Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0013507

Physical Location & Seq

Genomic Coordinates Reverse (-)

61896494 .. 61902119

Gene Structure 5626 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG399100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGCACTTTCTCTCAGACTACACACCCTTCTCTCCACCACTTCCAGACTCAACTTTTCATCAAATGCCACTCTCACTCCTCCAAACCCATCTCTCTCTCTCTTCTCCTCCTCCTCCTCATTTCTTCCCCACCACCTCCCTCTCAGAACCCCACACTCCCTTACCATCAAAGCCGCCTCTTCTCCAGCAACCGTAGCAGAGCCCAAGGGCATCAAGATTAATTTGGTTCCCACCAAACCGATCGAAGGCCAGAAGACCGGAACCAGCGGTCTCCGAAAGAAGGTGAAAGTTTTTCAGCATGAGAATTACCTTGCCAATTGGATCCAGGCGTTATTTGATTCATTGCCACCAGAGGATTACAAGGATGGTTTACTGGTGTTGGGAGGTGATGGTCGTTACTTTAATCGTGAAGCTGCACAGATTATCATCAAAATTGCCGCAGGGAATGGTGTTGGGAAAATTTTGGTTGGCAAGGAAGGAATTTTGTCAACACCTGCTGTTTCTGCTGTTATCCGCAAGAGGAAGGCCAATGGTGGTTTTATAATGAGTGCAAGCCACAATCCTGGTGGACCTGATTATGATTGGGGTATTAAGTTTAATTACAGTAGTGGACAACCTGCACCTGAGTCCATCACCGACAAGATTTATGGAAACACTCTTTCTATCTCGGAAATGAAGATAGCAGACATCGCTGATGTTGACTTATCTTCTGTTGGAGTTATAAACTATGGAAACTTCACTGTTGAAGTTATTGATCCAGTTACTGACTATTTGGAACTAATGGAGAATGTATTTGATTTCGAGCTTATCAAAAATCTTCTGAAGTTAGACTTCAGGTTTCTATTTGACGCCATGCATGCTGTTACTGGTGCTTATGCAAAACCCATCTTTGTGGATAAACTGGGAGCCACTCCGGATTCAATTTCAAATGGAGTGCCTCTAGAGGATTTTGGGCATGGTCATCCAGATCCTAATCTCACGTATGCTAAGGATCTCGTCGATGTTTTGTACAGTAAAAATGGACCCGACTTTGGAGCCGCAAGTGATGGGGATGGTGATAGAAACATGATTCTTGGTAAAGGCTTTTTTGTTACTCCTTCAGACTCTGTTGCAATTATCGCAGCCAATGCTCAAGAAGCTATTCCATATTTTCAGAGTGGCCCCAAGGGATTAGCACGGTCCATGCCAACAAGCGGTGCACTTGATCATGTTGCTGAAAAGTTAAAGCTTCCTTTCTTTGAGGTTCCCACTGGTTGGAAGTTCTTTGGGAATCTTATGGATGCTGGGAAGTTATCTATATGTGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATCCGCGAGAAGGATGGCATATGGGCTGTCTTAGCTTGGCTTTCTATCATTGCATATCGGAACAAAGACAAAAAACCTGGCGAGAAGTTGGTCTCTGTTGCAGACGTTGTGAAGGAACACTGGGCAACCTATGGAAGAAATTTCTTTTCTCGATATGACTATGAAGAATGTGCGTCTGAAGGTGCCAATAAGATGATAAATCATCTTAGAGAATTAATCTCTAGGAGCAAGCCTGGTGAAAAGTTTGGAAATTATGCTCTCAAATTTGCCGATGACTTCACCTATACTGATCCTGTTGACGGAAGTGTGGCATCAAAGCAAGGTGTTCGGTTTGTTTTTACTGATGGATCGAGGATCATATATCGTTTATCAGTAATAAGCTTTTCTTCATTCTATAATTCTTTTTATTTTAAGAAGCTCTTCTTCTGCAGAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0004614 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0005982 GO:0005996 GO:0006006 GO:0006012 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009250 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009581 GO:0009582 GO:0009590 GO:0009605 GO:0009628 GO:0009629 GO:0009941 GO:0009987 GO:0010319 GO:0015980 GO:0016051 GO:0016052 GO:0016853 GO:0016866 GO:0016868 GO:0019252 GO:0019318 GO:0019320 GO:0019388 GO:0031967 GO:0031975 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046365 GO:0048046 GO:0050896 GO:0051606 GO:0055114 GO:0071704 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00030 ko00052 ko00230 ko00500 ko00520 ko00521 ko01100 ko01110 ko01120 ko01130 map00010 map00030 map00052 map00230 map00500 map00520 map00521 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

