Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002824.1

Orthogroup ID

OG0015635

Physical Location & Seq

Genomic Coordinates Forward (+)

40664 .. 46357

Gene Structure 5694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002824.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3069 bp

atgtttaggttactctctctgagaggtaggtggaggtcgtggcctcctggcgacggttctgcaaattgggcaggaggagatgggttttccctctcatttggtcgctgggagattgaaggcgacgagatttttcgttgtcggagtctcaaaatcttgtttcttgttcttttgttcggggtctggtgccttagcagcagtgatggcgatcctgggtcgtgcaaggctgccacattgggctgtgttcctgggcaacctagatcggtaaaggttctggggtctcgttgcttgcccctgactgagcaggacaatttggtggccaggttgcggactggagttccgagcagtggtttggggaacggtctggtgttcttgggttggggttggctgcggcttggtgcggcgaagattgtggatggttggacaggtacagaactagtgaccggtactgttcgatgggctgtgcagtggagcgccgggcggcgatcttcttcgggtgttcatgctttgccgggtggctgggggctgttggcggatggggacattgacaatgatggctgtgtcgggctagcaatggaggcacggatctgtgccagagtggagctggctgcaattgggagcgacaaagatggcggtgggcgatggtggaagactgcctcagccggcgtcgtcaaagggaggtggactggtactccgtcgtgctgggtttgggtgcccttggggttgggtggccttagcatgttcagttgggctttgagcccttctgggcctagtgctagggtttccctttcttttgggcctatgcctggcacatggggtagttgggctgctaggtctcctgatcaacatatggctcatcgtcccaatgaccatcctcggcgcgagacagtgatcgatatagggcaccggaagcccgcaaacttcactggcgggctcgagttttcgagcctcacatacacggtgacaaagaagatcaagcttgacgggaaatggctgaagcaagatgtagacttgctccacaagatcacaggttttgcacccaagggttgcatcacggctgtgatgggtcccagtggggccggaaagtcgacgttcttggatggagttgccgggagaatagcgagtggaagtcttaaagggagagtgtccttggacgggaaggaaatgagtcctagcataattaagaggacttcagcttatattatgcaggatgataggcttttcccaacccttacagtctatgagactttgatgttcgctgctgattttaggttggggccggtcacaactactgagaagaaacagcgtgttgaaaagttgattcaacagctcggcttatcgtcagctcggaacacttacataggtgatgagggcagtcgaggagtgtctggaggagagcgccgccgagtctctattggtgttgacatcattcacggacctgccctcctcttcctcgacgaaccaacatcaggcctagactccactagtgctcacagtgttatcgaaaaggtccaccacattgcacgctctggaagcactgtgatcctcaccattcaccagccctcgtccagaatccaattgcttctcgaccatatgcttatcctagctcgtggccagctcatgtatcaagggtcaccaaaagacgtgtctcttcatctcggcagaatgggactgaaagtccacaaagaagagagtccaattgagtacctcattgatgttattcaggaatatgaccaatccgaacatggagtcgaggcactcgctgagtttgcacgtacaggtgtgaaaccccctaggttgattgagggagacgtgtcgatttcaaccattctccccaccccaactccgccacgacgcggtggccgtgggaatgatttaggcctcgagaagaatggaaagcggcttcctttgcagactagtacacatgtgatcaatgattttgatcatagtttgaggagcccttataacacttcgaggtcatggacggctgggaatagtggagtcatggacacacttcacaggtttactcctttaaggaaacctaaagatctcaagatgcaaagccccatgagtgcatcccctggctacaattattcaagtgagatcattcagaacacaccaacaccacacagcagtgactacacagtaaatgaaaacgactatctgacccctgattatgatccaaatgcctcttcccaccacaacctggcacccaaatttgccaactccttctttcccgagacatggatccttatgcgccgcaacttcataaacattagcagaacacccgagctcttcctctcaaggctcgtagtccttacattcatgggcttcttaatggccaccatgttcaagaacccgcccgagaacgctcaaggcatcaccaaccgcctcagtttcttcatcttcaccgtctgcctcttcttcttctcatccaacgatgctgtccccgccttcatccaagagcgcttcatctttgttcgcgagaccgctcacaatgcctaccgagcctcctcttacaccatagctagcctaatcacttacctaccttttcttctgctccaagctgcagtttacgcaggtattgtctggtttgccttaaagctccgcggacctttcctctacttcttggtcgttctctatgtctctctcctctctacaaactcttttgtggtgtttgtgagctcagttgtgcccaactacatattgggttacgccgcagtcattgctttcactgctctcttcttcttgttctgtggatacttcttgaacagtaatgacattcctaaatattggaagtggatgaactacgtctccaccatgacatacccatatgaaggtttgataatgaatcaatatcagacccatcttcctttcggacaaaatccaaatggtaccaacattactggttttcaaattttggacagtcttcatataaactatggaggaggcgagaccctgtcttcggcgaagaagtgggagaagatttacataatgttgggttggactgtcctgtataggatcttgttttatctggtcattcgattcttctccaagaaccagaggacatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043492 GO:0044085 GO:0044425 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

