MD00G1076200.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0016933
Physical Location & Seq
Reverse (-)
15346946 .. 15348748
1803 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1076200.v1.1.491

Sequence Viewer

Length: 1803 bp
ATGTCACTTCGAATCCTCGCACCAAAACCAAAACTAAAACGGCCGTCTCTGTTAGAAATTTGCAACGGAGACCTCGACCCCAGACAGTTCTACCAACTCCTCTCCCACGCCGTTACTTCCGGCGTCTTCGCCACCGACTCCGTCGTCTCCAGCAGGCTCCTCCTCCGCTCCCTCTCCCGCCGCCACCTCGAATTTTCCCGCGCCATCTTCTCCCAGATTCAAAACCCAAATATCTTCGCCTGCAACTTCATCTTCAAGGCCTTCTCCCACAGCTCCTCCCCGCAAGAAGCGGTCTTTCACTACAATCTCGTGCGACGTCGTTTTCCCCATGTGCTGCCGGATAACTACTCCTTCCCTTTCCTCTTCAAAGCATGCGGTCGTCTCAGTCTTCCCCACAAAGGCCAAGAGCTTCACTGTTTGGCCATGGCGCTAGGGCTCGAAACCGACGTCTTCGTTCAAAACGGCCTCGTTTCGATGTACTCCGCGTGTGGAATGCTTCACTGTGCCCGTAAAGTCTTCGACTTGCTTCCTGTTTCGGTTCGCGACGTGGTGTCTTGGAACAGCATTGTTTCTGGGTATGTCCAAAGCAATCGGAACTGGGACGCACTCCAGATGTTCGACGAAATGCTTGCATTTACAAGGCCCGATAATGTGACGTTGGTCAGTGCTCTCACTGCTTGTGGGAAGATGCGTTGTCTTCATTTGGGGAGGCAAATTCATGGGTTAGTGTTGGCAAGTGGGTTTGCTTTGGACGTCTTCTTGGGTTCGTCTTTGATTGACATGTATGCGAAATGTGGGCGCATGGATGATGCTCGAAAGGTTTTCGATAGAATTAGGAACAAAAATGTGGTGTGTTGGACTTCTATGATCGCTGGTTATACTCAGTCACGTTTGTTCAAGGATGCGATTGAATTGTTTAGGGAAATGCAATTAGATGGAGTTGAAGCAGACGCAGTAATGGTTGCTTGTGTGATATCAGCGTGCGGGCGTTCGGGTGCATTAGGCCATGGAAGATGGGTGCATACATACTGCGAAAGAATCGGCTTTTACACCAACATCTCCGTGAAGAATGCCTTGATTGACATGTATTCAAAGTGCGGAGACATTAAACGGGCTCTTGAAATTTTCCATGACATGAGCAACAGAGATGTATTTACATGGACTGCCATGATAACTGGTCTTGCTATGAACGGGGACTCTGTCGGAGCACTGGAAGTGTTTTCACAAATGGAAGCGAGTGATGTCAGGCCGAACGAGGTCTCATTCCTCGGCATCTTGTCAGCATGCGGTCATGGCGGGTTTGTGGATAAAGGTTTTCATTATTTCAGAGCCATGGCTGGAATATATAACCTCACTCCTCGCATTGAACACTACGGATGCATGGTGGATCTTCTTGGTCGAGCTAATCTGTTAAATGAAGCAGAGAAGTTCATCGGAGCTATGCCAATCCAACCTGATGTGGTTATATGGCGATCTCTGCTTTTTGCATGTAGGACTTATGGAAACATAGAATTGGCAGAGTTTGTAGCCAAAAAGATCGAGGAATTAGAACCAAGAAAGTTTGAGTCTCGCGTTTTGTTATCGAATCTATATGCTTCGGCATCAAGGTGGCATGAAGTGAGCACGATGAGGAAGGCTACGCCTCTTCAGGGTGCCCAGAAGCAGCCGGGTTGCTCTCTTATAGAAGTAGACGGTCTTGTTCATGAATTCATTGTCGCAGATTGTTCACATTGTCAAATTGATTCGATATACGAGACGCTTAGAGGAATGAACAAAGTCATACGATCAGAAAGATTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04110 ko04114 ko04914 ko05100 ko05131 map04110 map04114 map04914 map05100 map05131
Pfam Domains
Protein Families
HORMA PPR PPR_2

Protein Analysis

601

Amino Acids

67.42

Weight (kDa)