PGM_PMM_I PGM_PMM_II PGM_PMM_III PGM_PMM_IV

Protein Analysis

590

Amino Acids

64.64

Weight (kDa)

6.91

Isoelectric Point (pI)

26.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PGM_PMM_I	PF02878	84 - 223	5.2e-33	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II	PF02879	256 - 358	6.7e-12	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III	PF02880	367 - 470	6.2e-22	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM1_C_vert_fung	PF24947	491 - 569	1e-26	Phosphoglucomutase-1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51820
fragaria_vesca	FvH4_7g28680 FvH4_7g28680
malus_domestica	MD00G1003800.v1.1 MD01G1192300.v1.1
prunus_persica	Prupe.2G286900_v2.0.a1
pyrus_communis	pycom01g20350 pycom07g23920
rosa_chinensis	RchiOBHm_Chr1g0376171
rosa_laevigata	RLG00000026623
rosa_multiflora	Rmu_ssc0000116.1_g000052
rosa_roxburghii	Rroxscaffold_4G00282330
rosa_rugosa	Rorug01G0394200
rosa_samantha	Rh1AG405800 Rh1BG369500 Rh1CG382200 Rh1DG399100
rosa_wichuraiana	Rw1G036000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	542, 722
AarI	CACCTGC	1 cut(s)	502
Acc36I	ACCTGC	2 cut(s)	502, 625
AccB1I	GGYRCC	1 cut(s)	1517
AccB7I	CCANNNNNTGG	1 cut(s)	1254
AccII	CGCG	1 cut(s)	1341
AccIII	TCCGGA	1 cut(s)	913
AciI	CCGC	7 cut(s)	174, 267, 438, 514, 1038, 1194, 1339
AclWI	GGATC	8 cut(s)	316, 329, 749, 962, 999, 1619, 1690, 1697
AcsI	RAATTY	4 cut(s)	459, 480, 1474, 1598
AcuI	CTGAAG	4 cut(s)	817, 842, 1083, 1533
AcyI	GRCGYC	1 cut(s)	849
AfaI	GTAC	1 cut(s)	1010
AfiI	CCNNNNNNNGG	7 cut(s)	245, 280, 1031, 1193, 1254, 1345, 1634
AgsI	TTSAA	3 cut(s)	746, 921, 927
AjnI	CCWGG	4 cut(s)	324, 562, 1411, 1567
AjuI	GAANNNNNNNTTGG	2 cut(s)	1299, 1331
AluBI	AGCT	7 cut(s)	413, 805, 1139, 1228, 1370, 1716, 1753
AluI	AGCT	7 cut(s)	413, 805, 1139, 1228, 1370, 1716, 1753
Alw21I	GWGCWC	1 cut(s)	1201
Alw26I	GTCTC	2 cut(s)	275, 1432
Alw44I	GTGCAC	1 cut(s)	1197
AlwI	GGATC	8 cut(s)	316, 329, 749, 962, 999, 1619, 1690, 1697
AlwNI	CAGNNNCTG	3 cut(s)	764, 1106, 1328
Aor13HI	TCCGGA	1 cut(s)	913
AoxI	GGCC	3 cut(s)	247, 525, 1159
ApaLI	GTGCAC	1 cut(s)	1197
ApeKI	GCWGC	2 cut(s)	413, 1121
ApoI	RAATTY	4 cut(s)	459, 480, 1474, 1598
AseI	ATTAAT	2 cut(s)	219, 1550
