Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0012648

Physical Location & Seq

Genomic Coordinates Forward (+)

46897710 .. 46901887

Gene Structure 4178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG255400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGGCTAATGGGACTCAAATCCATGAGAGGGTGCCTGAGAATCTAAGGAAACAGTTTGCTGTTGCTGTCAGGAGTATTAAGTGGAGCTATGCAATTTTCTGGTCATTGTCAACAACACAACAAGGGGTGGTGGAATGGGGTGAAGGGTACTACAATGGAGACATCAAAACTAGGAAGACGGTCGAAGGAATAGAACCTAAAGCTGATAAAATAGGTTTGCAGAGGAATGAGCAACTTAGAGAGTTGTATAAGGCTCTCTTAGAAGGCGAGTCAACGGACCAACAAGCAAAAGCGCCTTCTGCTGCATTGTCTCCAGAGGATCTCACAGATGCGGAGTGGTATTACTTGCTTTGCATGTCATTTGTGTTCAATATTGGCGAAGGTTTGCCCGGAAGAGCATTAGCAAATGGGAAAAGCATTTGGTTATGCAATGCTCAATATGCGGATAGCAAAGTATTTTCTCGTTCTTTGTTAGCAAAGAGTGCGTCTATTCAGACTGTGGTCTGCTTTCCCTATCTTGGAGGTGTTGTTGAGCTAGGTGTGACGGAGCTGGTAGCAGAGGACCCTAGTCTCCTTCAACACATCAAGGCTTCCTTACTAGATTTCTCAAAGCCAGATTGCTCCGAGAAAGCTTCCTCTGCACCTCACAAAGCAGATGAAGACTCGGACCAAATACTTGCCAACATTGTAGGCCATGAAATAGTTGATACATTGGGTTTGGAGAACCTATATTCCCCTTCACAAGAACTCAAATTTGATCAGAGTGGAATTAATGGATTACACGGACATGATGAAGAGTTCAGCATGGGCTCTGCTGATGAATGTTCCAGGGGATGTGAGCACAATCATCAGACAGAAGACTCCTTTATGCTTGAAGCTGTCAATGGTGGGGCTTCTCAAGTTCAGAGTTGGCATTTCATGGATGATGATTTCAGCAATGGATTTCAAGATTCCATGAATTCTAGTGACTGTATATCTGAAGCTTTTGTTAATCAAGGAAAGGCTCATTCTTCTACTAGACCTGAGAATAAGAATCATAGTCATTTAAAAGAACTTCAGAACTTCAATGACACAAAATTCAGCTCCTTGGATCTTGGACCAGCTGATGATCATTTACACTACAAAAGAACTCTTTCTGCTATTCTGGGGAACTCAATGCGGATAATTGAAAACCCATATTTTTGCAGTGGAGGTGGAAAATCTAGTTTTGTGCAATGGAAGAAGGGAGTTGTTTATAAATGTAGCCCAAAAGCTCAGCAGAAACTGTTAAAGAATATTTTGTTTACAGTTCCATTGATGATGAGTGGCGGCTCTCCTAGTCCCCAAAAAGAAACTACTACAAACTCCAAATCAGAAAGTGATGATATGCACGAGAAAATGAGAGAGAATGAAAAGTTGTTGGTCCTGAGGTCAATGGTTCCTTCTATGACTGAGATTGACAGGGCATCAATCCTCGATGACACAATTAAGTATTTGAAAGAGCTTGAGGCAAGAGCAGAAGAGATAGAATCTTGCATGGACACTGTGGAAGCAATAGCTAGAAGGAAATTCCTAGAAAGGGCAGAGAAGGCATCAGATAACTATGACAAAACAAAGACTGGCAATGCTAAAAAGCCTTGGATAAACAAGCGGAAGGCCTGTGACATTGATGAAAGTGACCCAGAACTTAATAGGCTTGTCTCCAAAGAAAGCTTACCACTAGATGTGAAAGTCAGTGTAAAAGAGCAGGAGGTTCTGATTGAGATGAGATGCCCTTATAGGGAATACATCTTGCTTGATATAATGGATGCTGTTAACAGTCTGTACTTAGATGCCCACTCAGTGCAATCATCCACCCTCAATGATATTCTCACATTGAGCCTTAAATCAAAGGTTAGTAGTCCCAAGTCTTCTGGCCGATCTTTCAGAGGTTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

