Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0012648

Physical Location & Seq

Genomic Coordinates Forward (+)

16387005 .. 16391038

Gene Structure 4034 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1060200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGCTCAGAACCATGAGAGGGTGCCAGAGAATCTGAGAAAACAGTTTGCTGTTGCTGTGAGGAGTATTAAGTGGAGCTATGCAATTTTCTGGTCCTTGTCAACTACACAACAAGGGGTGCTGGAATGGGGTGAAGGGTATTACAATGGAGACATCAAAACCCGAAAAACAGTTGAAGGTGTGGAAATTAAAACCGATAAAATGGGTTTACAGAGGAATGTGCAACTCAGAGAGCTGTATAAGTCTCTTCTAGACGGTGAGACTGAGGCTGAGCAGCAAGCTAAGGCGCCTTCTGCTGCATTGTCCCCGGAAGATCTCACAGATGCCGAGTGGTATTACTTGCTTTGCATGTCCTTCGTATTCAATCCTGGCGAAGGTTTGCCAGGAAGAGCACTGGCAACTGGGCAGACCATTTGGTTGTGCAATGCTCAACATGCAGATAGTAAAGTTTTCTCTCGCTCTTTGCTGGCGAAGAGTGCATCTGTTCAGACTGTAGTCTGCTTTCCCTACCTGGGGGGTGTCATTGAGCTAGGTGTGACTGAGCTGGTAATGGAGGACCTTAATCTCATTCAACACATCAAGGCTTCCTTACTAGATTTTTCAAAGCCCGATTGCTGTGAGAAATCTTGCTCTGCCCCTCATAAAGCAGACGATGATTCAGAGCAAATAGCTGCCAAGGTTGACCATGACGTAGTTGATACGTTGTATTTAGAGAACCTATATTCCCCTTCTGAAGAAATCAAATTTCATCACAGGGGAATTAACGATTTACATGGAAACCATGAAGAGGTCAACATAGACTCTCCTTATGGATGTTCTAATGGTTGTGATCACAATCATCAGACAGAAGACTCCATGATGCTTGAAGGTACCAATGCGGCTTCTCAGGTTCAGAGTTGGCACTTCATGGATGAAGACTTCAGCATTCAAGATTCCATGAATTCTAGTGACTGCATATCTGAAGCTTTTGTTAATCAAGGAAAGGCTCACTCTTCTGCTAAATGCAAGAATGCGAACCATGTCAATTTAAAGGAACTTCAAAACTTCAACGACACAAAACTAAGTTCCTTGGATCTCGAATCTGTTGATGAACATGTACACTACAAAAGAACTCTTTCTGCTCTTCTGGCAAGCTCAACGAAGTTGATTGAAAATCCATGTTTTTGCGACGGAGATTGCAAATCCAGTTTTATGAAATGGAAGAAAATAGTTGTTGGTGGTTGTAGGCCTACAGTACATCAGAAGATATTAAAGAAGATTCTGATCACGGTTCCTTTAATGTCTGGTGTTCGCTCTCCTAGGGCGATCGGAAAAGAAAATACGGAAAAAAATGTGTTCCCGAATTTGCAAGGTGACGATACTCGCAGGGAACATGATAAAATGAGAGAGAGTGAAAATTTGTTTGTCCTCAGGTCAATGGTTCCTTCTATCACTGAGGTTGATAAAGCTTCGATCCTTGATGATACGATCAAGTACTTGAAAGAGCTTGGGGCACGAGCGGAAGAGATGGAATCCTGCATGGACACCGTGGAAGTGATTGCTAGAAGGAAATTCCTGAACAGGGTAGAGAAGACATCAATCAACTATGATAAAACAAAGATGGACAGTGTGAAAAGGTCTTTATTAAACAAGAGAAAGGCCTGTGACATCGATGAAACTGACCCGTATCTCAATAGGCTTTTTCCCGGAGAAAGCTTGCCACTAGATGTGAAAGTGTGTGTAAAAGAGCAGGAGGTTCTGATAGAGATGAGATGCCCCTACCGGGAATATATCTTGCTTGATATAATGGATGCCATTAACAATCTGTACTTAGATGCACACTCTGTCCAATCATCCACCCTTGACGGTGTTCTCACGCTGAACCTTAAATCAAAGTTTCGAGGAGCGGCAATCTCACCAGTGGGGATGATTAAGCAGGCGCTTTGGAAAATTGCCGGCAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

