Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0015635

Physical Location & Seq

Genomic Coordinates Reverse (-)

14412007 .. 14414010

Gene Structure 2004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1044600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGTCCATGGAATGGCCACTCCAATTTTGAAACTCTTCCGCGGTCCCCACCAGAACATGCTTACACCATATATAGAACAAAAGAGAAAAAAAAAATACGATAAGAAAACAAAAAATCACATAACGGTGCACCACATCGCACGCTGTGGAAGCACTGTAATCCTCACGATTCACCAACCCTCGTCCAGAATTCAATTGCTTCTTGACCATCTGATCATCCTTGCTCGAGGGCAGCTCATGTACCAAGGATCACCAAAAGATGTTGCTACCCACCTTGGTCGAATGGGGCGCAAAGTGCATAAGGAAGAGAGCCCCATCGAATACCTCATTGATGTGATTCAGCAATATGATCAGTCTGAACTCGGGGTTGAGGCACTAGCCGAATTTGCACGTACTGGAATGAAACCCCCGCTGTTAGTTGATGTGGACGTGTCACTTTCGACTGCTATGCCAACACCAACACCACCGCGCCATGGCGGACGTGGAAGTGAAGACCTCGAGGACAAGGGAAGGTCTGGAAAACGCCTGCACTTACAAACTAGTACACATGCAGTCAATGATTTTGATCACAGTGTGAGAAGTCCTTACAGTAATAATAATTCAAGGTCATGGACTCCAAGCCATAGTGGAGTTATGCAGAAACTGCAGATGTTTACCCCTTCAAGGCAACGAGCAGGCCAAAAGATGCAAAGCCCCATGAGTGCATCTCCAGGCTACAACTATTCGAGTGAGATTCTTCCAAGCACACCAACACCCCATAGCAGTGACTACACAGTGGACGAAAATGACTATCGGACCCCAGATCTTGGTCCAAACACCAAGTCATACCACCATCTTGGTCCCAAATTCGCCAACTCATTCTTCCCGGAGACTTGGATTCTCATGAGGCGTAACTTCATCAACATCAGGCGGACGCCCGAGCTCTTCCTCTCAAGACTGGTAGTCCTTACATTCATGGGCTTCTTGATGGCCACCATGTTCCTACACCCACCAGATACCAGTCAAGGCATAACCAATCGCCTCAGTTTCTTCATCTTCACTGTCTGCCTCTTCTTCTTCTCATCAAACGACGCTGTCCCAGCCTTCATCCAAGAGCGCTTCATCTTCGTCCGTGAGACTGCTCACAATACCTACAGAGCCTCCTCATACACAATTGCAGGCCTAGTAACATATCTCCCCTTTCTTGCGTTGCAAGCATCTGTTTACGCTGGCATTGTTTGGTTTGCCTTGGGACTTAGAGGGCCATTCATATACTTTTTAGTGGTTCTCTATGTTTCTCTCCTCTCAACCAATTCATTTGTGGTGTTTGTCAGCTCAGTTGTGCCCAATTACATCTTGGGATATGCAGCCGTCATTGCCTTCACTGCGTTGTTCTTCTTGTTCTGTGGCTACTTCTTGAATAGCCATGACATCCCTGGCTACTGGGTATGGATGAACAAAGTCTCCACCATGACATATCCATATGAAGGGCTTATAATGAATCAGTACCAAACTGACGATACTTTTGGAAAAAACTCTGACGGGACCAACATTACCGGTTTCGACATCTTGGAAGGGCTTCGCATAGATTACGGCGGACAACACACCCTCTCTGAAGTAAAGAAATGGGAGAAGGTGTACATAATGTTGGGCATGACTGTTCTATACAGGGTTTTGTTTTACTTAGTCATTCGTTTCGCGTCCAAGAACCAGAGGACGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043492 GO:0044085 GO:0044425 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

567

Amino Acids

64.41

Weight (kDa)

9.37

Isoelectric Point (pI)

42.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane	PF01061	290 - 496	2.7e-40	ABC-2 type transporter
