Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0015635

Physical Location & Seq

Genomic Coordinates Reverse (-)

32458657 .. 32465835

Gene Structure 7179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002338

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGGTCCCAGTGGGGCTGGAAAGTCGACGTTCTTGGATGGAGTTGCCGGGAGAATAGCGGGTGGAAGTCTTAAAGGGAGAGTGTCCTTGGATGGGAAGGAAATGAGTCCTAGCATAATTAAGAGGACTTCAGCTTATATTATGCAGGATGATAGGCTCTTCCCAACCCTTACAGTCTATGAGACTTTGATGTTCGCCGCTGATTTTATGTTGGGGCCGGTCACAACCACTGAGAAGAAACAGCGTGTTGAAAAGTTGATTCAACAGCTCAGCTTATCCTCAGCTCGGAACACTTTCATAAGTGATCATGAGGGCAGTCGAGGAGTGTCTGGAGGAGAGCGCCACCGACTCTCTATTGGTGTTGGCATCATTCACGGACCTGCCCTCCTCTTCCTCGACTACGCTCACAGTGTTATCGAAAAGGTCCACCACATTGCTGCACGCTATGGAAGCACTGTGATCCTCACCGTTCACCAGCCCTCGTCGAGAATCCAAGTGCTTCTCAACCATATGCTCATCCGAGCTCGTGGCCAGCTCATGTATCAAGGGTCACCGAAAGACGTGTCTCTTCATCTCGGCCGAATGGGACGGAAAGTCCACAAAGAAGAGAGTCCAAGTGAGTACCTCATCGATGTTATTCAGGAATATGATCAATCCGAACATGGAGTCGAGGCACTCGCTGAGTTTGCACGTACAGGCCTCGAGAAGAATGGAAAGCGGCTTCCTTTGCAGACTAGTACACATGTGATCAATGATTTTGATCGTAGTTTGAGGAGCCCTTATAGCAGTAAGAGCCCTTGTAACACTTCGAGGTCATGGACTGCTGGGAATAGTGGAGTCATGGACACATTTCACAGAACGCCCGAGCTCTTCCTCTCAAGGCTCGTAGTCCTTACATTCATGGGCTTCTTAATGGCCACCATGTTCAAGAACCCGCCCGAGAACGCTCAAGGCATCACCAACAGCCTCAGTTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCATCCAACGATGCTGTCCCCGCCTTCATCCAAGAGCGCTTCATCTTTGTTCGTGAGACCGCTCACAGTGCCTACCGACCCTTCTCTTACACAATAGCTAGCCTAATCACTTACCTACCTTTTCTTCTGCTCCAAGCTGCAGTTTACGCAGGTATTCTTTGGTTTTCCCTAAAGCTCCGCGGACCCTTCCTCTACTTCTTGGTCGTTCTCTATGTCTCTCTCCTCTCTACAAACTCGTTTGTGGTGTTTGTGAGCTCAGTTGTGCCCAACCACATCTTGGGTTACGCCGCAGTTATTGCTTTCACTGCTCTCTTCTTGTTCTGTGGATACTTCTTGAACAGTAATGACATTCCTAAATATTGGAAGTGGATGAACTACGTCTCCACCATGACATACCCATATGAAGGTTTGATAATGCATCAATATCAGACCCATCTTCCTTTCGGACAAAATCCAAATGATAGCAACATTACTGGTTTTCAAATTTTGGACAGTCTTCATATAAACTATGGAGGAGGCGAGACACTGTCGTCGGCGAAGAAGTGGGAGAAGATTTACATAATGTTGGGTTGGACTGTCCTGAATAGGATCTTGTTTTACGTCATTCGATTTTTCTCCAAGAACCAGAGGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043492 GO:0044085 GO:0044425 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

