Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0015635

Physical Location & Seq

Genomic Coordinates Forward (+)

30484380 .. 30487710

Gene Structure 3331 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1306900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGCTCGTAGTACTAGTCGCCGGCGTGACACAGTGATAGACATTGGGAAGCCGTCGAGCTTCACAGGGGGGCTTGAGTTTTCCACCCTAACGTACACGGTGACAAAGAAAACCAAAGATGAGGAGGGAAAATGGATGACGCAAGAAGTGGACTTGTTGCACAAGATCACGGGGTTTGCACCAAAAGGGTCTATCACAGCCGTGATGGGTCCTAGTGGTGCCGGGAAGTCTACGTTCTTGGATGGACTGGCAGGGAGGATAGCAAGTGGGAGTCTTAAGGGAAGAGTGTCCTTGGATGGCAAGGAAATGAGTCTCAGCTTGATTAAAAGGACTTCAGCCTATATTATGCAGGATGATAGGCTTTTTCCAACTCTTACAGTTTATGAGACCTTGATGTTTGCTGCTGATTTCAGGTTGGGACCGGTTTCAAGTGCTGATAAGAAGCAGCGAGTCGAAAAGCTGATTCAACAGCTTGGATTAACTTCTGCCAGAAACACGTTCATAGGTGATGAGGGAACCCGAGGAGTGTCTGGTGGTGAGCGTCGGAGAGTTTCAATTGGAGTGGACATCATTCATGGACCATCACTCCTCTTCCTTGATGAACCCACTTCTGGTCTAGACTCCACCAGTGCTCACAGTGTCATCGAAAAGGTGCACCACATTGCACGCTCTGGAAGCACTGTAATTCTCACCGTTCACCAACCCTCGTCCAGAATTCAATTGCTTCTCGACCATCTGATCATTCTAGCTCGAGGGCAGCTCATGTACCAAGGATCACCAAAAGATGTGGATCTCCATCTTGGTCGAATGGGGCGCAAAGTTCACAAGGAAGAGAGCCCTATTGAGTACCTCATTGATGTGATTCAGCAATATGATCAGTCTGAACTCGGGGTCGAGGCACTAGCCGAATTTGCACGTACTGGAATGAGACCCCCGCTGTTAGTTGATGTGGATGCCTCACCTTCGACAGTTATGCCAACACCACTGCGCCATGGCGGACGTGGAGGTGAAGGCCTGGAGGACAAGGGAAAGTCTGGAAAACGCCTGCACTTACAAACTAGTATACATTCAGTCAATGATTTTGATCACAGTGTGAGAAGCCCTTACAACAATAGTAATTCAAGGTCATGGACTCCCAGCCATAGTGGGGTCATGCAAAAACTGCAGATGTTTACCCCTTCACGGCAACGAGAAGGCCAAAAGATGCAAAGCCCCATGAGTGCATCCCCAGGCTACAACTATTCAAGTGAGATTCTTCCAAGCACACCAACGCCCCATAGCAGTGACTACACAGTGAATGAAAATGACTATCTGACCCCGGATATTGGTCCTAACACCAATTCATACCACCACCTTGGCCCCAAATTCGCCAACTCATTCTTCCCTGAGACTTGGATTCTCATGAGGCGTAACTTCATCAACATCAGGCGCACACCCGAGCTTTTCCTCTCAAGACTAGTAGTCCTCACATTCATGGGCTTCTTAATGGCCACCATGTTCCTAAAGCCACCAGAAACCACTCAAGGCATCACCAACCGCCTCAGTTTCTTCATCTTCACTGTCTGCCTCTTCTTCTTCTCATCAAATGATGCTGTCCCAGCCTTCATCCAGGAGCGCTTCATCTTCATCCGCGAGACTGCCCACAATGCCTACAGAGCCTCTTCATACACAATTGCTGGCCTAGTAACATACCTCCCCTTTCTTGCATTGCAAGCATCTGTTTACGCTGGCATTGTTTGGTTTGCCTTGGGGCTTAGAGAGCCCTTCATATACTTCTTGGTGGTTCTCTATGTTTCTCTCCTCTCAACCAATTCATTTGTGGTGTTTGTGAGCTCAGTTGTGCCCAATTACATCTTGGGATATGCAGCAGTCATTGCCTTCACTGCCTTGTTCTTCTTGTTCTGTGGCTACTTCTTGAATAGCCACGACATCCCTGGCTATTGGTCCTGGATGAACAAAGTCTCCACCATGACATATCCATATGAAGGACTTATAATGAATCAGTACCAAACTAGCGATACTTTCGGAAAAAACCCTGACGGGACCAACATAACCGGTTTCAACATCTTAGAAGGTCTTCGCATAGATTACGGCGGAGAACACACTCTCTCTGAAGTGAAGAAGTGGGAGAAGGTGTACATAATGTTGGGCATGACTGTTTTATACAGGGTTTTGTTTTACTTAGTCATTCGTTTCACGTCCAAGAACCAGAGGACGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043492 GO:0044085 GO:0044425 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

740

Amino Acids

82.65

Weight (kDa)

9.11

Isoelectric Point (pI)

41.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	56 - 204	4.3e-26	ABC transporter
ABC2_membrane	PF01061	463 - 669	6.3e-40	ABC-2 type transporter
ABC2_membrane_3	PF12698	504 - 726	1e-05	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015635)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g29080
malus_domestica	MD01G1044600.v1.1 MD15G1306900.v1.1
prunus_persica	Prupe.6G208600_v2.0.a1
pyrus_communis	pycom15g27090
rosa_chinensis	RchiOBHm_Chr7g0221691
rosa_laevigata	RLG00000002137 RLG00000002338
rosa_multiflora	Rmu_sc0002824.1_g000008
rosa_roxburghii	Rroxscaffold_3G00238110
rosa_rugosa	Rorug07G0203000
rosa_samantha	Rh7AG343700 Rh7BG333800 Rh7CG361100 Rh7DG341400
rosa_wichuraiana	Rw7G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1994
AccB1I	GGYRCC	1 cut(s)	218
AccI	GTMKAC	2 cut(s)	230, 1063
AccII	CGCG	1 cut(s)	1632
AciI	CCGC	5 cut(s)	935, 996, 1537, 1630, 2094
AclWI	GGATC	2 cut(s)	781, 798
AcoI	YGGCCR	1 cut(s)	1488
AcsI	RAATTY	3 cut(s)	714, 908, 1364
AcuI	CTGAAG	2 cut(s)	318, 2133
AdeI	CACNNNGTG	1 cut(s)	1093
AfaI	GTAC	7 cut(s)	13, 95, 767, 848, 919, 2006, 2138
AfeI	AGCGCT	1 cut(s)	1616
AfiI	CCNNNNNNNGG	5 cut(s)	611, 1147, 1182, 1325, 1985
AflII	CTTAAG	1 cut(s)	275
AflIII	ACRYGT	1 cut(s)	495
AgeI	ACCGGT	2 cut(s)	421, 2054
AgsI	TTSAA	8 cut(s)	429, 467, 555, 719, 1122, 1245, 1918, 2062
AhdI	GACNNNNNGTC	1 cut(s)	1460
AhlI	ACTAGT	3 cut(s)	14, 1058, 1456
AjiI	CACGTC	2 cut(s)	1001, 2199
AjnI	CCWGG	5 cut(s)	1014, 1228, 1608, 1933, 1946
AjuI	GAANNNNNNNTTGG	2 cut(s)	1364, 1396
AleI	CACNNNNGTG	1 cut(s)	200
AloI	GAACNNNNNNTCC	2 cut(s)	1946, 1978
AluBI	AGCT	8 cut(s)	60, 318, 460, 472, 749, 760, 1441, 1833
AluI	AGCT	8 cut(s)	60, 318, 460, 472, 749, 760, 1441, 1833
