MD14G1144800.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0016933
Physical Location & Seq
Forward (+)
23798142 .. 23800065
1924 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1144800.v1.1.491

Sequence Viewer

Length: 1839 bp
ATGCACTTTGCTTGGATCGCCTTTATACAAAGTGGTATTGGTTTGTTTTTGTTTTACAAGGCTACTAGCGGCGGCCGACGAGCCTGCAATGCGGCAATGTCACTTCGAATCCTCACACCAAAACCCAAACGGCCGTCTCTGTTAGAAATATGCAGCGGAGATCTCAACCCCAAGCGGTTTTACCAACTCGTCTCCCACGCCGTTACTTCCGGCGTCTTCTCCACCGACTCCTTCGTCTCCAGCAAGCTCCTCCTCCTCTCCCTCTCCCACCGCCGCCTCGAATTTTCTCGCTCCCTCTTCTCCCAGATTCAAAACCCAAATCTCTTCGCCTGCAACTTCATCTTCAAAGACTTCTCGCTCAGCTCCTGCCCGCAAGAAGCGCTCTTTCAATACAATCTCGTGCGACGTCGTTACCCTCATTTGCTTCCCGACAACTACTCCTTCCCTTTCCTCTTCAAGGCATGCGGTCGTCTCAGTCTCCCCCACAAGGGCCAAGAGCTTCACGCTTTTACAGTCGCGCTCGGGCTCCAAACCGACGTCTTCGTCCAAAACGGCCTTGTTTCGATGTACTCCGAGTGCGGATTGCTTCACTCTGCTCGTAAAGTTTTCGACTTTCTTCCCGTTTCAGTTCGCGACGTGGTCTCTTGGAACAGCATTGTTTCTGGGTATGTGCAGAGCAATCGGAACCGGGATGCACTCCAGGTGTTTGAGGAAATGCTTGCATTTACGAGGCCCGATAATGTGACGTTGGTCAGCGCTTTCACTGCTTGTGGGAAGATGGGGTGTCTTCATTTGGGGTGGCAAATTCATGGGTTAGTGTTGGCAGGTGGGTTTGCATTGGATGTCTTCTTGGGTTCATCCTTGATCGACATGTATGCGAAATGTGGGCACATGGATGATGCTCGAAAGGTTTTTGAAAGAATTGAGCAGCGAAATGTAGTGTGTTGGACTTCTATGATCGCCGGTTATGCTCAGTCACGTTCCTTCAAGGAGGCCATTAAATTATTTAGGGGAATGCAATTAGATGGAGTTGAAGCAGACGCAGCAATGGTTGCTTGTGTAATATCTGCGTGCGGGCATTCGGGTGCTTTAGATCATGGAAGATGGGTGCATACATACTGCGAAAGAAGCGTCTTTTACACCAACATCTCAGTGAAGAATGCCTTGATTGACATGTATTCGAAGTGCGGAGACATTATACGGGCTCTTGGAATTTTCCATGACATGAGGACAAGAGATGTTTTTACATGGACTGCCATGATAACTGGTCTTGCTCTCAACGGGGACTCTGTTGGAGCACTGGAAATGTTTTCACAAATGGAAGCGTCGAGTGATGTGAGGCCGAACGAGGTCACATTCCTCGGCGTGTTGTCTGCATGCAGTCATGGCGGTCCTCGTATCGAACACTACGGATGCATGGTGGATCTTCTTGGTCGTGCTAATCTGTTAAACGAGGCTGAAAAGTTCATCAGAGATATGCCTATTCAACCTGATGTGGTTATATGGAGATCTCTGCTTTTCGCATGTAGGACTTATGGGGACATGGATTTGGGAGAGTTTGTTGCCAAAAGGATTGAGGAATTGGAACCAAGAAAGTTTGCATCGCGTGTTTTGTTGTCGAATCTATATGCTTCAGCATCAAGGTGGCATGATGTGAGCAGGATGAGGAAGGGTGTGGCTCTTCAGGGTGCCCGGAAGCAGCCGGATTGCTCTCTTATAGAAGTAGACGGTCTCGTTCAAGAATTCATTGTTGCAGATTGTTCGCATTGTCAAATTGATTCTATATACGAGACGGTTAGAGGAATGAACAAAGTCATACGATCAGAAAGATTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04110 ko04114 ko04914 ko05100 ko05131 map04110 map04114 map04914 map05100 map05131
Pfam Domains