547

Amino Acids

61.48

Weight (kDa)

9.38

Isoelectric Point (pI)

41.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	1 - 133	5.3e-19	ABC transporter
ABC2_membrane	PF01061	284 - 474	1.9e-34	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015635)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g29080
malus_domestica	MD01G1044600.v1.1 MD15G1306900.v1.1
prunus_persica	Prupe.6G208600_v2.0.a1
pyrus_communis	pycom15g27090
rosa_chinensis	RchiOBHm_Chr7g0221691
rosa_laevigata	RLG00000002137 RLG00000002338
rosa_multiflora	Rmu_sc0002824.1_g000008
rosa_roxburghii	Rroxscaffold_3G00238110
rosa_rugosa	Rorug07G0203000
rosa_samantha	Rh7AG343700 Rh7BG333800 Rh7CG361100 Rh7DG341400
rosa_wichuraiana	Rw7G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1534
Acc36I	ACCTGC	2 cut(s)	388, 1145
AccB7I	CCANNNNNTGG	1 cut(s)	1282
AccBSI	CCGCTC	1 cut(s)	1067
AccI	GTMKAC	1 cut(s)	26
AccII	CGCG	1 cut(s)	1185
AciI	CCGC	9 cut(s)	59, 198, 718, 935, 1026, 1065, 1183, 1185, 1293
AclWI	GGATC	2 cut(s)	454, 1601
AcoI	YGGCCR	3 cut(s)	529, 577, 915
AcsI	RAATTY	1 cut(s)	1488
AcuI	CTGAAG	1 cut(s)	114
AfaI	GTAC	3 cut(s)	623, 694, 739
AfeI	AGCGCT	1 cut(s)	1043
AfiI	CCNNNNNNNGG	4 cut(s)	93, 285, 1282, 1409
AflIII	ACRYGT	2 cut(s)	561, 742
AgsI	TTSAA	5 cut(s)	251, 263, 928, 1342, 1487
AhdI	GACNNNNNGTC	1 cut(s)	593
AhlI	ACTAGT	1 cut(s)	734
AjiI	CACGTC	1 cut(s)	562
AloI	GAACNNNNNNTCC	2 cut(s)	1370, 1402
Alw21I	GWGCWC	3 cut(s)	526, 870, 1262
Alw26I	GTCTC	6 cut(s)	176, 570, 1055, 1225, 1390, 1520
AlwI	GGATC	2 cut(s)	454, 1601
Ama87I	CYCGRG	3 cut(s)	701, 863, 938
Aor51HI	AGCGCT	1 cut(s)	1043
AoxI	GGCC	5 cut(s)	215, 529, 577, 697, 915
ApeKI	GCWGC	2 cut(s)	437, 1142
ApoI	RAATTY	1 cut(s)	1488
ArsI	GACNNNNNNTTYG	4 cut(s)	548, 580, 651, 683
Asp700I	GAANNNNTTC	1 cut(s)	293
AspLEI	GCGC	2 cut(s)	342, 1044
AspS9I	GGNCC	5 cut(s)	5, 215, 377, 424, 1187
AsuC2I	CCSGG	1 cut(s)	49
AsuHPI	GGTGA	5 cut(s)	457, 464, 543, 949, 976
AsuNHI	GCTAGC	1 cut(s)	1103
AvaI	CYCGRG	3 cut(s)	701, 863, 938
AvaII	GGWCC	4 cut(s)	5, 377, 424, 1187
