Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g14230 FvH4_7g14230 FvH4_7g14230 |
| malus_domestica | MD01G1060200.v1.1 MD07G1137500.v1.1 |
| prunus_persica | Prupe.2G170100_v2.0.a1 Prupe.2G170100_v2.0.a1 |
| pyrus_communis | pycom01g09030 pycom07g13540 |
| rosa_chinensis | RchiOBHm_Chr1g0355211 |
| rosa_laevigata | RLG00000028171 |
| rosa_multiflora | Rmu_sc0003115.1_g000041 |
| rosa_roxburghii | Rroxscaffold_4G00300600 |
| rosa_rugosa | Rorug01G0245600 |
| rosa_samantha | Rh1AG258000 Rh1BG227600 Rh1CG241700 Rh1DG255400 |
| rosa_wichuraiana | Rw1G022760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1236 |
| AccB1I | GGYRCC | 1 cut(s) | 31 |
| AciI | CCGC | 4 cut(s) | 332, 443, 1308, 1630 |
| AclWI | GGATC | 3 cut(s) | 327, 1098, 1888 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 4 cut(s) | 752, 958, 1076, 1547 |
| AcuI | CTGAAG | 2 cut(s) | 999, 1040 |
| AdeI | CACNNNGTG | 1 cut(s) | 1822 |
| AfaI | GTAC | 2 cut(s) | 149, 1805 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 28, 518, 1558, 1759 |
| AgsI | TTSAA | 7 cut(s) | 370, 578, 875, 947, 1066, 1169, 1477 |
| AjnI | CCWGG | 2 cut(s) | 388, 827 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 716, 748 |
| Alw21I | GWGCWC | 1 cut(s) | 843 |
| Alw26I | GTCTC | 4 cut(s) | 153, 315, 575, 1684 |
| AlwI | GGATC | 3 cut(s) | 327, 1098, 1888 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1264 |
| AoxI | GGCC | 3 cut(s) | 3, 691, 1635 |
| ApeKI | GCWGC | 1 cut(s) | 302 |
| ApoI | RAATTY | 4 cut(s) | 752, 958, 1076, 1547 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 470, 502 |
| AseI | ATTAAT | 1 cut(s) | 771 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1132 |
| AspS9I | GGNCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| AsuHPI | GGTGA | 1 cut(s) | 152 |
| AvaII | GGWCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| AxyI | CCTNAGG | 1 cut(s) | 1406 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanI | GGYRCC | 1 cut(s) | 31 |
| BanII | GRGCYC | 1 cut(s) | 812 |
| BbsI | GAAGAC | 3 cut(s) | 182, 666, 864 |
| Bbv12I | GWGCWC | 1 cut(s) | 843 |
| BbvI | GCAGC | 1 cut(s) | 289 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 343, 377 |
| BciT130I | CCWGG | 2 cut(s) | 390, 829 |
| BclI | TGATCA | 1 cut(s) | 1108 |
| BcoDI | GTCTC | 4 cut(s) | 153, 315, 575, 1684 |
| BisI | GCNGC | 2 cut(s) | 303, 1309 |
| BlpI | GCTNAGC | 1 cut(s) | 1254 |
| BlsI | GCNGC | 2 cut(s) | 304, 1310 |
| Bme1390I | CCNGG | 2 cut(s) | 390, 829 |
| Bme18I | GGWCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| BmgT120I | GGNCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| BmiI | GGNNCC | 2 cut(s) | 33, 1419 |
| BmrFI | CCNGG | 2 cut(s) | 390, 829 |
| BmsI | GCATC | 5 cut(s) | 319, 1454, 1580, 1739, 1777 |
| BoxI | GACNNNNGTC | 2 cut(s) | 500, 567 |
| BpiI | GAAGAC | 3 cut(s) | 182, 666, 864 |
| BpmI | CTGGAG | 1 cut(s) | 297 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1254 |
| BpuEI | CTTGAG | 2 cut(s) | 882, 1505 |
