Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0015635

Physical Location & Seq

Genomic Coordinates Forward (+)

26302500 .. 26305449

Gene Structure 2950 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00238110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGCTCATCGTCCCAATGACCATCCTCGGCGCGAGACAGTGATCGATATAGGGGGCCGGAAGCCCGCAAACTTCACTGGCGGGCTCGAGTTTTCGAGCCTCACATACACGGTGACAAAGAATATCAAGCTTGATGGGAAATGGCTGAAGCAAGATGTAGACTTGCTCCACAAGATCACAGGTTTTGCACCCAAGGGTTGCATCACGGCTGTGATGGGTCCCAGTGGGGCCGGAAAATCGACGTTCTTGGATGGAGTTGCCGGGAGAATAGCGAGTGGAAGTCTTAAAGGGAGAGTGTCCTTGGACGGGAAGGAAATGAGTCCTAGCATAATTAAGAGGACTTCAGCTTATATTATGCAGGATGATAGGCTTTTCCCAACCCTTACAGTCTATGAGACTTTGATGTTCGCTGCTGATTTTAGGTTGGGGCCGGTCACAACTACTGAGAAGAAACAGCGTGTTGAAAAGTTGATTCAACAGCTCGGCTTATCGTCAGCTCGGAACACTTACATAGGTGATGAGGGCAGTCGAGGAGTGTCCGGAGGAGAGCGCCGCCGAGTCTCTATTGGTGTTGACATCATTCACGGACCTGCCCTCCTCTTCCTCGACGAGCCAACATCAGGCCTAGACTCCACTAGTGCTCACAGTGTTATCGAAAAGGTCCACCACATTGCACGCTCTGGAAGCACTGTGATCCTCACCATTCACCAGCCCTCGTCAAGAATCCAATTGCTTCTCGATCATATGCTTATCCTAGCTCGTGGCCAGCTCATGTATCAGGGGTCACCGAAAGACGTGTCTCTTCATCTCGGCCGAATGGGACGGAAAGTCCACAAAGAGGAGAGTCCAATTGAGTATCTCATTGATGTTATTCAGGAATATGATCAATCCGAACATGGAGTCGAGGCACTCGCTGAGTTTGCACGTACAGGTGTTAAACCCCCTAGGTTGATTGAGGGAGACGTGTCGATTTCAACCATTCTCCCCACCCCAACTCCTCCACGACGCGGTGGCCGTGGGAATGATTTAGGCCTCGAGAAGAATGGAAAGCGGCTTCCTTTGCAGACTAGTACACATGTGATCAATGATTTTGATCATAGTTTGAGGAGCCCTTATAACACTTCGAGGTCATGGACTGCTGGGAATAGTGGAGTCATGGACACACTTCACAGGTTTACTCCTTTAAGGAAACCTAAAGATATCAAGATGCTAAGCCCCATGAGTGCATCCCCTGGCTACAATTATTCAAGTGAGATCATTCAGAGCACACCAACACCACACAGCAGTGACTACACAGTAAATGAAAACGACTATCTGACCCCTGATTATGATCCAAATGCCTCTTCCCACCACAACCTGGCACCCAAATTTGCCAACTCCTTCTTCCCTGAGACATGGATCCTCATGCGCCGCAACTTCATAAACATTCGCAGAACACCCGAGCTCTTCCTCTCAAGGCTCGTAGTCCTTACATTCATGGGCTTCTTAATGGCCACCATGTTCAAGAACCCGCCCGAGAACGCTCAAGGCATCACCAACCGCCTCAGTTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCATCCAACGATGCTGTCCCCGCCTTCATCCAAGAGCGCTTCATCTTTGTTCGGGAGACCGCTCACAATGCCTACCGAGCCTCCTCTTACACCATAGCTGGCCTAATCACTTACCTACCTTTTCTTGCGCTCCAAGCTGCAGTTTACGCAGGTATTGTCTGGTTTGCCCTAAAGCTCCGCGGACCCTTCCTCTACTTCTTGGTCGTCCTCTATGTCTCTCTCCTCTCTACAAACTCGTTTGTGGTGTTTGTGAGCTCAGTTGTGCCCAACTACATCTTGGGTTATGCCGCGGTCATTGCTTTCACTGCTCTCTTCTTCTTGTTCTGTGGATACTTCTTGAACAGTCATGACATTCCTAAATATTGGAAGTGGATGAACTACGTCTCCACCATGACATACCCATATGAAGGTTTGATAATGAATCAATATCAGACTCATCTTCCTTTCGGACAAAATCCAAATGGTAGCAACATTACTGGTTTTCAAATTTTGGACAGTCTTCATATAAACTATGGAGGAGGCGAGACCCTGTCTTCGGCGAAGAAGTGGGAGAAGATTTACATAATGTTGGGTTGGACTGTCCTGTATAGGATCTTGTTTTACTTGGTCATTCGATTCTTCTCCAAGAACCAGAGGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022804 GO:0022857 GO:0030198 GO:0031224 GO:0032501 GO:0032502 GO:0032989 GO:0042623 GO:0042626 GO:0043062 GO:0043492 GO:0044085 GO:0044425 GO:0044464 GO:0045229 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

740

Amino Acids

83.0

Weight (kDa)

9.4

Isoelectric Point (pI)

42.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	61 - 207	1.2e-25	ABC transporter
ABC2_membrane	PF01061	464 - 670	1.6e-41	ABC-2 type transporter
ABC2_membrane_3	PF12698	508 - 727	9.1e-07	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015635)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g29080
malus_domestica	MD01G1044600.v1.1 MD15G1306900.v1.1
prunus_persica	Prupe.6G208600_v2.0.a1
pyrus_communis	pycom15g27090
rosa_chinensis	RchiOBHm_Chr7g0221691
rosa_laevigata	RLG00000002137 RLG00000002338
rosa_multiflora	Rmu_sc0002824.1_g000008
rosa_roxburghii	Rroxscaffold_3G00238110
rosa_rugosa	Rorug07G0203000
rosa_samantha	Rh7AG343700 Rh7BG333800 Rh7CG361100 Rh7DG341400
rosa_wichuraiana	Rw7G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1116
Acc36I	ACCTGC	2 cut(s)	598, 1721
AccB1I	GGYRCC	1 cut(s)	1360
AccB7I	CCANNNNNTGG	1 cut(s)	1357
AccBSI	CCGCTC	1 cut(s)	1643
AccI	GTMKAC	1 cut(s)	159
AccII	CGCG	4 cut(s)	33, 1008, 1761, 1871
AccIII	TCCGGA	1 cut(s)	539
AclWI	GGATC	5 cut(s)	688, 1325, 1393, 1406, 2180
AcoI	YGGCCR	4 cut(s)	763, 811, 1012, 1491
AcsI	RAATTY	2 cut(s)	1367, 2067
AcuI	CTGAAG	2 cut(s)	167, 327
AfaI	GTAC	2 cut(s)	928, 1072
AfeI	AGCGCT	1 cut(s)	1619
AfiI	CCNNNNNNNGG	7 cut(s)	306, 620, 838, 1007, 1357, 1988, 2116
AflIII	ACRYGT	3 cut(s)	795, 963, 1075
AgsI	TTSAA	7 cut(s)	464, 476, 975, 1248, 1504, 1921, 2066
AhdI	GACNNNNNGTC	1 cut(s)	827
AhlI	ACTAGT	2 cut(s)	635, 1067
AjiI	CACGTC	2 cut(s)	796, 964
AjnI	CCWGG	2 cut(s)	1231, 1356
AjuI	GAANNNNNNNTTGG	4 cut(s)	1327, 1359, 1367, 1399
AleI	CACNNNNGTG	2 cut(s)	209, 1284