BaeGI	GKGCMC	1 cut(s)	1272
BalI	TGGCCA	2 cut(s)	531, 917
BanII	GRGCYC	5 cut(s)	526, 779, 797, 870, 1262
BauI	CACGAG	1 cut(s)	525
BbsI	GAAGAC	1 cut(s)	1493
Bbv12I	GWGCWC	3 cut(s)	526, 870, 1262
BbvCI	CCTCAGC	1 cut(s)	280
BbvI	GCAGC	2 cut(s)	424, 1129
BccI	CCATC	3 cut(s)	32, 86, 1446
BciVI	GTATCC	1 cut(s)	1325
BclI	TGATCA	3 cut(s)	304, 649, 747
BcnI	CCSGG	1 cut(s)	49
BcoDI	GTCTC	6 cut(s)	176, 570, 1055, 1225, 1390, 1520
BcuI	ACTAGT	1 cut(s)	734
BfaI	CTAG	3 cut(s)	111, 735, 1104
BfmI	CTRYAG	1 cut(s)	1143
BfoI	RGCGCY	2 cut(s)	343, 1045
BfuAI	ACCTGC	2 cut(s)	388, 1145
BfuI	GTATCC	1 cut(s)	1325
BisI	GCNGC	5 cut(s)	198, 438, 719, 1143, 1293
BlpI	GCTNAGC	1 cut(s)	269
BlsI	GCNGC	5 cut(s)	199, 439, 720, 1144, 1294
Bme1390I	CCNGG	1 cut(s)	49
Bme18I	GGWCC	4 cut(s)	5, 377, 424, 1187
BmeRI	GACNNNNNGTC	1 cut(s)	593
BmeT110I	CYCGRG	3 cut(s)	701, 863, 938
BmgBI	CACGTC	1 cut(s)	562
BmgT120I	GGNCC	5 cut(s)	5, 215, 377, 424, 1187
BmiI	GGNNCC	5 cut(s)	6, 7, 216, 776, 1189
BmrFI	CCNGG	1 cut(s)	49
BmrI	ACTGGG	1 cut(s)	3
BmsI	GCATC	4 cut(s)	375, 963, 1006, 1432
BmtI	GCTAGC	1 cut(s)	1107
BmuI	ACTGGG	1 cut(s)	3
BpiI	GAAGAC	1 cut(s)	1493
BpmI	CTGGAG	1 cut(s)	351
Bpu10I	CCTNAGC	1 cut(s)	280
Bpu1102I	GCTNAGC	1 cut(s)	269
BpuEI	CTTGAG	2 cut(s)	862, 933
BpuMI	CCSGG	1 cut(s)	49
Bsa29I	ATCGAT	1 cut(s)	630
BsaAI	YACGTR	1 cut(s)	692
BsaBI	GATNNNNATC	1 cut(s)	759
BsaI	GGTCTC	1 cut(s)	1055
BsaJI	CCNNGG	2 cut(s)	87, 1183
BsaXI	ACNNNNNCTCC	4 cut(s)	369, 399, 1370, 1400
Bsc4I	CCNNNNNNNGG	4 cut(s)	93, 285, 1282, 1409
Bse118I	RCCGGY	1 cut(s)	217
Bse1I	ACTGG	2 cut(s)	9, 1483
Bse3DI	GCAATG	1 cut(s)	432
Bse8I	GATNNNNATC	1 cut(s)	759
BseCI	ATCGAT	1 cut(s)	630
BseDI	CCNNGG	2 cut(s)	87, 1183
BseGI	GGATG	7 cut(s)	43, 97, 154, 516, 1007, 1032, 1380
BseJI	GATNNNNATC	1 cut(s)	759
BseLI	CCNNNNNNNGG	4 cut(s)	93, 285, 1282, 1409
BseMI	GCAATG	1 cut(s)	432
BseMII	CTCAG	6 cut(s)	222, 283, 294, 672, 982, 1275
BseNI	ACTGG	2 cut(s)	9, 1483
BseRI	GAGGAG	6 cut(s)	336, 348, 377, 787, 1217, 1533
BseSI	GKGCMC	1 cut(s)	1272
BseX3I	CGGCCG	1 cut(s)	577