1022

Amino Acids

113.0

Weight (kDa)

9.35

Isoelectric Point (pI)

42.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015635)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g29080
malus_domestica	MD01G1044600.v1.1 MD15G1306900.v1.1
prunus_persica	Prupe.6G208600_v2.0.a1
pyrus_communis	pycom15g27090
rosa_chinensis	RchiOBHm_Chr7g0221691
rosa_laevigata	RLG00000002137 RLG00000002338
rosa_multiflora	Rmu_sc0002824.1_g000008
rosa_roxburghii	Rroxscaffold_3G00238110
rosa_rugosa	Rorug07G0203000
rosa_samantha	Rh7AG343700 Rh7BG333800 Rh7CG361100 Rh7DG341400
rosa_wichuraiana	Rw7G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1962
Acc36I	ACCTGC	2 cut(s)	1444, 2567
Acc65I	GGTACC	1 cut(s)	2891
AccB1I	GGYRCC	5 cut(s)	183, 709, 900, 2206, 2891
AccB7I	CCANNNNNTGG	1 cut(s)	2203
AccBSI	CCGCTC	1 cut(s)	2489
AccI	GTMKAC	2 cut(s)	1005, 1085
AccII	CGCG	4 cut(s)	879, 1854, 2481, 2607
AclWI	GGATC	7 cut(s)	200, 590, 1534, 2171, 2239, 2252, 3026
AcoI	YGGCCR	4 cut(s)	315, 1609, 1858, 2337
AcsI	RAATTY	2 cut(s)	2213, 2913
AcuI	CTGAAG	2 cut(s)	1013, 1173
AcyI	GRCGYC	1 cut(s)	663
AfaI	GTAC	7 cut(s)	427, 445, 688, 1703, 1774, 1918, 2893
AfeI	AGCGCT	1 cut(s)	2465
AflIII	ACRYGT	3 cut(s)	1641, 1809, 1921
AgeI	ACCGGT	1 cut(s)	440
AgsI	TTSAA	8 cut(s)	116, 1310, 1322, 1821, 2094, 2350, 2767, 2912
AhdI	GACNNNNNGTC	1 cut(s)	1673
AhlI	ACTAGT	3 cut(s)	433, 1481, 1913
AjiI	CACGTC	2 cut(s)	1642, 1810
AjnI	CCWGG	7 cut(s)	46, 208, 244, 317, 802, 2077, 2202
AjuI	GAANNNNNNNTTGG	2 cut(s)	2173, 2205
AleI	CACNNNNGTG	2 cut(s)	1055, 2130
AloI	GAACNNNNNNTCC	2 cut(s)	2795, 2827
Alw21I	GWGCWC	3 cut(s)	1489, 2292, 2684
AlwI	GGATC	7 cut(s)	200, 590, 1534, 2171, 2239, 2252, 3026
Ama87I	CYCGRG	5 cut(s)	932, 1880, 2234, 2285, 2360
Aor51HI	AGCGCT	1 cut(s)	2465
ApeKI	GCWGC	7 cut(s)	192, 224, 385, 605, 824, 1256, 2564
ApoI	RAATTY	2 cut(s)	2213, 2913
ArsI	GACNNNNNNTTYG	6 cut(s)	1628, 1660, 1731, 1763, 2944, 2976
AsiGI	ACCGGT	1 cut(s)	440
Asp718I	GGTACC	1 cut(s)	2891
AspA2I	CCTAGG	1 cut(s)	1790
AspLEI	GCGC	5 cut(s)	473, 879, 1398, 2256, 2466
AspS9I	GGNCC	8 cut(s)	764, 794, 1064, 1074, 1274, 1433, 1507, 2609
AsuC2I	CCSGG	3 cut(s)	475, 510, 1108
AsuHPI	GGTGA	7 cut(s)	970, 1373, 1537, 1544, 1623, 2371, 2398
