Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0015635

Physical Location & Seq

Genomic Coordinates Reverse (-)

43403483 .. 43406766

Gene Structure 3284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG343700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGCTCATCGTCCCAATGACCATCCTCGGCGCGAGACAGTGATCGATATAGGGCACCGGAAGCCCGCAAACTTCACTGGCGGGCTCGAGTTTTCGAGCCTCACATACACGGTGACAAAGAAGATCAAGCTTGACGGGAAATGGCTGAAGCAAGATGTAGACTTGCTCCACAAGATCACAGGTTTTGCACCCAAGGGTTGCATCACGGCTGTGATGGGTCCCAGTGGGGCCGGAAAGTCGACGTTCTTGGATGGAGTTGCCGGGAGAATAGCGAGTGGAAGTCTTAAAGGGAGAGTGTCCTTGGACGGGAAGGAAATGAGTCCTAGCATAATTAAGAGGACTTCAGCTTATATTATGCAGGATGATAGGCTTTTCCCAACCCTTACAGTCTATGAGACTTTGATGTTCGCTGCTGATTTTAGGTTGGGGCCGGTCACAACTACTGAGAAGAAACAGCGTGTTGAAAAGTTGATTCAACAGCTCGGCTTATCGTCAGCTCGGAACACTTACATAGGTGATGAGGGCAGTCGAGGAGTGTCTGGAGGAGAGCGCCGCCGAGTCTCTATTGGTGTTGACATCATTCACGGACCTGCCCTCCTCTTCCTCGACGAGCCAACATCAGGCCTGGACTCCACTAGTGCTCACAGTGTTATCGAAAAGGTCCACCACATTGCACGCTCTGGAAGCACTGTGATCCTCACCATTCACCAGCCCTCGTCAAGAATCCAATTGCTTCTCGACCATATGCTTATCCTAGCTCGTGGCCAGCTCATGTATCAAGGGTCACCGAAAGACGTGTCACTTCATCTCGGCCGAATGGGACTGAAAGTCCACAAAGAAGAGAGTCCAATTGAGTACCTCATTGATGTTATTCAGGAATATGACCAATCCGAACATGGAGTCGAGGCACTCGCTGAGTTTGCACGTACAGGTGTGAAACCCCCTAGGTTGATTGAGGGAGACGTGTCGATTTCAACCATTCTCCCCACTCCAACTCCGCCACGACACGGTGGCCGTGGGAATGATTTAGGCCTCAAGAAGAATGGAAAGCGGCTTCCTTTGCAGACTAGTACACATGTGATCAATGATTTTGATCATAGTTTGAGGAGCCCTTATAGCAGCAAGAGCCCTTATACTTCGAGGTCATGGACTGCTGGGAATAGTGGAGTCATGGACACACTTCACAGGTTTACTCCTTTGAGGAAACCTAAAGATCTCAAGATGCAAAGCCCCATGAGTGCATCCCCTGGCTACAATTATTCAAGTGAGATCATTCAGAGCACACCAACACCACACAGCAGTGACTACACAGTAAATGAAAACGACTATCTGACCCCTGATTATGATCCAAATGCCTCTTCCCACCACAACCTGGCACCCAAATTTGCCAACTCCTTCTTCCCCGAGACATGGATCCTTATGCGCCGCAACTTCATAAACATTCGCAGAACACCCGAGCTCTTCCTCTCAAGGCTCGTAGTCCTTACATTCATGGGCTTCTTAATGGCCACCATGTTCAAGAACCCGCCCGAGAACTCTCAAGGCATCACCAACCGCCTCAGTTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCATCCAACGATGCTGTCCCCGCCTTCATCCAAGAGCGCTTCATCTTTGTTCGCGAGACCGCTCACAATGCCTACCGAGCCTCCTCTTACACCATAGCTAGCCTAATCACTTACCTACCTTTTCTTCTGCTCCAAGCTGCAGTTTACGCAGGTATTGTCTGGTTTGCCTTAAAGCTCCGCGGACCTTTCCTCTACTTCTTGGTCGTTCTCTATGTCTCTCTCCTCTCTACAAACTCTTTTGTGGTGTTTGTGAGCTCAGTTGTGCCCAACTACATCTTGGGTTACGCCGCAGTCATTGCTTTCACTGCTCTCTTCTTCTTGTTCTGTGGATACTTCTTGAACAGTAATGACATTCCTAAATATTGGAAGTGGATGAACTACGTCTCCACCATGACATACCCATATGAAGGTTTGATAATGAATCAATATCAGACCCATCTTCCTTTCGGACAAAATCCAAATGGTAGCAACATTACTGGTTTTCAAATTTTGGACAGTCTTCATATAAACTATGGAGGAGGCGAGACCCTGTCTTCGGCGAAGAAGTGGGAGAAGATTTACATAATGTTGGGTTGGACTGTCCTGTATAGGATCTTGTTTTACTTGGTCATTCGATTCTTCTCCAAGAACCAGAGGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043492 