BseXI	GCAGC	2 cut(s)	424, 1129
BseYI	CCCAGC	1 cut(s)	824
BsgI	GTGCAG	1 cut(s)	423
Bsh1236I	CGCG	1 cut(s)	1185
Bsh1285I	CGRYCG	1 cut(s)	580
BshFI	GGCC	5 cut(s)	217, 531, 579, 699, 917
BshVI	ATCGAT	1 cut(s)	630
BsiEI	CGRYCG	1 cut(s)	580
BsiHKAI	GWGCWC	3 cut(s)	526, 870, 1262
BsiHKCI	CYCGRG	3 cut(s)	701, 863, 938
BsiSI	CCGG	2 cut(s)	48, 218
BslFI	GGGAC	2 cut(s)	600, 1007
BslI	CCNNNNNNNGG	4 cut(s)	93, 285, 1282, 1409
BsmAI	GTCTC	6 cut(s)	176, 570, 1055, 1225, 1390, 1520
BsmBI	CGTCTC	1 cut(s)	1390
BsmFI	GGGAC	2 cut(s)	600, 1007
BsnI	GGCC	5 cut(s)	217, 531, 579, 699, 917
Bso31I	GGTCTC	1 cut(s)	1055
BsoBI	CYCGRG	3 cut(s)	701, 863, 938
Bsp1286I	GDGCHC	6 cut(s)	526, 779, 797, 870, 1262, 1272
Bsp143I	GATC	6 cut(s)	304, 459, 649, 747, 760, 1593
Bsp1720I	GCTNAGC	1 cut(s)	269
BspACI	CCGC	9 cut(s)	59, 198, 718, 935, 1026, 1065, 1183, 1185, 1293
BspANI	GGCC	5 cut(s)	217, 531, 579, 699, 917
BspCNI	CTCAG	6 cut(s)	223, 282, 293, 673, 981, 1274
BspDI	ATCGAT	1 cut(s)	630
BspFNI	CGCG	1 cut(s)	1185
BspHI	TCATGA	1 cut(s)	307
BspLI	GGNNCC	5 cut(s)	6, 7, 216, 776, 1189
BspMAI	CTGCAG	1 cut(s)	1147
BspMI	ACCTGC	2 cut(s)	388, 1145
BspOI	GCTAGC	1 cut(s)	1107
BspPI	GGATC	2 cut(s)	454, 1601
BspQI	GCTCTTC	2 cut(s)	164, 875
BspTNI	GGTCTC	1 cut(s)	1055
BsrBI	CCGCTC	1 cut(s)	1067
BsrDI	GCAATG	1 cut(s)	432
BsrFI	RCCGGY	1 cut(s)	217
BsrI	ACTGG	2 cut(s)	9, 1483
BssAI	RCCGGY	1 cut(s)	217
BssECI	CCNNGG	2 cut(s)	87, 1183
BssMI	GATC	6 cut(s)	304, 459, 649, 747, 760, 1593
BssSI	CACGAG	1 cut(s)	525
BssT1I	CCWWGG	1 cut(s)	87
Bst2BI	CACGAG	1 cut(s)	525
Bst6I	CTCTTC	7 cut(s)	164, 395, 573, 600, 875, 1001, 1322
BstAPI	GCANNNNNTGC	1 cut(s)	1301
BstBAI	YACGTR	1 cut(s)	692
BstC8I	GCNNGC	3 cut(s)	442, 533, 1105
BstDEI	CTNAG	6 cut(s)	231, 269, 280, 681, 968, 1261
BstDSI	CCRYGG	1 cut(s)	1183
BstEII	GGTNACC	1 cut(s)	549
BstF5I	GGATG	7 cut(s)	43, 97, 154, 516, 1007, 1032, 1380
BstFNI	CGCG	1 cut(s)	1185
BstH2I	RGCGCY	2 cut(s)	343, 1045
BstHHI	GCGC	2 cut(s)	342, 1044
BstKTI	GATC	6 cut(s)	307, 462, 652, 750, 763, 1596
BstMAI	GTCTC	6 cut(s)	176, 570, 1055, 1225, 1390, 1520