ABC2_membrane_3	PF12698	335 - 553	5.6e-07	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015635)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g29080
malus_domestica	MD01G1044600.v1.1 MD15G1306900.v1.1
prunus_persica	Prupe.6G208600_v2.0.a1
pyrus_communis	pycom15g27090
rosa_chinensis	RchiOBHm_Chr7g0221691
rosa_laevigata	RLG00000002137 RLG00000002338
rosa_multiflora	Rmu_sc0002824.1_g000008
rosa_roxburghii	Rroxscaffold_3G00238110
rosa_rugosa	Rorug07G0203000
rosa_samantha	Rh7AG343700 Rh7BG333800 Rh7CG361100 Rh7DG341400
rosa_wichuraiana	Rw7G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1475
AbsI	CCTCGAGG	1 cut(s)	497
AccB7I	CCANNNNNTGG	2 cut(s)	13, 806
AccII	CGCG	3 cut(s)	42, 469, 1679
AciI	CCGC	7 cut(s)	40, 42, 410, 467, 477, 910, 1575
AclWI	GGATC	1 cut(s)	256
AcoI	YGGCCR	2 cut(s)	15, 969
AcsI	RAATTY	3 cut(s)	189, 383, 845
AcuI	CTGAAG	1 cut(s)	1614
AcyI	GRCGYC	1 cut(s)	914
AdeI	CACNNNGTG	2 cut(s)	146, 574
AfaI	GTAC	5 cut(s)	242, 394, 544, 1487, 1619
AfeI	AGCGCT	1 cut(s)	1097
AfiI	CCNNNNNNNGG	5 cut(s)	13, 473, 663, 806, 1466
AflIII	ACRYGT	1 cut(s)	429
AgeI	ACCGGT	1 cut(s)	1535
AgsI	TTSAA	5 cut(s)	31, 194, 603, 663, 1399
AhdI	GACNNNNNGTC	1 cut(s)	941
AhlI	ACTAGT	1 cut(s)	539
AjiI	CACGTC	2 cut(s)	430, 482
AjnI	CCWGG	2 cut(s)	709, 1414
AjuI	GAANNNNNNNTTGG	2 cut(s)	845, 877
AloI	GAACNNNNNNTCC	2 cut(s)	1427, 1459
AluBI	AGCT	3 cut(s)	235, 922, 1314
AluI	AGCT	3 cut(s)	235, 922, 1314
Alw21I	GWGCWC	2 cut(s)	132, 924
Alw26I	GTCTC	3 cut(s)	863, 1109, 1447
Alw44I	GTGCAC	1 cut(s)	128
AlwI	GGATC	1 cut(s)	256
AlwNI	CAGNNNCTG	1 cut(s)	643
Ama87I	CYCGRG	4 cut(s)	225, 362, 497, 917
Aor51HI	AGCGCT	1 cut(s)	1097
AoxI	GGCC	5 cut(s)	15, 676, 969, 1159, 1241
ApaLI	GTGCAC	1 cut(s)	128
ApeKI	GCWGC	2 cut(s)	232, 1346
ApoI	RAATTY	3 cut(s)	189, 383, 845
ArsI	GACNNNNNNTTYG	4 cut(s)	806, 838, 1487, 1519
AsiGI	ACCGGT	1 cut(s)	1535
Asp700I	GAANNNNTTC	2 cut(s)	35, 1557
AspLEI	GCGC	3 cut(s)	291, 471, 1098
AspS9I	GGNCC	7 cut(s)	4, 44, 795, 809, 839, 1241, 1524
AsuC2I	CCSGG	1 cut(s)	866
AsuHPI	GGTGA	2 cut(s)	164, 243
AvaI	CYCGRG	4 cut(s)	225, 362, 497, 917
AvaII	GGWCC	6 cut(s)	4, 44, 795, 809, 839, 1524
BaeGI	GKGCMC	2 cut(s)	132, 1326
BalI	TGGCCA	2 cut(s)	17, 971
BanII	GRGCYC	2 cut(s)	314, 924
BbsI	GAAGAC	1 cut(s)	498
Bbv12I	GWGCWC	2 cut(s)	132, 924
BbvI	GCAGC	2 cut(s)	244, 1358
BccI	CCATC	4 cut(s)	216, 323, 840, 961
BceAI	ACGGC	2 cut(s)	1334, 1588
BcgI	CGANNNNNNTGC	2 cut(s)	430, 464
BciT130I	CCWGG	2 cut(s)	711, 1416
BclI	TGATCA	3 cut(s)	213, 349, 565
BcnI	CCSGG	1 cut(s)	866
BcoDI	GTCTC	3 cut(s)	863, 1109, 1447
BcuI	ACTAGT	1 cut(s)	539
BfaI	CTAG	3 cut(s)	377, 540, 1163
BfmI	CTRYAG	2 cut(s)	644, 1132
BfoI	RGCGCY	1 cut(s)	1099
BglII	AGATCT	1 cut(s)	802
BisI	GCNGC	2 cut(s)	233, 1347
BlsI	GCNGC	2 cut(s)	234, 1348
Bme1390I	CCNGG	3 cut(s)	711, 866, 1416
Bme18I	GGWCC	6 cut(s)	4, 44, 795, 809, 839, 1524
BmeRI	GACNNNNNGTC	1 cut(s)	941
BmeT110I	CYCGRG	4 cut(s)	225, 362, 497, 917
BmgBI	CACGTC	2 cut(s)	430, 482
BmgT120I	GGNCC	7 cut(s)	4, 44, 795, 809, 839, 1241, 1524
BmiI	GGNNCC	4 cut(s)	46, 797, 841, 1525
BmrFI	CCNGG	3 cut(s)	711, 866, 1416
BmrI	ACTGGG	1 cut(s)	1432
BmsI	GCATC	3 cut(s)	675, 713, 1205
BmuI	ACTGGG	1 cut(s)	1432
BpiI	GAAGAC	1 cut(s)	498
BplI	GAGNNNNNCTC	4 cut(s)	219, 251, 691, 723
BpmI	CTGGAG	1 cut(s)	693
BpuEI	CTTGAG	1 cut(s)	916
BpuMI	CCSGG	1 cut(s)	866
BsaAI	YACGTR	1 cut(s)	392
BsaBI	GATNNNNATC	1 cut(s)	564
BsaHI	GRCGYC	1 cut(s)	914
BsaJI	CCNNGG	7 cut(s)	7, 40, 244, 274, 472, 1227, 1414
BsaWI	WCCGGW	1 cut(s)	1535
BsaXI	ACNNNNNCTCC	6 cut(s)	1124, 1154, 1427, 1457, 1601, 1631
Bsc4I	CCNNNNNNNGG	5 cut(s)	13, 473, 663, 806, 1466
Bse118I	RCCGGY	1 cut(s)	1535
Bse1I	ACTGG	4 cut(s)	400, 942, 999, 1427
Bse3DI	GCAATG	1 cut(s)	1353
Bse8I	GATNNNNATC	1 cut(s)	564
BseBI	CCWGG	2 cut(s)	711, 1416
BseDI	CCNNGG	7 cut(s)	7, 40, 244, 274, 472, 1227, 1414
BseGI	GGATG	4 cut(s)	216, 1086, 1410, 1437
BseJI	GATNNNNATC	1 cut(s)	564
BseLI	CCNNNNNNNGG	5 cut(s)	13, 473, 663, 806, 1466
BseMI	GCAATG	1 cut(s)	1353
BseMII	CTCAG	2 cut(s)	1036, 1329
BseNI	ACTGG	4 cut(s)	400, 942, 999, 1427
BseRI	GAGGAG	2 cut(s)	1132, 1271
BseSI	GKGCMC	2 cut(s)	132, 1326
BseXI	GCAGC	2 cut(s)	244, 1358
BseYI	CCCAGC	1 cut(s)	1078
BsgI	GTGCAG	1 cut(s)	512
Bsh1236I	CGCG	3 cut(s)	42, 469, 1679
BshFI	GGCC	5 cut(s)	17, 678, 971, 1161, 1243
BshTI	ACCGGT	1 cut(s)	1535
BsiHKAI	GWGCWC	2 cut(s)	132, 924
BsiHKCI	CYCGRG	4 cut(s)	225, 362, 497, 917
BsiSI	CCGG	2 cut(s)	866, 1536
BslFI	GGGAC	5 cut(s)	30, 825, 1061, 1245, 1537
BslI	CCNNNNNNNGG	5 cut(s)	13, 473, 663, 806, 1466
BsmAI	GTCTC	3 cut(s)	863, 1109, 1447
BsmFI	GGGAC	5 cut(s)	30, 825, 1061, 1245, 1537