AsuNHI	GCTAGC	2 cut(s)	565, 2525
AvaI	CYCGRG	5 cut(s)	932, 1880, 2234, 2285, 2360
AvaII	GGWCC	4 cut(s)	1064, 1433, 1507, 2609
AvrII	CCTAGG	1 cut(s)	1790
BaeGI	GKGCMC	3 cut(s)	714, 903, 2694
BalI	TGGCCA	3 cut(s)	317, 1611, 2339
BamHI	GGATCC	1 cut(s)	2244
BanI	GGYRCC	5 cut(s)	183, 709, 900, 2206, 2891
BanII	GRGCYC	5 cut(s)	758, 933, 1958, 2292, 2684
BauI	CACGAG	1 cut(s)	1605
BbsI	GAAGAC	3 cut(s)	653, 2918, 2952
Bbv12I	GWGCWC	3 cut(s)	1489, 2292, 2684
BbvCI	CCTCAGC	1 cut(s)	655
BbvI	GCAGC	7 cut(s)	204, 211, 372, 592, 811, 1243, 2551
BceAI	ACGGC	3 cut(s)	1068, 1845, 1998
BcgI	CGANNNNNNTGC	2 cut(s)	41, 75
BciT130I	CCWGG	7 cut(s)	48, 210, 246, 319, 804, 2079, 2204
BciVI	GTATCC	1 cut(s)	2750
BclI	TGATCA	3 cut(s)	838, 1926, 1939
BcnI	CCSGG	3 cut(s)	475, 510, 1108
BcuI	ACTAGT	3 cut(s)	433, 1481, 1913
BfmI	CTRYAG	1 cut(s)	2565
BfoI	RGCGCY	3 cut(s)	474, 1399, 2467
BfuAI	ACCTGC	2 cut(s)	1444, 2567
BfuI	GTATCC	1 cut(s)	2750
BglII	AGATCT	1 cut(s)	2044
BlnI	CCTAGG	1 cut(s)	1790
Bme18I	GGWCC	4 cut(s)	1064, 1433, 1507, 2609
BmeRI	GACNNNNNGTC	1 cut(s)	1673
BmeT110I	CYCGRG	5 cut(s)	932, 1880, 2234, 2285, 2360
BmgBI	CACGTC	2 cut(s)	1642, 1810
BmgT120I	GGNCC	8 cut(s)	764, 794, 1064, 1074, 1274, 1433, 1507, 2609
BmrI	ACTGGG	1 cut(s)	1062
BmsI	GCATC	5 cut(s)	1056, 2043, 2081, 2385, 2428
BmtI	GCTAGC	2 cut(s)	569, 2529
BmuI	ACTGGG	1 cut(s)	1062
BpiI	GAAGAC	3 cut(s)	653, 2918, 2952
BpmI	CTGGAG	2 cut(s)	351, 1407
Bpu10I	CCTNAGC	3 cut(s)	188, 655, 731
BpuEI	CTTGAG	3 cut(s)	2033, 2284, 2355
BpuMI	CCSGG	3 cut(s)	475, 510, 1108
Bsa29I	ATCGAT	1 cut(s)	891
BsaAI	YACGTR	1 cut(s)	1772
BsaBI	GATNNNNATC	3 cut(s)	204, 1938, 2175
BsaHI	GRCGYC	1 cut(s)	663
BsaI	GGTCTC	4 cut(s)	282, 837, 2477, 2945
BsaWI	WCCGGW	2 cut(s)	440, 903
Bse118I	RCCGGY	3 cut(s)	440, 659, 1276
Bse1I	ACTGG	5 cut(s)	334, 688, 928, 1068, 2908
Bse3DI	GCAATG	3 cut(s)	576, 1515, 2721
Bse8I	GATNNNNATC	3 cut(s)	204, 1938, 2175
BseBI	CCWGG	7 cut(s)	48, 210, 246, 319, 804, 2079, 2204
BseCI	ATCGAT	1 cut(s)	891
BseGI	GGATG	9 cut(s)	418, 538, 868, 1102, 1213, 2072, 2429, 2454, 2805
BseJI	GATNNNNATC	3 cut(s)	204, 1938, 2175
BseMI	GCAATG	3 cut(s)	576, 1515, 2721