8.41

Isoelectric Point (pI)

51.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 181 - 228 4.5e-06 PPR repeat family
PPR_2 PF13041 281 - 328 4.8e-08 PPR repeat family
PPR PF01535 284 - 314 2e-07 PPR repeat
PPR_2 PF13041 382 - 430 8.1e-09 PPR repeat family
PPR_3 PF13812 383 - 430 1.8e-06 Pentatricopeptide repeat domain
E_motif PF20431 500 - 562 6.4e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016933)

Species Orthologous Gene IDs
malus_domestica MD00G1076200.v1.1 MD14G1144800.v1.1
prunus_persica Prupe.5G139200_v2.0.a1
pyrus_communis pycom06g11950 pycom14g12030
rosa_chinensis RchiOBHm_Chr7g0188361
rosa_laevigata RLG00000004699 RLG00000004705
rosa_multiflora Rmu_co8471191.1_g000001
rosa_roxburghii Rroxscaffold_3G00266450
rosa_rugosa Rorug06G0490100
rosa_samantha Rh7BG096300 Rh7CG096800
rosa_wichuraiana Rw7G008170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
AatII GACGTC 3 cut(s) 319, 450, 756
AccB1I GGYRCC 1 cut(s) 1652
AccBSI CCGCTC 1 cut(s) 168
AccI GTMKAC 1 cut(s) 1689
AccII CGCG 4 cut(s) 201, 485, 543, 1572
AclWI GGATC 1 cut(s) 1395
AcoI YGGCCR 2 cut(s) 41, 420
AcsI RAATTY 5 cut(s) 57, 191, 714, 1122, 1706
AcuI CTGAAG 1 cut(s) 1631
AcyI GRCGYC 4 cut(s) 123, 316, 447, 753
AfaI GTAC 1 cut(s) 479
AfiI CCNNNNNNNGG 2 cut(s) 398, 1649
AflIII ACRYGT 2 cut(s) 780, 1083
AhdI GACNNNNNGTC 1 cut(s) 550
AjiI CACGTC 1 cut(s) 547
AluBI AGCT 4 cut(s) 273, 409, 1403, 1439
AluI AGCT 4 cut(s) 273, 409, 1403, 1439
Alw21I GWGCWC 3 cut(s) 670, 1210, 1625
Alw26I GTCTC 8 cut(s) 51, 63, 151, 386, 1095, 1264, 1572, 1748
AlwI GGATC 1 cut(s) 1395
AoxI GGCC 8 cut(s) 41, 258, 400, 420, 463, 641, 1003, 1247
ApeKI GCWGC 2 cut(s) 334, 1663
ApoI RAATTY 5 cut(s) 57, 191, 714, 1122, 1706
ArsI GACNNNNNNTTYG 2 cut(s) 432, 464
AspLEI GCGC 3 cut(s) 203, 430, 801
AspS9I GGNCC 1 cut(s) 642
AsuC2I CCSGG 1 cut(s) 1668
AsuII TTCGAA 1 cut(s) 10
BaeGI GKGCMC 2 cut(s) 508, 1657
BalI TGGCCA 1 cut(s) 422
BanI GGYRCC 1 cut(s) 1652
BanII GRGCYC 2 cut(s) 438, 1117
BauI CACGAG 1 cut(s) 308
BbsI GAAGAC 6 cut(s) 118, 380, 442, 508, 689, 748
Bbv12I GWGCWC 3 cut(s) 670, 1210, 1625
BbvI GCAGC 2 cut(s) 321, 1675
BccI CCATC 3 cut(s) 212, 929, 1008
BceAI ACGGC 4 cut(s) 28, 56, 95, 478
BcgI CGANNNNNNTGC 2 cut(s) 611, 645
BcnI CCSGG 1 cut(s) 1668
BcoDI GTCTC 8 cut(s) 51, 63, 151, 386, 1095, 1264, 1572, 1748
BfaI CTAG 1 cut(s) 431
BfoI RGCGCY 1 cut(s) 431