BsnI	GGCC	5 cut(s)	17, 678, 971, 1161, 1243
BsoBI	CYCGRG	4 cut(s)	225, 362, 497, 917
Bsp1286I	GDGCHC	4 cut(s)	132, 314, 924, 1326
Bsp1407I	TGTACA	1 cut(s)	1617
Bsp143I	GATC	5 cut(s)	213, 248, 349, 565, 802
Bsp19I	CCATGG	2 cut(s)	7, 472
BspACI	CCGC	7 cut(s)	40, 42, 410, 467, 477, 910, 1575
BspANI	GGCC	5 cut(s)	17, 678, 971, 1161, 1243
BspCNI	CTCAG	2 cut(s)	1035, 1328
BspFNI	CGCG	3 cut(s)	42, 469, 1679
BspHI	TCATGA	1 cut(s)	882
BspLI	GGNNCC	4 cut(s)	46, 797, 841, 1525
BspMAI	CTGCAG	1 cut(s)	648
BspPI	GGATC	1 cut(s)	256
BspQI	GCTCTTC	1 cut(s)	929
BsrDI	GCAATG	1 cut(s)	1353
BsrFI	RCCGGY	1 cut(s)	1535
BsrGI	TGTACA	1 cut(s)	1617
BsrI	ACTGG	4 cut(s)	400, 942, 999, 1427
BssAI	RCCGGY	1 cut(s)	1535
BssECI	CCNNGG	7 cut(s)	7, 40, 244, 274, 472, 1227, 1414
BssMI	GATC	5 cut(s)	213, 248, 349, 565, 802
BssNI	GRCGYC	1 cut(s)	914
BssT1I	CCWWGG	5 cut(s)	7, 244, 274, 472, 1227
Bst2UI	CCWGG	2 cut(s)	711, 1416
Bst4CI	ACNGT	7 cut(s)	127, 157, 572, 590, 775, 1042, 1639
Bst6I	CTCTTC	4 cut(s)	41, 300, 929, 1055
BstACI	GRCGYC	1 cut(s)	914
BstAPI	GCANNNNNTGC	1 cut(s)	643
BstAUI	TGTACA	1 cut(s)	1617
BstBAI	YACGTR	1 cut(s)	392
BstC8I	GCNNGC	6 cut(s)	142, 527, 676, 1159, 1194, 1210
BstDEI	CTNAG	4 cut(s)	1022, 1235, 1315, 1663
BstDSI	CCRYGG	3 cut(s)	7, 40, 472
BstF5I	GGATG	4 cut(s)	216, 1086, 1410, 1437
BstFNI	CGCG	3 cut(s)	42, 469, 1679
BstH2I	RGCGCY	1 cut(s)	1099
BstHHI	GCGC	3 cut(s)	291, 471, 1098
BstKTI	GATC	5 cut(s)	216, 251, 352, 568, 805
BstMAI	GTCTC	3 cut(s)	863, 1109, 1447
BstMBI	GATC	5 cut(s)	213, 248, 349, 565, 802
BstMWI	GCNNNNNNNGC	8 cut(s)	150, 295, 386, 643, 1079, 1193, 1355, 1364
BstNI	CCWGG	2 cut(s)	711, 1416
BstNSI	RCATGY	2 cut(s)	61, 551
BstSCI	CCNGG	3 cut(s)	709, 864, 1414
BstSFI	CTRYAG	2 cut(s)	644, 1132
BstSLI	GKGCMC	2 cut(s)	132, 1326
BstUI	CGCG	3 cut(s)	42, 469, 1679
BstV1I	GCAGC	2 cut(s)	244, 1358
BstV2I	GAAGAC	1 cut(s)	498
BstX2I	RGATCY	1 cut(s)	802
BstXI	CCANNNNNNTGG	1 cut(s)	836
BstYI	RGATCY	1 cut(s)	802
BsuRI	GGCC	5 cut(s)	17, 678, 971, 1161, 1243
BtgI	CCRYGG	3 cut(s)	7, 40, 472
BtgZI	GCGATG	1 cut(s)	121
BtrI	CACGTC	2 cut(s)	430, 482
BtsCI	GGATG	4 cut(s)	216, 1086, 1410, 1437
BtsI	GCAGTG	2 cut(s)	769, 1362
BtsIMutI	CAGTG	6 cut(s)	153, 577, 769, 780, 1038, 1362
Cac8I	GCNNGC	6 cut(s)	142, 527, 676, 1159, 1194, 1210