Protein Families
HORMA PPR PPR_2

Protein Analysis

613

Amino Acids

68.63

Weight (kDa)

8.42

Isoelectric Point (pI)

50.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 211 - 258 3.2e-07 PPR repeat family
PPR_2 PF13041 311 - 355 7e-07 PPR repeat family
PPR PF01535 314 - 344 1.5e-06 PPR repeat
PPR_2 PF13041 412 - 461 2.8e-07 PPR repeat family
E_motif PF20431 512 - 574 7.3e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016933)

Species Orthologous Gene IDs
malus_domestica MD00G1076200.v1.1 MD14G1144800.v1.1
prunus_persica Prupe.5G139200_v2.0.a1
pyrus_communis pycom06g11950 pycom14g12030
rosa_chinensis RchiOBHm_Chr7g0188361
rosa_laevigata RLG00000004699 RLG00000004705
rosa_multiflora Rmu_co8471191.1_g000001
rosa_roxburghii Rroxscaffold_3G00266450
rosa_rugosa Rorug06G0490100
rosa_samantha Rh7BG096300 Rh7CG096800
rosa_wichuraiana Rw7G008170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 815
AasI GACNNNNNNGTC 2 cut(s) 233, 542
AatII GACGTC 2 cut(s) 409, 540
Acc36I ACCTGC 1 cut(s) 815
AccB1I GGYRCC 1 cut(s) 1688
AccI GTMKAC 1 cut(s) 1725
AccII CGCG 3 cut(s) 518, 633, 1606
AclWI GGATC 2 cut(s) 23, 1431
AcoI YGGCCR 2 cut(s) 73, 131
AcsI RAATTY 4 cut(s) 281, 804, 1212, 1742
AcuI CTGAAG 2 cut(s) 1617, 1667
AcyI GRCGYC 3 cut(s) 213, 406, 537
AfaI GTAC 1 cut(s) 569
AfeI AGCGCT 2 cut(s) 381, 757
AfiI CCNNNNNNNGG 3 cut(s) 457, 487, 488
AflIII ACRYGT 2 cut(s) 870, 1173
AgsI TTSAA 9 cut(s) 311, 346, 389, 457, 917, 988, 1034, 1487, 1739
AjiI CACGTC 1 cut(s) 637
AjnI CCWGG 1 cut(s) 699
AluBI AGCT 3 cut(s) 247, 363, 499
AluI AGCT 3 cut(s) 247, 363, 499
Alw21I GWGCWC 1 cut(s) 1300
Alw26I GTCTC 9 cut(s) 141, 196, 241, 476, 482, 646, 1185, 1736, 1784
AlwI GGATC 2 cut(s) 23, 1431
AlwNI CAGNNNCTG 1 cut(s) 366
Ama87I CYCGRG 1 cut(s) 521
Aor51HI AGCGCT 2 cut(s) 381, 757
AoxI GGCC 7 cut(s) 73, 131, 490, 553, 731, 993, 1340
ApeKI GCWGC 4 cut(s) 153, 928, 1043, 1699
ApoI RAATTY 4 cut(s) 281, 804, 1212, 1742
ArsI GACNNNNNNTTYG 2 cut(s) 1116, 1148
AspLEI GCGC 3 cut(s) 382, 520, 758
AspS9I GGNCC 3 cut(s) 490, 732, 1391
AsuC2I CCSGG 2 cut(s) 689, 1693
AsuII TTCGAA 2 cut(s) 106, 1181
AvaI CYCGRG 1 cut(s) 521
AvaII GGWCC 1 cut(s) 1391
BaeGI GKGCMC 2 cut(s) 891, 1693
BanI GGYRCC 1 cut(s) 1688
BanII GRGCYC 2 cut(s) 528, 1207