Asp700I	GAANNNNTTC	3 cut(s)	1140, 1324, 1754
AspS9I	GGNCC	4 cut(s)	569, 1022, 1160, 1179
AsuHPI	GGTGA	6 cut(s)	295, 398, 625, 1067, 1583, 1606
AvaII	GGWCC	3 cut(s)	569, 1022, 1179
BaeGI	GKGCMC	1 cut(s)	1201
BamHI	GGATCC	1 cut(s)	321
BanI	GGYRCC	1 cut(s)	1517
BanII	GRGCYC	1 cut(s)	204
BbsI	GAAGAC	1 cut(s)	260
Bbv12I	GWGCWC	1 cut(s)	1201
BbvI	GCAGC	2 cut(s)	400, 1133
BcgI	CGANNNNNNTGC	2 cut(s)	1643, 1677
BciT130I	CCWGG	4 cut(s)	326, 564, 1413, 1569
BclI	TGATCA	1 cut(s)	1204
BcoDI	GTCTC	2 cut(s)	275, 1432
BfaI	CTAG	2 cut(s)	941, 1557
BfmI	CTRYAG	1 cut(s)	1762
BfuAI	ACCTGC	2 cut(s)	502, 625
BisI	GCNGC	5 cut(s)	174, 414, 438, 1038, 1122
BlsI	GCNGC	5 cut(s)	175, 415, 439, 1039, 1123
Bme1390I	CCNGG	4 cut(s)	326, 564, 1413, 1569
Bme18I	GGWCC	3 cut(s)	569, 1022, 1179
BmgT120I	GGNCC	4 cut(s)	569, 1022, 1160, 1179
BmiI	GGNNCC	9 cut(s)	228, 262, 323, 907, 1024, 1036, 1162, 1245, 1519
BmrFI	CCNGG	4 cut(s)	326, 564, 1413, 1569
BmrI	ACTGGG	2 cut(s)	911, 1465
BmsI	GCATC	3 cut(s)	219, 1270, 1655
BmuI	ACTGGG	2 cut(s)	911, 1465
BpiI	GAAGAC	1 cut(s)	260
BpmI	CTGGAG	1 cut(s)	168
Bpu10I	CCTNAGC	1 cut(s)	987
BpuEI	CTTGAG	1 cut(s)	1116
BsaAI	YACGTR	1 cut(s)	981
BsaBI	GATNNNNATC	2 cut(s)	425, 972
BsaHI	GRCGYC	1 cut(s)	849
BsaI	GGTCTC	2 cut(s)	275, 1432
BsaJI	CCNNGG	2 cut(s)	204, 1164
BsaWI	WCCGGW	2 cut(s)	257, 913
BsaXI	ACNNNNNCTCC	2 cut(s)	61, 91
Bsc4I	CCNNNNNNNGG	7 cut(s)	245, 280, 1031, 1193, 1254, 1345, 1634
Bse1I	ACTGG	6 cut(s)	378, 758, 871, 906, 1255, 1460
Bse3DI	GCAATG	2 cut(s)	341, 1383
Bse8I	GATNNNNATC	2 cut(s)	425, 972
BseAI	TCCGGA	1 cut(s)	913
BseBI	CCWGG	4 cut(s)	326, 564, 1413, 1569
BseDI	CCNNGG	2 cut(s)	204, 1164
BseGI	GGATG	6 cut(s)	370, 961, 1057, 1285, 1335, 1354
BseJI	GATNNNNATC	2 cut(s)	425, 972
BseLI	CCNNNNNNNGG	7 cut(s)	245, 280, 1031, 1193, 1254, 1345, 1634
BseMI	GCAATG	2 cut(s)	341, 1383
BseMII	CTCAG	3 cut(s)	28, 157, 615
BseNI	ACTGG	6 cut(s)	378, 758, 871, 906, 1255, 1460
BseRI	GAGGAG	5 cut(s)	69, 97, 100, 103, 106
BseSI	GKGCMC	1 cut(s)	1201
BseXI	GCAGC	2 cut(s)	400, 1133
BseYI	CCCAGC	1 cut(s)	1283
BsgI	GTGCAG	2 cut(s)	399, 603
Bsh1236I	CGCG	1 cut(s)	1341
Bsh1285I	CGRYCG	1 cut(s)	243
BshFI	GGCC	3 cut(s)	249, 527, 1161
BshNI	GGYRCC	1 cut(s)	1517