AloI	GAACNNNNNNTCC	2 cut(s)	1949, 1981
Alw21I	GWGCWC	4 cut(s)	643, 1268, 1446, 1838
AlwI	GGATC	5 cut(s)	688, 1325, 1393, 1406, 2180
Ama87I	CYCGRG	4 cut(s)	86, 1034, 1439, 1514
Aor13HI	TCCGGA	1 cut(s)	539
Aor51HI	AGCGCT	1 cut(s)	1619
ApeKI	GCWGC	2 cut(s)	410, 1718
ApoI	RAATTY	2 cut(s)	1367, 2067
ArsI	GACNNNNNNTTYG	6 cut(s)	782, 814, 885, 917, 2098, 2130
AspA2I	CCTAGG	1 cut(s)	944
AspLEI	GCGC	5 cut(s)	33, 552, 1410, 1620, 1711
AspS9I	GGNCC	7 cut(s)	55, 218, 228, 428, 587, 661, 1763
AsuC2I	CCSGG	1 cut(s)	262
AsuHPI	GGTGA	7 cut(s)	124, 527, 691, 698, 777, 1525, 1552
AvaI	CYCGRG	4 cut(s)	86, 1034, 1439, 1514
AvaII	GGWCC	4 cut(s)	218, 587, 661, 1763
AvrII	CCTAGG	1 cut(s)	944
BaeGI	GKGCMC	1 cut(s)	1848
BalI	TGGCCA	2 cut(s)	765, 1493
BamHI	GGATCC	1 cut(s)	1398
BanI	GGYRCC	1 cut(s)	1360
BanII	GRGCYC	4 cut(s)	87, 1112, 1446, 1838
BauI	CACGAG	1 cut(s)	759
BbsI	GAAGAC	2 cut(s)	2072, 2106
Bbv12I	GWGCWC	4 cut(s)	643, 1268, 1446, 1838
BbvI	GCAGC	2 cut(s)	397, 1705
BccI	CCATC	4 cut(s)	30, 128, 208, 245
BceAI	ACGGC	2 cut(s)	222, 999
BciT130I	CCWGG	2 cut(s)	1233, 1358
BciVI	GTATCC	1 cut(s)	1904
BclI	TGATCA	3 cut(s)	883, 1080, 1093
BcnI	CCSGG	1 cut(s)	262
BcuI	ACTAGT	2 cut(s)	635, 1067
BfaI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068
BfmI	CTRYAG	1 cut(s)	1719
BfoI	RGCGCY	2 cut(s)	553, 1621
BfuAI	ACCTGC	2 cut(s)	598, 1721
BfuI	GTATCC	1 cut(s)	1904
BisI	GCNGC	6 cut(s)	411, 553, 1052, 1411, 1719, 1869
BlnI	CCTAGG	1 cut(s)	944
BlpI	GCTNAGC	1 cut(s)	1211
BlsI	GCNGC	6 cut(s)	412, 554, 1053, 1412, 1720, 1870
Bme1390I	CCNGG	3 cut(s)	262, 1233, 1358
Bme18I	GGWCC	4 cut(s)	218, 587, 661, 1763
BmeRI	GACNNNNNGTC	1 cut(s)	827
BmeT110I	CYCGRG	4 cut(s)	86, 1034, 1439, 1514
BmgT120I	GGNCC	7 cut(s)	55, 218, 228, 428, 587, 661, 1763
BmiI	GGNNCC	9 cut(s)	56, 219, 220, 229, 429, 1109, 1362, 1400, 1765
BmrFI	CCNGG	3 cut(s)	262, 1233, 1358
BmrI	ACTGGG	1 cut(s)	216
BmsI	GCATC	5 cut(s)	210, 1197, 1235, 1539, 1582
BmuI	ACTGGG	1 cut(s)	216
BpiI	GAAGAC	2 cut(s)	2072, 2106
Bpu1102I	GCTNAGC	1 cut(s)	1211
BpuEI	CTTGAG	2 cut(s)	1438, 1509
BpuMI	CCSGG	1 cut(s)	262
Bsa29I	ATCGAT	1 cut(s)	45
BsaAI	YACGTR	1 cut(s)	926
BsaBI	GATNNNNATC	2 cut(s)	1092, 1329
BsaI	GGTCTC	2 cut(s)	1631, 2099