GO:0044085 GO:0044425 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

745

Amino Acids

83.65

Weight (kDa)

9.44

Isoelectric Point (pI)

42.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	61 - 207	1.3e-25	ABC transporter
ABC2_membrane	PF01061	469 - 675	8.8e-43	ABC-2 type transporter
ABC2_membrane_3	PF12698	511 - 732	1.9e-08	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015635)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g29080
malus_domestica	MD01G1044600.v1.1 MD15G1306900.v1.1
prunus_persica	Prupe.6G208600_v2.0.a1
pyrus_communis	pycom15g27090
rosa_chinensis	RchiOBHm_Chr7g0221691
rosa_laevigata	RLG00000002137 RLG00000002338
rosa_multiflora	Rmu_sc0002824.1_g000008
rosa_roxburghii	Rroxscaffold_3G00238110
rosa_rugosa	Rorug07G0203000
rosa_samantha	Rh7AG343700 Rh7BG333800 Rh7CG361100 Rh7DG341400
rosa_wichuraiana	Rw7G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	598, 1736
AccB1I	GGYRCC	2 cut(s)	54, 1375
AccB7I	CCANNNNNTGG	1 cut(s)	1372
AccBSI	CCGCTC	1 cut(s)	1658
AccI	GTMKAC	2 cut(s)	159, 239
AccII	CGCG	3 cut(s)	33, 1650, 1776
AclWI	GGATC	5 cut(s)	688, 1340, 1408, 1421, 2195
AcoI	YGGCCR	4 cut(s)	763, 811, 1012, 1506
AcsI	RAATTY	2 cut(s)	1382, 2082
AcuI	CTGAAG	2 cut(s)	167, 327
AfaI	GTAC	3 cut(s)	857, 928, 1072
AfeI	AGCGCT	1 cut(s)	1634
AfiI	CCNNNNNNNGG	7 cut(s)	306, 620, 1007, 1372, 1410, 2003, 2131
AflIII	ACRYGT	3 cut(s)	795, 963, 1075
AgsI	TTSAA	7 cut(s)	464, 476, 975, 1263, 1519, 1936, 2081
AhdI	GACNNNNNGTC	1 cut(s)	827
AhlI	ACTAGT	2 cut(s)	635, 1067
AjiI	CACGTC	2 cut(s)	796, 964
AjnI	CCWGG	3 cut(s)	624, 1246, 1371
AjuI	GAANNNNNNNTTGG	4 cut(s)	1342, 1374, 1382, 1414
AleI	CACNNNNGTG	2 cut(s)	209, 1299
AloI	GAACNNNNNNTCC	2 cut(s)	1964, 1996
Alw21I	GWGCWC	4 cut(s)	643, 1283, 1461, 1853
Alw26I	GTCTC	9 cut(s)	29, 389, 565, 954, 1400, 1646, 1816, 1984, 2114
AlwI	GGATC	5 cut(s)	688, 1340, 1408, 1421, 2195
Ama87I	CYCGRG	4 cut(s)	86, 1403, 1454, 1529
Aor51HI	AGCGCT	1 cut(s)	1634