BseMII	CTCAG	7 cut(s)	11, 288, 669, 1281, 1752, 2404, 2697
BseNI	ACTGG	5 cut(s)	334, 688, 928, 1068, 2908
BseRI	GAGGAG	8 cut(s)	90, 1392, 1404, 1433, 1966, 2500, 2639, 2958
BseSI	GKGCMC	3 cut(s)	714, 903, 2694
BseXI	GCAGC	7 cut(s)	204, 211, 372, 592, 811, 1243, 2551
BseYI	CCCAGC	4 cut(s)	105, 516, 699, 1985
BsgI	GTGCAG	1 cut(s)	482
Bsh1236I	CGCG	4 cut(s)	879, 1854, 2481, 2607
BshNI	GGYRCC	5 cut(s)	183, 709, 900, 2206, 2891
BshTI	ACCGGT	1 cut(s)	440
BshVI	ATCGAT	1 cut(s)	891
BsiHKAI	GWGCWC	3 cut(s)	1489, 2292, 2684
BsiHKCI	CYCGRG	5 cut(s)	932, 1880, 2234, 2285, 2360
BsiSI	CCGG	8 cut(s)	441, 474, 509, 660, 904, 1077, 1107, 1277
BslFI	GGGAC	5 cut(s)	551, 843, 1050, 1680, 2429
BsmBI	CGTCTC	2 cut(s)	1800, 2815
BsmFI	GGGAC	5 cut(s)	551, 843, 1050, 1680, 2429
Bso31I	GGTCTC	4 cut(s)	282, 837, 2477, 2945
BsoBI	CYCGRG	5 cut(s)	932, 1880, 2234, 2285, 2360
Bsp1286I	GDGCHC	9 cut(s)	714, 758, 903, 933, 1489, 1958, 2292, 2684, 2694
Bsp68I	TCGCGA	1 cut(s)	2481
BspCNI	CTCAG	7 cut(s)	12, 289, 668, 1282, 1753, 2403, 2696
BspDI	ATCGAT	1 cut(s)	891
BspFNI	CGCG	4 cut(s)	879, 1854, 2481, 2607
BspMAI	CTGCAG	1 cut(s)	2569
BspMI	ACCTGC	2 cut(s)	1444, 2567
BspOI	GCTAGC	2 cut(s)	569, 2529
BspPI	GGATC	7 cut(s)	200, 590, 1534, 2171, 2239, 2252, 3026
BspQI	GCTCTTC	1 cut(s)	2297
BspT107I	GGYRCC	5 cut(s)	183, 709, 900, 2206, 2891
BspTNI	GGTCTC	4 cut(s)	282, 837, 2477, 2945
BsrBI	CCGCTC	1 cut(s)	2489
BsrDI	GCAATG	3 cut(s)	576, 1515, 2721
BsrFI	RCCGGY	3 cut(s)	440, 659, 1276
BsrI	ACTGG	5 cut(s)	334, 688, 928, 1068, 2908
BssAI	RCCGGY	3 cut(s)	440, 659, 1276
BssNI	GRCGYC	1 cut(s)	663
BssSI	CACGAG	1 cut(s)	1605
BssT1I	CCWWGG	4 cut(s)	714, 1038, 1146, 1790
Bst2BI	CACGAG	1 cut(s)	1605
Bst2UI	CCWGG	7 cut(s)	48, 210, 246, 319, 804, 2079, 2204
Bst6I	CTCTTC	7 cut(s)	1451, 1653, 1680, 2194, 2297, 2423, 2744
BstACI	GRCGYC	1 cut(s)	663
BstAPI	GCANNNNNTGC	1 cut(s)	2723
BstBAI	YACGTR	1 cut(s)	1772
BstC8I	GCNNGC	9 cut(s)	287, 567, 603, 661, 912, 929, 1522, 1613, 2527
BstDEI	CTNAG	9 cut(s)	20, 188, 297, 655, 731, 1290, 1761, 2390, 2683
BstDSI	CCRYGG	2 cut(s)	1861, 2605
BstEII	GGTNACC	1 cut(s)	1629
BstF5I	GGATG	9 cut(s)	418, 538, 868, 1102, 1213, 2072, 2429, 2454, 2805
BstFNI	CGCG	4 cut(s)	879, 1854, 2481, 2607