BsiEI	CGRYCG	1 cut(s)	243
BsiHKAI	GWGCWC	1 cut(s)	1201
BsiSI	CCGG	2 cut(s)	258, 914
BslI	CCNNNNNNNGG	7 cut(s)	245, 280, 1031, 1193, 1254, 1345, 1634
BsmAI	GTCTC	2 cut(s)	275, 1432
BsnI	GGCC	3 cut(s)	249, 527, 1161
Bso31I	GGTCTC	2 cut(s)	275, 1432
Bsp1286I	GDGCHC	2 cut(s)	204, 1201
Bsp13I	TCCGGA	1 cut(s)	913
Bsp1407I	TGTACA	1 cut(s)	1008
Bsp143I	GATC	9 cut(s)	240, 321, 754, 967, 991, 1204, 1624, 1682, 1689
BspACI	CCGC	7 cut(s)	174, 267, 438, 514, 1038, 1194, 1339
BspANI	GGCC	3 cut(s)	249, 527, 1161
BspCNI	CTCAG	3 cut(s)	27, 156, 616
BspEI	TCCGGA	1 cut(s)	913
BspFNI	CGCG	1 cut(s)	1341
BspLI	GGNNCC	9 cut(s)	228, 262, 323, 907, 1024, 1036, 1162, 1245, 1519
BspMAI	CTGCAG	1 cut(s)	1766
BspMI	ACCTGC	2 cut(s)	502, 625
BspPI	GGATC	8 cut(s)	316, 329, 749, 962, 999, 1619, 1690, 1697
BspQI	GCTCTTC	1 cut(s)	1760
BspT107I	GGYRCC	1 cut(s)	1517
BspTNI	GGTCTC	2 cut(s)	275, 1432
BsrDI	GCAATG	2 cut(s)	341, 1383
BsrGI	TGTACA	1 cut(s)	1008
BsrI	ACTGG	6 cut(s)	378, 758, 871, 906, 1255, 1460
BssECI	CCNNGG	2 cut(s)	204, 1164
BssMI	GATC	9 cut(s)	240, 321, 754, 967, 991, 1204, 1624, 1682, 1689
BssNI	GRCGYC	1 cut(s)	849
BssT1I	CCWWGG	2 cut(s)	204, 1164
Bst2UI	CCWGG	4 cut(s)	326, 564, 1413, 1569
Bst4CI	ACNGT	5 cut(s)	193, 605, 742, 1013, 1179
Bst6I	CTCTTC	4 cut(s)	107, 184, 1302, 1760
BstACI	GRCGYC	1 cut(s)	849
BstAPI	GCANNNNNTGC	1 cut(s)	1127
BstAUI	TGTACA	1 cut(s)	1008
BstBAI	YACGTR	1 cut(s)	981
BstC8I	GCNNGC	3 cut(s)	553, 858, 1565
BstDEI	CTNAG	6 cut(s)	14, 143, 624, 987, 1366, 1541
BstF5I	GGATG	6 cut(s)	370, 961, 1057, 1285, 1335, 1354
BstFNI	CGCG	1 cut(s)	1341
BstKTI	GATC	9 cut(s)	243, 324, 757, 970, 994, 1207, 1627, 1685, 1692
BstMAI	GTCTC	2 cut(s)	275, 1432
BstMBI	GATC	9 cut(s)	240, 321, 754, 967, 991, 1204, 1624, 1682, 1689
BstMCI	CGRYCG	1 cut(s)	243
BstMWI	GCNNNNNNNGC	8 cut(s)	194, 503, 689, 857, 1118, 1127, 1136, 1367
BstNI	CCWGG	4 cut(s)	326, 564, 1413, 1569
BstNSI	RCATGY	1 cut(s)	860
BstSCI	CCNGG	4 cut(s)	324, 562, 1411, 1567
BstSFI	CTRYAG	1 cut(s)	1762
BstSLI	GKGCMC	1 cut(s)	1201
BstUI	CGCG	1 cut(s)	1341
BstV1I	GCAGC	2 cut(s)	400, 1133
BstV2I	GAAGAC	1 cut(s)	260
BstX2I	RGATCY	3 cut(s)	321, 967, 991
BstXI	CCANNNNNNTGG	2 cut(s)	563, 892
BstYI	RGATCY	3 cut(s)	321, 967, 991