BsaJI	CCNNGG	8 cut(s)	26, 192, 300, 944, 1015, 1231, 1759, 1869
BsaWI	WCCGGW	1 cut(s)	539
BsaXI	ACNNNNNCTCC	8 cut(s)	579, 609, 979, 1009, 1646, 1676, 1949, 1979
Bsc4I	CCNNNNNNNGG	7 cut(s)	306, 620, 838, 1007, 1357, 1988, 2116
Bse118I	RCCGGY	1 cut(s)	430
Bse1I	ACTGG	3 cut(s)	82, 222, 2062
Bse3DI	GCAATG	2 cut(s)	669, 1875
Bse8I	GATNNNNATC	2 cut(s)	1092, 1329
BseAI	TCCGGA	1 cut(s)	539
BseBI	CCWGG	2 cut(s)	1233, 1358
BseCI	ATCGAT	1 cut(s)	45
BseDI	CCNNGG	8 cut(s)	26, 192, 300, 944, 1015, 1231, 1759, 1869
BseGI	GGATG	7 cut(s)	22, 256, 367, 1226, 1583, 1608, 1959
BseJI	GATNNNNATC	2 cut(s)	1092, 1329
BseLI	CCNNNNNNNGG	7 cut(s)	306, 620, 838, 1007, 1357, 1988, 2116
BseMI	GCAATG	2 cut(s)	669, 1875
BseMII	CTCAG	5 cut(s)	435, 906, 1380, 1558, 1851
BseNI	ACTGG	3 cut(s)	82, 222, 2062
BseRI	GAGGAG	9 cut(s)	546, 558, 587, 854, 987, 1120, 1654, 1793, 2112
BseSI	GKGCMC	1 cut(s)	1848
BseX3I	CGGCCG	1 cut(s)	811
BseXI	GCAGC	2 cut(s)	397, 1705
BseYI	CCCAGC	1 cut(s)	1139
Bsh1236I	CGCG	4 cut(s)	33, 1008, 1761, 1871
Bsh1285I	CGRYCG	1 cut(s)	814
BshNI	GGYRCC	1 cut(s)	1360
BshVI	ATCGAT	1 cut(s)	45
BsiEI	CGRYCG	1 cut(s)	814
BsiHKAI	GWGCWC	4 cut(s)	643, 1268, 1446, 1838
BsiHKCI	CYCGRG	4 cut(s)	86, 1034, 1439, 1514
BsiSI	CCGG	5 cut(s)	58, 231, 261, 431, 540
BslFI	GGGAC	3 cut(s)	204, 834, 1583
BslI	CCNNNNNNNGG	7 cut(s)	306, 620, 838, 1007, 1357, 1988, 2116
BsmBI	CGTCTC	2 cut(s)	954, 1969
BsmFI	GGGAC	3 cut(s)	204, 834, 1583
Bso31I	GGTCTC	2 cut(s)	1631, 2099
BsoBI	CYCGRG	4 cut(s)	86, 1034, 1439, 1514
Bsp1286I	GDGCHC	7 cut(s)	87, 643, 1112, 1268, 1446, 1838, 1848
Bsp13I	TCCGGA	1 cut(s)	539
Bsp1720I	GCTNAGC	1 cut(s)	1211
BspCNI	CTCAG	5 cut(s)	436, 907, 1381, 1557, 1850
BspDI	ATCGAT	1 cut(s)	45
BspEI	TCCGGA	1 cut(s)	539
BspFNI	CGCG	4 cut(s)	33, 1008, 1761, 1871
BspHI	TCATGA	1 cut(s)	1927
BspLI	GGNNCC	9 cut(s)	56, 219, 220, 229, 429, 1109, 1362, 1400, 1765
BspMAI	CTGCAG	1 cut(s)	1723
BspMI	ACCTGC	2 cut(s)	598, 1721
BspPI	GGATC	5 cut(s)	688, 1325, 1393, 1406, 2180
BspQI	GCTCTTC	1 cut(s)	1451
BspT107I	GGYRCC	1 cut(s)	1360
BspTNI	GGTCTC	2 cut(s)	1631, 2099
BsrBI	CCGCTC	1 cut(s)	1643
BsrDI	GCAATG	2 cut(s)	669, 1875
BsrFI	RCCGGY	1 cut(s)	430
BsrI	ACTGG	3 cut(s)	82, 222, 2062
BssAI	RCCGGY	1 cut(s)	430