| BsaJI | CCNNGG | 3 cut(s) | 828, 1086, 1616 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 513, 543 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 28, 518, 1558, 1759 |
| Bse1I | ACTGG | 2 cut(s) | 1603, 1895 |
| Bse21I | CCTNAGG | 1 cut(s) | 1406 |
| Bse3DI | GCAATG | 4 cut(s) | 436, 943, 1220, 1609 |
| BseBI | CCWGG | 2 cut(s) | 390, 829 |
| BseDI | CCNNGG | 3 cut(s) | 828, 1086, 1616 |
| BseGI | GGATG | 5 cut(s) | 839, 928, 1792, 1829, 1908 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 28, 518, 1558, 1759 |
| BseMI | GCAATG | 4 cut(s) | 436, 943, 1220, 1609 |
| BseMII | CTCAG | 6 cut(s) | 27, 1014, 1268, 1397, 1422, 1833 |
| BseNI | ACTGG | 2 cut(s) | 1603, 1895 |
| BseXI | GCAGC | 1 cut(s) | 289 |
| BsgI | GTGCAG | 1 cut(s) | 624 |
| Bsh1285I | CGRYCG | 1 cut(s) | 183 |
| BshFI | GGCC | 3 cut(s) | 5, 693, 1637 |
| BshNI | GGYRCC | 1 cut(s) | 31 |
| BsiEI | CGRYCG | 1 cut(s) | 183 |
| BsiHKAI | GWGCWC | 1 cut(s) | 843 |
| BslFI | GGGAC | 2 cut(s) | 25, 1305 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 28, 518, 1558, 1759 |
| BsmAI | GTCTC | 4 cut(s) | 153, 315, 575, 1684 |
| BsmFI | GGGAC | 2 cut(s) | 25, 1305 |
| BsnI | GGCC | 3 cut(s) | 5, 693, 1637 |
| Bsp1286I | GDGCHC | 2 cut(s) | 812, 843 |
| Bsp143I | GATC | 5 cut(s) | 319, 1090, 1108, 1737, 1880 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1254 |
| BspACI | CCGC | 4 cut(s) | 332, 443, 1308, 1630 |
| BspANI | GGCC | 3 cut(s) | 5, 693, 1637 |
| BspCNI | CTCAG | 6 cut(s) | 28, 1015, 1267, 1398, 1423, 1832 |
| BspLI | GGNNCC | 2 cut(s) | 33, 1419 |
| BspPI | GGATC | 3 cut(s) | 327, 1098, 1888 |
| BspQI | GCTCTTC | 1 cut(s) | 388 |
| BspT107I | GGYRCC | 1 cut(s) | 31 |
| BsrDI | GCAATG | 4 cut(s) | 436, 943, 1220, 1609 |
| BsrI | ACTGG | 2 cut(s) | 1603, 1895 |
| BssECI | CCNNGG | 3 cut(s) | 828, 1086, 1616 |
| BssMI | GATC | 5 cut(s) | 319, 1090, 1108, 1737, 1880 |
| BssT1I | CCWWGG | 2 cut(s) | 1086, 1616 |
| Bst2UI | CCWGG | 2 cut(s) | 390, 829 |
| Bst4CI | ACNGT | 8 cut(s) | 54, 181, 499, 971, 1266, 1288, 1525, 1799 |
| Bst6I | CTCTTC | 3 cut(s) | 388, 789, 1494 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 482 |
| BstC8I | GCNNGC | 2 cut(s) | 682, 1694 |
| BstF5I | GGATG | 5 cut(s) | 839, 928, 1792, 1829, 1908 |
| BstKTI | GATC | 5 cut(s) | 322, 1093, 1111, 1740, 1883 |
| BstMAI | GTCTC | 4 cut(s) | 153, 315, 575, 1684 |
| BstMBI | GATC | 5 cut(s) | 319, 1090, 1108, 1737, 1880 |
| BstMCI | CGRYCG | 1 cut(s) | 183 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 440, 482, 638, 690, 1568 |
| BstNI | CCWGG | 2 cut(s) | 390, 829 |
| BstNSI | RCATGY | 1 cut(s) | 358 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 500, 567 |
| BstSCI | CCNGG | 2 cut(s) | 388, 827 |
| BstV1I | GCAGC | 1 cut(s) | 289 |
| BstV2I | GAAGAC | 3 cut(s) | 182, 666, 864 |
| BstX2I | RGATCY | 2 cut(s) | 319, 1090 |
| BstYI | RGATCY | 2 cut(s) | 319, 1090 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1406 |
| BsuRI | GGCC | 3 cut(s) | 5, 693, 1637 |
| BtsCI | GGATG | 5 cut(s) | 839, 928, 1792, 1829, 1908 |