BisI GCNGC 3 cut(s) 181, 335, 1664
BlsI GCNGC 3 cut(s) 182, 336, 1665
Bme1390I CCNGG 1 cut(s) 1668
BmeRI GACNNNNNGTC 1 cut(s) 550
BmgBI CACGTC 1 cut(s) 547
BmgT120I GGNCC 1 cut(s) 642
BmiI GGNNCC 2 cut(s) 158, 1654
BmrFI CCNGG 1 cut(s) 1668
BmrI ACTGGG 1 cut(s) 607
BmsI GCATC 6 cut(s) 678, 799, 892, 1281, 1367, 1610
BmuI ACTGGG 1 cut(s) 607
BoxI GACNNNNGTC 1 cut(s) 659
BpiI GAAGAC 6 cut(s) 118, 380, 442, 508, 689, 748
BpmI CTGGAG 2 cut(s) 133, 593
Bpu14I TTCGAA 1 cut(s) 10
BpuMI CCSGG 1 cut(s) 1668
BsaHI GRCGYC 4 cut(s) 123, 316, 447, 753
BsaI GGTCTC 2 cut(s) 63, 1264
BsaJI CCNNGG 4 cut(s) 423, 1006, 1267, 1332
BsaXI ACNNNNNCTCC 2 cut(s) 260, 290
Bsc4I CCNNNNNNNGG 2 cut(s) 398, 1649
Bse1I ACTGG 3 cut(s) 602, 1180, 1215
BseDI CCNNGG 4 cut(s) 423, 1006, 1267, 1332
BseGI GGATG 3 cut(s) 811, 907, 1382
BseLI CCNNNNNNNGG 2 cut(s) 398, 1649
BseMII CTCAG 2 cut(s) 397, 896
BseNI ACTGG 3 cut(s) 602, 1180, 1215
BseRI GAGGAG 5 cut(s) 89, 149, 152, 265, 1347
BseSI GKGCMC 2 cut(s) 508, 1657
BseX3I CGGCCG 1 cut(s) 41
BseXI GCAGC 2 cut(s) 321, 1675
Bsh1236I CGCG 4 cut(s) 201, 485, 543, 1572
Bsh1285I CGRYCG 2 cut(s) 44, 379
BshFI GGCC 8 cut(s) 43, 260, 402, 422, 465, 643, 1005, 1249
BshNI GGYRCC 1 cut(s) 1652
BsiEI CGRYCG 2 cut(s) 44, 379
BsiHKAI GWGCWC 3 cut(s) 670, 1210, 1625
BsiSI CCGG 3 cut(s) 120, 338, 1667
BslFI GGGAC 2 cut(s) 614, 1208
BslI CCNNNNNNNGG 2 cut(s) 398, 1649
BsmAI GTCTC 8 cut(s) 51, 63, 151, 386, 1095, 1264, 1572, 1748
BsmBI CGTCTC 4 cut(s) 51, 151, 386, 1748
BsmFI GGGAC 2 cut(s) 614, 1208
BsmI GAATGC 2 cut(s) 498, 1075
BsnI GGCC 8 cut(s) 43, 260, 402, 422, 465, 643, 1005, 1249
Bso31I GGTCTC 2 cut(s) 63, 1264
Bsp119I TTCGAA 1 cut(s) 10
Bsp1286I GDGCHC 7 cut(s) 438, 508, 670, 1117, 1210, 1625, 1657
Bsp143I GATC 5 cut(s) 867, 1387, 1472, 1536, 1784
Bsp19I CCATGG 3 cut(s) 423, 1006, 1332
Bsp68I TCGCGA 1 cut(s) 543
BspANI GGCC 8 cut(s) 43, 260, 402, 422, 465, 643, 1005, 1249
BspCNI CTCAG 2 cut(s) 396, 895
BspFNI CGCG 4 cut(s) 201, 485, 543, 1572
BspHI TCATGA 1 cut(s) 1702
BspLI GGNNCC 2 cut(s) 158, 1654
BspPI GGATC 1 cut(s) 1395
BspT104I TTCGAA 1 cut(s) 10
BspT107I GGYRCC 1 cut(s) 1652
BspTNI GGTCTC 2 cut(s) 63, 1264
BsrBI CCGCTC 1 cut(s) 168
BsrI ACTGG 3 cut(s) 602, 1180, 1215
BssECI CCNNGG 4 cut(s) 423, 1006, 1267, 1332
BssMI GATC 5 cut(s) 867, 1387, 1472, 1536, 1784
BssNI GRCGYC 4 cut(s) 123, 316, 447, 753
BssSI CACGAG 1 cut(s) 308