649

Amino Acids

72.9

Weight (kDa)

5.65

Isoelectric Point (pI)

46.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	12 - 195	8.1e-53	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH-TF_ACT-like_plant	PF22754	569 - 645	5.6e-19	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012648)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g14230 FvH4_7g14230 FvH4_7g14230
malus_domestica	MD01G1060200.v1.1 MD07G1137500.v1.1
prunus_persica	Prupe.2G170100_v2.0.a1 Prupe.2G170100_v2.0.a1
pyrus_communis	pycom01g09030 pycom07g13540
rosa_chinensis	RchiOBHm_Chr1g0355211
rosa_laevigata	RLG00000028171
rosa_multiflora	Rmu_sc0003115.1_g000041
rosa_roxburghii	Rroxscaffold_4G00300600
rosa_rugosa	Rorug01G0245600
rosa_samantha	Rh1AG258000 Rh1BG227600 Rh1CG241700 Rh1DG255400
rosa_wichuraiana	Rw1G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	869
AccB1I	GGYRCC	3 cut(s)	22, 286, 869
AccBSI	CCGCTC	2 cut(s)	1499, 1886
AciI	CCGC	3 cut(s)	878, 1499, 1886
AclWI	GGATC	2 cut(s)	1080, 1447
AcsI	RAATTY	5 cut(s)	743, 940, 1342, 1396, 1550
AcuI	CTGAAG	3 cut(s)	753, 904, 981
AcyI	GRCGYC	1 cut(s)	287
AfaI	GTAC	5 cut(s)	871, 1098, 1236, 1475, 1808
AfiI	CCNNNNNNNGG	7 cut(s)	19, 374, 512, 513, 787, 1561, 1762
AflIII	ACRYGT	1 cut(s)	1093
AjnI	CCWGG	3 cut(s)	367, 382, 510
AloI	GAACNNNNNNTCC	2 cut(s)	707, 739
Alw21I	GWGCWC	1 cut(s)	394
Alw26I	GTCTC	3 cut(s)	144, 249, 254
AlwI	GGATC	2 cut(s)	1080, 1447
AoxI	GGCC	2 cut(s)	1226, 1638
ApeKI	GCWGC	3 cut(s)	274, 296, 671
ApoI	RAATTY	5 cut(s)	743, 940, 1342, 1396, 1550
Asp700I	GAANNNNTTC	1 cut(s)	1114
Asp718I	GGTACC	1 cut(s)	869
AspA2I	CCTAGG	1 cut(s)	1298
AspLEI	GCGC	2 cut(s)	289, 1921
AspS9I	GGNCC	2 cut(s)	93, 556
AsuC2I	CCSGG	3 cut(s)	308, 1686, 1763
AsuHPI	GGTGA	4 cut(s)	143, 269, 1364, 1887
AvaII	GGWCC	2 cut(s)	93, 556
AvrII	CCTAGG	1 cut(s)	1298
AxyI	CCTNAGG	1 cut(s)	1409
BaeGI	GKGCMC	1 cut(s)	1495
BanI	GGYRCC	3 cut(s)	22, 286, 869
BauI	CACGAG	1 cut(s)	1494
BbsI	GAAGAC	3 cut(s)	855, 921, 1577
Bbv12I	GWGCWC	1 cut(s)	394