BauI CACGAG 1 cut(s) 398
BbsI GAAGAC 4 cut(s) 208, 532, 779, 838
Bbv12I GWGCWC 1 cut(s) 1300
BbvI GCAGC 4 cut(s) 165, 940, 1055, 1711
BccI CCATC 3 cut(s) 772, 1019, 1098
BceAI ACGGC 4 cut(s) 118, 146, 185, 568
BcgI CGANNNNNNTGC 8 cut(s) 66, 100, 662, 696, 857, 891, 1743, 1777
BciT130I CCWGG 1 cut(s) 701
BcnI CCSGG 2 cut(s) 689, 1693
BcoDI GTCTC 9 cut(s) 141, 196, 241, 476, 482, 646, 1185, 1736, 1784
BfaI CTAG 1 cut(s) 66
BfoI RGCGCY 2 cut(s) 383, 759
BfuAI ACCTGC 1 cut(s) 815
BglII AGATCT 2 cut(s) 160, 1508
BisI GCNGC 8 cut(s) 70, 73, 93, 154, 274, 929, 1044, 1700
BlpI GCTNAGC 1 cut(s) 359
BlsI GCNGC 8 cut(s) 71, 74, 94, 155, 275, 930, 1045, 1701
Bme1390I CCNGG 3 cut(s) 689, 701, 1693
Bme18I GGWCC 1 cut(s) 1391
BmeT110I CYCGRG 1 cut(s) 521
BmgBI CACGTC 1 cut(s) 637
BmgT120I GGNCC 3 cut(s) 490, 732, 1391
BmiI GGNNCC 4 cut(s) 527, 686, 1587, 1690
BmrFI CCNGG 3 cut(s) 689, 701, 1693
BmsI GCATC 5 cut(s) 682, 889, 1403, 1610, 1646
BoxI GACNNNNGTC 1 cut(s) 749
BpiI GAAGAC 4 cut(s) 208, 532, 779, 838
BpmI CTGGAG 2 cut(s) 223, 683
Bpu1102I GCTNAGC 1 cut(s) 359
Bpu14I TTCGAA 2 cut(s) 106, 1181
BpuMI CCSGG 2 cut(s) 689, 1693
BsaHI GRCGYC 3 cut(s) 213, 406, 537
BsaI GGTCTC 2 cut(s) 646, 1736
BsaJI CCNNGG 1 cut(s) 1360
BsaXI ACNNNNNCTCC 4 cut(s) 422, 452, 1545, 1575
Bsc4I CCNNNNNNNGG 3 cut(s) 457, 487, 488
Bse118I RCCGGY 1 cut(s) 962
Bse1I ACTGG 2 cut(s) 1270, 1305
Bse3DI GCAATG 3 cut(s) 94, 102, 1053
BseBI CCWGG 1 cut(s) 701
BseDI CCNNGG 1 cut(s) 1360
BseGI GGATG 6 cut(s) 697, 847, 857, 901, 1418, 1668
BseLI CCNNNNNNNGG 3 cut(s) 457, 487, 488
BseMI GCAATG 3 cut(s) 94, 102, 1053
BseMII CTCAG 4 cut(s) 373, 487, 986, 1164
BseNI ACTGG 2 cut(s) 1270, 1305
BseRI GAGGAG 3 cut(s) 239, 242, 245
BseSI GKGCMC 2 cut(s) 891, 1693
BseX3I CGGCCG 2 cut(s) 73, 131
BseXI GCAGC 4 cut(s) 165, 940, 1055, 1711
BsgI GTGCAG 1 cut(s) 692
Bsh1236I CGCG 3 cut(s) 518, 633, 1606
Bsh1285I CGRYCG 3 cut(s) 76, 134, 469
BshFI GGCC 7 cut(s) 75, 133, 492, 555, 733, 995, 1342
BshNI GGYRCC 1 cut(s) 1688
BsiEI CGRYCG 3 cut(s) 76, 134, 469
BsiHKAI GWGCWC 1 cut(s) 1300
BsiHKCI CYCGRG 1 cut(s) 521
BsiSI CCGG 5 cut(s) 210, 688, 963, 1693, 1703
BslFI GGGAC 2 cut(s) 1298, 1553
BslI CCNNNNNNNGG 3 cut(s) 457, 487, 488