BstH2I	RGCGCY	3 cut(s)	474, 1399, 2467
BstHHI	GCGC	5 cut(s)	473, 879, 1398, 2256, 2466
BstNI	CCWGG	7 cut(s)	48, 210, 246, 319, 804, 2079, 2204
BstNSI	RCATGY	2 cut(s)	739, 1925
BstPI	GGTNACC	1 cut(s)	1629
BstSFI	CTRYAG	1 cut(s)	2565
BstSLI	GKGCMC	3 cut(s)	714, 903, 2694
BstUI	CGCG	4 cut(s)	879, 1854, 2481, 2607
BstV1I	GCAGC	7 cut(s)	204, 211, 372, 592, 811, 1243, 2551
BstV2I	GAAGAC	3 cut(s)	653, 2918, 2952
BstX2I	RGATCY	4 cut(s)	582, 2044, 2244, 3018
BstYI	RGATCY	4 cut(s)	582, 2044, 2244, 3018
Bsu15I	ATCGAT	1 cut(s)	891
BsuI	GTATCC	1 cut(s)	2750
BsuTUI	ATCGAT	1 cut(s)	891
BtgI	CCRYGG	2 cut(s)	1861, 2605
BtgZI	GCGATG	1 cut(s)	652
BtrI	CACGTC	2 cut(s)	1642, 1810
BtsCI	GGATG	9 cut(s)	418, 538, 868, 1102, 1213, 2072, 2429, 2454, 2805
BtsI	GCAGTG	5 cut(s)	202, 349, 470, 2137, 2730
BtuMI	TCGCGA	1 cut(s)	2481
BveI	ACCTGC	2 cut(s)	1444, 2567
Cac8I	GCNNGC	9 cut(s)	287, 567, 603, 661, 912, 929, 1522, 1613, 2527
CfoI	GCGC	5 cut(s)	473, 879, 1398, 2256, 2466
Cfr10I	RCCGGY	3 cut(s)	440, 659, 1276
Cfr13I	GGNCC	8 cut(s)	764, 794, 1064, 1074, 1274, 1433, 1507, 2609
Cfr42I	CCGCGG	1 cut(s)	2608
ClaI	ATCGAT	1 cut(s)	891
CseI	GACGC	2 cut(s)	652, 1860
Csp6I	GTAC	7 cut(s)	426, 444, 687, 1702, 1773, 1917, 2892
CspAI	ACCGGT	1 cut(s)	440
CviQI	GTAC	7 cut(s)	426, 444, 687, 1702, 1773, 1917, 2892
DdeI	CTNAG	9 cut(s)	20, 188, 297, 655, 731, 1290, 1761, 2390, 2683
DriI	GACNNNNNGTC	1 cut(s)	1673
EaeI	YGGCCR	4 cut(s)	315, 1609, 1858, 2337
Eam1104I	CTCTTC	7 cut(s)	1451, 1653, 1680, 2194, 2297, 2423, 2744
Eam1105I	GACNNNNNGTC	1 cut(s)	1673
EarI	CTCTTC	7 cut(s)	1451, 1653, 1680, 2194, 2297, 2423, 2744
EciI	GGCGGA	2 cut(s)	545, 1833
Ecl136II	GAGCTC	2 cut(s)	2290, 2682
Eco130I	CCWWGG	4 cut(s)	714, 1038, 1146, 1790
Eco147I	AGGCCT	2 cut(s)	1470, 1878
Eco24I	GRGCYC	5 cut(s)	758, 933, 1958, 2292, 2684
Eco31I	GGTCTC	4 cut(s)	282, 837, 2477, 2945
Eco47I	GGWCC	4 cut(s)	1064, 1433, 1507, 2609
Eco47III	AGCGCT	1 cut(s)	2465
Eco53kI	GAGCTC	2 cut(s)	2290, 2682
Eco57I	CTGAAG	2 cut(s)	1013, 1173
Eco88I	CYCGRG	5 cut(s)	932, 1880, 2234, 2285, 2360
Eco91I	GGTNACC	1 cut(s)	1629
EcoICRI	GAGCTC	2 cut(s)	2290, 2682
EcoO109I	RGGNCCY	1 cut(s)	1064
EcoO65I	GGTNACC	1 cut(s)	1629