BbvI	GCAGC	3 cut(s)	283, 286, 658
BccI	CCATC	2 cut(s)	1501, 1594
BcgI	CGANNNNNNTGC	2 cut(s)	337, 371
BciT130I	CCWGG	3 cut(s)	369, 384, 512
BclI	TGATCA	2 cut(s)	829, 1263
BcnI	CCSGG	3 cut(s)	308, 1686, 1763
BcoDI	GTCTC	3 cut(s)	144, 249, 254
BfaI	CTAG	7 cut(s)	251, 530, 593, 945, 1299, 1542, 1703
BfmI	CTRYAG	2 cut(s)	492, 1230
BfoI	RGCGCY	2 cut(s)	290, 1922
BglII	AGATCT	1 cut(s)	313
BisI	GCNGC	5 cut(s)	275, 297, 672, 879, 1887
BlnI	CCTAGG	1 cut(s)	1298
BlpI	GCTNAGC	1 cut(s)	270
BlsI	GCNGC	5 cut(s)	276, 298, 673, 880, 1888
BmcAI	AGTACT	1 cut(s)	1475
Bme1390I	CCNGG	6 cut(s)	308, 369, 384, 512, 1686, 1763
Bme18I	GGWCC	2 cut(s)	93, 556
BmgT120I	GGNCC	2 cut(s)	93, 556
BmiI	GGNNCC	5 cut(s)	24, 288, 871, 1272, 1422
BmrFI	CCNGG	6 cut(s)	308, 369, 384, 512, 1686, 1763
BmrI	ACTGGG	1 cut(s)	411
BmsI	GCATC	6 cut(s)	313, 488, 849, 1742, 1780, 1804
BmuI	ACTGGG	1 cut(s)	411
BoxI	GACNNNNGTC	1 cut(s)	494
BpiI	GAAGAC	3 cut(s)	855, 921, 1577
Bpu10I	CCTNAGC	1 cut(s)	282
Bpu1102I	GCTNAGC	1 cut(s)	270
BpuMI	CCSGG	3 cut(s)	308, 1686, 1763
Bsa29I	ATCGAT	1 cut(s)	1650
BsaBI	GATNNNNATC	2 cut(s)	834, 1262
BsaHI	GRCGYC	1 cut(s)	287
BsaJI	CCNNGG	6 cut(s)	306, 511, 675, 1068, 1298, 1527
Bsc4I	CCNNNNNNNGG	7 cut(s)	19, 374, 512, 513, 787, 1561, 1762
Bse118I	RCCGGY	1 cut(s)	1934
Bse1I	ACTGG	4 cut(s)	399, 406, 1185, 1898
Bse21I	CCTNAGG	1 cut(s)	1409
Bse3DI	GCAATG	1 cut(s)	430
Bse8I	GATNNNNATC	2 cut(s)	834, 1262
BseBI	CCWGG	3 cut(s)	369, 384, 512
BseCI	ATCGAT	1 cut(s)	1650
BseDI	CCNNGG	6 cut(s)	306, 511, 675, 1068, 1298, 1527
BseGI	GGATG	5 cut(s)	818, 916, 1795, 1832, 1911
BseJI	GATNNNNATC	2 cut(s)	834, 1262
BseLI	CCNNNNNNNGG	7 cut(s)	19, 374, 512, 513, 787, 1561, 1762
BseMI	GCAATG	1 cut(s)	430
BseMII	CTCAG	9 cut(s)	20, 26, 241, 255, 261, 531, 899, 1423, 1425
BseNI	ACTGG	4 cut(s)	399, 406, 1185, 1898
BseRI	GAGGAG	2 cut(s)	76, 1896
BseSI	GKGCMC	1 cut(s)	1495
BseXI	GCAGC	3 cut(s)	283, 286, 658
Bsh1285I	CGRYCG	1 cut(s)	1308
BshFI	GGCC	2 cut(s)	1228, 1640
BshNI	GGYRCC	3 cut(s)	22, 286, 869
BshVI	ATCGAT	1 cut(s)	1650
BsiEI	CGRYCG	1 cut(s)	1308
BsiHKAI	GWGCWC	1 cut(s)	394
BsiSI	CCGG	4 cut(s)	308, 1686, 1762, 1935