AoxI	GGCC	8 cut(s)	228, 428, 622, 763, 811, 1012, 1030, 1506
ApeKI	GCWGC	3 cut(s)	410, 1119, 1733
ApoI	RAATTY	2 cut(s)	1382, 2082
ArsI	GACNNNNNNTTYG	6 cut(s)	782, 814, 885, 917, 2113, 2145
AspA2I	CCTAGG	1 cut(s)	944
AspLEI	GCGC	4 cut(s)	33, 552, 1425, 1635
AspS9I	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1778
AsuC2I	CCSGG	1 cut(s)	262
AsuHPI	GGTGA	7 cut(s)	124, 527, 691, 698, 777, 1540, 1567
AsuNHI	GCTAGC	1 cut(s)	1694
AvaI	CYCGRG	4 cut(s)	86, 1403, 1454, 1529
AvaII	GGWCC	4 cut(s)	218, 587, 661, 1778
AvrII	CCTAGG	1 cut(s)	944
BaeGI	GKGCMC	2 cut(s)	57, 1863
BalI	TGGCCA	2 cut(s)	765, 1508
BamHI	GGATCC	1 cut(s)	1413
BanI	GGYRCC	2 cut(s)	54, 1375
BanII	GRGCYC	5 cut(s)	87, 1112, 1130, 1461, 1853
BauI	CACGAG	1 cut(s)	759
BbsI	GAAGAC	2 cut(s)	2087, 2121
Bbv12I	GWGCWC	4 cut(s)	643, 1283, 1461, 1853
BbvI	GCAGC	3 cut(s)	397, 1131, 1720
BccI	CCATC	4 cut(s)	30, 208, 245, 2040
BceAI	ACGGC	2 cut(s)	222, 999
BciT130I	CCWGG	3 cut(s)	626, 1248, 1373
BciVI	GTATCC	1 cut(s)	1919
BclI	TGATCA	2 cut(s)	1080, 1093
BcnI	CCSGG	1 cut(s)	262
BcoDI	GTCTC	9 cut(s)	29, 389, 565, 954, 1400, 1646, 1816, 1984, 2114
BcuI	ACTAGT	2 cut(s)	635, 1067
BfaI	CTAG	6 cut(s)	324, 636, 755, 945, 1068, 1695
BfmI	CTRYAG	1 cut(s)	1734
BfoI	RGCGCY	2 cut(s)	553, 1636
BfuAI	ACCTGC	2 cut(s)	598, 1736
BfuI	GTATCC	1 cut(s)	1919
BglII	AGATCT	1 cut(s)	1213
BisI	GCNGC	7 cut(s)	411, 553, 1052, 1120, 1426, 1734, 1884
BlnI	CCTAGG	1 cut(s)	944
BlsI	GCNGC	7 cut(s)	412, 554, 1053, 1121, 1427, 1735, 1885
Bme1390I	CCNGG	4 cut(s)	262, 626, 1248, 1373
Bme18I	GGWCC	4 cut(s)	218, 587, 661, 1778
BmeRI	GACNNNNNGTC	1 cut(s)	827
BmeT110I	CYCGRG	4 cut(s)	86, 1403, 1454, 1529
BmgBI	CACGTC	2 cut(s)	796, 964
BmgT120I	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1778
BmiI	GGNNCC	8 cut(s)	56, 219, 220, 229, 429, 1109, 1377, 1415
BmrFI	CCNGG	4 cut(s)	262, 626, 1248, 1373
BmrI	ACTGGG	1 cut(s)	216
BmsI	GCATC	5 cut(s)	210, 1212, 1250, 1554, 1597
BmtI	GCTAGC	1 cut(s)	1698
BmuI	ACTGGG	1 cut(s)	216
BpiI	GAAGAC	2 cut(s)	2087, 2121
BpmI	CTGGAG	1 cut(s)	561
BpuEI	CTTGAG	4 cut(s)	1019, 1202, 1453, 1524
BpuMI	CCSGG	1 cut(s)	262
Bsa29I	ATCGAT	1 cut(s)	45
BsaAI	YACGTR	1 cut(s)	926
BsaBI	GATNNNNATC	2 cut(s)	1092, 1344
BsaI	GGTCTC	2 cut(s)	1646, 2114
BsaJI	CCNNGG	7 cut(s)	26, 192, 300, 944, 1015, 1246, 1774