EcoRII	CCWGG	7 cut(s)	46, 208, 244, 317, 802, 2077, 2202
EcoT14I	CCWWGG	4 cut(s)	714, 1038, 1146, 1790
EcoT38I	GRGCYC	5 cut(s)	758, 933, 1958, 2292, 2684
ErhI	CCWWGG	4 cut(s)	714, 1038, 1146, 1790
Esp3I	CGTCTC	2 cut(s)	1800, 2815
FaqI	GGGAC	5 cut(s)	551, 843, 1050, 1680, 2429
FauI	CCCGC	4 cut(s)	919, 920, 2364, 2455
FauNDI	CATATG	3 cut(s)	846, 1590, 2830
FbaI	TGATCA	3 cut(s)	838, 1926, 1939
FblI	GTMKAC	2 cut(s)	1005, 1085
FokI	GGATG	9 cut(s)	425, 545, 855, 1109, 1220, 2059, 2416, 2441, 2812
FriOI	GRGCYC	5 cut(s)	758, 933, 1958, 2292, 2684
GlaI	GCGC	5 cut(s)	472, 878, 1397, 2255, 2465
GsaI	CCCAGC	4 cut(s)	109, 520, 703, 1989
GsuI	CTGGAG	2 cut(s)	351, 1407
HaeII	RGCGCY	3 cut(s)	474, 1399, 2467
HapII	CCGG	8 cut(s)	441, 474, 509, 660, 904, 1077, 1107, 1277
HgaI	GACGC	2 cut(s)	652, 1860
HhaI	GCGC	5 cut(s)	473, 879, 1398, 2256, 2466
Hin1I	GRCGYC	1 cut(s)	663
Hin6I	GCGC	5 cut(s)	471, 877, 1396, 2254, 2464
HinP1I	GCGC	5 cut(s)	471, 877, 1396, 2254, 2464
HincII	GTYRAC	2 cut(s)	1086, 1420
HindII	GTYRAC	2 cut(s)	1086, 1420
HindIII	AAGCTT	1 cut(s)	974
HpaII	CCGG	8 cut(s)	441, 474, 509, 660, 904, 1077, 1107, 1277
HphI	GGTGA	7 cut(s)	970, 1373, 1537, 1544, 1623, 2371, 2398
Hpy166II	GTNNAC	9 cut(s)	681, 1006, 1086, 1420, 1510, 1678, 1919, 2022, 2572
Hpy188I	TCNGA	9 cut(s)	21, 141, 339, 1347, 1738, 2109, 2163, 2859, 2876
Hpy8I	GTNNAC	9 cut(s)	681, 1006, 1086, 1420, 1510, 1678, 1919, 2022, 2572
Hpy99I	CGWCG	7 cut(s)	56, 125, 668, 697, 1090, 1457, 1854
HpyAV	CCTTC	6 cut(s)	110, 768, 1150, 2236, 2461, 2828
HpyCH4IV	ACGT	5 cut(s)	1088, 1641, 1771, 1809, 2808
HpyF3I	CTNAG	9 cut(s)	20, 188, 297, 655, 731, 1290, 1761, 2390, 2683
HpySE526I	ACGT	5 cut(s)	1088, 1641, 1771, 1809, 2808
Hsp92I	GRCGYC	1 cut(s)	663
HspAI	GCGC	5 cut(s)	471, 877, 1396, 2254, 2464
KflI	GGGWCCC	1 cut(s)	1064
KpnI	GGTACC	1 cut(s)	2895
KroI	GCCGGC	1 cut(s)	659
KroNI	GCCGGC	1 cut(s)	661
Ksp22I	TGATCA	3 cut(s)	838, 1926, 1939
KspI	CCGCGG	1 cut(s)	2608
LguI	GCTCTTC	1 cut(s)	2297
LmnI	GCTCC	7 cut(s)	468, 598, 615, 1017, 1953, 2562, 2607
Lsp1109I	GCAGC	7 cut(s)	204, 211, 372, 592, 811, 1243, 2551
LweI	GCATC	5 cut(s)	1056, 2043, 2081, 2385, 2428
MaeII	ACGT	5 cut(s)	1088, 1641, 1771, 1809, 2808