BsuRI	GGCC	3 cut(s)	249, 527, 1161
BtgZI	GCGATG	1 cut(s)	673
BtsCI	GGATG	6 cut(s)	370, 961, 1057, 1285, 1335, 1354
BtsIMutI	CAGTG	3 cut(s)	738, 1248, 1453
BveI	ACCTGC	2 cut(s)	502, 625
Cac8I	GCNNGC	3 cut(s)	553, 858, 1565
CaiI	CAGNNNCTG	3 cut(s)	764, 1106, 1328
Cfr13I	GGNCC	4 cut(s)	569, 1022, 1160, 1179
CseI	GACGC	2 cut(s)	857, 1497
Csp6I	GTAC	1 cut(s)	1009
CspCI	CAANNNNNGTGG	2 cut(s)	547, 582
CviAII	CATG	7 cut(s)	299, 853, 857, 956, 1066, 1183, 1208
CviQI	GTAC	1 cut(s)	1009
DdeI	CTNAG	6 cut(s)	14, 143, 624, 987, 1366, 1541
DpnI	GATC	9 cut(s)	242, 323, 756, 969, 993, 1206, 1626, 1684, 1691
DpnII	GATC	9 cut(s)	240, 321, 754, 967, 991, 1204, 1624, 1682, 1689
Eam1104I	CTCTTC	4 cut(s)	107, 184, 1302, 1760
EarI	CTCTTC	4 cut(s)	107, 184, 1302, 1760
Eco130I	CCWWGG	2 cut(s)	204, 1164
Eco24I	GRGCYC	1 cut(s)	204
Eco31I	GGTCTC	2 cut(s)	275, 1432
Eco47I	GGWCC	3 cut(s)	569, 1022, 1179
Eco57I	CTGAAG	4 cut(s)	817, 842, 1083, 1533
EcoRII	CCWGG	4 cut(s)	324, 562, 1411, 1567
EcoT14I	CCWWGG	2 cut(s)	204, 1164
EcoT22I	ATGCAT	1 cut(s)	858
EcoT38I	GRGCYC	1 cut(s)	204
ErhI	CCWWGG	2 cut(s)	204, 1164
FaeI	CATG	7 cut(s)	302, 856, 860, 959, 1069, 1186, 1211
FalI	AAGNNNNNCTT	7 cut(s)	815, 847, 1705, 1737, 1739, 1771, 1742
FatI	CATG	7 cut(s)	298, 852, 856, 955, 1065, 1182, 1207
FauNDI	CATATG	1 cut(s)	1355
FbaI	TGATCA	1 cut(s)	1204
Fnu4HI	GCNGC	5 cut(s)	174, 414, 438, 1038, 1122
FokI	GGATG	6 cut(s)	377, 948, 1064, 1292, 1322, 1361
FriOI	GRGCYC	1 cut(s)	204
Fsp4HI	GCNGC	5 cut(s)	174, 414, 438, 1038, 1122
FspBI	CTAG	2 cut(s)	941, 1557
GluI	GCNGC	5 cut(s)	174, 414, 438, 1038, 1122
GsaI	CCCAGC	1 cut(s)	1287
GsuI	CTGGAG	1 cut(s)	168
HaeIII	GGCC	3 cut(s)	249, 527, 1161
HapII	CCGG	2 cut(s)	258, 914
HgaI	GACGC	2 cut(s)	857, 1497
Hin1I	GRCGYC	1 cut(s)	849
Hin1II	CATG	7 cut(s)	302, 856, 860, 959, 1069, 1186, 1211
HincII	GTYRAC	3 cut(s)	489, 700, 1633
HindII	GTYRAC	3 cut(s)	489, 700, 1633
HindIII	AAGCTT	2 cut(s)	1226, 1714
HinfI	GANTC	7 cut(s)	48, 338, 626, 917, 1069, 1103, 1270
HpaII	CCGG	2 cut(s)	258, 914
HphI	GGTGA	6 cut(s)	295, 398, 625, 1067, 1583, 1606
Hpy166II	GTNNAC	7 cut(s)	371, 489, 569, 611, 700, 1199, 1633
Hpy188III	TCNNGA	8 cut(s)	45, 214, 407, 914, 941, 965, 1133, 1485