BsmAI GTCTC 9 cut(s) 141, 196, 241, 476, 482, 646, 1185, 1736, 1784
BsmBI CGTCTC 5 cut(s) 141, 196, 241, 476, 1784
BsmFI GGGAC 2 cut(s) 1298, 1553
BsmI GAATGC 3 cut(s) 1020, 1078, 1165
BsnI GGCC 7 cut(s) 75, 133, 492, 555, 733, 995, 1342
Bso31I GGTCTC 2 cut(s) 646, 1736
BsoBI CYCGRG 1 cut(s) 521
Bsp119I TTCGAA 2 cut(s) 106, 1181
Bsp1286I GDGCHC 5 cut(s) 528, 891, 1207, 1300, 1693
Bsp143I GATC 8 cut(s) 15, 160, 864, 957, 1093, 1423, 1508, 1820
Bsp1720I GCTNAGC 1 cut(s) 359
Bsp68I TCGCGA 1 cut(s) 633
BspANI GGCC 7 cut(s) 75, 133, 492, 555, 733, 995, 1342
BspCNI CTCAG 4 cut(s) 372, 486, 985, 1163
BspFNI CGCG 3 cut(s) 518, 633, 1606
BspLI GGNNCC 4 cut(s) 527, 686, 1587, 1690
BspMI ACCTGC 1 cut(s) 815
BspPI GGATC 2 cut(s) 23, 1431
BspQI GCTCTTC 1 cut(s) 1686
BspT104I TTCGAA 2 cut(s) 106, 1181
BspT107I GGYRCC 1 cut(s) 1688
BspTNI GGTCTC 2 cut(s) 646, 1736
BsrDI GCAATG 3 cut(s) 94, 102, 1053
BsrFI RCCGGY 1 cut(s) 962
BsrI ACTGG 2 cut(s) 1270, 1305
BssAI RCCGGY 1 cut(s) 962
BssECI CCNNGG 1 cut(s) 1360
BssMI GATC 8 cut(s) 15, 160, 864, 957, 1093, 1423, 1508, 1820
BssNI GRCGYC 3 cut(s) 213, 406, 537
BssSI CACGAG 1 cut(s) 398
Bst2BI CACGAG 1 cut(s) 398
Bst2UI CCWGG 1 cut(s) 701
Bst4CI ACNGT 3 cut(s) 514, 1730, 1795
Bst6I CTCTTC 4 cut(s) 302, 329, 458, 1686
BstACI GRCGYC 3 cut(s) 213, 406, 537
BstAPI GCANNNNNTGC 1 cut(s) 1052
BstBI TTCGAA 2 cut(s) 106, 1181
BstC8I GCNNGC 9 cut(s) 85, 245, 331, 371, 463, 720, 1072, 1076, 1378
BstDEI CTNAG 4 cut(s) 359, 473, 972, 1150
BstENI CCTNNNNNAGG 1 cut(s) 455
BstF5I GGATG 6 cut(s) 697, 847, 857, 901, 1418, 1668
BstFNI CGCG 3 cut(s) 518, 633, 1606
BstH2I RGCGCY 2 cut(s) 383, 759
BstHHI GCGC 3 cut(s) 382, 520, 758
BstKTI GATC 8 cut(s) 18, 163, 867, 960, 1096, 1426, 1511, 1823
BstMAI GTCTC 9 cut(s) 141, 196, 241, 476, 482, 646, 1185, 1736, 1784
BstMBI GATC 8 cut(s) 15, 160, 864, 957, 1093, 1423, 1508, 1820
BstMCI CGRYCG 3 cut(s) 76, 134, 469
BstMWI GCNNNNNNNGC 9 cut(s) 17, 89, 379, 764, 968, 1043, 1052, 1128, 1386
BstNI CCWGG 1 cut(s) 701
BstNSI RCATGY 5 cut(s) 465, 874, 1177, 1380, 1527
BstPAI GACNNNNGTC 1 cut(s) 749
BstSCI CCNGG 3 cut(s) 687, 699, 1691
BstSLI GKGCMC 2 cut(s) 891, 1693
BstUI CGCG 3 cut(s) 518, 633, 1606
BstV1I GCAGC 4 cut(s) 165, 940, 1055, 1711