BstMBI	GATC	6 cut(s)	304, 459, 649, 747, 760, 1593
BstMCI	CGRYCG	1 cut(s)	580
BstNSI	RCATGY	1 cut(s)	746
BstPI	GGTNACC	1 cut(s)	549
BstSCI	CCNGG	1 cut(s)	47
BstSFI	CTRYAG	1 cut(s)	1143
BstSLI	GKGCMC	1 cut(s)	1272
BstUI	CGCG	1 cut(s)	1185
BstV1I	GCAGC	2 cut(s)	424, 1129
BstV2I	GAAGAC	1 cut(s)	1493
BstX2I	RGATCY	1 cut(s)	1593
BstYI	RGATCY	1 cut(s)	1593
BstZI	CGGCCG	1 cut(s)	577
Bsu15I	ATCGAT	1 cut(s)	630
BsuI	GTATCC	1 cut(s)	1325
BsuRI	GGCC	5 cut(s)	217, 531, 579, 699, 917
BsuTUI	ATCGAT	1 cut(s)	630
BtgI	CCRYGG	1 cut(s)	1183
BtrI	CACGTC	1 cut(s)	562
BtsCI	GGATG	7 cut(s)	43, 97, 154, 516, 1007, 1032, 1380
BtsI	GCAGTG	1 cut(s)	1308
BtsIMutI	CAGTG	7 cut(s)	16, 228, 415, 453, 1078, 1308, 1529
BveI	ACCTGC	2 cut(s)	388, 1145
Cac8I	GCNNGC	3 cut(s)	442, 533, 1105
CciI	TCATGA	1 cut(s)	307
CfoI	GCGC	2 cut(s)	342, 1044
Cfr10I	RCCGGY	1 cut(s)	217
Cfr13I	GGNCC	5 cut(s)	5, 215, 377, 424, 1187
Cfr42I	CCGCGG	1 cut(s)	1186
ClaI	ATCGAT	1 cut(s)	630
Csp6I	GTAC	3 cut(s)	622, 693, 738
CviAII	CATG	9 cut(s)	308, 538, 662, 743, 816, 841, 901, 922, 1393
CviQI	GTAC	3 cut(s)	622, 693, 738
DdeI	CTNAG	6 cut(s)	231, 269, 280, 681, 968, 1261
DpnI	GATC	6 cut(s)	306, 461, 651, 749, 762, 1595
DpnII	GATC	6 cut(s)	304, 459, 649, 747, 760, 1593
DrdI	GACNNNNNNGTC	1 cut(s)	1534
DriI	GACNNNNNGTC	1 cut(s)	593
DseDI	GACNNNNNNGTC	1 cut(s)	1534
EaeI	YGGCCR	3 cut(s)	529, 577, 915
EagI	CGGCCG	1 cut(s)	577
Eam1104I	CTCTTC	7 cut(s)	164, 395, 573, 600, 875, 1001, 1322
Eam1105I	GACNNNNNGTC	1 cut(s)	593
EarI	CTCTTC	7 cut(s)	164, 395, 573, 600, 875, 1001, 1322
Ecl136II	GAGCTC	3 cut(s)	524, 868, 1260
EclXI	CGGCCG	1 cut(s)	577
Eco130I	CCWWGG	1 cut(s)	87
Eco147I	AGGCCT	1 cut(s)	699
Eco24I	GRGCYC	5 cut(s)	526, 779, 797, 870, 1262
Eco31I	GGTCTC	1 cut(s)	1055
Eco47I	GGWCC	4 cut(s)	5, 377, 424, 1187
Eco47III	AGCGCT	1 cut(s)	1043
Eco52I	CGGCCG	1 cut(s)	577
Eco53kI	GAGCTC	3 cut(s)	524, 868, 1260
Eco57I	CTGAAG	1 cut(s)	114
Eco88I	CYCGRG	3 cut(s)	701, 863, 938
Eco91I	GGTNACC	1 cut(s)	549
EcoICRI	GAGCTC	3 cut(s)	524, 868, 1260
EcoO109I	RGGNCCY	1 cut(s)	5