CaiI	CAGNNNCTG	1 cut(s)	643
CciI	TCATGA	1 cut(s)	882
CfoI	GCGC	3 cut(s)	291, 471, 1098
Cfr10I	RCCGGY	1 cut(s)	1535
Cfr13I	GGNCC	7 cut(s)	4, 44, 795, 809, 839, 1241, 1524
Cfr42I	CCGCGG	1 cut(s)	43
CseI	GACGC	3 cut(s)	922, 1079, 1668
Csp6I	GTAC	5 cut(s)	241, 393, 543, 1486, 1618
CspAI	ACCGGT	1 cut(s)	1535
CviQI	GTAC	5 cut(s)	241, 393, 543, 1486, 1618
DdeI	CTNAG	4 cut(s)	1022, 1235, 1315, 1663
DpnI	GATC	5 cut(s)	215, 250, 351, 567, 804
DpnII	GATC	5 cut(s)	213, 248, 349, 565, 802
DraIII	CACNNNGTG	2 cut(s)	146, 574
DriI	GACNNNNNGTC	1 cut(s)	941
EaeI	YGGCCR	2 cut(s)	15, 969
Eam1104I	CTCTTC	4 cut(s)	41, 300, 929, 1055
Eam1105I	GACNNNNNGTC	1 cut(s)	941
EarI	CTCTTC	4 cut(s)	41, 300, 929, 1055
EciI	GGCGGA	3 cut(s)	492, 925, 1590
Ecl136II	GAGCTC	1 cut(s)	922
Eco130I	CCWWGG	5 cut(s)	7, 244, 274, 472, 1227
Eco147I	AGGCCT	1 cut(s)	1161
Eco24I	GRGCYC	2 cut(s)	314, 924
Eco47I	GGWCC	6 cut(s)	4, 44, 795, 809, 839, 1524
Eco47III	AGCGCT	1 cut(s)	1097
Eco53kI	GAGCTC	1 cut(s)	922
Eco57I	CTGAAG	1 cut(s)	1614
Eco88I	CYCGRG	4 cut(s)	225, 362, 497, 917
EcoICRI	GAGCTC	1 cut(s)	922
EcoRI	GAATTC	1 cut(s)	189
EcoRII	CCWGG	2 cut(s)	709, 1414
EcoT14I	CCWWGG	5 cut(s)	7, 244, 274, 472, 1227
EcoT38I	GRGCYC	2 cut(s)	314, 924
ErhI	CCWWGG	5 cut(s)	7, 244, 274, 472, 1227
FaqI	GGGAC	5 cut(s)	30, 825, 1061, 1245, 1537
FauI	CCCGC	1 cut(s)	417
FauNDI	CATATG	1 cut(s)	1462
FbaI	TGATCA	3 cut(s)	213, 349, 565
Fnu4HI	GCNGC	2 cut(s)	233, 1347
FokI	GGATG	4 cut(s)	203, 1073, 1397, 1444
FriOI	GRGCYC	2 cut(s)	314, 924
Fsp4HI	GCNGC	2 cut(s)	233, 1347
FspBI	CTAG	3 cut(s)	377, 540, 1163
GlaI	GCGC	3 cut(s)	290, 470, 1097
GluI	GCNGC	2 cut(s)	233, 1347
GsaI	CCCAGC	1 cut(s)	1082
GsuI	CTGGAG	1 cut(s)	693
HaeII	RGCGCY	1 cut(s)	1099
HaeIII	GGCC	5 cut(s)	17, 678, 971, 1161, 1243
HapII	CCGG	2 cut(s)	866, 1536
HgaI	GACGC	3 cut(s)	922, 1079, 1668
HhaI	GCGC	3 cut(s)	291, 471, 1098
Hin1I	GRCGYC	1 cut(s)	914
Hin6I	GCGC	3 cut(s)	289, 469, 1096
HinP1I	GCGC	3 cut(s)	289, 469, 1096
HinfI	GANTC	6 cut(s)	169, 337, 613, 733, 877, 1480
HpaII	CCGG	2 cut(s)	866, 1536
HphI	GGTGA	2 cut(s)	164, 243
Hpy166II	GTNNAC	7 cut(s)	130, 427, 545, 654, 778, 1204, 1618
Hpy188I	TCNGA	5 cut(s)	213, 358, 795, 1519, 1594
Hpy188III	TCNNGA	8 cut(s)	166, 186, 203, 516, 883, 933, 964, 1396
Hpy8I	GTNNAC	7 cut(s)	130, 427, 545, 654, 778, 1204, 1618