BsaWI	WCCGGW	1 cut(s)	57
BsaXI	ACNNNNNCTCC	8 cut(s)	579, 609, 979, 1009, 1661, 1691, 1964, 1994
Bsc4I	CCNNNNNNNGG	7 cut(s)	306, 620, 1007, 1372, 1410, 2003, 2131
Bse118I	RCCGGY	1 cut(s)	430
Bse1I	ACTGG	3 cut(s)	82, 222, 2077
Bse3DI	GCAATG	2 cut(s)	669, 1890
Bse8I	GATNNNNATC	2 cut(s)	1092, 1344
BseBI	CCWGG	3 cut(s)	626, 1248, 1373
BseCI	ATCGAT	1 cut(s)	45
BseDI	CCNNGG	7 cut(s)	26, 192, 300, 944, 1015, 1246, 1774
BseGI	GGATG	7 cut(s)	22, 256, 367, 1241, 1598, 1623, 1974
BseJI	GATNNNNATC	2 cut(s)	1092, 1344
BseLI	CCNNNNNNNGG	7 cut(s)	306, 620, 1007, 1372, 1410, 2003, 2131
BseMI	GCAATG	2 cut(s)	669, 1890
BseMII	CTCAG	4 cut(s)	435, 906, 1573, 1866
BseNI	ACTGG	3 cut(s)	82, 222, 2077
BseRI	GAGGAG	7 cut(s)	546, 558, 587, 1120, 1669, 1808, 2127
BseSI	GKGCMC	2 cut(s)	57, 1863
BseX3I	CGGCCG	1 cut(s)	811
BseXI	GCAGC	3 cut(s)	397, 1131, 1720
BseYI	CCCAGC	1 cut(s)	1154
Bsh1236I	CGCG	3 cut(s)	33, 1650, 1776
Bsh1285I	CGRYCG	1 cut(s)	814
BshFI	GGCC	8 cut(s)	230, 430, 624, 765, 813, 1014, 1032, 1508
BshNI	GGYRCC	2 cut(s)	54, 1375
BshVI	ATCGAT	1 cut(s)	45
BsiEI	CGRYCG	1 cut(s)	814
BsiHKAI	GWGCWC	4 cut(s)	643, 1283, 1461, 1853
BsiHKCI	CYCGRG	4 cut(s)	86, 1403, 1454, 1529
BsiSI	CCGG	4 cut(s)	58, 231, 261, 431
BslFI	GGGAC	3 cut(s)	204, 834, 1598
BslI	CCNNNNNNNGG	7 cut(s)	306, 620, 1007, 1372, 1410, 2003, 2131
BsmAI	GTCTC	9 cut(s)	29, 389, 565, 954, 1400, 1646, 1816, 1984, 2114
BsmBI	CGTCTC	2 cut(s)	954, 1984
BsmFI	GGGAC	3 cut(s)	204, 834, 1598
BsnI	GGCC	8 cut(s)	230, 430, 624, 765, 813, 1014, 1032, 1508
Bso31I	GGTCTC	2 cut(s)	1646, 2114
BsoBI	CYCGRG	4 cut(s)	86, 1403, 1454, 1529
Bsp1286I	GDGCHC	9 cut(s)	57, 87, 643, 1112, 1130, 1283, 1461, 1853, 1863
Bsp68I	TCGCGA	1 cut(s)	1650
BspANI	GGCC	8 cut(s)	230, 430, 624, 765, 813, 1014, 1032, 1508
BspCNI	CTCAG	4 cut(s)	436, 907, 1572, 1865
BspDI	ATCGAT	1 cut(s)	45
BspFNI	CGCG	3 cut(s)	33, 1650, 1776
BspLI	GGNNCC	8 cut(s)	56, 219, 220, 229, 429, 1109, 1377, 1415
BspMAI	CTGCAG	1 cut(s)	1738
BspMI	ACCTGC	2 cut(s)	598, 1736
BspOI	GCTAGC	1 cut(s)	1698
BspPI	GGATC	5 cut(s)	688, 1340, 1408, 1421, 2195
BspQI	GCTCTTC	1 cut(s)	1466
BspT107I	GGYRCC	2 cut(s)	54, 1375
BspTNI	GGTCTC	2 cut(s)	1646, 2114
BsrBI	CCGCTC	1 cut(s)	1658
BsrDI	GCAATG	2 cut(s)	669, 1890
BsrFI	RCCGGY	1 cut(s)	430
BsrI	ACTGG	3 cut(s)	82, 222, 2077