Alw21I	GWGCWC	3 cut(s)	634, 657, 1835
Alw26I	GTCTC	6 cut(s)	317, 380, 922, 1382, 1628, 1966
Alw44I	GTGCAC	1 cut(s)	653
AlwI	GGATC	2 cut(s)	781, 798
Ama87I	CYCGRG	4 cut(s)	519, 750, 887, 1436
Aor51HI	AGCGCT	1 cut(s)	1616
AoxI	GGCC	5 cut(s)	1012, 1195, 1357, 1488, 1678
ApaLI	GTGCAC	1 cut(s)	653
ApeKI	GCWGC	4 cut(s)	401, 445, 757, 1865
ApoI	RAATTY	3 cut(s)	714, 908, 1364
AsiGI	ACCGGT	2 cut(s)	421, 2054
Asp700I	GAANNNNTTC	1 cut(s)	2076
AspLEI	GCGC	4 cut(s)	816, 990, 1431, 1617
AspS9I	GGNCC	7 cut(s)	209, 419, 578, 1328, 1358, 1944, 2043
AsuC2I	CCSGG	2 cut(s)	223, 1319
AsuHPI	GGTGA	9 cut(s)	112, 518, 548, 682, 689, 768, 951, 1019, 1522
AvaI	CYCGRG	4 cut(s)	519, 750, 887, 1436
AvaII	GGWCC	6 cut(s)	209, 419, 578, 1328, 1944, 2043
BaeGI	GKGCMC	2 cut(s)	657, 1845
BalI	TGGCCA	1 cut(s)	1490
BanI	GGYRCC	1 cut(s)	218
BanII	GRGCYC	3 cut(s)	839, 1764, 1835
BbsI	GAAGAC	1 cut(s)	2069
Bbv12I	GWGCWC	3 cut(s)	634, 657, 1835
BbvI	GCAGC	4 cut(s)	388, 457, 769, 1877
BccI	CCATC	6 cut(s)	199, 236, 290, 589, 741, 804
BceAI	ACGGC	4 cut(s)	37, 185, 1199, 2107
BcgI	CGANNNNNNTGC	2 cut(s)	955, 989
BciT130I	CCWGG	5 cut(s)	1016, 1230, 1610, 1935, 1948
BclI	TGATCA	3 cut(s)	738, 874, 1084
BcnI	CCSGG	2 cut(s)	223, 1319
BcoDI	GTCTC	6 cut(s)	317, 380, 922, 1382, 1628, 1966
BcuI	ACTAGT	3 cut(s)	14, 1058, 1456
BfaI	CTAG	9 cut(s)	15, 213, 617, 746, 902, 1059, 1457, 1682, 2013
BfmI	CTRYAG	2 cut(s)	1163, 1651
BfoI	RGCGCY	1 cut(s)	1618
BfrI	CTTAAG	1 cut(s)	275
BisI	GCNGC	4 cut(s)	402, 446, 758, 1866
BlsI	GCNGC	4 cut(s)	403, 447, 759, 1867
BmcAI	AGTACT	1 cut(s)	13
Bme1390I	CCNGG	7 cut(s)	223, 1016, 1230, 1319, 1610, 1935, 1948
Bme18I	GGWCC	6 cut(s)	209, 419, 578, 1328, 1944, 2043
BmeRI	GACNNNNNGTC	1 cut(s)	1460
BmeT110I	CYCGRG	4 cut(s)	519, 750, 887, 1436
BmgBI	CACGTC	2 cut(s)	1001, 2199
BmgT120I	GGNCC	7 cut(s)	209, 419, 578, 1328, 1358, 1944, 2043
BmiI	GGNNCC	6 cut(s)	210, 220, 420, 517, 1360, 2044
BmrFI	CCNGG	7 cut(s)	223, 1016, 1230, 1319, 1610, 1935, 1948
BmsI	GCATC	6 cut(s)	943, 1194, 1232, 1536, 1579, 1724
BpiI	GAAGAC	1 cut(s)	2069
BplI	GAGNNNNNCTC	2 cut(s)	744, 776
BpmI	CTGGAG	1 cut(s)	1037
BpuEI	CTTGAG	3 cut(s)	95, 1435, 1506
BpuMI	CCSGG	2 cut(s)	223, 1319
