXI	ACNNNNNCTCC	2 cut(s)	61, 91
Bsc4I	CCNNNNNNNGG	6 cut(s)	245, 280, 1043, 1205, 1266, 1357
Bse1I	ACTGG	7 cut(s)	378, 758, 871, 906, 1267, 1472, 1867
Bse3DI	GCAATG	2 cut(s)	341, 1395
Bse8I	GATNNNNATC	2 cut(s)	425, 984
BseBI	CCWGG	4 cut(s)	326, 564, 1425, 1581
BseDI	CCNNGG	2 cut(s)	204, 1176
BseGI	GGATG	6 cut(s)	370, 973, 1069, 1297, 1347, 1366
BseJI	GATNNNNATC	2 cut(s)	425, 984
BseLI	CCNNNNNNNGG	6 cut(s)	245, 280, 1043, 1205, 1266, 1357
BseMI	GCAATG	2 cut(s)	341, 1395
BseMII	CTCAG	3 cut(s)	28, 157, 615
BseNI	ACTGG	7 cut(s)	378, 758, 871, 906, 1267, 1472, 1867
BseRI	GAGGAG	5 cut(s)	69, 97, 100, 103, 106
BseSI	GKGCMC	1 cut(s)	1213
BseXI	GCAGC	2 cut(s)	400, 1145
BseYI	CCCAGC	1 cut(s)	1295
BsgI	GTGCAG	2 cut(s)	399, 603
Bsh1236I	CGCG	1 cut(s)	1353
Bsh1285I	CGRYCG	1 cut(s)	243
BshFI	GGCC	3 cut(s)	249, 527, 1173
BshNI	GGYRCC	1 cut(s)	1529
BsiEI	CGRYCG	1 cut(s)	243
BsiHKAI	GWGCWC	1 cut(s)	1213
BsiSI	CCGG	1 cut(s)	258
BslI	CCNNNNNNNGG	6 cut(s)	245, 280, 1043, 1205, 1266, 1357
BsmAI	GTCTC	3 cut(s)	275, 1444, 1783
BsnI	GGCC	3 cut(s)	249, 527, 1173
Bso31I	GGTCTC	2 cut(s)	275, 1444
Bsp119I	TTCGAA	1 cut(s)	1747
Bsp1286I	GDGCHC	2 cut(s)	204, 1213
Bsp1407I	TGTACA	1 cut(s)	1020
Bsp143I	GATC	9 cut(s)	240, 321, 754, 979, 1003, 1216, 1636, 1694, 1701
BspACI	CCGC	8 cut(s)	174, 267, 438, 514, 609, 1050, 1206, 1351
BspANI	GGCC	3 cut(s)	249, 527, 1173
BspCNI	CTCAG	3 cut(s)	27, 156, 616
BspFNI	CGCG	1 cut(s)	1353
BspLI	GGNNCC	9 cut(s)	228, 262, 323, 907, 1036, 1048, 1174, 1257, 1531
BspMI	ACCTGC	2 cut(s)	502, 625
BspPI	GGATC	8 cut(s)	316, 329, 749, 974, 1011, 1631, 1702, 1709
BspT104I	TTCGAA	1 cut(s)	1747
BspT107I	GGYRCC	1 cut(s)	1529
BspTNI	GGTCTC	2 cut(s)	275, 1444
BsrDI	GCAATG	2 cut(s)	341, 1395
BsrGI	TGTACA	1 cut(s)	1020
BsrI	ACTGG	7 cut(s)	378, 758, 871, 906, 1267, 1472, 1867
BssECI	CCNNGG	2 cut(s)	204, 1176
BssMI	GATC	9 cut(s)	240, 321, 754, 979, 1003, 1216, 1636, 1694, 1701
BssNI	GRCGYC	1 cut(s)	1797
BssT1I	CCWWGG	2 cut(s)	204, 1176
Bst2UI	CCWGG	4 cut(s)	326, 564, 1425, 1581
Bst4CI	ACNGT	8 cut(s)	166, 193, 605, 742, 1025, 1191, 1764, 1882
Bst6I	CTCTTC	3 cut(s)	107, 184, 1314
BstACI	GRCGYC	1 cut(s)	1797
BstAPI	GCANNNNNTGC	1 cut(s)	1139
BstAUI	TGTACA	1 cut(s)	1020
BstBAI	YACGTR	1 cut(s)	993
BstBI	TTCGAA	1 cut(s)	1747
BstC8I	GCNNGC	3 cut(s)	553, 858, 1577
BstDEI	CTNAG	6 cut(s)	14, 143, 624, 999, 1378, 1553
BstF5I	GGATG	6 cut(s)	370, 973, 1069, 1297, 1347, 1366