BstV2I GAAGAC 4 cut(s) 208, 532, 779, 838
BstX2I RGATCY 3 cut(s) 160, 1423, 1508
BstYI RGATCY 3 cut(s) 160, 1423, 1508
BstZI CGGCCG 2 cut(s) 73, 131
BsuRI GGCC 7 cut(s) 75, 133, 492, 555, 733, 995, 1342
BtgZI GCGATG 1 cut(s) 1587
BtrI CACGTC 1 cut(s) 637
BtsCI GGATG 6 cut(s) 697, 847, 857, 901, 1418, 1668
BtsI GCAGTG 1 cut(s) 762
BtsIMutI CAGTG 3 cut(s) 762, 1158, 1298
BtuMI TCGCGA 1 cut(s) 633
BveI ACCTGC 1 cut(s) 815
Cac8I GCNNGC 9 cut(s) 85, 245, 331, 371, 463, 720, 1072, 1076, 1378
CaiI CAGNNNCTG 1 cut(s) 366
CfoI GCGC 3 cut(s) 382, 520, 758
Cfr10I RCCGGY 1 cut(s) 962
Cfr13I GGNCC 3 cut(s) 490, 732, 1391
CseI GACGC 4 cut(s) 202, 1049, 1120, 1314
Csp6I GTAC 1 cut(s) 568
CviQI GTAC 1 cut(s) 568
DdeI CTNAG 4 cut(s) 359, 473, 972, 1150
DpnI GATC 8 cut(s) 17, 162, 866, 959, 1095, 1425, 1510, 1822
DpnII GATC 8 cut(s) 15, 160, 864, 957, 1093, 1423, 1508, 1820
DrdI GACNNNNNNGTC 2 cut(s) 233, 542
DseDI GACNNNNNNGTC 2 cut(s) 233, 542
EaeI YGGCCR 2 cut(s) 73, 131
EagI CGGCCG 2 cut(s) 73, 131
Eam1104I CTCTTC 4 cut(s) 302, 329, 458, 1686
EarI CTCTTC 4 cut(s) 302, 329, 458, 1686
EclXI CGGCCG 2 cut(s) 73, 131
Eco24I GRGCYC 2 cut(s) 528, 1207
Eco31I GGTCTC 2 cut(s) 646, 1736
Eco47I GGWCC 1 cut(s) 1391
Eco47III AGCGCT 2 cut(s) 381, 757
Eco52I CGGCCG 2 cut(s) 73, 131
Eco57I CTGAAG 2 cut(s) 1617, 1667
Eco88I CYCGRG 1 cut(s) 521
EcoNI CCTNNNNNAGG 1 cut(s) 455
EcoRI GAATTC 1 cut(s) 1742
EcoRII CCWGG 1 cut(s) 699
EcoT22I ATGCAT 1 cut(s) 1418
EcoT38I GRGCYC 2 cut(s) 528, 1207
Esp3I CGTCTC 5 cut(s) 141, 196, 241, 476, 1784
FalI AAGNNNNNCTT 2 cut(s) 1148, 1180
FaqI GGGAC 2 cut(s) 1298, 1553
FauI CCCGC 2 cut(s) 378, 1067
FblI GTMKAC 1 cut(s) 1725
Fnu4HI GCNGC 8 cut(s) 70, 73, 93, 154, 274, 929, 1044, 1700
FokI GGATG 6 cut(s) 704, 844, 854, 908, 1425, 1675
FriOI GRGCYC 2 cut(s) 528, 1207
Fsp4HI GCNGC 8 cut(s) 70, 73, 93, 154, 274, 929, 1044, 1700
FspBI CTAG 1 cut(s) 66
GlaI GCGC 3 cut(s) 381, 519, 757
GluI GCNGC 8 cut(s) 70, 73, 93, 154, 274, 929, 1044, 1700
GsuI CTGGAG 2 cut(s) 223, 683
HaeII RGCGCY 2 cut(s) 383, 759
HaeIII GGCC 7 cut(s) 75, 133, 492, 555, 733, 995, 1342
HapII CCGG 5 cut(s) 210, 688, 963, 1693, 1703
HgaI GACGC 4 cut(s) 202, 1049, 1120, 1314
HhaI GCGC 3 cut(s) 382, 520, 758
Hin1I GRCGYC 3 cut(s) 213, 406, 537