EcoO65I	GGTNACC	1 cut(s)	549
EcoT14I	CCWWGG	1 cut(s)	87
EcoT22I	ATGCAT	1 cut(s)	1425
EcoT38I	GRGCYC	5 cut(s)	526, 779, 797, 870, 1262
ErhI	CCWWGG	1 cut(s)	87
Esp3I	CGTCTC	1 cut(s)	1390
FaeI	CATG	9 cut(s)	311, 541, 665, 746, 819, 844, 904, 925, 1396
FaqI	GGGAC	2 cut(s)	600, 1007
FatI	CATG	9 cut(s)	307, 537, 661, 742, 815, 840, 900, 921, 1392
FauI	CCCGC	3 cut(s)	52, 942, 1033
FauNDI	CATATG	2 cut(s)	510, 1405
FbaI	TGATCA	3 cut(s)	304, 649, 747
FblI	GTMKAC	1 cut(s)	26
Fnu4HI	GCNGC	5 cut(s)	198, 438, 719, 1143, 1293
FokI	GGATG	7 cut(s)	50, 104, 161, 503, 994, 1019, 1387
FriOI	GRGCYC	5 cut(s)	526, 779, 797, 870, 1262
Fsp4HI	GCNGC	5 cut(s)	198, 438, 719, 1143, 1293
FspBI	CTAG	3 cut(s)	111, 735, 1104
GlaI	GCGC	2 cut(s)	341, 1043
GluI	GCNGC	5 cut(s)	198, 438, 719, 1143, 1293
GsaI	CCCAGC	1 cut(s)	828
GsuI	CTGGAG	1 cut(s)	351
HaeII	RGCGCY	2 cut(s)	343, 1045
HaeIII	GGCC	5 cut(s)	217, 531, 579, 699, 917
HapII	CCGG	2 cut(s)	48, 218
HhaI	GCGC	2 cut(s)	342, 1044
Hin1II	CATG	9 cut(s)	311, 541, 665, 746, 819, 844, 904, 925, 1396
Hin6I	GCGC	2 cut(s)	340, 1042
HinP1I	GCGC	2 cut(s)	340, 1042
HincII	GTYRAC	1 cut(s)	27
HindII	GTYRAC	1 cut(s)	27
HinfI	GANTC	7 cut(s)	106, 259, 348, 489, 610, 666, 837
HpaII	CCGG	2 cut(s)	48, 218
HphI	GGTGA	5 cut(s)	457, 464, 543, 949, 976
Hpy166II	GTNNAC	6 cut(s)	27, 427, 472, 598, 740, 1150
Hpy188I	TCNGA	5 cut(s)	288, 521, 658, 1434, 1451
Hpy188III	TCNNGA	9 cut(s)	308, 330, 486, 641, 703, 928, 1058, 1339, 1585
Hpy8I	GTNNAC	6 cut(s)	27, 427, 472, 598, 740, 1150
Hpy99I	CGWCG	3 cut(s)	31, 487, 1540
HpyAV	CCTTC	5 cut(s)	91, 1039, 1096, 1201, 1403
HpyCH4IV	ACGT	5 cut(s)	29, 561, 691, 1383, 1605
HpyCH4V	TGCA	6 cut(s)	145, 440, 689, 730, 1145, 1423
HpyF3I	CTNAG	6 cut(s)	231, 269, 280, 681, 968, 1261
HpySE526I	ACGT	5 cut(s)	29, 561, 691, 1383, 1605
Hsp92II	CATG	9 cut(s)	311, 541, 665, 746, 819, 844, 904, 925, 1396
HspAI	GCGC	2 cut(s)	340, 1042
KflI	GGGWCCC	1 cut(s)	5
Ksp22I	TGATCA	3 cut(s)	304, 649, 747
KspI	CCGCGG	1 cut(s)	1186
Kzo9I	GATC	6 cut(s)	304, 459, 649, 747, 760, 1593