BssECI	CCNNGG	8 cut(s)	26, 192, 300, 944, 1015, 1231, 1759, 1869
BssSI	CACGAG	1 cut(s)	759
BssT1I	CCWWGG	3 cut(s)	192, 300, 944
Bst2BI	CACGAG	1 cut(s)	759
Bst2UI	CCWGG	2 cut(s)	1233, 1358
Bst6I	CTCTTC	6 cut(s)	605, 807, 1348, 1451, 1577, 1898
BstBAI	YACGTR	1 cut(s)	926
BstC8I	GCNNGC	5 cut(s)	66, 83, 676, 767, 1681
BstDEI	CTNAG	6 cut(s)	444, 915, 1211, 1389, 1544, 1837
BstDSI	CCRYGG	3 cut(s)	1015, 1759, 1869
BstEII	GGTNACC	1 cut(s)	783
BstF5I	GGATG	7 cut(s)	22, 256, 367, 1226, 1583, 1608, 1959
BstFNI	CGCG	4 cut(s)	33, 1008, 1761, 1871
BstH2I	RGCGCY	2 cut(s)	553, 1621
BstHHI	GCGC	5 cut(s)	33, 552, 1410, 1620, 1711
BstMCI	CGRYCG	1 cut(s)	814
BstNI	CCWGG	2 cut(s)	1233, 1358
BstNSI	RCATGY	1 cut(s)	1079
BstPI	GGTNACC	1 cut(s)	783
BstSCI	CCNGG	3 cut(s)	260, 1231, 1356
BstSFI	CTRYAG	1 cut(s)	1719
BstSLI	GKGCMC	1 cut(s)	1848
BstUI	CGCG	4 cut(s)	33, 1008, 1761, 1871
BstV1I	GCAGC	2 cut(s)	397, 1705
BstV2I	GAAGAC	2 cut(s)	2072, 2106
BstX2I	RGATCY	2 cut(s)	1398, 2172
BstYI	RGATCY	2 cut(s)	1398, 2172
BstZI	CGGCCG	1 cut(s)	811
Bsu15I	ATCGAT	1 cut(s)	45
BsuI	GTATCC	1 cut(s)	1904
BsuTUI	ATCGAT	1 cut(s)	45
BtgI	CCRYGG	3 cut(s)	1015, 1759, 1869
BtrI	CACGTC	2 cut(s)	796, 964
BtsCI	GGATG	7 cut(s)	22, 256, 367, 1226, 1583, 1608, 1959
BtsI	GCAGTG	2 cut(s)	1291, 1884
BtsIMutI	CAGTG	7 cut(s)	45, 75, 229, 652, 687, 1291, 1884
BveI	ACCTGC	2 cut(s)	598, 1721
Cac8I	GCNNGC	5 cut(s)	66, 83, 676, 767, 1681
CciI	TCATGA	1 cut(s)	1927
CfoI	GCGC	5 cut(s)	33, 552, 1410, 1620, 1711
Cfr10I	RCCGGY	1 cut(s)	430
Cfr13I	GGNCC	7 cut(s)	55, 218, 228, 428, 587, 661, 1763
Cfr42I	CCGCGG	2 cut(s)	1762, 1872
ClaI	ATCGAT	1 cut(s)	45
CseI	GACGC	1 cut(s)	1014
Csp6I	GTAC	2 cut(s)	927, 1071
CviQI	GTAC	2 cut(s)	927, 1071
DdeI	CTNAG	6 cut(s)	444, 915, 1211, 1389, 1544, 1837
DriI	GACNNNNNGTC	1 cut(s)	827
EaeI	YGGCCR	4 cut(s)	763, 811, 1012, 1491
EagI	CGGCCG	1 cut(s)	811
Eam1104I	CTCTTC	6 cut(s)	605, 807, 1348, 1451, 1577, 1898
Eam1105I	GACNNNNNGTC	1 cut(s)	827
EarI	CTCTTC	6 cut(s)	605, 807, 1348, 1451, 1577, 1898
Ecl136II	GAGCTC	2 cut(s)	1444, 1836
EclXI	CGGCCG	1 cut(s)	811
Eco130I	CCWWGG	3 cut(s)	192, 300, 944
Eco147I	AGGCCT	2 cut(s)	624, 1032
Eco24I	GRGCYC	4 cut(s)	87, 1112, 1446, 1838
Eco31I	GGTCTC	2 cut(s)	1631, 2099
Eco32I	GATATC	1 cut(s)	1201