| BtsI | GCAGTG | 1 cut(s) | 1192 |
| BtsIMutI | CAGTG | 5 cut(s) | 1192, 1521, 1720, 1827, 1902 |
| Cac8I | GCNNGC | 2 cut(s) | 682, 1694 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1264 |
| Cfr13I | GGNCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| CseI | GACGC | 2 cut(s) | 474, 1079 |
| Csp6I | GTAC | 2 cut(s) | 148, 1804 |
| CviAII | CATG | 9 cut(s) | 23, 355, 695, 788, 805, 919, 955, 1370, 1516 |
| CviQI | GTAC | 2 cut(s) | 148, 1804 |
| DpnI | GATC | 5 cut(s) | 321, 1092, 1110, 1739, 1882 |
| DpnII | GATC | 5 cut(s) | 319, 1090, 1108, 1737, 1880 |
| DraI | TTTAAA | 1 cut(s) | 1047 |
| DraIII | CACNNNGTG | 1 cut(s) | 1822 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 3 cut(s) | 388, 789, 1494 |
| EarI | CTCTTC | 3 cut(s) | 388, 789, 1494 |
| Eco130I | CCWWGG | 2 cut(s) | 1086, 1616 |
| Eco147I | AGGCCT | 1 cut(s) | 1637 |
| Eco24I | GRGCYC | 1 cut(s) | 812 |
| Eco47I | GGWCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| Eco57I | CTGAAG | 2 cut(s) | 999, 1040 |
| Eco81I | CCTNAGG | 1 cut(s) | 1406 |
| EcoRI | GAATTC | 1 cut(s) | 958 |
| EcoRII | CCWGG | 2 cut(s) | 388, 827 |
| EcoT14I | CCWWGG | 2 cut(s) | 1086, 1616 |
| EcoT22I | ATGCAT | 1 cut(s) | 1371 |
| EcoT38I | GRGCYC | 1 cut(s) | 812 |
| ErhI | CCWWGG | 2 cut(s) | 1086, 1616 |
| FaeI | CATG | 9 cut(s) | 26, 358, 698, 791, 808, 922, 958, 1373, 1519 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 242, 274, 578, 610 |
| FaqI | GGGAC | 2 cut(s) | 25, 1305 |
| FatI | CATG | 9 cut(s) | 22, 354, 694, 787, 804, 918, 954, 1369, 1515 |
| FbaI | TGATCA | 1 cut(s) | 1108 |
| Fnu4HI | GCNGC | 2 cut(s) | 303, 1309 |
| FokI | GGATG | 5 cut(s) | 846, 935, 1799, 1816, 1915 |
| FriOI | GRGCYC | 1 cut(s) | 812 |
| Fsp4HI | GCNGC | 2 cut(s) | 303, 1309 |
| GluI | GCNGC | 2 cut(s) | 303, 1309 |
| GsuI | CTGGAG | 1 cut(s) | 297 |
| HaeIII | GGCC | 3 cut(s) | 5, 693, 1637 |
| HgaI | GACGC | 2 cut(s) | 474, 1079 |
| Hin1II | CATG | 9 cut(s) | 26, 358, 698, 791, 808, 922, 958, 1373, 1519 |
| HincII | GTYRAC | 3 cut(s) | 111, 273, 1795 |
| HindII | GTYRAC | 3 cut(s) | 111, 273, 1795 |
| HindIII | AAGCTT | 3 cut(s) | 630, 981, 1690 |
| HinfI | GANTC | 8 cut(s) | 13, 40, 269, 662, 860, 950, 1033, 1508 |
| HpaI | GTTAAC | 1 cut(s) | 1795 |
| HphI | GGTGA | 1 cut(s) | 152 |
| Hpy166II | GTNNAC | 4 cut(s) | 111, 273, 1284, 1795 |
| Hpy188I | TCNGA | 9 cut(s) | 495, 625, 667, 852, 906, 979, 1059, 1576, 1737 |
| Hpy188III | TCNNGA | 5 cut(s) | 70, 314, 947, 1405, 1741 |
| Hpy8I | GTNNAC | 4 cut(s) | 111, 273, 1284, 1795 |
| HpyCH4III | ACNGT | 8 cut(s) | 54, 181, 499, 971, 1266, 1288, 1525, 1799 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 440, 482, 638, 690, 1568 |
| Hsp92II | CATG | 9 cut(s) | 26, 358, 698, 791, 808, 922, 958, 1373, 1519 |
| Ksp22I | TGATCA | 1 cut(s) | 1108 |
| KspAI | GTTAAC | 1 cut(s) | 1795 |
| Kzo9I | GATC | 5 cut(s) | 319, 1090, 1108, 1737, 1880 |
| LguI | GCTCTTC | 1 cut(s) | 388 |
| LmnI | GCTCC | 4 cut(s) | 84, 547, 626, 1088 |
| Lsp1109I | GCAGC | 1 cut(s) | 289 |