Hpy8I	GTNNAC	7 cut(s)	371, 489, 569, 611, 700, 1199, 1633
Hpy99I	CGWCG	1 cut(s)	1001
HpyAV	CCTTC	9 cut(s)	38, 239, 274, 470, 517, 1107, 1339, 1441, 1508
HpyCH4III	ACNGT	5 cut(s)	193, 605, 742, 1013, 1179
HpyCH4IV	ACGT	2 cut(s)	980, 1440
HpyF10VI	GCNNNNNNNGC	8 cut(s)	194, 503, 689, 857, 1118, 1127, 1136, 1367
HpyF3I	CTNAG	6 cut(s)	14, 143, 624, 987, 1366, 1541
HpySE526I	ACGT	2 cut(s)	980, 1440
Hsp92I	GRCGYC	1 cut(s)	849
Hsp92II	CATG	7 cut(s)	302, 856, 860, 959, 1069, 1186, 1211
Kpn2I	TCCGGA	1 cut(s)	913
Ksp22I	TGATCA	1 cut(s)	1204
Kzo9I	GATC	9 cut(s)	240, 321, 754, 967, 991, 1204, 1624, 1682, 1689
LguI	GCTCTTC	1 cut(s)	1760
LmnI	GCTCC	3 cut(s)	905, 1034, 1560
Lsp1109I	GCAGC	2 cut(s)	400, 1133
LweI	GCATC	3 cut(s)	219, 1270, 1655
MaeI	CTAG	2 cut(s)	941, 1557
MaeII	ACGT	2 cut(s)	980, 1440
MaeIII	GTNAC	4 cut(s)	395, 760, 862, 1090
MalI	GATC	9 cut(s)	242, 323, 756, 969, 993, 1206, 1626, 1684, 1691
MboI	GATC	9 cut(s)	240, 321, 754, 967, 991, 1204, 1624, 1682, 1689
MfeI	CAATTG	1 cut(s)	316
MflI	RGATCY	3 cut(s)	321, 967, 991
MhlI	GDGCHC	2 cut(s)	204, 1201
MlyI	GAGTC	3 cut(s)	42, 635, 1097
MmeI	TCCRAC	2 cut(s)	694, 1235
Mph1103I	ATGCAT	1 cut(s)	858
MroI	TCCGGA	1 cut(s)	913
MroXI	GAANNNNTTC	3 cut(s)	1140, 1324, 1754
MseI	TTAA	7 cut(s)	219, 402, 591, 597, 1223, 1550, 1746
MslI	CAYNNNNRTG	1 cut(s)	890
MspA1I	CMGCKG	1 cut(s)	267
MspI	CCGG	2 cut(s)	258, 914
MspR9I	CCNGG	4 cut(s)	326, 564, 1413, 1569
MunI	CAATTG	1 cut(s)	316
MvaI	CCWGG	4 cut(s)	326, 564, 1413, 1569
MvnI	CGCG	1 cut(s)	1341
MwoI	GCNNNNNNNGC	8 cut(s)	194, 503, 689, 857, 1118, 1127, 1136, 1367
NdeI	CATATG	1 cut(s)	1355
NdeII	GATC	9 cut(s)	240, 321, 754, 967, 991, 1204, 1624, 1682, 1689
NlaIII	CATG	7 cut(s)	302, 856, 860, 959, 1069, 1186, 1211
NlaIV	GGNNCC	9 cut(s)	228, 262, 323, 907, 1024, 1036, 1162, 1245, 1519
NsiI	ATGCAT	1 cut(s)	858
NspI	RCATGY	1 cut(s)	860
PaeI	GCATGC	1 cut(s)	860
PaqCI	CACCTGC	1 cut(s)	502
PciSI	GCTCTTC	1 cut(s)	1760
PdmI	GAANNNNTTC	3 cut(s)	1140, 1324, 1754
PfeI	GAWTC	4 cut(s)	338, 917, 1069, 1270
PflMI	CCANNNNNTGG	1 cut(s)	1254
PkrI	GCNGC	5 cut(s)	175, 415, 439, 1039, 1123
Ple19I	CGATCG	1 cut(s)	243
PleI	GAGTC	3 cut(s)	42, 634, 1097