BssT1I CCWWGG 3 cut(s) 423, 1006, 1332
Bst2BI CACGAG 1 cut(s) 308
Bst4CI ACNGT 4 cut(s) 87, 416, 503, 1694
Bst6I CTCTTC 2 cut(s) 368, 1650
BstACI GRCGYC 4 cut(s) 123, 316, 447, 753
BstBI TTCGAA 1 cut(s) 10
BstC8I GCNNGC 7 cut(s) 155, 241, 373, 630, 982, 986, 1285
BstDEI CTNAG 3 cut(s) 383, 882, 1760
BstDSI CCRYGG 3 cut(s) 423, 1006, 1332
BstF5I GGATG 3 cut(s) 811, 907, 1382
BstFNI CGCG 4 cut(s) 201, 485, 543, 1572
BstH2I RGCGCY 1 cut(s) 431
BstHHI GCGC 3 cut(s) 203, 430, 801
BstKTI GATC 5 cut(s) 870, 1390, 1475, 1539, 1787
BstMAI GTCTC 8 cut(s) 51, 63, 151, 386, 1095, 1264, 1572, 1748
BstMBI GATC 5 cut(s) 867, 1387, 1472, 1536, 1784
BstMCI CGRYCG 2 cut(s) 44, 379
BstMWI GCNNNNNNNGC 3 cut(s) 674, 1293, 1477
BstNSI RCATGY 5 cut(s) 375, 784, 1087, 1287, 1491
BstPAI GACNNNNGTC 1 cut(s) 659
BstSCI CCNGG 1 cut(s) 1666
BstSLI GKGCMC 2 cut(s) 508, 1657
BstUI CGCG 4 cut(s) 201, 485, 543, 1572
BstV1I GCAGC 2 cut(s) 321, 1675
BstV2I GAAGAC 6 cut(s) 118, 380, 442, 508, 689, 748
BstX2I RGATCY 1 cut(s) 1387
BstYI RGATCY 1 cut(s) 1387
BstZI CGGCCG 1 cut(s) 41
BsuRI GGCC 8 cut(s) 43, 260, 402, 422, 465, 643, 1005, 1249
BtgI CCRYGG 3 cut(s) 423, 1006, 1332
BtrI CACGTC 1 cut(s) 547
BtsCI GGATG 3 cut(s) 811, 907, 1382
BtsI GCAGTG 1 cut(s) 672
BtsIMutI CAGTG 5 cut(s) 412, 499, 670, 672, 1208
BtuMI TCGCGA 1 cut(s) 543
Cac8I GCNNGC 7 cut(s) 155, 241, 373, 630, 982, 986, 1285
CciI TCATGA 1 cut(s) 1702
CfoI GCGC 3 cut(s) 203, 430, 801
Cfr13I GGNCC 1 cut(s) 642
CseI GACGC 4 cut(s) 112, 611, 959, 1765
Csp6I GTAC 1 cut(s) 478
CviQI GTAC 1 cut(s) 478
DdeI CTNAG 3 cut(s) 383, 882, 1760
DpnI GATC 5 cut(s) 869, 1389, 1474, 1538, 1786
DpnII GATC 5 cut(s) 867, 1387, 1472, 1536, 1784
DrdI GACNNNNNNGTC 1 cut(s) 143
DriI GACNNNNNGTC 1 cut(s) 550
DseDI GACNNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 2 cut(s) 41, 420
EagI CGGCCG 1 cut(s) 41
Eam1104I CTCTTC 2 cut(s) 368, 1650
Eam1105I GACNNNNNGTC 1 cut(s) 550
EarI CTCTTC 2 cut(s) 368, 1650
EclXI CGGCCG 1 cut(s) 41
Eco130I CCWWGG 3 cut(s) 423, 1006, 1332
Eco147I AGGCCT 1 cut(s) 260
Eco24I GRGCYC 2 cut(s) 438, 1117
Eco31I GGTCTC 2 cut(s) 63, 1264
Eco32I GATATC 1 cut(s) 975
Eco52I CGGCCG 1 cut(s) 41
Eco57I CTGAAG 1 cut(s) 1631
EcoRI GAATTC 1 cut(s) 1706
EcoRV GATATC 1 cut(s) 975
EcoT14I CCWWGG 3 cut(s) 423, 1006, 1332
EcoT22I ATGCAT 1 cut(s) 1382
EcoT38I GRGCYC 2 cut(s) 438, 1117
ErhI CCWWGG 3 cut(s) 423, 1006, 1332