BslFI	GGGAC	1 cut(s)	289
BslI	CCNNNNNNNGG	7 cut(s)	19, 374, 512, 513, 787, 1561, 1762
BsmAI	GTCTC	3 cut(s)	144, 249, 254
BsmFI	GGGAC	1 cut(s)	289
BsmI	GAATGC	2 cut(s)	924, 1015
BsnI	GGCC	2 cut(s)	1228, 1640
Bsp1286I	GDGCHC	2 cut(s)	394, 1495
Bsp1407I	TGTACA	1 cut(s)	1096
Bsp143I	GATC	7 cut(s)	313, 829, 1072, 1263, 1305, 1452, 1467
Bsp1720I	GCTNAGC	1 cut(s)	270
BspACI	CCGC	3 cut(s)	878, 1499, 1886
BspANI	GGCC	2 cut(s)	1228, 1640
BspCNI	CTCAG	9 cut(s)	19, 27, 240, 256, 262, 532, 898, 1422, 1426
BspDI	ATCGAT	1 cut(s)	1650
BspLI	GGNNCC	5 cut(s)	24, 288, 871, 1272, 1422
BspPI	GGATC	2 cut(s)	1080, 1447
BspQI	GCTCTTC	2 cut(s)	382, 1128
BspT107I	GGYRCC	3 cut(s)	22, 286, 869
BsrBI	CCGCTC	2 cut(s)	1499, 1886
BsrDI	GCAATG	1 cut(s)	430
BsrFI	RCCGGY	1 cut(s)	1934
BsrGI	TGTACA	1 cut(s)	1096
BsrI	ACTGG	4 cut(s)	399, 406, 1185, 1898
BssAI	RCCGGY	1 cut(s)	1934
BssECI	CCNNGG	6 cut(s)	306, 511, 675, 1068, 1298, 1527
BssMI	GATC	7 cut(s)	313, 829, 1072, 1263, 1305, 1452, 1467
BssNI	GRCGYC	1 cut(s)	287
BssSI	CACGAG	1 cut(s)	1494
BssT1I	CCWWGG	3 cut(s)	675, 1068, 1298
Bst2BI	CACGAG	1 cut(s)	1494
Bst2UI	CCWGG	3 cut(s)	369, 384, 512
Bst4CI	ACNGT	9 cut(s)	45, 172, 257, 493, 1234, 1270, 1528, 1607, 1847
Bst6I	CTCTTC	7 cut(s)	252, 382, 467, 780, 997, 1128, 1497
BstACI	GRCGYC	1 cut(s)	287
BstAUI	TGTACA	1 cut(s)	1096
BstC8I	GCNNGC	6 cut(s)	279, 468, 1132, 1697, 1917, 1936
BstDSI	CCRYGG	1 cut(s)	1527
BstENI	CCTNNNNNAGG	1 cut(s)	372
BstF5I	GGATG	5 cut(s)	818, 916, 1795, 1832, 1911
BstH2I	RGCGCY	2 cut(s)	290, 1922
BstHHI	GCGC	2 cut(s)	289, 1921
BstKTI	GATC	7 cut(s)	316, 832, 1075, 1266, 1308, 1455, 1470
BstMAI	GTCTC	3 cut(s)	144, 249, 254
BstMBI	GATC	7 cut(s)	313, 829, 1072, 1263, 1305, 1452, 1467
BstMCI	CGRYCG	1 cut(s)	1308
BstMWI	GCNNNNNNNGC	4 cut(s)	293, 434, 476, 1127
BstNI	CCWGG	3 cut(s)	369, 384, 512
BstNSI	RCATGY	3 cut(s)	352, 437, 1097
BstPAI	GACNNNNGTC	1 cut(s)	494
BstSCI	CCNGG	6 cut(s)	306, 367, 382, 510, 1684, 1761
BstSFI	CTRYAG	2 cut(s)	492, 1230
BstSLI	GKGCMC	1 cut(s)	1495
BstV1I	GCAGC	3 cut(s)	283, 286, 658
BstV2I	GAAGAC	3 cut(s)	855, 921, 1577
BstX2I	RGATCY	2 cut(s)	313, 1072
BstYI	RGATCY	2 cut(s)	313, 1072