BsaAI	YACGTR	1 cut(s)	917
BsaBI	GATNNNNATC	3 cut(s)	789, 795, 1083
BsaI	GGTCTC	2 cut(s)	380, 922
BsaJI	CCNNGG	9 cut(s)	291, 520, 769, 991, 1228, 1317, 1354, 1746, 1933
BsaWI	WCCGGW	2 cut(s)	421, 2054
BsaXI	ACNNNNNCTCC	6 cut(s)	570, 600, 1946, 1976, 2120, 2150
Bsc4I	CCNNNNNNNGG	5 cut(s)	611, 1147, 1182, 1325, 1985
Bse118I	RCCGGY	3 cut(s)	21, 421, 2054
Bse1I	ACTGG	3 cut(s)	252, 627, 925
Bse3DI	GCAATG	3 cut(s)	660, 1706, 1872
Bse8I	GATNNNNATC	3 cut(s)	789, 795, 1083
BseBI	CCWGG	5 cut(s)	1016, 1230, 1610, 1935, 1948
BseDI	CCNNGG	9 cut(s)	291, 520, 769, 991, 1228, 1317, 1354, 1746, 1933
BseJI	GATNNNNATC	3 cut(s)	789, 795, 1083
BseLI	CCNNNNNNNGG	5 cut(s)	611, 1147, 1182, 1325, 1985
BseMI	GCAATG	3 cut(s)	660, 1706, 1872
BseMII	CTCAG	4 cut(s)	328, 1377, 1555, 1848
BseNI	ACTGG	3 cut(s)	252, 627, 925
BseRI	GAGGAG	4 cut(s)	137, 537, 578, 1790
BseSI	GKGCMC	2 cut(s)	657, 1845
BseXI	GCAGC	4 cut(s)	388, 457, 769, 1877
BseYI	CCCAGC	2 cut(s)	1136, 1597
BsgI	GTGCAG	1 cut(s)	1031
Bsh1236I	CGCG	1 cut(s)	1632
BshFI	GGCC	5 cut(s)	1014, 1197, 1359, 1490, 1680
BshNI	GGYRCC	1 cut(s)	218
BshTI	ACCGGT	2 cut(s)	421, 2054
BsiHKAI	GWGCWC	3 cut(s)	634, 657, 1835
BsiHKCI	CYCGRG	4 cut(s)	519, 750, 887, 1436
BsiSI	CCGG	5 cut(s)	22, 222, 422, 1319, 2055
BslFI	GGGAC	3 cut(s)	432, 1580, 2056
BslI	CCNNNNNNNGG	5 cut(s)	611, 1147, 1182, 1325, 1985
BsmAI	GTCTC	6 cut(s)	317, 380, 922, 1382, 1628, 1966
BsmFI	GGGAC	3 cut(s)	432, 1580, 2056
BsnI	GGCC	5 cut(s)	1014, 1197, 1359, 1490, 1680
Bso31I	GGTCTC	2 cut(s)	380, 922
BsoBI	CYCGRG	4 cut(s)	519, 750, 887, 1436
Bsp1286I	GDGCHC	6 cut(s)	634, 657, 839, 1764, 1835, 1845
Bsp1407I	TGTACA	1 cut(s)	2136
Bsp143I	GATC	6 cut(s)	165, 738, 773, 790, 874, 1084
Bsp19I	CCATGG	1 cut(s)	991
BspACI	CCGC	5 cut(s)	935, 996, 1537, 1630, 2094
BspANI	GGCC	5 cut(s)	1014, 1197, 1359, 1490, 1680
BspCNI	CTCAG	4 cut(s)	327, 1378, 1554, 1847
BspFNI	CGCG	1 cut(s)	1632
BspHI	TCATGA	1 cut(s)	1401
BspLI	GGNNCC	6 cut(s)	210, 220, 420, 517, 1360, 2044
BspMAI	CTGCAG	1 cut(s)	1167
BspPI	GGATC	2 cut(s)	781, 798
BspT107I	GGYRCC	1 cut(s)	218
BspTI	CTTAAG	1 cut(s)	275
BspTNI	GGTCTC	2 cut(s)	380, 922
BsrDI	GCAATG	3 cut(s)	660, 1706, 1872
BsrFI	RCCGGY	3 cut(s)	21, 421, 2054