BssAI	RCCGGY	1 cut(s)	430
BssECI	CCNNGG	7 cut(s)	26, 192, 300, 944, 1015, 1246, 1774
BssSI	CACGAG	1 cut(s)	759
BssT1I	CCWWGG	3 cut(s)	192, 300, 944
Bst2BI	CACGAG	1 cut(s)	759
Bst2UI	CCWGG	3 cut(s)	626, 1248, 1373
Bst6I	CTCTTC	6 cut(s)	605, 834, 1363, 1466, 1592, 1913
BstAPI	GCANNNNNTGC	1 cut(s)	1892
BstBAI	YACGTR	1 cut(s)	926
BstC8I	GCNNGC	5 cut(s)	66, 83, 676, 767, 1696
BstDEI	CTNAG	4 cut(s)	444, 915, 1559, 1852
BstDSI	CCRYGG	2 cut(s)	1015, 1774
BstEII	GGTNACC	1 cut(s)	783
BstF5I	GGATG	7 cut(s)	22, 256, 367, 1241, 1598, 1623, 1974
BstFNI	CGCG	3 cut(s)	33, 1650, 1776
BstH2I	RGCGCY	2 cut(s)	553, 1636
BstHHI	GCGC	4 cut(s)	33, 552, 1425, 1635
BstMAI	GTCTC	9 cut(s)	29, 389, 565, 954, 1400, 1646, 1816, 1984, 2114
BstMCI	CGRYCG	1 cut(s)	814
BstNI	CCWGG	3 cut(s)	626, 1248, 1373
BstNSI	RCATGY	1 cut(s)	1079
BstPI	GGTNACC	1 cut(s)	783
BstSCI	CCNGG	4 cut(s)	260, 624, 1246, 1371
BstSFI	CTRYAG	1 cut(s)	1734
BstSLI	GKGCMC	2 cut(s)	57, 1863
BstUI	CGCG	3 cut(s)	33, 1650, 1776
BstV1I	GCAGC	3 cut(s)	397, 1131, 1720
BstV2I	GAAGAC	2 cut(s)	2087, 2121
BstX2I	RGATCY	3 cut(s)	1213, 1413, 2187
BstYI	RGATCY	3 cut(s)	1213, 1413, 2187
BstZI	CGGCCG	1 cut(s)	811
Bsu15I	ATCGAT	1 cut(s)	45
BsuI	GTATCC	1 cut(s)	1919
BsuRI	GGCC	8 cut(s)	230, 430, 624, 765, 813, 1014, 1032, 1508
BsuTUI	ATCGAT	1 cut(s)	45
BtgI	CCRYGG	2 cut(s)	1015, 1774
BtrI	CACGTC	2 cut(s)	796, 964
BtsCI	GGATG	7 cut(s)	22, 256, 367, 1241, 1598, 1623, 1974
BtsI	GCAGTG	2 cut(s)	1306, 1899
BtsIMutI	CAGTG	7 cut(s)	45, 75, 229, 652, 687, 1306, 1899
BtuMI	TCGCGA	1 cut(s)	1650
BveI	ACCTGC	2 cut(s)	598, 1736
Cac8I	GCNNGC	5 cut(s)	66, 83, 676, 767, 1696
CfoI	GCGC	4 cut(s)	33, 552, 1425, 1635
Cfr10I	RCCGGY	1 cut(s)	430
Cfr13I	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1778
Cfr42I	CCGCGG	1 cut(s)	1777
ClaI	ATCGAT	1 cut(s)	45
Csp6I	GTAC	3 cut(s)	856, 927, 1071
CviQI	GTAC	3 cut(s)	856, 927, 1071
DdeI	CTNAG	4 cut(s)	444, 915, 1559, 1852
DriI	GACNNNNNGTC	1 cut(s)	827
EaeI	YGGCCR	4 cut(s)	763, 811, 1012, 1506
EagI	CGGCCG	1 cut(s)	811
Eam1104I	CTCTTC	6 cut(s)	605, 834, 1363, 1466, 1592, 1913
Eam1105I	GACNNNNNGTC	1 cut(s)	827
EarI	CTCTTC	6 cut(s)	605, 834, 1363, 1466, 1592, 1913
EciI	GGCGGA	1 cut(s)	987
Ecl136II	GAGCTC	2 cut(s)	1459, 1851
EclXI	CGGCCG	1 cut(s)	811
Eco130I	CCWWGG	3 cut(s)	192, 300, 944