MaeIII	GTNAC	7 cut(s)	9, 436, 958, 1279, 1629, 2132, 2708
MbiI	CCGCTC	1 cut(s)	2489
MfeI	CAATTG	3 cut(s)	609, 1574, 1695
MflI	RGATCY	4 cut(s)	582, 2044, 2244, 3018
MhlI	GDGCHC	9 cut(s)	714, 758, 903, 933, 1489, 1958, 2292, 2684, 2694
MlsI	TGGCCA	3 cut(s)	317, 1611, 2339
MluCI	AATT	9 cut(s)	64, 307, 609, 1176, 1574, 1695, 2086, 2213, 2913
MluNI	TGGCCA	3 cut(s)	317, 1611, 2339
MlyI	GAGTC	7 cut(s)	151, 1174, 1413, 1469, 1699, 1755, 2007
MmeI	TCCRAC	4 cut(s)	119, 398, 2457, 2981
Mox20I	TGGCCA	3 cut(s)	317, 1611, 2339
MroNI	GCCGGC	1 cut(s)	659
MscI	TGGCCA	3 cut(s)	317, 1611, 2339
MseI	TTAA	5 cut(s)	1131, 1179, 2030, 2333, 2597
MslI	CAYNNNNRTG	2 cut(s)	1055, 2130
Msp20I	TGGCCA	3 cut(s)	317, 1611, 2339
MspA1I	CMGCKG	1 cut(s)	2607
MspI	CCGG	8 cut(s)	441, 474, 509, 660, 904, 1077, 1107, 1277
MunI	CAATTG	3 cut(s)	609, 1574, 1695
MvaI	CCWGG	7 cut(s)	48, 210, 246, 319, 804, 2079, 2204
MvnI	CGCG	4 cut(s)	879, 1854, 2481, 2607
NaeI	GCCGGC	1 cut(s)	661
NciI	CCSGG	3 cut(s)	475, 510, 1108
NdeI	CATATG	3 cut(s)	846, 1590, 2830
NgoMIV	GCCGGC	1 cut(s)	659
NheI	GCTAGC	2 cut(s)	565, 2525
NmeAIII	GCCGAG	4 cut(s)	853, 1308, 1427, 1635
NmuCI	GTSAC	5 cut(s)	436, 958, 1279, 1629, 2132
NruI	TCGCGA	1 cut(s)	2481
NspI	RCATGY	2 cut(s)	739, 1925
OliI	CACNNNNGTG	2 cut(s)	1055, 2130
PaeR7I	CTCGAG	2 cut(s)	932, 1880
PceI	AGGCCT	2 cut(s)	1470, 1878
PciI	ACATGT	1 cut(s)	1921
PciSI	GCTCTTC	1 cut(s)	2297
PcsI	WCGNNNNNNNCGW	1 cut(s)	1858
PdiI	GCCGGC	1 cut(s)	661
PfeI	GAWTC	4 cut(s)	1318, 1569, 2848, 3042
PflFI	GACNNNGTC	1 cut(s)	2956
PflMI	CCANNNNNTGG	1 cut(s)	2203
PinAI	ACCGGT	1 cut(s)	440
PleI	GAGTC	7 cut(s)	150, 1173, 1412, 1469, 1698, 1754, 2006
PpsI	GAGTC	7 cut(s)	150, 1173, 1412, 1469, 1698, 1754, 2006
Ppu21I	YACGTR	1 cut(s)	1772
PpuMI	RGGWCCY	1 cut(s)	1064
PscI	ACATGT	1 cut(s)	1921
PsiI	TTATAA	1 cut(s)	1962
Psp124BI	GAGCTC	2 cut(s)	2292, 2684
Psp5II	RGGWCCY	1 cut(s)	1064
Psp6I	CCWGG	7 cut(s)	46, 208, 244, 317, 802, 2077, 2202
PspEI	GGTNACC	1 cut(s)	1629
PspFI	CCCAGC	4 cut(s)	105, 516, 699, 1985
PspGI	CCWGG	7 cut(s)	46, 208, 244, 317, 802, 2077, 2202
PspPI	GGNCC	8 cut(s)	764, 794, 1064, 1074, 1274, 1433, 1507, 2609
PspPPI	RGGWCCY	1 cut(s)	1064
PspXI	VCTCGAGB	1 cut(s)	932