BsrGI	TGTACA	1 cut(s)	2136
BsrI	ACTGG	3 cut(s)	252, 627, 925
BssAI	RCCGGY	3 cut(s)	21, 421, 2054
BssECI	CCNNGG	9 cut(s)	291, 520, 769, 991, 1228, 1317, 1354, 1746, 1933
BssMI	GATC	6 cut(s)	165, 738, 773, 790, 874, 1084
BssNAI	GTATAC	1 cut(s)	1064
BssT1I	CCWWGG	5 cut(s)	291, 769, 991, 1354, 1746
Bst1107I	GTATAC	1 cut(s)	1064
Bst2UI	CCWGG	5 cut(s)	1016, 1230, 1610, 1935, 1948
Bst6I	CTCTTC	5 cut(s)	277, 596, 825, 1574, 1666
BstAFI	CTTAAG	1 cut(s)	275
BstAPI	GCANNNNNTGC	2 cut(s)	1162, 1874
BstAUI	TGTACA	1 cut(s)	2136
BstBAI	YACGTR	1 cut(s)	917
BstC8I	GCNNGC	6 cut(s)	23, 667, 1046, 1678, 1713, 1729
BstDEI	CTNAG	7 cut(s)	314, 1386, 1541, 1754, 1834, 2068, 2182
BstDSI	CCRYGG	1 cut(s)	991
BstFNI	CGCG	1 cut(s)	1632
BstH2I	RGCGCY	1 cut(s)	1618
BstHHI	GCGC	4 cut(s)	816, 990, 1431, 1617
BstKTI	GATC	6 cut(s)	168, 741, 776, 793, 877, 1087
BstMAI	GTCTC	6 cut(s)	317, 380, 922, 1382, 1628, 1966
BstMBI	GATC	6 cut(s)	165, 738, 773, 790, 874, 1084
BstNI	CCWGG	5 cut(s)	1016, 1230, 1610, 1935, 1948
BstSCI	CCNGG	7 cut(s)	221, 1014, 1228, 1317, 1608, 1933, 1946
BstSFI	CTRYAG	2 cut(s)	1163, 1651
BstSLI	GKGCMC	2 cut(s)	657, 1845
BstUI	CGCG	1 cut(s)	1632
BstV1I	GCAGC	4 cut(s)	388, 457, 769, 1877
BstV2I	GAAGAC	1 cut(s)	2069
BstX2I	RGATCY	1 cut(s)	790
BstXI	CCANNNNNNTGG	1 cut(s)	1355
BstYI	RGATCY	1 cut(s)	790
BstZ17I	GTATAC	1 cut(s)	1064
BsuRI	GGCC	5 cut(s)	1014, 1197, 1359, 1490, 1680
BtgI	CCRYGG	1 cut(s)	991
BtrI	CACGTC	2 cut(s)	1001, 2199
BtsI	GCAGTG	3 cut(s)	983, 1288, 1881
Cac8I	GCNNGC	6 cut(s)	23, 667, 1046, 1678, 1713, 1729
CciI	TCATGA	1 cut(s)	1401
CfoI	GCGC	4 cut(s)	816, 990, 1431, 1617
Cfr10I	RCCGGY	3 cut(s)	21, 421, 2054
Cfr13I	GGNCC	7 cut(s)	209, 419, 578, 1328, 1358, 1944, 2043
CseI	GACGC	2 cut(s)	148, 530
Csp6I	GTAC	7 cut(s)	12, 94, 766, 847, 918, 2005, 2137
CspAI	ACCGGT	2 cut(s)	421, 2054
CspCI	CAANNNNNGTGG	4 cut(s)	543, 578, 768, 803
CviQI	GTAC	7 cut(s)	12, 94, 766, 847, 918, 2005, 2137
DdeI	CTNAG	7 cut(s)	314, 1386, 1541, 1754, 1834, 2068, 2182
DpnI	GATC	6 cut(s)	167, 740, 775, 792, 876, 1086
DpnII	GATC	6 cut(s)	165, 738, 773, 790, 874, 1084
DraIII	CACNNNGTG	1 cut(s)	1093
DriI	GACNNNNNGTC	1 cut(s)	1460
EaeI	YGGCCR	1 cut(s)	1488
Eam1104I	CTCTTC	5 cut(s)	277, 596, 825, 1574, 1666