LguI	GCTCTTC	2 cut(s)	164, 875
LmnI	GCTCC	3 cut(s)	774, 1140, 1185
Lsp1109I	GCAGC	2 cut(s)	424, 1129
LweI	GCATC	4 cut(s)	375, 963, 1006, 1432
MaeI	CTAG	3 cut(s)	111, 735, 1104
MaeII	ACGT	5 cut(s)	29, 561, 691, 1383, 1605
MaeIII	GTNAC	4 cut(s)	220, 549, 800, 1286
MalI	GATC	6 cut(s)	306, 461, 651, 749, 762, 1595
MbiI	CCGCTC	1 cut(s)	1067
MboI	GATC	6 cut(s)	304, 459, 649, 747, 760, 1593
MflI	RGATCY	1 cut(s)	1593
MhlI	GDGCHC	6 cut(s)	526, 779, 797, 870, 1262, 1272
MlsI	TGGCCA	2 cut(s)	531, 917
MluCI	AATT	2 cut(s)	117, 1488
MluNI	TGGCCA	2 cut(s)	531, 917
MlyI	GAGTC	5 cut(s)	115, 342, 619, 675, 846
MmeI	TCCRAC	2 cut(s)	1035, 1556
Mox20I	TGGCCA	2 cut(s)	531, 917
Mph1103I	ATGCAT	1 cut(s)	1425
MroXI	GAANNNNTTC	1 cut(s)	293
MscI	TGGCCA	2 cut(s)	531, 917
MseI	TTAA	3 cut(s)	72, 120, 911
Msp20I	TGGCCA	2 cut(s)	531, 917
MspA1I	CMGCKG	2 cut(s)	200, 1185
MspI	CCGG	2 cut(s)	48, 218
MspR9I	CCNGG	1 cut(s)	49
MvnI	CGCG	1 cut(s)	1185
NciI	CCSGG	1 cut(s)	49
NdeI	CATATG	2 cut(s)	510, 1405
NdeII	GATC	6 cut(s)	304, 459, 649, 747, 760, 1593
NheI	GCTAGC	1 cut(s)	1103
NlaIII	CATG	9 cut(s)	311, 541, 665, 746, 819, 844, 904, 925, 1396
NlaIV	GGNNCC	5 cut(s)	6, 7, 216, 776, 1189
NmeAIII	GCCGAG	1 cut(s)	555
NmuCI	GTSAC	2 cut(s)	220, 549
NsiI	ATGCAT	1 cut(s)	1425
NspI	RCATGY	1 cut(s)	746
PaeR7I	CTCGAG	1 cut(s)	701
PagI	TCATGA	1 cut(s)	307
PceI	AGGCCT	1 cut(s)	699
PciI	ACATGT	1 cut(s)	742
PciSI	GCTCTTC	2 cut(s)	164, 875
PdmI	GAANNNNTTC	1 cut(s)	293
PfeI	GAWTC	2 cut(s)	259, 489
PflFI	GACNNNGTC	1 cut(s)	1531
PflMI	CCANNNNNTGG	1 cut(s)	1282
PkrI	GCNGC	5 cut(s)	199, 439, 720, 1144, 1294
PleI	GAGTC	5 cut(s)	114, 342, 618, 674, 845
PpsI	GAGTC	5 cut(s)	114, 342, 618, 674, 845
Ppu21I	YACGTR	1 cut(s)	692
PpuMI	RGGWCCY	1 cut(s)	5
PscI	ACATGT	1 cut(s)	742
Psp124BI	GAGCTC	3 cut(s)	526, 870, 1262
Psp5II	RGGWCCY	1 cut(s)	5
PspEI	GGTNACC	1 cut(s)	549
PspFI	CCCAGC	1 cut(s)	824
PspN4I	GGNNCC	5 cut(s)	6, 7, 216, 776, 1189
PspPI	GGNCC	5 cut(s)	5, 215, 377, 424, 1187
PspPPI	RGGWCCY	1 cut(s)	5
PstI	CTGCAG	1 cut(s)	1147
PsuI	RGATCY	1 cut(s)	1593
PsyI	GACNNNGTC	1 cut(s)	1531