Esp3I CGTCTC 4 cut(s) 51, 151, 386, 1748
FalI AAGNNNNNCTT 2 cut(s) 1058, 1090
FaqI GGGAC 2 cut(s) 614, 1208
FauI CCCGC 5 cut(s) 185, 206, 288, 977, 1289
FblI GTMKAC 1 cut(s) 1689
Fnu4HI GCNGC 3 cut(s) 181, 335, 1664
FokI GGATG 3 cut(s) 818, 914, 1389
FriOI GRGCYC 2 cut(s) 438, 1117
Fsp4HI GCNGC 3 cut(s) 181, 335, 1664
FspBI CTAG 1 cut(s) 431
GlaI GCGC 3 cut(s) 202, 429, 800
GluI GCNGC 3 cut(s) 181, 335, 1664
GsuI CTGGAG 2 cut(s) 133, 593
HaeII RGCGCY 1 cut(s) 431
HaeIII GGCC 8 cut(s) 43, 260, 402, 422, 465, 643, 1005, 1249
HapII CCGG 3 cut(s) 120, 338, 1667
HgaI GACGC 4 cut(s) 112, 611, 959, 1765
HhaI GCGC 3 cut(s) 203, 430, 801
Hin1I GRCGYC 4 cut(s) 123, 316, 447, 753
Hin6I GCGC 3 cut(s) 201, 428, 799
HinP1I GCGC 3 cut(s) 201, 428, 799
HinfI GANTC 8 cut(s) 12, 137, 217, 1038, 1196, 1565, 1585, 1742
HpaII CCGG 3 cut(s) 120, 338, 1667
Hpy166II GTNNAC 2 cut(s) 1690, 1727
Hpy188I TCNGA 5 cut(s) 594, 1205, 1328, 1436, 1789
Hpy188III TCNNGA 4 cut(s) 542, 610, 1118, 1703
Hpy8I GTNNAC 2 cut(s) 1690, 1727
Hpy99I CGWCG 6 cut(s) 146, 318, 321, 449, 548, 623
HpyAV CCTTC 3 cut(s) 271, 361, 1627
HpyCH4III ACNGT 4 cut(s) 87, 416, 503, 1694
HpyCH4IV ACGT 6 cut(s) 316, 447, 546, 656, 753, 889
HpyCH4V TGCA 8 cut(s) 63, 243, 632, 928, 998, 1021, 1380, 1487
HpyF10VI GCNNNNNNNGC 3 cut(s) 674, 1293, 1477
HpyF3I CTNAG 3 cut(s) 383, 882, 1760
HpySE526I ACGT 6 cut(s) 316, 447, 546, 656, 753, 889
Hsp92I GRCGYC 4 cut(s) 123, 316, 447, 753
HspAI GCGC 3 cut(s) 201, 428, 799
Kzo9I GATC 5 cut(s) 867, 1387, 1472, 1536, 1784
LmnI GCTCC 5 cut(s) 162, 173, 278, 1205, 1436
Lsp1109I GCAGC 2 cut(s) 321, 1675
LweI GCATC 6 cut(s) 678, 799, 892, 1281, 1367, 1610
MaeI CTAG 1 cut(s) 431
MaeII ACGT 6 cut(s) 316, 447, 546, 656, 753, 889
MaeIII GTNAC 4 cut(s) 3, 112, 652, 885
MalI GATC 5 cut(s) 869, 1389, 1474, 1538, 1786
MbiI CCGCTC 1 cut(s) 168
MboI GATC 5 cut(s) 867, 1387, 1472, 1536, 1784
MflI RGATCY 1 cut(s) 1387
MhlI GDGCHC 7 cut(s) 438, 508, 670, 1117, 1210, 1625, 1657
MlsI TGGCCA 1 cut(s) 422
MluNI TGGCCA 1 cut(s) 422
MlyI GAGTC 3 cut(s) 131, 1190, 1574
MmeI TCCRAC 3 cut(s) 836, 1183, 1474
Mox20I TGGCCA 1 cut(s) 422
Mph1103I ATGCAT 1 cut(s) 1382
MscI TGGCCA 1 cut(s) 422
MseI TTAA 2 cut(s) 1107, 1412
MslI CAYNNNNRTG 2 cut(s) 1061, 1606
Msp20I TGGCCA 1 cut(s) 422
MspI CCGG 3 cut(s) 120, 338, 1667
MspR9I CCNGG 1 cut(s) 1668
Mva1269I GAATGC 2 cut(s) 498, 1075