Eam1105I	GACNNNNNGTC	1 cut(s)	1460
EarI	CTCTTC	5 cut(s)	277, 596, 825, 1574, 1666
EciI	GGCGGA	2 cut(s)	1011, 2109
Ecl136II	GAGCTC	1 cut(s)	1833
Eco130I	CCWWGG	5 cut(s)	291, 769, 991, 1354, 1746
Eco147I	AGGCCT	1 cut(s)	1014
Eco24I	GRGCYC	3 cut(s)	839, 1764, 1835
Eco31I	GGTCTC	2 cut(s)	380, 922
Eco47I	GGWCC	6 cut(s)	209, 419, 578, 1328, 1944, 2043
Eco47III	AGCGCT	1 cut(s)	1616
Eco53kI	GAGCTC	1 cut(s)	1833
Eco57I	CTGAAG	2 cut(s)	318, 2133
Eco88I	CYCGRG	4 cut(s)	519, 750, 887, 1436
EcoICRI	GAGCTC	1 cut(s)	1833
EcoO109I	RGGNCCY	1 cut(s)	209
EcoRI	GAATTC	1 cut(s)	714
EcoRII	CCWGG	5 cut(s)	1014, 1228, 1608, 1933, 1946
EcoT14I	CCWWGG	5 cut(s)	291, 769, 991, 1354, 1746
EcoT38I	GRGCYC	3 cut(s)	839, 1764, 1835
ErhI	CCWWGG	5 cut(s)	291, 769, 991, 1354, 1746
FaqI	GGGAC	3 cut(s)	432, 1580, 2056
FauI	CCCGC	1 cut(s)	942
FauNDI	CATATG	1 cut(s)	1981
FbaI	TGATCA	3 cut(s)	738, 874, 1084
FblI	GTMKAC	2 cut(s)	230, 1063
Fnu4HI	GCNGC	4 cut(s)	402, 446, 758, 1866
FriOI	GRGCYC	3 cut(s)	839, 1764, 1835
Fsp4HI	GCNGC	4 cut(s)	402, 446, 758, 1866
FspBI	CTAG	9 cut(s)	15, 213, 617, 746, 902, 1059, 1457, 1682, 2013
GlaI	GCGC	4 cut(s)	815, 989, 1430, 1616
GluI	GCNGC	4 cut(s)	402, 446, 758, 1866
GsaI	CCCAGC	2 cut(s)	1140, 1601
GsuI	CTGGAG	1 cut(s)	1037
HaeII	RGCGCY	1 cut(s)	1618
HaeIII	GGCC	5 cut(s)	1014, 1197, 1359, 1490, 1680
HapII	CCGG	5 cut(s)	22, 222, 422, 1319, 2055
HgaI	GACGC	2 cut(s)	148, 530
HhaI	GCGC	4 cut(s)	816, 990, 1431, 1617
Hin6I	GCGC	4 cut(s)	814, 988, 1429, 1615
HinP1I	GCGC	4 cut(s)	814, 988, 1429, 1615
HpaII	CCGG	5 cut(s)	22, 222, 422, 1319, 2055
HphI	GGTGA	9 cut(s)	112, 518, 548, 682, 689, 768, 951, 1019, 1522
Hpy188I	TCNGA	6 cut(s)	546, 738, 883, 1314, 2027, 2113
Hpy188III	TCNNGA	8 cut(s)	617, 672, 711, 728, 1035, 1402, 1452, 1915
Hpy99I	CGWCG	2 cut(s)	58, 546
HpyCH4IV	ACGT	7 cut(s)	92, 233, 497, 916, 1000, 2198, 2216
HpyF3I	CTNAG	7 cut(s)	314, 1386, 1541, 1754, 1834, 2068, 2182
HpySE526I	ACGT	7 cut(s)	92, 233, 497, 916, 1000, 2198, 2216
HspAI	GCGC	4 cut(s)	814, 988, 1429, 1615
KroI	GCCGGC	1 cut(s)	21
KroNI	GCCGGC	1 cut(s)	23
Ksp22I	TGATCA	3 cut(s)	738, 874, 1084
Kzo9I	GATC	6 cut(s)	165, 738, 773, 790, 874, 1084
LmnI	GCTCC	1 cut(s)	1612