Eco147I	AGGCCT	2 cut(s)	624, 1032
Eco24I	GRGCYC	5 cut(s)	87, 1112, 1130, 1461, 1853
Eco31I	GGTCTC	2 cut(s)	1646, 2114
Eco47I	GGWCC	4 cut(s)	218, 587, 661, 1778
Eco47III	AGCGCT	1 cut(s)	1634
Eco52I	CGGCCG	1 cut(s)	811
Eco53kI	GAGCTC	2 cut(s)	1459, 1851
Eco57I	CTGAAG	2 cut(s)	167, 327
Eco88I	CYCGRG	4 cut(s)	86, 1403, 1454, 1529
Eco91I	GGTNACC	1 cut(s)	783
EcoICRI	GAGCTC	2 cut(s)	1459, 1851
EcoO109I	RGGNCCY	1 cut(s)	218
EcoO65I	GGTNACC	1 cut(s)	783
EcoRII	CCWGG	3 cut(s)	624, 1246, 1371
EcoT14I	CCWWGG	3 cut(s)	192, 300, 944
EcoT38I	GRGCYC	5 cut(s)	87, 1112, 1130, 1461, 1853
ErhI	CCWWGG	3 cut(s)	192, 300, 944
Esp3I	CGTCTC	2 cut(s)	954, 1984
FaqI	GGGAC	3 cut(s)	204, 834, 1598
FauI	CCCGC	4 cut(s)	73, 74, 1533, 1624
FauNDI	CATATG	2 cut(s)	744, 1999
FbaI	TGATCA	2 cut(s)	1080, 1093
FblI	GTMKAC	2 cut(s)	159, 239
Fnu4HI	GCNGC	7 cut(s)	411, 553, 1052, 1120, 1426, 1734, 1884
FokI	GGATG	7 cut(s)	9, 263, 374, 1228, 1585, 1610, 1981
FriOI	GRGCYC	5 cut(s)	87, 1112, 1130, 1461, 1853
Fsp4HI	GCNGC	7 cut(s)	411, 553, 1052, 1120, 1426, 1734, 1884
FspBI	CTAG	6 cut(s)	324, 636, 755, 945, 1068, 1695
GlaI	GCGC	4 cut(s)	32, 551, 1424, 1634
GluI	GCNGC	7 cut(s)	411, 553, 1052, 1120, 1426, 1734, 1884
GsaI	CCCAGC	1 cut(s)	1158
GsuI	CTGGAG	1 cut(s)	561
HaeII	RGCGCY	2 cut(s)	553, 1636
HaeIII	GGCC	8 cut(s)	230, 430, 624, 765, 813, 1014, 1032, 1508
HapII	CCGG	4 cut(s)	58, 231, 261, 431
HhaI	GCGC	4 cut(s)	33, 552, 1425, 1635
Hin6I	GCGC	4 cut(s)	31, 550, 1423, 1633
HinP1I	GCGC	4 cut(s)	31, 550, 1423, 1633
HincII	GTYRAC	2 cut(s)	240, 574
HindII	GTYRAC	2 cut(s)	240, 574
HindIII	AAGCTT	1 cut(s)	128
HpaII	CCGG	4 cut(s)	58, 231, 261, 431
HphI	GGTGA	7 cut(s)	124, 527, 691, 698, 777, 1540, 1567
Hpy166II	GTNNAC	8 cut(s)	160, 240, 574, 664, 832, 1073, 1191, 1741
Hpy188I	TCNGA	6 cut(s)	501, 892, 1278, 1332, 2028, 2045
Hpy8I	GTNNAC	8 cut(s)	160, 240, 574, 664, 832, 1073, 1191, 1741
Hpy99I	CGWCG	2 cut(s)	244, 611
HpyAV	CCTTC	4 cut(s)	304, 1405, 1630, 1997
HpyCH4IV	ACGT	5 cut(s)	242, 795, 925, 963, 1977
HpyCH4V	TGCA	9 cut(s)	188, 201, 358, 674, 923, 1063, 1225, 1241, 1736
HpyF3I	CTNAG	4 cut(s)	444, 915, 1559, 1852
HpySE526I	ACGT	5 cut(s)	242, 795, 925, 963, 1977
HspAI	GCGC	4 cut(s)	31, 550, 1423, 1633
KflI	GGGWCCC	1 cut(s)	218
Ksp22I	TGATCA	2 cut(s)	1080, 1093