Hin6I GCGC 3 cut(s) 380, 518, 756
HinP1I GCGC 3 cut(s) 380, 518, 756
HinfI GANTC 6 cut(s) 108, 227, 307, 1286, 1621, 1778
HpaII CCGG 5 cut(s) 210, 688, 963, 1693, 1703
Hpy166II GTNNAC 1 cut(s) 1726
Hpy188I TCNGA 4 cut(s) 574, 684, 1472, 1825
Hpy188III TCNNGA 3 cut(s) 428, 632, 1739
Hpy8I GTNNAC 1 cut(s) 1726
Hpy99I CGWCG 6 cut(s) 81, 408, 411, 539, 638, 1330
HpyAV CCTTC 4 cut(s) 241, 451, 994, 1663
HpyCH4III ACNGT 3 cut(s) 514, 1730, 1795
HpyCH4IV ACGT 5 cut(s) 406, 537, 636, 746, 979
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 89, 379, 764, 968, 1043, 1052, 1128, 1386
HpyF3I CTNAG 4 cut(s) 359, 473, 972, 1150
HpySE526I ACGT 5 cut(s) 406, 537, 636, 746, 979
Hsp92I GRCGYC 3 cut(s) 213, 406, 537
HspAI GCGC 3 cut(s) 380, 518, 756
Kzo9I GATC 8 cut(s) 15, 160, 864, 957, 1093, 1423, 1508, 1820
LguI GCTCTTC 1 cut(s) 1686
LmnI GCTCC 5 cut(s) 252, 296, 368, 531, 1295
Lsp1109I GCAGC 4 cut(s) 165, 940, 1055, 1711
LweI GCATC 5 cut(s) 682, 889, 1403, 1610, 1646
MaeI CTAG 1 cut(s) 66
MaeII ACGT 5 cut(s) 406, 537, 636, 746, 979
MaeIII GTNAC 6 cut(s) 99, 202, 410, 742, 975, 1351
MalI GATC 8 cut(s) 17, 162, 866, 959, 1095, 1425, 1510, 1822
MboI GATC 8 cut(s) 15, 160, 864, 957, 1093, 1423, 1508, 1820
MflI RGATCY 3 cut(s) 160, 1423, 1508
MhlI GDGCHC 5 cut(s) 528, 891, 1207, 1300, 1693
MluCI AATT 9 cut(s) 281, 804, 921, 1001, 1019, 1212, 1580, 1742, 1773
MlyI GAGTC 2 cut(s) 221, 1280
MmeI TCCRAC 2 cut(s) 926, 1273
Mph1103I ATGCAT 1 cut(s) 1418
MseI TTAA 2 cut(s) 999, 1448
MslI CAYNNNNRTG 4 cut(s) 894, 1083, 1151, 1642
MspA1I CMGCKG 1 cut(s) 156
MspI CCGG 5 cut(s) 210, 688, 963, 1693, 1703
MspR9I CCNGG 3 cut(s) 689, 701, 1693
Mva1269I GAATGC 3 cut(s) 1020, 1078, 1165
MvaI CCWGG 1 cut(s) 701
MvnI CGCG 3 cut(s) 518, 633, 1606
MwoI GCNNNNNNNGC 9 cut(s) 17, 89, 379, 764, 968, 1043, 1052, 1128, 1386
NciI CCSGG 2 cut(s) 689, 1693
NdeII GATC 8 cut(s) 15, 160, 864, 957, 1093, 1423, 1508, 1820
NlaIV GGNNCC 4 cut(s) 527, 686, 1587, 1690
NmeAIII GCCGAG 1 cut(s) 1341
NmuCI GTSAC 4 cut(s) 99, 742, 975, 1351
NruI TCGCGA 1 cut(s) 633
NsiI ATGCAT 1 cut(s) 1418
NspI RCATGY 5 cut(s) 465, 874, 1177, 1380, 1527
NspV TTCGAA 2 cut(s) 106, 1181
PaeI GCATGC 2 cut(s) 465, 1380
PaqCI CACCTGC 1 cut(s) 815
PciI ACATGT 2 cut(s) 870, 1173