Lsp1109I	GCAGC	4 cut(s)	388, 457, 769, 1877
LweI	GCATC	6 cut(s)	943, 1194, 1232, 1536, 1579, 1724
MaeI	CTAG	9 cut(s)	15, 213, 617, 746, 902, 1059, 1457, 1682, 2013
MaeII	ACGT	7 cut(s)	92, 233, 497, 916, 1000, 2198, 2216
MaeIII	GTNAC	5 cut(s)	26, 100, 1283, 1409, 1684
MalI	GATC	6 cut(s)	167, 740, 775, 792, 876, 1086
MboI	GATC	6 cut(s)	165, 738, 773, 790, 874, 1084
MfeI	CAATTG	3 cut(s)	555, 719, 1671
MflI	RGATCY	1 cut(s)	790
MhlI	GDGCHC	6 cut(s)	634, 657, 839, 1764, 1835, 1845
MlsI	TGGCCA	1 cut(s)	1490
MluNI	TGGCCA	1 cut(s)	1490
MlyI	GAGTC	5 cut(s)	280, 319, 459, 614, 1126
MmeI	TCCRAC	2 cut(s)	392, 524
Mox20I	TGGCCA	1 cut(s)	1490
MreI	CGCCGGCG	1 cut(s)	21
MroNI	GCCGGC	1 cut(s)	21
MroXI	GAANNNNTTC	1 cut(s)	2076
MscI	TGGCCA	1 cut(s)	1490
MseI	TTAA	4 cut(s)	276, 324, 479, 1484
MslI	CAYNNNNRTG	4 cut(s)	200, 857, 1281, 1472
Msp20I	TGGCCA	1 cut(s)	1490
MspA1I	CMGCKG	1 cut(s)	937
MspCI	CTTAAG	1 cut(s)	275
MspI	CCGG	5 cut(s)	22, 222, 422, 1319, 2055
MspR9I	CCNGG	7 cut(s)	223, 1016, 1230, 1319, 1610, 1935, 1948
MunI	CAATTG	3 cut(s)	555, 719, 1671
MvaI	CCWGG	5 cut(s)	1016, 1230, 1610, 1935, 1948
MvnI	CGCG	1 cut(s)	1632
NaeI	GCCGGC	1 cut(s)	23
NciI	CCSGG	2 cut(s)	223, 1319
NcoI	CCATGG	1 cut(s)	991
NdeI	CATATG	1 cut(s)	1981
NdeII	GATC	6 cut(s)	165, 738, 773, 790, 874, 1084
NgoMIV	GCCGGC	1 cut(s)	21
NlaIV	GGNNCC	6 cut(s)	210, 220, 420, 517, 1360, 2044
NmuCI	GTSAC	3 cut(s)	26, 100, 1283
OliI	CACNNNNGTG	1 cut(s)	200
PaeR7I	CTCGAG	1 cut(s)	750
PagI	TCATGA	1 cut(s)	1401
PceI	AGGCCT	1 cut(s)	1014
PdiI	GCCGGC	1 cut(s)	23
PdmI	GAANNNNTTC	1 cut(s)	2076
PfeI	GAWTC	5 cut(s)	463, 862, 1252, 1396, 1999
PfoI	TCCNGGA	2 cut(s)	1608, 1946
PinAI	ACCGGT	2 cut(s)	421, 2054
PkrI	GCNGC	4 cut(s)	403, 447, 759, 1867
PleI	GAGTC	5 cut(s)	279, 318, 458, 614, 1126
PpsI	GAGTC	5 cut(s)	279, 318, 458, 614, 1126
Ppu21I	YACGTR	1 cut(s)	917
PpuMI	RGGWCCY	1 cut(s)	209
PsiI	TTATAA	1 cut(s)	1994
Psp124BI	GAGCTC	1 cut(s)	1835
Psp5II	RGGWCCY	1 cut(s)	209
Psp6I	CCWGG	5 cut(s)	1014, 1228, 1608, 1933, 1946
PspFI	CCCAGC	2 cut(s)	1136, 1597
PspGI	CCWGG	5 cut(s)	1014, 1228, 1608, 1933, 1946
PspN4I	GGNNCC	6 cut(s)	210, 220, 420, 517, 1360, 2044
PspPI	GGNCC	7 cut(s)	209, 419, 578, 1328, 1358, 1944, 2043