638

Amino Acids

71.22

Weight (kDa)

5.34

Isoelectric Point (pI)

50.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	15 - 197	5.8e-52	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH-TF_ACT-like_plant	PF22754	568 - 625	2.1e-15	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012648)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g14230 FvH4_7g14230 FvH4_7g14230
malus_domestica	MD01G1060200.v1.1 MD07G1137500.v1.1
prunus_persica	Prupe.2G170100_v2.0.a1 Prupe.2G170100_v2.0.a1
pyrus_communis	pycom01g09030 pycom07g13540
rosa_chinensis	RchiOBHm_Chr1g0355211
rosa_laevigata	RLG00000028171
rosa_multiflora	Rmu_sc0003115.1_g000041
rosa_roxburghii	Rroxscaffold_4G00300600
rosa_rugosa	Rorug01G0245600
rosa_samantha	Rh1AG258000 Rh1BG227600 Rh1CG241700 Rh1DG255400
rosa_wichuraiana	Rw1G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1236
AccB1I	GGYRCC	1 cut(s)	31
AciI	CCGC	5 cut(s)	332, 443, 1159, 1308, 1630
AclWI	GGATC	2 cut(s)	327, 1098
AcoI	YGGCCR	1 cut(s)	1894
AcsI	RAATTY	4 cut(s)	752, 958, 1076, 1547
AcuI	CTGAAG	2 cut(s)	999, 1040
AdeI	CACNNNGTG	1 cut(s)	1822
AfaI	GTAC	2 cut(s)	149, 1805
AfiI	CCNNNNNNNGG	4 cut(s)	28, 518, 1558, 1759
AgsI	TTSAA	7 cut(s)	370, 578, 875, 947, 1066, 1169, 1477
AjnI	CCWGG	1 cut(s)	827
AloI	GAACNNNNNNTCC	2 cut(s)	716, 748
Alw21I	GWGCWC	1 cut(s)	843
Alw26I	GTCTC	4 cut(s)	153, 315, 575, 1684
AlwI	GGATC	2 cut(s)	327, 1098
AlwNI	CAGNNNCTG	1 cut(s)	1264
AoxI	GGCC	3 cut(s)	691, 1635, 1894
ApeKI	GCWGC	1 cut(s)	302
ApoI	RAATTY	4 cut(s)	752, 958, 1076, 1547
ArsI	GACNNNNNNTTYG	2 cut(s)	470, 502
AseI	ATTAAT	1 cut(s)	771
Asp700I	GAANNNNTTC	1 cut(s)	1132
AspLEI	GCGC	1 cut(s)	295
AspS9I	GGNCC	5 cut(s)	277, 562, 667, 1097, 1402
AsuC2I	CCSGG	1 cut(s)	390
AsuHPI	GGTGA	1 cut(s)	152
AvaII	GGWCC	5 cut(s)	277, 562, 667, 1097, 1402
AxyI	CCTNAGG	1 cut(s)	1406
BanI	GGYRCC	1 cut(s)	31
BanII	GRGCYC	1 cut(s)	812
BauI	CACGAG	1 cut(s)	1370
BbsI	GAAGAC	4 cut(s)	182, 666, 864, 1881
Bbv12I	GWGCWC	1 cut(s)	843
BbvI	GCAGC	1 cut(s)	289
BciT130I	CCWGG	1 cut(s)	829
BclI	TGATCA	2 cut(s)	757, 1108
BcnI	CCSGG	1 cut(s)	390
BcoDI	GTCTC	4 cut(s)	153, 315, 575, 1684
BfoI	RGCGCY	1 cut(s)	296
BisI	GCNGC	2 cut(s)	303, 1309