KspI	CCGCGG	1 cut(s)	1777
LguI	GCTCTTC	1 cut(s)	1466
LmnI	GCTCC	4 cut(s)	171, 1107, 1731, 1776
Lsp1109I	GCAGC	3 cut(s)	397, 1131, 1720
LweI	GCATC	5 cut(s)	210, 1212, 1250, 1554, 1597
MaeI	CTAG	6 cut(s)	324, 636, 755, 945, 1068, 1695
MaeII	ACGT	5 cut(s)	242, 795, 925, 963, 1977
MaeIII	GTNAC	6 cut(s)	112, 433, 783, 798, 1301, 1877
MbiI	CCGCTC	1 cut(s)	1658
MfeI	CAATTG	2 cut(s)	728, 849
MflI	RGATCY	3 cut(s)	1213, 1413, 2187
MhlI	GDGCHC	9 cut(s)	57, 87, 643, 1112, 1130, 1283, 1461, 1853, 1863
MlsI	TGGCCA	2 cut(s)	765, 1508
MluCI	AATT	6 cut(s)	330, 728, 849, 1255, 1382, 2082
MluNI	TGGCCA	2 cut(s)	765, 1508
MlyI	GAGTC	6 cut(s)	328, 567, 623, 853, 909, 1176
MmeI	TCCRAC	3 cut(s)	1016, 1626, 2150
Mox20I	TGGCCA	2 cut(s)	765, 1508
MscI	TGGCCA	2 cut(s)	765, 1508
MseI	TTAA	4 cut(s)	285, 333, 1502, 1766
MslI	CAYNNNNRTG	2 cut(s)	209, 1299
Msp20I	TGGCCA	2 cut(s)	765, 1508
MspA1I	CMGCKG	1 cut(s)	1776
MspI	CCGG	4 cut(s)	58, 231, 261, 431
MspR9I	CCNGG	4 cut(s)	262, 626, 1248, 1373
MunI	CAATTG	2 cut(s)	728, 849
MvaI	CCWGG	3 cut(s)	626, 1248, 1373
MvnI	CGCG	3 cut(s)	33, 1650, 1776
NciI	CCSGG	1 cut(s)	262
NdeI	CATATG	2 cut(s)	744, 1999
NheI	GCTAGC	1 cut(s)	1694
NlaIV	GGNNCC	8 cut(s)	56, 219, 220, 229, 429, 1109, 1377, 1415
NmeAIII	GCCGAG	4 cut(s)	7, 462, 581, 789
NmuCI	GTSAC	5 cut(s)	112, 433, 783, 798, 1301
NruI	TCGCGA	1 cut(s)	1650
NspI	RCATGY	1 cut(s)	1079
OliI	CACNNNNGTG	2 cut(s)	209, 1299
PaeR7I	CTCGAG	1 cut(s)	86
PceI	AGGCCT	2 cut(s)	624, 1032
PciI	ACATGT	1 cut(s)	1075
PciSI	GCTCTTC	1 cut(s)	1466
PfeI	GAWTC	4 cut(s)	472, 723, 2017, 2211
PflFI	GACNNNGTC	1 cut(s)	2125
PflMI	CCANNNNNTGG	1 cut(s)	1372
PkrI	GCNGC	7 cut(s)	412, 554, 1053, 1121, 1427, 1735, 1885
PleI	GAGTC	6 cut(s)	327, 566, 623, 852, 908, 1175
PpsI	GAGTC	6 cut(s)	327, 566, 623, 852, 908, 1175
Ppu21I	YACGTR	1 cut(s)	926
PpuMI	RGGWCCY	1 cut(s)	218
PscI	ACATGT	1 cut(s)	1075
Psp124BI	GAGCTC	2 cut(s)	1461, 1853
Psp5II	RGGWCCY	1 cut(s)	218
Psp6I	CCWGG	3 cut(s)	624, 1246, 1371
PspEI	GGTNACC	1 cut(s)	783
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	3 cut(s)	624, 1246, 1371
PspN4I	GGNNCC	8 cut(s)	56, 219, 220, 229, 429, 1109, 1377, 1415
PspPI	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1778
PspPPI	RGGWCCY	1 cut(s)	218
PspXI	VCTCGAGB	1 cut(s)	86
PstI	CTGCAG	1 cut(s)	1738