Bsu15I	ATCGAT	1 cut(s)	1650
Bsu36I	CCTNAGG	1 cut(s)	1409
BsuRI	GGCC	2 cut(s)	1228, 1640
BsuTUI	ATCGAT	1 cut(s)	1650
BtgI	CCRYGG	1 cut(s)	1527
BtsCI	GGATG	5 cut(s)	818, 916, 1795, 1832, 1911
BtsIMutI	CAGTG	4 cut(s)	392, 1431, 1612, 1905
Cac8I	GCNNGC	6 cut(s)	279, 468, 1132, 1697, 1917, 1936
CfoI	GCGC	2 cut(s)	289, 1921
Cfr10I	RCCGGY	1 cut(s)	1934
Cfr13I	GGNCC	2 cut(s)	93, 556
ClaI	ATCGAT	1 cut(s)	1650
Csp6I	GTAC	5 cut(s)	870, 1097, 1235, 1474, 1807
CviQI	GTAC	5 cut(s)	870, 1097, 1235, 1474, 1807
DinI	GGCGCC	1 cut(s)	288
DpnI	GATC	7 cut(s)	315, 831, 1074, 1265, 1307, 1454, 1469
DpnII	GATC	7 cut(s)	313, 829, 1072, 1263, 1305, 1452, 1467
DraI	TTTAAA	1 cut(s)	1029
Eam1104I	CTCTTC	7 cut(s)	252, 382, 467, 780, 997, 1128, 1497
EarI	CTCTTC	7 cut(s)	252, 382, 467, 780, 997, 1128, 1497
Eco130I	CCWWGG	3 cut(s)	675, 1068, 1298
Eco147I	AGGCCT	2 cut(s)	1228, 1640
Eco47I	GGWCC	2 cut(s)	93, 556
Eco57I	CTGAAG	3 cut(s)	753, 904, 981
Eco81I	CCTNAGG	1 cut(s)	1409
EcoNI	CCTNNNNNAGG	1 cut(s)	372
EcoO109I	RGGNCCY	1 cut(s)	556
EcoRI	GAATTC	1 cut(s)	940
EcoRII	CCWGG	3 cut(s)	367, 382, 510
EcoT14I	CCWWGG	3 cut(s)	675, 1068, 1298
EgeI	GGCGCC	1 cut(s)	288
EheI	GGCGCC	1 cut(s)	288
ErhI	CCWWGG	3 cut(s)	675, 1068, 1298
FalI	AAGNNNNNCTT	2 cut(s)	572, 604
FaqI	GGGAC	1 cut(s)	289
FbaI	TGATCA	2 cut(s)	829, 1263
Fnu4HI	GCNGC	5 cut(s)	275, 297, 672, 879, 1887
FokI	GGATG	5 cut(s)	825, 923, 1802, 1819, 1918
Fsp4HI	GCNGC	5 cut(s)	275, 297, 672, 879, 1887
FspBI	CTAG	7 cut(s)	251, 530, 593, 945, 1299, 1542, 1703
GlaI	GCGC	2 cut(s)	288, 1920
GluI	GCNGC	5 cut(s)	275, 297, 672, 879, 1887
HaeII	RGCGCY	2 cut(s)	290, 1922
HaeIII	GGCC	2 cut(s)	1228, 1640
HapII	CCGG	4 cut(s)	308, 1686, 1762, 1935
HhaI	GCGC	2 cut(s)	289, 1921
Hin1I	GRCGYC	1 cut(s)	287
Hin6I	GCGC	2 cut(s)	287, 1919
HinP1I	GCGC	2 cut(s)	287, 1919
HincII	GTYRAC	3 cut(s)	102, 682, 793
HindII	GTYRAC	3 cut(s)	102, 682, 793
HindIII	AAGCTT	3 cut(s)	963, 1446, 1693
HinfI	GANTC	8 cut(s)	31, 656, 800, 851, 932, 1079, 1258, 1511
HpaII	CCGG	4 cut(s)	308, 1686, 1762, 1935
HphI	GGTGA	4 cut(s)	143, 269, 1364, 1887
Hpy166II	GTNNAC	5 cut(s)	102, 209, 682, 793, 1099