BlpI	GCTNAGC	1 cut(s)	1254
BlsI	GCNGC	2 cut(s)	304, 1310
Bme1390I	CCNGG	2 cut(s)	390, 829
Bme18I	GGWCC	5 cut(s)	277, 562, 667, 1097, 1402
BmgT120I	GGNCC	5 cut(s)	277, 562, 667, 1097, 1402
BmiI	GGNNCC	3 cut(s)	33, 564, 1419
BmrFI	CCNGG	2 cut(s)	390, 829
BmsI	GCATC	6 cut(s)	319, 1454, 1580, 1739, 1777, 1801
BoxI	GACNNNNGTC	2 cut(s)	500, 567
BpiI	GAAGAC	4 cut(s)	182, 666, 864, 1881
BpmI	CTGGAG	1 cut(s)	297
Bpu1102I	GCTNAGC	1 cut(s)	1254
BpuEI	CTTGAG	2 cut(s)	882, 1505
BpuMI	CCSGG	1 cut(s)	390
BsaJI	CCNNGG	3 cut(s)	828, 1086, 1616
BsaXI	ACNNNNNCTCC	2 cut(s)	513, 543
Bsc4I	CCNNNNNNNGG	4 cut(s)	28, 518, 1558, 1759
Bse1I	ACTGG	1 cut(s)	1603
Bse21I	CCTNAGG	1 cut(s)	1406
Bse3DI	GCAATG	4 cut(s)	436, 943, 1220, 1609
BseBI	CCWGG	1 cut(s)	829
BseDI	CCNNGG	3 cut(s)	828, 1086, 1616
BseGI	GGATG	4 cut(s)	839, 928, 1792, 1829
BseLI	CCNNNNNNNGG	4 cut(s)	28, 518, 1558, 1759
BseMI	GCAATG	4 cut(s)	436, 943, 1220, 1609
BseMII	CTCAG	6 cut(s)	27, 1014, 1268, 1397, 1422, 1833
BseNI	ACTGG	1 cut(s)	1603
BseXI	GCAGC	1 cut(s)	289
BsgI	GTGCAG	1 cut(s)	624
Bsh1285I	CGRYCG	1 cut(s)	183
BshFI	GGCC	3 cut(s)	693, 1637, 1896
BshNI	GGYRCC	1 cut(s)	31
BsiEI	CGRYCG	1 cut(s)	183
BsiHKAI	GWGCWC	1 cut(s)	843
BsiSI	CCGG	1 cut(s)	390
BslFI	GGGAC	3 cut(s)	25, 1305, 1866
BslI	CCNNNNNNNGG	4 cut(s)	28, 518, 1558, 1759
BsmAI	GTCTC	4 cut(s)	153, 315, 575, 1684
BsmFI	GGGAC	3 cut(s)	25, 1305, 1866
BsnI	GGCC	3 cut(s)	693, 1637, 1896
Bsp1286I	GDGCHC	2 cut(s)	812, 843
Bsp143I	GATC	5 cut(s)	319, 757, 1090, 1108, 1898
Bsp1720I	GCTNAGC	1 cut(s)	1254
BspACI	CCGC	5 cut(s)	332, 443, 1159, 1308, 1630
BspANI	GGCC	3 cut(s)	693, 1637, 1896
BspCNI	CTCAG	6 cut(s)	28, 1015, 1267, 1398, 1423, 1832
BspLI	GGNNCC	3 cut(s)	33, 564, 1419
BspPI	GGATC	2 cut(s)	327, 1098
BspQI	GCTCTTC	1 cut(s)	388
BspT107I	GGYRCC	1 cut(s)	31
BsrDI	GCAATG	4 cut(s)	436, 943, 1220, 1609
BsrI	ACTGG	1 cut(s)	1603
BssECI	CCNNGG	3 cut(s)	828, 1086, 1616
BssMI	GATC	5 cut(s)	319, 757, 1090, 1108, 1898
BssSI	CACGAG	1 cut(s)	1370
BssT1I	CCWWGG	2 cut(s)	1086, 1616
Bst2BI	CACGAG	1 cut(s)	1370
Bst2UI	CCWGG	1 cut(s)	829
Bst4CI	ACNGT	8 cut(s)	54, 181, 499, 971, 1266, 1288, 1525, 1799
Bst6I	CTCTTC	3 cut(s)	388, 789, 1494