PspPPI	RGGWCCY	1 cut(s)	209
PspXI	VCTCGAGB	1 cut(s)	750
PstI	CTGCAG	1 cut(s)	1167
PsuI	RGATCY	1 cut(s)	790
RsaI	GTAC	7 cut(s)	13, 95, 767, 848, 919, 2006, 2138
RsaNI	GTAC	7 cut(s)	12, 94, 766, 847, 918, 2005, 2137
RseI	CAYNNNNRTG	4 cut(s)	200, 857, 1281, 1472
SacI	GAGCTC	1 cut(s)	1835
SaqAI	TTAA	4 cut(s)	276, 324, 479, 1484
SatI	GCNGC	4 cut(s)	402, 446, 758, 1866
Sau3AI	GATC	6 cut(s)	165, 738, 773, 790, 874, 1084
Sau96I	GGNCC	7 cut(s)	209, 419, 578, 1328, 1358, 1944, 2043
ScaI	AGTACT	1 cut(s)	13
SchI	GAGTC	5 cut(s)	280, 319, 459, 614, 1126
ScrFI	CCNGG	7 cut(s)	223, 1016, 1230, 1319, 1610, 1935, 1948
SduI	GDGCHC	6 cut(s)	634, 657, 839, 1764, 1835, 1845
SfaNI	GCATC	6 cut(s)	943, 1194, 1232, 1536, 1579, 1724
SfcI	CTRYAG	2 cut(s)	1163, 1651
Sfr274I	CTCGAG	1 cut(s)	750
SgrAI	CRCCGGYG	1 cut(s)	21
SinI	GGWCC	6 cut(s)	209, 419, 578, 1328, 1944, 2043
SlaI	CTCGAG	1 cut(s)	750
SmiMI	CAYNNNNRTG	4 cut(s)	200, 857, 1281, 1472
SmlI	CTYRAG	5 cut(s)	74, 275, 750, 1450, 1521
SmoI	CTYRAG	5 cut(s)	74, 275, 750, 1450, 1521
SpeI	ACTAGT	3 cut(s)	14, 1058, 1456
SseBI	AGGCCT	1 cut(s)	1014
SsiI	CCGC	5 cut(s)	935, 996, 1537, 1630, 2094
SspMI	CTAG	9 cut(s)	15, 213, 617, 746, 902, 1059, 1457, 1682, 2013
SstI	GAGCTC	1 cut(s)	1835
StuI	AGGCCT	1 cut(s)	1014
StyD4I	CCNGG	7 cut(s)	221, 1014, 1228, 1317, 1608, 1933, 1946
StyI	CCWWGG	5 cut(s)	291, 769, 991, 1354, 1746
TaiI	ACGT	7 cut(s)	95, 236, 500, 919, 1003, 2201, 2219
TaqI	TCGA	8 cut(s)	56, 453, 645, 729, 751, 805, 894, 965
TatI	WGTACW	2 cut(s)	11, 2136
TfiI	GAWTC	5 cut(s)	463, 862, 1252, 1396, 1999
Tru1I	TTAA	4 cut(s)	276, 324, 479, 1484
Tru9I	TTAA	4 cut(s)	276, 324, 479, 1484
TseFI	GTSAC	3 cut(s)	26, 100, 1283
TseI	GCWGC	4 cut(s)	401, 445, 757, 1865
Tsp45I	GTSAC	3 cut(s)	26, 100, 1283
Vha464I	CTTAAG	1 cut(s)	275
VneI	GTGCAC	1 cut(s)	653
VpaK11BI	GGWCC	6 cut(s)	209, 419, 578, 1328, 1944, 2043
XapI	RAATTY	3 cut(s)	714, 908, 1364
XbaI	TCTAGA	1 cut(s)	616
XcmI	CCANNNNNNNNNTGG	4 cut(s)	998, 1816, 1852, 1931
XhoI	CTCGAG	1 cut(s)	750
XmiI	GTMKAC	2 cut(s)	230, 1063
XmnI	GAANNNNTTC	1 cut(s)	2076
XspI	CTAG	9 cut(s)	15, 213, 617, 746, 902, 1059, 1457, 1682, 2013
ZrmI	AGTACT	1 cut(s)	13

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.