Hpy188III	TCNNGA	5 cut(s)	251, 929, 1076, 1339, 1555
Hpy8I	GTNNAC	5 cut(s)	102, 209, 682, 793, 1099
Hpy99I	CGWCG	1 cut(s)	1172
HpyAV	CCTTC	9 cut(s)	128, 170, 300, 364, 368, 738, 860, 1434, 1539
HpyCH4III	ACNGT	9 cut(s)	45, 172, 257, 493, 1234, 1270, 1528, 1607, 1847
HpyCH4IV	ACGT	2 cut(s)	690, 701
HpyF10VI	GCNNNNNNNGC	4 cut(s)	293, 434, 476, 1127
HpySE526I	ACGT	2 cut(s)	690, 701
Hsp92I	GRCGYC	1 cut(s)	287
HspAI	GCGC	2 cut(s)	287, 1919
KasI	GGCGCC	1 cut(s)	286
KpnI	GGTACC	1 cut(s)	873
KroI	GCCGGC	1 cut(s)	1934
KroNI	GCCGGC	1 cut(s)	1936
Ksp22I	TGATCA	2 cut(s)	829, 1263
Kzo9I	GATC	7 cut(s)	313, 829, 1072, 1263, 1305, 1452, 1467
LguI	GCTCTTC	2 cut(s)	382, 1128
LmnI	GCTCC	2 cut(s)	75, 1883
Lsp1109I	GCAGC	3 cut(s)	283, 286, 658
LweI	GCATC	6 cut(s)	313, 488, 849, 1742, 1780, 1804
MaeI	CTAG	7 cut(s)	251, 530, 593, 945, 1299, 1542, 1703
MaeII	ACGT	2 cut(s)	690, 701
MaeIII	GTNAC	4 cut(s)	535, 947, 1352, 1643
MalI	GATC	7 cut(s)	315, 831, 1074, 1265, 1307, 1454, 1469
MbiI	CCGCTC	2 cut(s)	1499, 1886
MboI	GATC	7 cut(s)	313, 829, 1072, 1263, 1305, 1452, 1467
MflI	RGATCY	2 cut(s)	313, 1072
MhlI	GDGCHC	2 cut(s)	394, 1495
Mly113I	GGCGCC	1 cut(s)	287
MlyI	GAGTC	2 cut(s)	794, 845
MroNI	GCCGGC	1 cut(s)	1934
MroXI	GAANNNNTTC	1 cut(s)	1114
MspI	CCGG	4 cut(s)	308, 1686, 1762, 1935
MspR9I	CCNGG	6 cut(s)	308, 369, 384, 512, 1686, 1763
Mva1269I	GAATGC	2 cut(s)	924, 1015
MvaI	CCWGG	3 cut(s)	369, 384, 512
MwoI	GCNNNNNNNGC	4 cut(s)	293, 434, 476, 1127
NaeI	GCCGGC	1 cut(s)	1936
NarI	GGCGCC	1 cut(s)	287
NciI	CCSGG	3 cut(s)	308, 1686, 1763
NdeII	GATC	7 cut(s)	313, 829, 1072, 1263, 1305, 1452, 1467
NgoMIV	GCCGGC	1 cut(s)	1934
NlaIV	GGNNCC	5 cut(s)	24, 288, 871, 1272, 1422
NmeAIII	GCCGAG	1 cut(s)	352
NmuCI	GTSAC	4 cut(s)	535, 947, 1352, 1643
NspI	RCATGY	3 cut(s)	352, 437, 1097
PceI	AGGCCT	2 cut(s)	1228, 1640
PciI	ACATGT	1 cut(s)	1093
PciSI	GCTCTTC	2 cut(s)	382, 1128
PctI	GAATGC	2 cut(s)	924, 1015
PdiI	GCCGGC	1 cut(s)	1936
PdmI	GAANNNNTTC	1 cut(s)	1114
PfeI	GAWTC	6 cut(s)	31, 656, 932, 1079, 1258, 1511
PfoI	TCCNGGA	1 cut(s)	1684
PkrI	GCNGC	5 cut(s)	276, 298, 673, 880, 1888
Ple19I	CGATCG	1 cut(s)	1308
PleI	GAGTC	2 cut(s)	794, 845
PluTI	GGCGCC	1 cut(s)	290