PciSI GCTCTTC 1 cut(s) 1686
PctI GAATGC 3 cut(s) 1020, 1078, 1165
PfeI GAWTC 4 cut(s) 108, 307, 1621, 1778
PflFI GACNNNGTC 1 cut(s) 638
PkrI GCNGC 8 cut(s) 71, 74, 94, 155, 275, 930, 1045, 1701
PleI GAGTC 2 cut(s) 221, 1280
PpsI GAGTC 2 cut(s) 221, 1280
PscI ACATGT 2 cut(s) 870, 1173
PshAI GACNNNNGTC 1 cut(s) 749
Psp6I CCWGG 1 cut(s) 699
PspGI CCWGG 1 cut(s) 699
PspN4I GGNNCC 4 cut(s) 527, 686, 1587, 1690
PspPI GGNCC 3 cut(s) 490, 732, 1391
PstNI CAGNNNCTG 1 cut(s) 366
PsuI RGATCY 3 cut(s) 160, 1423, 1508
PsyI GACNNNGTC 1 cut(s) 638
RruI TCGCGA 1 cut(s) 633
RsaI GTAC 1 cut(s) 569
RsaNI GTAC 1 cut(s) 568
RseI CAYNNNNRTG 4 cut(s) 894, 1083, 1151, 1642
SapI GCTCTTC 1 cut(s) 1686
SaqAI TTAA 2 cut(s) 999, 1448
SatI GCNGC 8 cut(s) 70, 73, 93, 154, 274, 929, 1044, 1700
Sau3AI GATC 8 cut(s) 15, 160, 864, 957, 1093, 1423, 1508, 1820
Sau96I GGNCC 3 cut(s) 490, 732, 1391
SchI GAGTC 2 cut(s) 221, 1280
ScrFI CCNGG 3 cut(s) 689, 701, 1693
SduI GDGCHC 5 cut(s) 528, 891, 1207, 1300, 1693
SfaNI GCATC 5 cut(s) 682, 889, 1403, 1610, 1646
SfuI TTCGAA 2 cut(s) 106, 1181
SinI GGWCC 1 cut(s) 1391
SmiMI CAYNNNNRTG 4 cut(s) 894, 1083, 1151, 1642
SphI GCATGC 2 cut(s) 465, 1380
Sse9I AATT 9 cut(s) 281, 804, 921, 1001, 1019, 1212, 1580, 1742, 1773
SspMI CTAG 1 cut(s) 66
StyD4I CCNGG 3 cut(s) 687, 699, 1691
TaaI ACNGT 3 cut(s) 514, 1730, 1795
TaiI ACGT 5 cut(s) 409, 540, 639, 749, 982
TasI AATT 9 cut(s) 281, 804, 921, 1001, 1019, 1212, 1580, 1742, 1773
TatI WGTACW 1 cut(s) 567
TauI GCSGC 4 cut(s) 72, 75, 95, 276
TfiI GAWTC 4 cut(s) 108, 307, 1621, 1778
Tru1I TTAA 2 cut(s) 999, 1448
Tru9I TTAA 2 cut(s) 999, 1448
TscAI CASTG 3 cut(s) 769, 1158, 1305
TseFI GTSAC 4 cut(s) 99, 742, 975, 1351
TseI GCWGC 4 cut(s) 153, 928, 1043, 1699
Tsp45I GTSAC 4 cut(s) 99, 742, 975, 1351
TspDTI ATGAA 7 cut(s) 328, 779, 797, 846, 1456, 1735, 1820
TspGWI ACGGA 1 cut(s) 1425
TspRI CASTG 3 cut(s) 769, 1158, 1305
Tth111I GACNNNGTC 1 cut(s) 638
VpaK11BI GGWCC 1 cut(s) 1391
XagI CCTNNNNNAGG 1 cut(s) 455
XapI RAATTY 4 cut(s) 281, 804, 1212, 1742
XceI RCATGY 5 cut(s) 465, 874, 1177, 1380, 1527
XmiI GTMKAC 1 cut(s) 1725
XspI CTAG 1 cut(s) 66
ZraI GACGTC 2 cut(s) 407, 538
Zsp2I ATGCAT 1 cut(s) 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.