BstAPI	GCANNNNNTGC	1 cut(s)	482
BstF5I	GGATG	4 cut(s)	839, 928, 1792, 1829
BstH2I	RGCGCY	1 cut(s)	296
BstHHI	GCGC	1 cut(s)	295
BstKTI	GATC	5 cut(s)	322, 760, 1093, 1111, 1901
BstMAI	GTCTC	4 cut(s)	153, 315, 575, 1684
BstMBI	GATC	5 cut(s)	319, 757, 1090, 1108, 1898
BstMCI	CGRYCG	1 cut(s)	183
BstMWI	GCNNNNNNNGC	5 cut(s)	299, 440, 482, 638, 1568
BstNI	CCWGG	1 cut(s)	829
BstNSI	RCATGY	1 cut(s)	358
BstPAI	GACNNNNGTC	2 cut(s)	500, 567
BstSCI	CCNGG	2 cut(s)	388, 827
BstV1I	GCAGC	1 cut(s)	289
BstV2I	GAAGAC	4 cut(s)	182, 666, 864, 1881
BstX2I	RGATCY	2 cut(s)	319, 1090
BstYI	RGATCY	2 cut(s)	319, 1090
Bsu36I	CCTNAGG	1 cut(s)	1406
BsuRI	GGCC	3 cut(s)	693, 1637, 1896
BtsCI	GGATG	4 cut(s)	839, 928, 1792, 1829
BtsI	GCAGTG	1 cut(s)	1192
BtsIMutI	CAGTG	4 cut(s)	1192, 1521, 1720, 1827
CaiI	CAGNNNCTG	1 cut(s)	1264
CfoI	GCGC	1 cut(s)	295
Cfr13I	GGNCC	5 cut(s)	277, 562, 667, 1097, 1402
CseI	GACGC	1 cut(s)	474
Csp6I	GTAC	2 cut(s)	148, 1804
CviAII	CATG	8 cut(s)	23, 355, 695, 788, 805, 919, 955, 1516
CviQI	GTAC	2 cut(s)	148, 1804
DpnI	GATC	5 cut(s)	321, 759, 1092, 1110, 1900
DpnII	GATC	5 cut(s)	319, 757, 1090, 1108, 1898
DraI	TTTAAA	1 cut(s)	1047
DraIII	CACNNNGTG	1 cut(s)	1822
EaeI	YGGCCR	1 cut(s)	1894
Eam1104I	CTCTTC	3 cut(s)	388, 789, 1494
EarI	CTCTTC	3 cut(s)	388, 789, 1494
Eco130I	CCWWGG	2 cut(s)	1086, 1616
Eco147I	AGGCCT	1 cut(s)	1637
Eco24I	GRGCYC	1 cut(s)	812
Eco47I	GGWCC	5 cut(s)	277, 562, 667, 1097, 1402
Eco57I	CTGAAG	2 cut(s)	999, 1040
Eco81I	CCTNAGG	1 cut(s)	1406
EcoO109I	RGGNCCY	1 cut(s)	562
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	1 cut(s)	827
EcoT14I	CCWWGG	2 cut(s)	1086, 1616
EcoT38I	GRGCYC	1 cut(s)	812
ErhI	CCWWGG	2 cut(s)	1086, 1616
FaeI	CATG	8 cut(s)	26, 358, 698, 791, 808, 922, 958, 1519
FalI	AAGNNNNNCTT	4 cut(s)	242, 274, 578, 610
FaqI	GGGAC	3 cut(s)	25, 1305, 1866
FatI	CATG	8 cut(s)	22, 354, 694, 787, 804, 918, 954, 1515
FbaI	TGATCA	2 cut(s)	757, 1108
Fnu4HI	GCNGC	2 cut(s)	303, 1309
FokI	GGATG	4 cut(s)	846, 935, 1799, 1816
FriOI	GRGCYC	1 cut(s)	812
Fsp4HI	GCNGC	2 cut(s)	303, 1309
GlaI	GCGC	1 cut(s)	294
GluI	GCNGC	2 cut(s)	303, 1309
GsuI	CTGGAG	1 cut(s)	297
HaeII	RGCGCY	1 cut(s)	296
HaeIII	GGCC	3 cut(s)	693, 1637, 1896