PpsI	GAGTC	2 cut(s)	794, 845
PpuMI	RGGWCCY	1 cut(s)	556
PscI	ACATGT	1 cut(s)	1093
PshAI	GACNNNNGTC	1 cut(s)	494
Psp5II	RGGWCCY	1 cut(s)	556
Psp6I	CCWGG	3 cut(s)	367, 382, 510
PspGI	CCWGG	3 cut(s)	367, 382, 510
PspN4I	GGNNCC	5 cut(s)	24, 288, 871, 1272, 1422
PspPI	GGNCC	2 cut(s)	93, 556
PspPPI	RGGWCCY	1 cut(s)	556
PsuI	RGATCY	2 cut(s)	313, 1072
PvuI	CGATCG	1 cut(s)	1308
RsaI	GTAC	5 cut(s)	871, 1098, 1236, 1475, 1808
RsaNI	GTAC	5 cut(s)	870, 1097, 1235, 1474, 1807
SapI	GCTCTTC	2 cut(s)	382, 1128
SatI	GCNGC	5 cut(s)	275, 297, 672, 879, 1887
Sau3AI	GATC	7 cut(s)	313, 829, 1072, 1263, 1305, 1452, 1467
Sau96I	GGNCC	2 cut(s)	93, 556
ScaI	AGTACT	1 cut(s)	1475
SchI	GAGTC	2 cut(s)	794, 845
ScrFI	CCNGG	6 cut(s)	308, 369, 384, 512, 1686, 1763
SduI	GDGCHC	2 cut(s)	394, 1495
SfaNI	GCATC	6 cut(s)	313, 488, 849, 1742, 1780, 1804
SfcI	CTRYAG	2 cut(s)	492, 1230
SfoI	GGCGCC	1 cut(s)	288
SinI	GGWCC	2 cut(s)	93, 556
SseBI	AGGCCT	2 cut(s)	1228, 1640
SsiI	CCGC	3 cut(s)	878, 1499, 1886
SspDI	GGCGCC	1 cut(s)	286
SspMI	CTAG	7 cut(s)	251, 530, 593, 945, 1299, 1542, 1703
StuI	AGGCCT	2 cut(s)	1228, 1640
StyD4I	CCNGG	6 cut(s)	306, 367, 382, 510, 1684, 1761
StyI	CCWWGG	3 cut(s)	675, 1068, 1298
TaaI	ACNGT	9 cut(s)	45, 172, 257, 493, 1234, 1270, 1528, 1607, 1847
TaiI	ACGT	2 cut(s)	693, 704
TaqI	TCGA	4 cut(s)	1077, 1451, 1650, 1879
TatI	WGTACW	4 cut(s)	1096, 1234, 1473, 1806
TauI	GCSGC	2 cut(s)	881, 1889
TfiI	GAWTC	6 cut(s)	31, 656, 932, 1079, 1258, 1511
TscAI	CASTG	4 cut(s)	399, 1438, 1612, 1905
TseFI	GTSAC	4 cut(s)	535, 947, 1352, 1643
TseI	GCWGC	3 cut(s)	274, 296, 671
Tsp45I	GTSAC	4 cut(s)	535, 947, 1352, 1643
TspDTI	ATGAA	8 cut(s)	737, 798, 895, 927, 953, 1104, 1208, 1668
TspGWI	ACGGA	2 cut(s)	1185, 1337
TspRI	CASTG	4 cut(s)	399, 1438, 1612, 1905
VpaK11BI	GGWCC	2 cut(s)	93, 556
XagI	CCTNNNNNAGG	1 cut(s)	372
XapI	RAATTY	5 cut(s)	743, 940, 1342, 1396, 1550
XbaI	TCTAGA	1 cut(s)	250
XceI	RCATGY	3 cut(s)	352, 437, 1097
XmaJI	CCTAGG	1 cut(s)	1298
XmnI	GAANNNNTTC	1 cut(s)	1114
XspI	CTAG	7 cut(s)	251, 530, 593, 945, 1299, 1542, 1703
ZrmI	AGTACT	1 cut(s)	1475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.