Hpy99I	CGWCG	1 cut(s)	1073
HpyAV	CCTTC	7 cut(s)	504, 669, 1093, 1369, 1460, 1547, 1606
HpyCH4III	ACNGT	7 cut(s)	127, 157, 572, 590, 775, 1042, 1639
HpyCH4IV	ACGT	4 cut(s)	391, 429, 481, 1697
HpyF10VI	GCNNNNNNNGC	8 cut(s)	150, 295, 386, 643, 1079, 1193, 1355, 1364
HpyF3I	CTNAG	4 cut(s)	1022, 1235, 1315, 1663
HpySE526I	ACGT	4 cut(s)	391, 429, 481, 1697
Hsp92I	GRCGYC	1 cut(s)	914
HspAI	GCGC	3 cut(s)	289, 469, 1096
Ksp22I	TGATCA	3 cut(s)	213, 349, 565
KspI	CCGCGG	1 cut(s)	43
Kzo9I	GATC	5 cut(s)	213, 248, 349, 565, 802
LguI	GCTCTTC	1 cut(s)	929
Lsp1109I	GCAGC	2 cut(s)	244, 1358
LweI	GCATC	3 cut(s)	675, 713, 1205
MaeI	CTAG	3 cut(s)	377, 540, 1163
MaeII	ACGT	4 cut(s)	391, 429, 481, 1697
MaeIII	GTNAC	4 cut(s)	432, 764, 890, 1165
MalI	GATC	5 cut(s)	215, 250, 351, 567, 804
MboI	GATC	5 cut(s)	213, 248, 349, 565, 802
MfeI	CAATTG	2 cut(s)	194, 1152
MflI	RGATCY	1 cut(s)	802
MhlI	GDGCHC	4 cut(s)	132, 314, 924, 1326
MlsI	TGGCCA	2 cut(s)	17, 971
MluCI	AATT	9 cut(s)	24, 189, 194, 383, 598, 845, 1152, 1291, 1327
MluNI	TGGCCA	2 cut(s)	17, 971
MlyI	GAGTC	1 cut(s)	607
Mox20I	TGGCCA	2 cut(s)	17, 971
MroXI	GAANNNNTTC	2 cut(s)	35, 1557
MscI	TGGCCA	2 cut(s)	17, 971
MslI	CAYNNNNRTG	3 cut(s)	125, 332, 762
Msp20I	TGGCCA	2 cut(s)	17, 971
MspA1I	CMGCKG	2 cut(s)	42, 412
MspI	CCGG	2 cut(s)	866, 1536
MspR9I	CCNGG	3 cut(s)	711, 866, 1416
MunI	CAATTG	2 cut(s)	194, 1152
MvaI	CCWGG	2 cut(s)	711, 1416
MvnI	CGCG	3 cut(s)	42, 469, 1679
MwoI	GCNNNNNNNGC	8 cut(s)	150, 295, 386, 643, 1079, 1193, 1355, 1364
NciI	CCSGG	1 cut(s)	866
NcoI	CCATGG	2 cut(s)	7, 472
NdeI	CATATG	1 cut(s)	1462
NdeII	GATC	5 cut(s)	213, 248, 349, 565, 802
NlaIV	GGNNCC	4 cut(s)	46, 797, 841, 1525
NmuCI	GTSAC	2 cut(s)	432, 764
NspI	RCATGY	2 cut(s)	61, 551
PaeR7I	CTCGAG	2 cut(s)	225, 497
PagI	TCATGA	1 cut(s)	882
PceI	AGGCCT	1 cut(s)	1161
PciSI	GCTCTTC	1 cut(s)	929
PdmI	GAANNNNTTC	2 cut(s)	35, 1557
PfeI	GAWTC	5 cut(s)	169, 337, 733, 877, 1480
PflFI	GACNNNGTC	1 cut(s)	1073
PflMI	CCANNNNNTGG	2 cut(s)	13, 806
PfoI	TCCNGGA	1 cut(s)	864
PinAI	ACCGGT	1 cut(s)	1535
PkrI	GCNGC	2 cut(s)	234, 1348
PleI	GAGTC	1 cut(s)	607
PpsI	GAGTC	1 cut(s)	607
Ppu21I	YACGTR	1 cut(s)	392
PsiI	TTATAA	1 cut(s)	1475
Psp124BI	GAGCTC	1 cut(s)	924
Psp6I	CCWGG	2 cut(s)	709, 1414
PspFI	CCCAGC	1 cut(s)	1078
PspGI	CCWGG	2 cut(s)	709, 1414