BstFNI	CGCG	1 cut(s)	1353
BstKTI	GATC	9 cut(s)	243, 324, 757, 982, 1006, 1219, 1639, 1697, 1704
BstMAI	GTCTC	3 cut(s)	275, 1444, 1783
BstMBI	GATC	9 cut(s)	240, 321, 754, 979, 1003, 1216, 1636, 1694, 1701
BstMCI	CGRYCG	1 cut(s)	243
BstMWI	GCNNNNNNNGC	8 cut(s)	194, 503, 689, 857, 1130, 1139, 1379, 1805
BstNI	CCWGG	4 cut(s)	326, 564, 1425, 1581
BstNSI	RCATGY	2 cut(s)	860, 921
BstSCI	CCNGG	4 cut(s)	324, 562, 1423, 1579
BstSLI	GKGCMC	1 cut(s)	1213
BstUI	CGCG	1 cut(s)	1353
BstV1I	GCAGC	2 cut(s)	400, 1145
BstV2I	GAAGAC	1 cut(s)	260
BstX2I	RGATCY	3 cut(s)	321, 979, 1003
BstXI	CCANNNNNNTGG	2 cut(s)	563, 892
BstYI	RGATCY	3 cut(s)	321, 979, 1003
BsuRI	GGCC	3 cut(s)	249, 527, 1173
BtgZI	GCGATG	1 cut(s)	673
BtsCI	GGATG	6 cut(s)	370, 973, 1069, 1297, 1347, 1366
BtsIMutI	CAGTG	6 cut(s)	633, 738, 1260, 1465, 1808, 1860
BveI	ACCTGC	2 cut(s)	502, 625
Cac8I	GCNNGC	3 cut(s)	553, 858, 1577
CaiI	CAGNNNCTG	3 cut(s)	764, 1118, 1340
Cfr13I	GGNCC	4 cut(s)	569, 1034, 1172, 1191
CseI	GACGC	2 cut(s)	1509, 1805
Csp6I	GTAC	1 cut(s)	1021
CspCI	CAANNNNNGTGG	2 cut(s)	547, 582
CviAII	CATG	8 cut(s)	853, 857, 918, 923, 968, 1078, 1195, 1787
CviQI	GTAC	1 cut(s)	1021
DdeI	CTNAG	6 cut(s)	14, 143, 624, 999, 1378, 1553
DpnI	GATC	9 cut(s)	242, 323, 756, 981, 1005, 1218, 1638, 1696, 1703
DpnII	GATC	9 cut(s)	240, 321, 754, 979, 1003, 1216, 1636, 1694, 1701
Eam1104I	CTCTTC	3 cut(s)	107, 184, 1314
EarI	CTCTTC	3 cut(s)	107, 184, 1314
Eco130I	CCWWGG	2 cut(s)	204, 1176
Eco24I	GRGCYC	1 cut(s)	204
Eco31I	GGTCTC	2 cut(s)	275, 1444
Eco47I	GGWCC	3 cut(s)	569, 1034, 1191
Eco57I	CTGAAG	5 cut(s)	817, 842, 1095, 1545, 1871
EcoRII	CCWGG	4 cut(s)	324, 562, 1423, 1579
EcoT14I	CCWWGG	2 cut(s)	204, 1176
EcoT22I	ATGCAT	1 cut(s)	858
EcoT38I	GRGCYC	1 cut(s)	204
ErhI	CCWWGG	2 cut(s)	204, 1176
FaeI	CATG	8 cut(s)	856, 860, 921, 926, 971, 1081, 1198, 1790
FalI	AAGNNNNNCTT	2 cut(s)	815, 847
FatI	CATG	8 cut(s)	852, 856, 917, 922, 967, 1077, 1194, 1786
FauNDI	CATATG	1 cut(s)	1367
Fnu4HI	GCNGC	5 cut(s)	174, 414, 438, 1050, 1134
FokI	GGATG	6 cut(s)	377, 960, 1076, 1304, 1334, 1373
FriOI	GRGCYC	1 cut(s)	204
Fsp4HI	GCNGC	5 cut(s)	174, 414, 438, 1050, 1134
FspBI	CTAG	2 cut(s)	954, 1569
GluI	GCNGC	5 cut(s)	174, 414, 438, 1050, 1134
GsaI	CCCAGC	1 cut(s)	1299
GsuI	CTGGAG	1 cut(s)	168
HaeIII	GGCC	3 cut(s)	249, 527, 1173
HapII	CCGG	1 cut(s)	258
HgaI	GACGC	2 cut(s)	1509, 1805
Hin1I	GRCGYC	1 cut(s)	1797