HapII	CCGG	1 cut(s)	390
HgaI	GACGC	1 cut(s)	474
HhaI	GCGC	1 cut(s)	295
Hin1II	CATG	8 cut(s)	26, 358, 698, 791, 808, 922, 958, 1519
Hin6I	GCGC	1 cut(s)	293
HinP1I	GCGC	1 cut(s)	293
HincII	GTYRAC	3 cut(s)	111, 273, 1795
HindII	GTYRAC	3 cut(s)	111, 273, 1795
HindIII	AAGCTT	3 cut(s)	630, 981, 1690
HinfI	GANTC	8 cut(s)	13, 40, 269, 662, 860, 950, 1033, 1508
HpaI	GTTAAC	1 cut(s)	1795
HpaII	CCGG	1 cut(s)	390
HphI	GGTGA	1 cut(s)	152
Hpy166II	GTNNAC	4 cut(s)	111, 273, 1284, 1795
Hpy188III	TCNNGA	4 cut(s)	70, 314, 947, 1405
Hpy8I	GTNNAC	4 cut(s)	111, 273, 1284, 1795
HpyCH4III	ACNGT	8 cut(s)	54, 181, 499, 971, 1266, 1288, 1525, 1799
HpyF10VI	GCNNNNNNNGC	5 cut(s)	299, 440, 482, 638, 1568
Hsp92II	CATG	8 cut(s)	26, 358, 698, 791, 808, 922, 958, 1519
HspAI	GCGC	1 cut(s)	293
Ksp22I	TGATCA	2 cut(s)	757, 1108
KspAI	GTTAAC	1 cut(s)	1795
Kzo9I	GATC	5 cut(s)	319, 757, 1090, 1108, 1898
LguI	GCTCTTC	1 cut(s)	388
LmnI	GCTCC	4 cut(s)	84, 547, 626, 1088
Lsp1109I	GCAGC	1 cut(s)	289
LweI	GCATC	6 cut(s)	319, 1454, 1580, 1739, 1777, 1801
MaeIII	GTNAC	5 cut(s)	541, 965, 1640, 1655, 1910
MalI	GATC	5 cut(s)	321, 759, 1092, 1110, 1900
MboI	GATC	5 cut(s)	319, 757, 1090, 1108, 1898
MboII	GAAGA	9 cut(s)	187, 405, 671, 806, 869, 1002, 1231, 1511, 1881
MflI	RGATCY	2 cut(s)	319, 1090
MhlI	GDGCHC	2 cut(s)	812, 843
MluCI	AATT	8 cut(s)	93, 752, 768, 958, 1076, 1164, 1464, 1547
MlyI	GAGTC	4 cut(s)	7, 278, 656, 854
MroXI	GAANNNNTTC	1 cut(s)	1132
MseI	TTAA	9 cut(s)	78, 771, 990, 1046, 1268, 1467, 1668, 1794, 1863
MslI	CAYNNNNRTG	1 cut(s)	786
MspA1I	CMGCKG	1 cut(s)	1103
MspI	CCGG	1 cut(s)	390
MspR9I	CCNGG	2 cut(s)	390, 829
MvaI	CCWGG	1 cut(s)	829
MwoI	GCNNNNNNNGC	5 cut(s)	299, 440, 482, 638, 1568
NciI	CCSGG	1 cut(s)	390
NdeII	GATC	5 cut(s)	319, 757, 1090, 1108, 1898
NlaIII	CATG	8 cut(s)	26, 358, 698, 791, 808, 922, 958, 1519
NlaIV	GGNNCC	3 cut(s)	33, 564, 1419
NmuCI	GTSAC	4 cut(s)	541, 965, 1640, 1655
NspI	RCATGY	1 cut(s)	358
PceI	AGGCCT	1 cut(s)	1637
PciSI	GCTCTTC	1 cut(s)	388
PdmI	GAANNNNTTC	1 cut(s)	1132
PfeI	GAWTC	4 cut(s)	40, 950, 1033, 1508
PkrI	GCNGC	2 cut(s)	304, 1310
PleI	GAGTC	4 cut(s)	7, 277, 656, 854
PpsI	GAGTC	4 cut(s)	7, 277, 656, 854