Eco47I	GGWCC	4 cut(s)	218, 587, 661, 1763
Eco47III	AGCGCT	1 cut(s)	1619
Eco52I	CGGCCG	1 cut(s)	811
Eco53kI	GAGCTC	2 cut(s)	1444, 1836
Eco57I	CTGAAG	2 cut(s)	167, 327
Eco88I	CYCGRG	4 cut(s)	86, 1034, 1439, 1514
Eco91I	GGTNACC	1 cut(s)	783
EcoICRI	GAGCTC	2 cut(s)	1444, 1836
EcoO109I	RGGNCCY	1 cut(s)	218
EcoO65I	GGTNACC	1 cut(s)	783
EcoRII	CCWGG	2 cut(s)	1231, 1356
EcoRV	GATATC	1 cut(s)	1201
EcoT14I	CCWWGG	3 cut(s)	192, 300, 944
EcoT38I	GRGCYC	4 cut(s)	87, 1112, 1446, 1838
ErhI	CCWWGG	3 cut(s)	192, 300, 944
Esp3I	CGTCTC	2 cut(s)	954, 1969
FaqI	GGGAC	3 cut(s)	204, 834, 1583
FauI	CCCGC	4 cut(s)	73, 74, 1518, 1609
FauNDI	CATATG	2 cut(s)	744, 1984
FbaI	TGATCA	3 cut(s)	883, 1080, 1093
FblI	GTMKAC	1 cut(s)	159
Fnu4HI	GCNGC	6 cut(s)	411, 553, 1052, 1411, 1719, 1869
FokI	GGATG	7 cut(s)	9, 263, 374, 1213, 1570, 1595, 1966
FriOI	GRGCYC	4 cut(s)	87, 1112, 1446, 1838
Fsp4HI	GCNGC	6 cut(s)	411, 553, 1052, 1411, 1719, 1869
FspBI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068
GlaI	GCGC	5 cut(s)	32, 551, 1409, 1619, 1710
GluI	GCNGC	6 cut(s)	411, 553, 1052, 1411, 1719, 1869
GsaI	CCCAGC	1 cut(s)	1143
HaeII	RGCGCY	2 cut(s)	553, 1621
HapII	CCGG	5 cut(s)	58, 231, 261, 431, 540
HgaI	GACGC	1 cut(s)	1014
HhaI	GCGC	5 cut(s)	33, 552, 1410, 1620, 1711
Hin6I	GCGC	5 cut(s)	31, 550, 1408, 1618, 1709
HinP1I	GCGC	5 cut(s)	31, 550, 1408, 1618, 1709
HincII	GTYRAC	1 cut(s)	574
HindII	GTYRAC	1 cut(s)	574
HindIII	AAGCTT	1 cut(s)	128
HpaII	CCGG	5 cut(s)	58, 231, 261, 431, 540
HphI	GGTGA	7 cut(s)	124, 527, 691, 698, 777, 1525, 1552
Hpy166II	GTNNAC	7 cut(s)	160, 574, 664, 832, 1073, 1176, 1726
Hpy188I	TCNGA	6 cut(s)	501, 892, 1263, 1317, 2013, 2030
Hpy8I	GTNNAC	7 cut(s)	160, 574, 664, 832, 1073, 1176, 1726
Hpy99I	CGWCG	3 cut(s)	244, 611, 1008
HpyAV	CCTTC	5 cut(s)	304, 1390, 1615, 1777, 1982
HpyCH4IV	ACGT	5 cut(s)	242, 795, 925, 963, 1962
HpyCH4V	TGCA	8 cut(s)	188, 201, 358, 674, 923, 1063, 1226, 1721
HpyF3I	CTNAG	6 cut(s)	444, 915, 1211, 1389, 1544, 1837
HpySE526I	ACGT	5 cut(s)	242, 795, 925, 963, 1962
HspAI	GCGC	5 cut(s)	31, 550, 1408, 1618, 1709
KflI	GGGWCCC	1 cut(s)	218
Kpn2I	TCCGGA	1 cut(s)	539
Ksp22I	TGATCA	3 cut(s)	883, 1080, 1093
KspI	CCGCGG	2 cut(s)	1762, 1872
LguI	GCTCTTC	1 cut(s)	1451