Hin1II	CATG	8 cut(s)	856, 860, 921, 926, 971, 1081, 1198, 1790
HincII	GTYRAC	2 cut(s)	489, 700
HindII	GTYRAC	2 cut(s)	489, 700
HindIII	AAGCTT	1 cut(s)	1238
HinfI	GANTC	6 cut(s)	338, 626, 930, 1081, 1115, 1282
HpaII	CCGG	1 cut(s)	258
HphI	GGTGA	6 cut(s)	154, 295, 398, 1079, 1595, 1618
Hpy166II	GTNNAC	6 cut(s)	371, 489, 569, 700, 1211, 1860
Hpy188III	TCNNGA	8 cut(s)	45, 214, 407, 954, 977, 1145, 1497, 1719
Hpy8I	GTNNAC	6 cut(s)	371, 489, 569, 700, 1211, 1860
Hpy99I	CGWCG	1 cut(s)	1013
HpyCH4III	ACNGT	8 cut(s)	166, 193, 605, 742, 1025, 1191, 1764, 1882
HpyCH4IV	ACGT	2 cut(s)	992, 1452
HpyCH4V	TGCA	9 cut(s)	416, 551, 620, 856, 878, 1124, 1211, 1400, 1448
HpyF10VI	GCNNNNNNNGC	8 cut(s)	194, 503, 689, 857, 1130, 1139, 1379, 1805
HpyF3I	CTNAG	6 cut(s)	14, 143, 624, 999, 1378, 1553
HpySE526I	ACGT	2 cut(s)	992, 1452
Hsp92I	GRCGYC	1 cut(s)	1797
Hsp92II	CATG	8 cut(s)	856, 860, 921, 926, 971, 1081, 1198, 1790
Kzo9I	GATC	9 cut(s)	240, 321, 754, 979, 1003, 1216, 1636, 1694, 1701
LmnI	GCTCC	4 cut(s)	905, 1046, 1572, 1736
Lsp1109I	GCAGC	2 cut(s)	400, 1145
LweI	GCATC	4 cut(s)	219, 838, 1282, 1667
MaeI	CTAG	2 cut(s)	954, 1569
MaeII	ACGT	2 cut(s)	992, 1452
MaeIII	GTNAC	4 cut(s)	395, 760, 862, 1102
MalI	GATC	9 cut(s)	242, 323, 756, 981, 1005, 1218, 1638, 1696, 1703
MboI	GATC	9 cut(s)	240, 321, 754, 979, 1003, 1216, 1636, 1694, 1701
MboII	GAAGA	9 cut(s)	94, 116, 171, 265, 365, 699, 1331, 1494, 1523
MfeI	CAATTG	1 cut(s)	316
MflI	RGATCY	3 cut(s)	321, 979, 1003
MhlI	GDGCHC	2 cut(s)	204, 1213
MlyI	GAGTC	2 cut(s)	635, 1109
MmeI	TCCRAC	3 cut(s)	694, 938, 1247
Mph1103I	ATGCAT	1 cut(s)	858
MroXI	GAANNNNTTC	4 cut(s)	1152, 1336, 1726, 1856
MseI	TTAA	7 cut(s)	219, 402, 591, 597, 1235, 1562, 1820
MslI	CAYNNNNRTG	1 cut(s)	890
MspA1I	CMGCKG	1 cut(s)	267
MspI	CCGG	1 cut(s)	258
MspR9I	CCNGG	4 cut(s)	326, 564, 1425, 1581
MunI	CAATTG	1 cut(s)	316
MvaI	CCWGG	4 cut(s)	326, 564, 1425, 1581
MvnI	CGCG	1 cut(s)	1353
MwoI	GCNNNNNNNGC	8 cut(s)	194, 503, 689, 857, 1130, 1139, 1379, 1805
NdeI	CATATG	1 cut(s)	1367
NdeII	GATC	9 cut(s)	240, 321, 754, 979, 1003, 1216, 1636, 1694, 1701
NlaIII	CATG	8 cut(s)	856, 860, 921, 926, 971, 1081, 1198, 1790
NlaIV	GGNNCC	9 cut(s)	228, 262, 323, 907, 1036, 1048, 1174, 1257, 1531
NsiI	ATGCAT	1 cut(s)	858
NspI	RCATGY	2 cut(s)	860, 921
NspV	TTCGAA	1 cut(s)	1747
PaeI	GCATGC	1 cut(s)	860
PaqCI	CACCTGC	1 cut(s)	502
PciI	ACATGT	1 cut(s)	917
PdmI	GAANNNNTTC	4 cut(s)	1152, 1336, 1726, 1856