PspN4I	GGNNCC	4 cut(s)	46, 797, 841, 1525
PspPI	GGNCC	7 cut(s)	4, 44, 795, 809, 839, 1241, 1524
PspXI	VCTCGAGB	2 cut(s)	225, 497
PstI	CTGCAG	1 cut(s)	648
PstNI	CAGNNNCTG	1 cut(s)	643
PsuI	RGATCY	1 cut(s)	802
PsyI	GACNNNGTC	1 cut(s)	1073
RsaI	GTAC	5 cut(s)	242, 394, 544, 1487, 1619
RsaNI	GTAC	5 cut(s)	241, 393, 543, 1486, 1618
RseI	CAYNNNNRTG	3 cut(s)	125, 332, 762
SacI	GAGCTC	1 cut(s)	924
SacII	CCGCGG	1 cut(s)	43
SapI	GCTCTTC	1 cut(s)	929
SatI	GCNGC	2 cut(s)	233, 1347
Sau3AI	GATC	5 cut(s)	213, 248, 349, 565, 802
Sau96I	GGNCC	7 cut(s)	4, 44, 795, 809, 839, 1241, 1524
SchI	GAGTC	1 cut(s)	607
ScrFI	CCNGG	3 cut(s)	711, 866, 1416
SduI	GDGCHC	4 cut(s)	132, 314, 924, 1326
SfaNI	GCATC	3 cut(s)	675, 713, 1205
SfcI	CTRYAG	2 cut(s)	644, 1132
Sfr274I	CTCGAG	2 cut(s)	225, 497
Sfr303I	CCGCGG	1 cut(s)	43
SgrBI	CCGCGG	1 cut(s)	43
SinI	GGWCC	6 cut(s)	4, 44, 795, 809, 839, 1524
SlaI	CTCGAG	2 cut(s)	225, 497
SmiMI	CAYNNNNRTG	3 cut(s)	125, 332, 762
SmlI	CTYRAG	3 cut(s)	225, 497, 931
SmoI	CTYRAG	3 cut(s)	225, 497, 931
SpeI	ACTAGT	1 cut(s)	539
Sse9I	AATT	9 cut(s)	24, 189, 194, 383, 598, 845, 1152, 1291, 1327
SseBI	AGGCCT	1 cut(s)	1161
SsiI	CCGC	7 cut(s)	40, 42, 410, 467, 477, 910, 1575
SspMI	CTAG	3 cut(s)	377, 540, 1163
SstI	GAGCTC	1 cut(s)	924
StuI	AGGCCT	1 cut(s)	1161
StyD4I	CCNGG	3 cut(s)	709, 864, 1414
StyI	CCWWGG	5 cut(s)	7, 244, 274, 472, 1227
TaaI	ACNGT	7 cut(s)	127, 157, 572, 590, 775, 1042, 1639
TaiI	ACGT	4 cut(s)	394, 432, 484, 1700
TaqI	TCGA	7 cut(s)	226, 280, 318, 440, 498, 725, 1542
TasI	AATT	9 cut(s)	24, 189, 194, 383, 598, 845, 1152, 1291, 1327
TatI	WGTACW	2 cut(s)	542, 1617
TfiI	GAWTC	5 cut(s)	169, 337, 733, 877, 1480
TscAI	CASTG	6 cut(s)	160, 577, 769, 780, 1045, 1369
TseFI	GTSAC	2 cut(s)	432, 764
TseI	GCWGC	2 cut(s)	232, 1346
Tsp45I	GTSAC	2 cut(s)	432, 764
TspGWI	ACGGA	1 cut(s)	1100
TspRI	CASTG	6 cut(s)	160, 577, 769, 780, 1045, 1369
Tth111I	GACNNNGTC	1 cut(s)	1073
Van91I	CCANNNNNTGG	2 cut(s)	13, 806
VneI	GTGCAC	1 cut(s)	128
VpaK11BI	GGWCC	6 cut(s)	4, 44, 795, 809, 839, 1524
XapI	RAATTY	3 cut(s)	189, 383, 845
XceI	RCATGY	2 cut(s)	61, 551
XcmI	CCANNNNNNNNNTGG	4 cut(s)	479, 1297, 1333, 1412
XhoI	CTCGAG	2 cut(s)	225, 497
XmnI	GAANNNNTTC	2 cut(s)	35, 1557
XspI	CTAG	3 cut(s)	377, 540, 1163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.