PstI	CTGCAG	1 cut(s)	2569
PsuI	RGATCY	4 cut(s)	582, 2044, 2244, 3018
PsyI	GACNNNGTC	1 cut(s)	2956
RruI	TCGCGA	1 cut(s)	2481
RsaI	GTAC	7 cut(s)	427, 445, 688, 1703, 1774, 1918, 2893
RsaNI	GTAC	7 cut(s)	426, 444, 687, 1702, 1773, 1917, 2892
RseI	CAYNNNNRTG	2 cut(s)	1055, 2130
SacI	GAGCTC	2 cut(s)	2292, 2684
SacII	CCGCGG	1 cut(s)	2608
SalI	GTCGAC	1 cut(s)	1084
SapI	GCTCTTC	1 cut(s)	2297
SaqAI	TTAA	5 cut(s)	1131, 1179, 2030, 2333, 2597
Sau96I	GGNCC	8 cut(s)	764, 794, 1064, 1074, 1274, 1433, 1507, 2609
SchI	GAGTC	7 cut(s)	151, 1174, 1413, 1469, 1699, 1755, 2007
SduI	GDGCHC	9 cut(s)	714, 758, 903, 933, 1489, 1958, 2292, 2684, 2694
SfaNI	GCATC	5 cut(s)	1056, 2043, 2081, 2385, 2428
SfcI	CTRYAG	1 cut(s)	2565
Sfr274I	CTCGAG	2 cut(s)	932, 1880
Sfr303I	CCGCGG	1 cut(s)	2608
SgrBI	CCGCGG	1 cut(s)	2608
SinI	GGWCC	4 cut(s)	1064, 1433, 1507, 2609
SlaI	CTCGAG	2 cut(s)	932, 1880
SmiMI	CAYNNNNRTG	2 cut(s)	1055, 2130
SmlI	CTYRAG	5 cut(s)	932, 1880, 2048, 2299, 2370
SmoI	CTYRAG	5 cut(s)	932, 1880, 2048, 2299, 2370
SpeI	ACTAGT	3 cut(s)	433, 1481, 1913
Sse9I	AATT	9 cut(s)	64, 307, 609, 1176, 1574, 1695, 2086, 2213, 2913
SseBI	AGGCCT	2 cut(s)	1470, 1878
SspI	AATATT	1 cut(s)	2789
SstI	GAGCTC	2 cut(s)	2292, 2684
StuI	AGGCCT	2 cut(s)	1470, 1878
StyI	CCWWGG	4 cut(s)	714, 1038, 1146, 1790
TaiI	ACGT	5 cut(s)	1091, 1644, 1774, 1812, 2811
TasI	AATT	9 cut(s)	64, 307, 609, 1176, 1574, 1695, 2086, 2213, 2913
TatI	WGTACW	1 cut(s)	1916
TauI	GCSGC	7 cut(s)	391, 401, 481, 1401, 1900, 2259, 2717
TfiI	GAWTC	4 cut(s)	1318, 1569, 2848, 3042
Tru1I	TTAA	5 cut(s)	1131, 1179, 2030, 2333, 2597
Tru9I	TTAA	5 cut(s)	1131, 1179, 2030, 2333, 2597
TseFI	GTSAC	5 cut(s)	436, 958, 1279, 1629, 2132
TseI	GCWGC	7 cut(s)	192, 224, 385, 605, 824, 1256, 2564
Tsp45I	GTSAC	5 cut(s)	436, 958, 1279, 1629, 2132
TspGWI	ACGGA	3 cut(s)	595, 681, 1446
Tth111I	GACNNNGTC	1 cut(s)	2956
Van91I	CCANNNNNTGG	1 cut(s)	2203
VpaK11BI	GGWCC	4 cut(s)	1064, 1433, 1507, 2609
XapI	RAATTY	2 cut(s)	2213, 2913
XceI	RCATGY	2 cut(s)	739, 1925
XcmI	CCANNNNNNNNNTGG	3 cut(s)	598, 1739, 2701
XhoI	CTCGAG	2 cut(s)	932, 1880
XmaJI	CCTAGG	1 cut(s)	1790
XmiI	GTMKAC	2 cut(s)	1005, 1085

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.