PpuMI	RGGWCCY	1 cut(s)	562
PshAI	GACNNNNGTC	2 cut(s)	500, 567
PshBI	ATTAAT	1 cut(s)	771
PsiI	TTATAA	1 cut(s)	1236
Psp5II	RGGWCCY	1 cut(s)	562
Psp6I	CCWGG	1 cut(s)	827
PspGI	CCWGG	1 cut(s)	827
PspN4I	GGNNCC	3 cut(s)	33, 564, 1419
PspPI	GGNCC	5 cut(s)	277, 562, 667, 1097, 1402
PspPPI	RGGWCCY	1 cut(s)	562
PstNI	CAGNNNCTG	1 cut(s)	1264
PsuI	RGATCY	2 cut(s)	319, 1090
PvuII	CAGCTG	1 cut(s)	1103
RsaI	GTAC	2 cut(s)	149, 1805
RsaNI	GTAC	2 cut(s)	148, 1804
RseI	CAYNNNNRTG	1 cut(s)	786
SapI	GCTCTTC	1 cut(s)	388
SaqAI	TTAA	9 cut(s)	78, 771, 990, 1046, 1268, 1467, 1668, 1794, 1863
SatI	GCNGC	2 cut(s)	303, 1309
Sau3AI	GATC	5 cut(s)	319, 757, 1090, 1108, 1898
Sau96I	GGNCC	5 cut(s)	277, 562, 667, 1097, 1402
SchI	GAGTC	4 cut(s)	7, 278, 656, 854
ScrFI	CCNGG	2 cut(s)	390, 829
SduI	GDGCHC	2 cut(s)	812, 843
SfaNI	GCATC	6 cut(s)	319, 1454, 1580, 1739, 1777, 1801
SinI	GGWCC	5 cut(s)	277, 562, 667, 1097, 1402
SmiMI	CAYNNNNRTG	1 cut(s)	786
SmlI	CTYRAG	2 cut(s)	897, 1484
SmoI	CTYRAG	2 cut(s)	897, 1484
Sse9I	AATT	8 cut(s)	93, 752, 768, 958, 1076, 1164, 1464, 1547
SseBI	AGGCCT	1 cut(s)	1637
SsiI	CCGC	5 cut(s)	332, 443, 1159, 1308, 1630
SspI	AATATT	2 cut(s)	373, 1276
StuI	AGGCCT	1 cut(s)	1637
StyD4I	CCNGG	2 cut(s)	388, 827
StyI	CCWWGG	2 cut(s)	1086, 1616
TaaI	ACNGT	8 cut(s)	54, 181, 499, 971, 1266, 1288, 1525, 1799
TaqI	TCGA	2 cut(s)	183, 1455
TasI	AATT	8 cut(s)	93, 752, 768, 958, 1076, 1164, 1464, 1547
TatI	WGTACW	1 cut(s)	1803
TauI	GCSGC	1 cut(s)	1311
TfiI	GAWTC	4 cut(s)	40, 950, 1033, 1508
Tru1I	TTAA	9 cut(s)	78, 771, 990, 1046, 1268, 1467, 1668, 1794, 1863
Tru9I	TTAA	9 cut(s)	78, 771, 990, 1046, 1268, 1467, 1668, 1794, 1863
TscAI	CASTG	4 cut(s)	1192, 1528, 1720, 1827
TseFI	GTSAC	4 cut(s)	541, 965, 1640, 1655
TseI	GCWGC	1 cut(s)	302
Tsp45I	GTSAC	4 cut(s)	541, 965, 1640, 1655
TspDTI	ATGAA	8 cut(s)	672, 711, 807, 834, 907, 971, 1404, 1665
TspGWI	ACGGA	3 cut(s)	290, 560, 798
TspRI	CASTG	4 cut(s)	1192, 1528, 1720, 1827
VpaK11BI	GGWCC	5 cut(s)	277, 562, 667, 1097, 1402
VspI	ATTAAT	1 cut(s)	771
XapI	RAATTY	4 cut(s)	752, 958, 1076, 1547
XceI	RCATGY	1 cut(s)	358
XmnI	GAANNNNTTC	1 cut(s)	1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.