PpsI	GAGTC	3 cut(s)	42, 634, 1097
Ppu21I	YACGTR	1 cut(s)	981
PshBI	ATTAAT	2 cut(s)	219, 1550
PsiI	TTATAA	2 cut(s)	542, 722
Psp6I	CCWGG	4 cut(s)	324, 562, 1411, 1567
PspFI	CCCAGC	1 cut(s)	1283
PspGI	CCWGG	4 cut(s)	324, 562, 1411, 1567
PspN4I	GGNNCC	9 cut(s)	228, 262, 323, 907, 1024, 1036, 1162, 1245, 1519
PspPI	GGNCC	4 cut(s)	569, 1022, 1160, 1179
PstI	CTGCAG	1 cut(s)	1766
PstNI	CAGNNNCTG	3 cut(s)	764, 1106, 1328
PsuI	RGATCY	3 cut(s)	321, 967, 991
PvuI	CGATCG	1 cut(s)	243
RsaI	GTAC	1 cut(s)	1010
RsaNI	GTAC	1 cut(s)	1009
RseI	CAYNNNNRTG	1 cut(s)	890
SapI	GCTCTTC	1 cut(s)	1760
SaqAI	TTAA	7 cut(s)	219, 402, 591, 597, 1223, 1550, 1746
SatI	GCNGC	5 cut(s)	174, 414, 438, 1038, 1122
Sau3AI	GATC	9 cut(s)	240, 321, 754, 967, 991, 1204, 1624, 1682, 1689
Sau96I	GGNCC	4 cut(s)	569, 1022, 1160, 1179
SchI	GAGTC	3 cut(s)	42, 635, 1097
ScrFI	CCNGG	4 cut(s)	326, 564, 1413, 1569
SduI	GDGCHC	2 cut(s)	204, 1201
SfaNI	GCATC	3 cut(s)	219, 1270, 1655
SfcI	CTRYAG	1 cut(s)	1762
SinI	GGWCC	3 cut(s)	569, 1022, 1179
SmiMI	CAYNNNNRTG	1 cut(s)	890
SmlI	CTYRAG	1 cut(s)	1131
SmoI	CTYRAG	1 cut(s)	1131
SphI	GCATGC	1 cut(s)	860
SsiI	CCGC	7 cut(s)	174, 267, 438, 514, 1038, 1194, 1339
SspMI	CTAG	2 cut(s)	941, 1557
StyD4I	CCNGG	4 cut(s)	324, 562, 1411, 1567
StyI	CCWWGG	2 cut(s)	204, 1164
TaaI	ACNGT	5 cut(s)	193, 605, 742, 1013, 1179
TaiI	ACGT	2 cut(s)	983, 1443
TaqI	TCGA	5 cut(s)	243, 801, 999, 1486, 1685
TatI	WGTACW	1 cut(s)	1008
TauI	GCSGC	3 cut(s)	176, 440, 1040
TfiI	GAWTC	4 cut(s)	338, 917, 1069, 1270
Tru1I	TTAA	7 cut(s)	219, 402, 591, 597, 1223, 1550, 1746
Tru9I	TTAA	7 cut(s)	219, 402, 591, 597, 1223, 1550, 1746
TscAI	CASTG	3 cut(s)	745, 1255, 1460
TseI	GCWGC	2 cut(s)	413, 1121
TspDTI	ATGAA	5 cut(s)	48, 330, 689, 1512, 1713
TspGWI	ACGGA	1 cut(s)	1650
TspRI	CASTG	3 cut(s)	745, 1255, 1460
Van91I	CCANNNNNTGG	1 cut(s)	1254
VneI	GTGCAC	1 cut(s)	1197
VpaK11BI	GGWCC	3 cut(s)	569, 1022, 1179
VspI	ATTAAT	2 cut(s)	219, 1550
XapI	RAATTY	4 cut(s)	459, 480, 1474, 1598
XbaI	TCTAGA	1 cut(s)	940
XceI	RCATGY	1 cut(s)	860
XcmI	CCANNNNNNNNNTGG	1 cut(s)	563
XmnI	GAANNNNTTC	3 cut(s)	1140, 1324, 1754
XspI	CTAG	2 cut(s)	941, 1557
Zsp2I	ATGCAT	1 cut(s)	858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.