MvnI CGCG 4 cut(s) 201, 485, 543, 1572
MwoI GCNNNNNNNGC 3 cut(s) 674, 1293, 1477
NciI CCSGG 1 cut(s) 1668
NcoI CCATGG 3 cut(s) 423, 1006, 1332
NdeII GATC 5 cut(s) 867, 1387, 1472, 1536, 1784
NlaIV GGNNCC 2 cut(s) 158, 1654
NmeAIII GCCGAG 1 cut(s) 1248
NmuCI GTSAC 3 cut(s) 3, 652, 885
NruI TCGCGA 1 cut(s) 543
NsiI ATGCAT 1 cut(s) 1382
NspI RCATGY 5 cut(s) 375, 784, 1087, 1287, 1491
NspV TTCGAA 1 cut(s) 10
PaeI GCATGC 2 cut(s) 375, 1287
PagI TCATGA 1 cut(s) 1702
PceI AGGCCT 1 cut(s) 260
PciI ACATGT 2 cut(s) 780, 1083
PcsI WCGNNNNNNNCGW 2 cut(s) 72, 444
PctI GAATGC 2 cut(s) 498, 1075
PfeI GAWTC 5 cut(s) 12, 217, 1038, 1585, 1742
PflFI GACNNNGTC 2 cut(s) 140, 1199
PkrI GCNGC 3 cut(s) 182, 336, 1665
PleI GAGTC 3 cut(s) 131, 1190, 1573
PpsI GAGTC 3 cut(s) 131, 1190, 1573
PscI ACATGT 2 cut(s) 780, 1083
PshAI GACNNNNGTC 1 cut(s) 659
PspN4I GGNNCC 2 cut(s) 158, 1654
PspPI GGNCC 1 cut(s) 642
PsuI RGATCY 1 cut(s) 1387
PsyI GACNNNGTC 2 cut(s) 140, 1199
RruI TCGCGA 1 cut(s) 543
RsaI GTAC 1 cut(s) 479
RsaNI GTAC 1 cut(s) 478
RseI CAYNNNNRTG 2 cut(s) 1061, 1606
SaqAI TTAA 2 cut(s) 1107, 1412
SatI GCNGC 3 cut(s) 181, 335, 1664
Sau3AI GATC 5 cut(s) 867, 1387, 1472, 1536, 1784
Sau96I GGNCC 1 cut(s) 642
SchI GAGTC 3 cut(s) 131, 1190, 1574
ScrFI CCNGG 1 cut(s) 1668
SduI GDGCHC 7 cut(s) 438, 508, 670, 1117, 1210, 1625, 1657
SfaNI GCATC 6 cut(s) 678, 799, 892, 1281, 1367, 1610
SfuI TTCGAA 1 cut(s) 10
SmiMI CAYNNNNRTG 2 cut(s) 1061, 1606
SphI GCATGC 2 cut(s) 375, 1287
SseBI AGGCCT 1 cut(s) 260
SspMI CTAG 1 cut(s) 431
StuI AGGCCT 1 cut(s) 260
StyD4I CCNGG 1 cut(s) 1666
StyI CCWWGG 3 cut(s) 423, 1006, 1332
TaaI ACNGT 4 cut(s) 87, 416, 503, 1694
TaiI ACGT 6 cut(s) 319, 450, 549, 659, 756, 892
TatI WGTACW 1 cut(s) 477
TauI GCSGC 1 cut(s) 183
TfiI GAWTC 5 cut(s) 12, 217, 1038, 1585, 1742
Tru1I TTAA 2 cut(s) 1107, 1412
Tru9I TTAA 2 cut(s) 1107, 1412
TscAI CASTG 5 cut(s) 419, 506, 670, 679, 1215
TseFI GTSAC 3 cut(s) 3, 652, 885
TseI GCWGC 2 cut(s) 334, 1663
Tsp45I GTSAC 3 cut(s) 3, 652, 885
TspGWI ACGGA 4 cut(s) 81, 130, 1051, 1389
TspRI CASTG 5 cut(s) 419, 506, 670, 679, 1215
Tth111I GACNNNGTC 2 cut(s) 140, 1199
XapI RAATTY 5 cut(s) 57, 191, 714, 1122, 1706
XceI RCATGY 5 cut(s) 375, 784, 1087, 1287, 1491
XmiI GTMKAC 1 cut(s) 1689
XspI CTAG 1 cut(s) 431
ZraI GACGTC 3 cut(s) 317, 448, 754
Zsp2I ATGCAT 1 cut(s) 1382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.