RsaI	GTAC	3 cut(s)	623, 694, 739
RsaNI	GTAC	3 cut(s)	622, 693, 738
SacI	GAGCTC	3 cut(s)	526, 870, 1262
SacII	CCGCGG	1 cut(s)	1186
SalI	GTCGAC	1 cut(s)	25
SapI	GCTCTTC	2 cut(s)	164, 875
SaqAI	TTAA	3 cut(s)	72, 120, 911
SatI	GCNGC	5 cut(s)	198, 438, 719, 1143, 1293
Sau3AI	GATC	6 cut(s)	304, 459, 649, 747, 760, 1593
Sau96I	GGNCC	5 cut(s)	5, 215, 377, 424, 1187
SchI	GAGTC	5 cut(s)	115, 342, 619, 675, 846
ScrFI	CCNGG	1 cut(s)	49
SduI	GDGCHC	6 cut(s)	526, 779, 797, 870, 1262, 1272
SfaNI	GCATC	4 cut(s)	375, 963, 1006, 1432
SfcI	CTRYAG	1 cut(s)	1143
Sfr274I	CTCGAG	1 cut(s)	701
Sfr303I	CCGCGG	1 cut(s)	1186
SgrBI	CCGCGG	1 cut(s)	1186
SinI	GGWCC	4 cut(s)	5, 377, 424, 1187
SlaI	CTCGAG	1 cut(s)	701
SmlI	CTYRAG	3 cut(s)	701, 877, 948
SmoI	CTYRAG	3 cut(s)	701, 877, 948
SpeI	ACTAGT	1 cut(s)	734
Sse9I	AATT	2 cut(s)	117, 1488
SseBI	AGGCCT	1 cut(s)	699
SsiI	CCGC	9 cut(s)	59, 198, 718, 935, 1026, 1065, 1183, 1185, 1293
SspI	AATATT	1 cut(s)	1364
SspMI	CTAG	3 cut(s)	111, 735, 1104
SstI	GAGCTC	3 cut(s)	526, 870, 1262
StuI	AGGCCT	1 cut(s)	699
StyD4I	CCNGG	1 cut(s)	47
StyI	CCWWGG	1 cut(s)	87
TaiI	ACGT	5 cut(s)	32, 564, 694, 1386, 1608
TasI	AATT	2 cut(s)	117, 1488
TatI	WGTACW	1 cut(s)	737
TauI	GCSGC	3 cut(s)	200, 721, 1295
TfiI	GAWTC	2 cut(s)	259, 489
Tru1I	TTAA	3 cut(s)	72, 120, 911
Tru9I	TTAA	3 cut(s)	72, 120, 911
TscAI	CASTG	7 cut(s)	16, 235, 415, 460, 1078, 1315, 1536
TseFI	GTSAC	2 cut(s)	220, 549
TseI	GCWGC	2 cut(s)	437, 1142
Tsp45I	GTSAC	2 cut(s)	220, 549
TspDTI	ATGAA	9 cut(s)	286, 560, 889, 967, 1021, 1036, 1391, 1422, 1493
TspGWI	ACGGA	2 cut(s)	390, 604
TspRI	CASTG	7 cut(s)	16, 235, 415, 460, 1078, 1315, 1536
Tth111I	GACNNNGTC	1 cut(s)	1531
Van91I	CCANNNNNTGG	1 cut(s)	1282
VpaK11BI	GGWCC	4 cut(s)	5, 377, 424, 1187
XapI	RAATTY	1 cut(s)	1488
XceI	RCATGY	1 cut(s)	746
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1279
XhoI	CTCGAG	1 cut(s)	701
XmiI	GTMKAC	1 cut(s)	26
XmnI	GAANNNNTTC	1 cut(s)	293
XspI	CTAG	3 cut(s)	111, 735, 1104
Zsp2I	ATGCAT	1 cut(s)	1425

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.