LmnI	GCTCC	4 cut(s)	171, 1107, 1716, 1761
Lsp1109I	GCAGC	2 cut(s)	397, 1705
LweI	GCATC	5 cut(s)	210, 1197, 1235, 1539, 1582
MaeI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068
MaeII	ACGT	5 cut(s)	242, 795, 925, 963, 1962
MaeIII	GTNAC	4 cut(s)	112, 433, 783, 1286
MbiI	CCGCTC	1 cut(s)	1643
MfeI	CAATTG	2 cut(s)	728, 849
MflI	RGATCY	2 cut(s)	1398, 2172
MhlI	GDGCHC	7 cut(s)	87, 643, 1112, 1268, 1446, 1838, 1848
MlsI	TGGCCA	2 cut(s)	765, 1493
MluCI	AATT	6 cut(s)	330, 728, 849, 1240, 1367, 2067
MluNI	TGGCCA	2 cut(s)	765, 1493
MlyI	GAGTC	7 cut(s)	328, 567, 623, 853, 909, 1161, 2008
MmeI	TCCRAC	2 cut(s)	1611, 2135
Mox20I	TGGCCA	2 cut(s)	765, 1493
MroI	TCCGGA	1 cut(s)	539
MscI	TGGCCA	2 cut(s)	765, 1493
MseI	TTAA	5 cut(s)	285, 333, 936, 1184, 1487
MslI	CAYNNNNRTG	2 cut(s)	209, 1284
Msp20I	TGGCCA	2 cut(s)	765, 1493
MspA1I	CMGCKG	2 cut(s)	1761, 1871
MspI	CCGG	5 cut(s)	58, 231, 261, 431, 540
MspR9I	CCNGG	3 cut(s)	262, 1233, 1358
MunI	CAATTG	2 cut(s)	728, 849
MvaI	CCWGG	2 cut(s)	1233, 1358
MvnI	CGCG	4 cut(s)	33, 1008, 1761, 1871
NciI	CCSGG	1 cut(s)	262
NdeI	CATATG	2 cut(s)	744, 1984
NlaIV	GGNNCC	9 cut(s)	56, 219, 220, 229, 429, 1109, 1362, 1400, 1765
NmeAIII	GCCGAG	4 cut(s)	7, 462, 581, 789
NmuCI	GTSAC	4 cut(s)	112, 433, 783, 1286
NspI	RCATGY	1 cut(s)	1079
OliI	CACNNNNGTG	2 cut(s)	209, 1284
PaeR7I	CTCGAG	2 cut(s)	86, 1034
PagI	TCATGA	1 cut(s)	1927
PceI	AGGCCT	2 cut(s)	624, 1032
PciI	ACATGT	1 cut(s)	1075
PciSI	GCTCTTC	1 cut(s)	1451
PcsI	WCGNNNNNNNCGW	1 cut(s)	1012
PfeI	GAWTC	4 cut(s)	472, 723, 2002, 2196
PflFI	GACNNNGTC	1 cut(s)	2110
PflMI	CCANNNNNTGG	1 cut(s)	1357
PkrI	GCNGC	6 cut(s)	412, 554, 1053, 1412, 1720, 1870
PleI	GAGTC	7 cut(s)	327, 566, 623, 852, 908, 1160, 2008
PpsI	GAGTC	7 cut(s)	327, 566, 623, 852, 908, 1160, 2008
Ppu21I	YACGTR	1 cut(s)	926
PpuMI	RGGWCCY	1 cut(s)	218
PscI	ACATGT	1 cut(s)	1075
PsiI	TTATAA	1 cut(s)	1116
Psp124BI	GAGCTC	2 cut(s)	1446, 1838
Psp5II	RGGWCCY	1 cut(s)	218
Psp6I	CCWGG	2 cut(s)	1231, 1356
PspEI	GGTNACC	1 cut(s)	783
PspFI	CCCAGC	1 cut(s)	1139
PspGI	CCWGG	2 cut(s)	1231, 1356
PspN4I	GGNNCC	9 cut(s)	56, 219, 220, 229, 429, 1109, 1362, 1400, 1765
PspPI	GGNCC	7 cut(s)	55, 218, 228, 428, 587, 661, 1763
PspPPI	RGGWCCY	1 cut(s)	218
PspXI	VCTCGAGB	1 cut(s)	86