PfeI	GAWTC	4 cut(s)	338, 930, 1081, 1282
PflMI	CCANNNNNTGG	1 cut(s)	1266
PkrI	GCNGC	5 cut(s)	175, 415, 439, 1051, 1135
Ple19I	CGATCG	1 cut(s)	243
PleI	GAGTC	2 cut(s)	634, 1109
PpsI	GAGTC	2 cut(s)	634, 1109
Ppu21I	YACGTR	1 cut(s)	993
PscI	ACATGT	1 cut(s)	917
PshBI	ATTAAT	2 cut(s)	219, 1562
PsiI	TTATAA	2 cut(s)	542, 722
Psp6I	CCWGG	4 cut(s)	324, 562, 1423, 1579
PspFI	CCCAGC	1 cut(s)	1295
PspGI	CCWGG	4 cut(s)	324, 562, 1423, 1579
PspN4I	GGNNCC	9 cut(s)	228, 262, 323, 907, 1036, 1048, 1174, 1257, 1531
PspPI	GGNCC	4 cut(s)	569, 1034, 1172, 1191
PstNI	CAGNNNCTG	3 cut(s)	764, 1118, 1340
PsuI	RGATCY	3 cut(s)	321, 979, 1003
PvuI	CGATCG	1 cut(s)	243
RsaI	GTAC	1 cut(s)	1022
RsaNI	GTAC	1 cut(s)	1021
RseI	CAYNNNNRTG	1 cut(s)	890
SaqAI	TTAA	7 cut(s)	219, 402, 591, 597, 1235, 1562, 1820
SatI	GCNGC	5 cut(s)	174, 414, 438, 1050, 1134
Sau3AI	GATC	9 cut(s)	240, 321, 754, 979, 1003, 1216, 1636, 1694, 1701
Sau96I	GGNCC	4 cut(s)	569, 1034, 1172, 1191
SchI	GAGTC	2 cut(s)	635, 1109
ScrFI	CCNGG	4 cut(s)	326, 564, 1425, 1581
SduI	GDGCHC	2 cut(s)	204, 1213
SfaNI	GCATC	4 cut(s)	219, 838, 1282, 1667
SfuI	TTCGAA	1 cut(s)	1747
SinI	GGWCC	3 cut(s)	569, 1034, 1191
SmiMI	CAYNNNNRTG	1 cut(s)	890
SmlI	CTYRAG	1 cut(s)	1143
SmoI	CTYRAG	1 cut(s)	1143
SphI	GCATGC	1 cut(s)	860
SsiI	CCGC	8 cut(s)	174, 267, 438, 514, 609, 1050, 1206, 1351
SspMI	CTAG	2 cut(s)	954, 1569
StyD4I	CCNGG	4 cut(s)	324, 562, 1423, 1579
StyI	CCWWGG	2 cut(s)	204, 1176
TaaI	ACNGT	8 cut(s)	166, 193, 605, 742, 1025, 1191, 1764, 1882
TaiI	ACGT	2 cut(s)	995, 1455
TaqI	TCGA	6 cut(s)	243, 1011, 1498, 1697, 1747, 1844
TatI	WGTACW	1 cut(s)	1020
TauI	GCSGC	3 cut(s)	176, 440, 1052
TfiI	GAWTC	4 cut(s)	338, 930, 1081, 1282
Tru1I	TTAA	7 cut(s)	219, 402, 591, 597, 1235, 1562, 1820
Tru9I	TTAA	7 cut(s)	219, 402, 591, 597, 1235, 1562, 1820
TscAI	CASTG	6 cut(s)	640, 745, 1267, 1472, 1815, 1867
TseI	GCWGC	2 cut(s)	413, 1133
TspDTI	ATGAA	5 cut(s)	48, 330, 1524, 1662, 1782
TspRI	CASTG	6 cut(s)	640, 745, 1267, 1472, 1815, 1867
Van91I	CCANNNNNTGG	1 cut(s)	1266
VneI	GTGCAC	1 cut(s)	1209
VpaK11BI	GGWCC	3 cut(s)	569, 1034, 1191
VspI	ATTAAT	2 cut(s)	219, 1562
XapI	RAATTY	6 cut(s)	459, 480, 733, 814, 1486, 1610
XbaI	TCTAGA	1 cut(s)	953
XceI	RCATGY	2 cut(s)	860, 921
XcmI	CCANNNNNNNNNTGG	1 cut(s)	563
XmnI	GAANNNNTTC	4 cut(s)	1152, 1336, 1726, 1856
XspI	CTAG	2 cut(s)	954, 1569
Zsp2I	ATGCAT	1 cut(s)	858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.