PsuI	RGATCY	3 cut(s)	1213, 1413, 2187
PsyI	GACNNNGTC	1 cut(s)	2125
RruI	TCGCGA	1 cut(s)	1650
RsaI	GTAC	3 cut(s)	857, 928, 1072
RsaNI	GTAC	3 cut(s)	856, 927, 1071
RseI	CAYNNNNRTG	2 cut(s)	209, 1299
SacI	GAGCTC	2 cut(s)	1461, 1853
SacII	CCGCGG	1 cut(s)	1777
SalI	GTCGAC	1 cut(s)	238
SapI	GCTCTTC	1 cut(s)	1466
SaqAI	TTAA	4 cut(s)	285, 333, 1502, 1766
SatI	GCNGC	7 cut(s)	411, 553, 1052, 1120, 1426, 1734, 1884
Sau96I	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1778
SchI	GAGTC	6 cut(s)	328, 567, 623, 853, 909, 1176
ScrFI	CCNGG	4 cut(s)	262, 626, 1248, 1373
SduI	GDGCHC	9 cut(s)	57, 87, 643, 1112, 1130, 1283, 1461, 1853, 1863
SfaNI	GCATC	5 cut(s)	210, 1212, 1250, 1554, 1597
SfcI	CTRYAG	1 cut(s)	1734
Sfr274I	CTCGAG	1 cut(s)	86
Sfr303I	CCGCGG	1 cut(s)	1777
SgrBI	CCGCGG	1 cut(s)	1777
SinI	GGWCC	4 cut(s)	218, 587, 661, 1778
SlaI	CTCGAG	1 cut(s)	86
SmiMI	CAYNNNNRTG	2 cut(s)	209, 1299
SmlI	CTYRAG	5 cut(s)	86, 1034, 1217, 1468, 1539
SmoI	CTYRAG	5 cut(s)	86, 1034, 1217, 1468, 1539
SpeI	ACTAGT	2 cut(s)	635, 1067
Sse9I	AATT	6 cut(s)	330, 728, 849, 1255, 1382, 2082
SseBI	AGGCCT	2 cut(s)	624, 1032
SspI	AATATT	1 cut(s)	1958
SspMI	CTAG	6 cut(s)	324, 636, 755, 945, 1068, 1695
SstI	GAGCTC	2 cut(s)	1461, 1853
StuI	AGGCCT	2 cut(s)	624, 1032
StyD4I	CCNGG	4 cut(s)	260, 624, 1246, 1371
StyI	CCWWGG	3 cut(s)	192, 300, 944
TaiI	ACGT	5 cut(s)	245, 798, 928, 966, 1980
TasI	AATT	6 cut(s)	330, 728, 849, 1255, 1382, 2082
TatI	WGTACW	1 cut(s)	1070
TauI	GCSGC	4 cut(s)	555, 1054, 1428, 1886
TfiI	GAWTC	4 cut(s)	472, 723, 2017, 2211
Tru1I	TTAA	4 cut(s)	285, 333, 1502, 1766
Tru9I	TTAA	4 cut(s)	285, 333, 1502, 1766
TscAI	CASTG	7 cut(s)	45, 82, 229, 652, 694, 1306, 1906
TseFI	GTSAC	5 cut(s)	112, 433, 783, 798, 1301
TseI	GCWGC	3 cut(s)	410, 1119, 1733
Tsp45I	GTSAC	5 cut(s)	112, 433, 783, 798, 1301
TspGWI	ACGGA	1 cut(s)	600
TspRI	CASTG	7 cut(s)	45, 82, 229, 652, 694, 1306, 1906
Tth111I	GACNNNGTC	1 cut(s)	2125
Van91I	CCANNNNNTGG	1 cut(s)	1372
VpaK11BI	GGWCC	4 cut(s)	218, 587, 661, 1778
XapI	RAATTY	2 cut(s)	1382, 2082
XceI	RCATGY	1 cut(s)	1079
XcmI	CCANNNNNNNNNTGG	2 cut(s)	893, 1870
XhoI	CTCGAG	1 cut(s)	86
XmaJI	CCTAGG	1 cut(s)	944
XmiI	GTMKAC	2 cut(s)	159, 239
XspI	CTAG	6 cut(s)	324, 636, 755, 945, 1068, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.