PstI	CTGCAG	1 cut(s)	1723
PsuI	RGATCY	2 cut(s)	1398, 2172
PsyI	GACNNNGTC	1 cut(s)	2110
RsaI	GTAC	2 cut(s)	928, 1072
RsaNI	GTAC	2 cut(s)	927, 1071
RseI	CAYNNNNRTG	2 cut(s)	209, 1284
SacI	GAGCTC	2 cut(s)	1446, 1838
SacII	CCGCGG	2 cut(s)	1762, 1872
SapI	GCTCTTC	1 cut(s)	1451
SaqAI	TTAA	5 cut(s)	285, 333, 936, 1184, 1487
SatI	GCNGC	6 cut(s)	411, 553, 1052, 1411, 1719, 1869
Sau96I	GGNCC	7 cut(s)	55, 218, 228, 428, 587, 661, 1763
SchI	GAGTC	7 cut(s)	328, 567, 623, 853, 909, 1161, 2008
ScrFI	CCNGG	3 cut(s)	262, 1233, 1358
SduI	GDGCHC	7 cut(s)	87, 643, 1112, 1268, 1446, 1838, 1848
SfaNI	GCATC	5 cut(s)	210, 1197, 1235, 1539, 1582
SfcI	CTRYAG	1 cut(s)	1719
Sfr274I	CTCGAG	2 cut(s)	86, 1034
Sfr303I	CCGCGG	2 cut(s)	1762, 1872
SgrBI	CCGCGG	2 cut(s)	1762, 1872
SinI	GGWCC	4 cut(s)	218, 587, 661, 1763
SlaI	CTCGAG	2 cut(s)	86, 1034
SmiMI	CAYNNNNRTG	2 cut(s)	209, 1284
SmlI	CTYRAG	4 cut(s)	86, 1034, 1453, 1524
SmoI	CTYRAG	4 cut(s)	86, 1034, 1453, 1524
SpeI	ACTAGT	2 cut(s)	635, 1067
Sse9I	AATT	6 cut(s)	330, 728, 849, 1240, 1367, 2067
SseBI	AGGCCT	2 cut(s)	624, 1032
SspI	AATATT	1 cut(s)	1943
SspMI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068
SstI	GAGCTC	2 cut(s)	1446, 1838
StuI	AGGCCT	2 cut(s)	624, 1032
StyD4I	CCNGG	3 cut(s)	260, 1231, 1356
StyI	CCWWGG	3 cut(s)	192, 300, 944
TaiI	ACGT	5 cut(s)	245, 798, 928, 966, 1965
TasI	AATT	6 cut(s)	330, 728, 849, 1240, 1367, 2067
TatI	WGTACW	1 cut(s)	1070
TauI	GCSGC	4 cut(s)	555, 1054, 1413, 1871
TfiI	GAWTC	4 cut(s)	472, 723, 2002, 2196
Tru1I	TTAA	5 cut(s)	285, 333, 936, 1184, 1487
Tru9I	TTAA	5 cut(s)	285, 333, 936, 1184, 1487
TscAI	CASTG	7 cut(s)	45, 82, 229, 652, 694, 1291, 1891
TseFI	GTSAC	4 cut(s)	112, 433, 783, 1286
TseI	GCWGC	2 cut(s)	410, 1718
Tsp45I	GTSAC	4 cut(s)	112, 433, 783, 1286
TspGWI	ACGGA	2 cut(s)	600, 838
TspRI	CASTG	7 cut(s)	45, 82, 229, 652, 694, 1291, 1891
Tth111I	GACNNNGTC	1 cut(s)	2110
Van91I	CCANNNNNTGG	1 cut(s)	1357
VpaK11BI	GGWCC	4 cut(s)	218, 587, 661, 1763
XapI	RAATTY	2 cut(s)	1367, 2067
XceI	RCATGY	1 cut(s)	1079
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1855
XhoI	CTCGAG	2 cut(s)	86, 1034
XmaJI	CCTAGG	1 cut(s)	944
XmiI	GTMKAC	1 cut(s)	159
XspI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.