| LweI | GCATC | 5 cut(s) | 319, 1454, 1580, 1739, 1777 |
| MaeIII | GTNAC | 4 cut(s) | 541, 965, 1640, 1655 |
| MalI | GATC | 5 cut(s) | 321, 1092, 1110, 1739, 1882 |
| MboI | GATC | 5 cut(s) | 319, 1090, 1108, 1737, 1880 |
| MboII | GAAGA | 9 cut(s) | 187, 405, 671, 806, 869, 1002, 1231, 1285, 1511 |
| MfeI | CAATTG | 1 cut(s) | 1887 |
| MflI | RGATCY | 2 cut(s) | 319, 1090 |
| MhlI | GDGCHC | 2 cut(s) | 812, 843 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 4 cut(s) | 7, 278, 656, 854 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 1371 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1132 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 9 cut(s) | 78, 771, 990, 1046, 1268, 1467, 1668, 1794, 1863 |
| MslI | CAYNNNNRTG | 1 cut(s) | 786 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 1103 |
| MspR9I | CCNGG | 2 cut(s) | 390, 829 |
| MunI | CAATTG | 1 cut(s) | 1887 |
| MvaI | CCWGG | 2 cut(s) | 390, 829 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 440, 482, 638, 690, 1568 |
| NdeII | GATC | 5 cut(s) | 319, 1090, 1108, 1737, 1880 |
| NlaIII | CATG | 9 cut(s) | 26, 358, 698, 791, 808, 922, 958, 1373, 1519 |
| NlaIV | GGNNCC | 2 cut(s) | 33, 1419 |
| NmuCI | GTSAC | 4 cut(s) | 541, 965, 1640, 1655 |
| NsiI | ATGCAT | 1 cut(s) | 1371 |
| NspI | RCATGY | 1 cut(s) | 358 |
| PceI | AGGCCT | 1 cut(s) | 1637 |
| PciSI | GCTCTTC | 1 cut(s) | 388 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1132 |
| PfeI | GAWTC | 4 cut(s) | 40, 950, 1033, 1508 |
| PkrI | GCNGC | 2 cut(s) | 304, 1310 |
| PleI | GAGTC | 4 cut(s) | 7, 277, 656, 854 |
| PpsI | GAGTC | 4 cut(s) | 7, 277, 656, 854 |
| PshAI | GACNNNNGTC | 2 cut(s) | 500, 567 |
| PshBI | ATTAAT | 1 cut(s) | 771 |
| PsiI | TTATAA | 1 cut(s) | 1236 |
| Psp6I | CCWGG | 2 cut(s) | 388, 827 |
| PspGI | CCWGG | 2 cut(s) | 388, 827 |
| PspN4I | GGNNCC | 2 cut(s) | 33, 1419 |
| PspPI | GGNCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1264 |
| PsuI | RGATCY | 2 cut(s) | 319, 1090 |
| PvuII | CAGCTG | 1 cut(s) | 1103 |
| RsaI | GTAC | 2 cut(s) | 149, 1805 |
| RsaNI | GTAC | 2 cut(s) | 148, 1804 |
| RseI | CAYNNNNRTG | 1 cut(s) | 786 |
| SapI | GCTCTTC | 1 cut(s) | 388 |
| SaqAI | TTAA | 9 cut(s) | 78, 771, 990, 1046, 1268, 1467, 1668, 1794, 1863 |
| SatI | GCNGC | 2 cut(s) | 303, 1309 |
| Sau3AI | GATC | 5 cut(s) | 319, 1090, 1108, 1737, 1880 |
| Sau96I | GGNCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| SchI | GAGTC | 4 cut(s) | 7, 278, 656, 854 |
| ScrFI | CCNGG | 2 cut(s) | 390, 829 |
| SduI | GDGCHC | 2 cut(s) | 812, 843 |
| SfaNI | GCATC | 5 cut(s) | 319, 1454, 1580, 1739, 1777 |
| SinI | GGWCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 786 |
| SmlI | CTYRAG | 2 cut(s) | 897, 1484 |
| SmoI | CTYRAG | 2 cut(s) | 897, 1484 |
| SseBI | AGGCCT | 1 cut(s) | 1637 |
| SsiI | CCGC | 4 cut(s) | 332, 443, 1308, 1630 |
| SspI | AATATT | 1 cut(s) | 373 |
| StuI | AGGCCT | 1 cut(s) | 1637 |
| StyD4I | CCNGG | 2 cut(s) | 388, 827 |
| StyI | CCWWGG | 2 cut(s) | 1086, 1616 |
| TaaI | ACNGT | 8 cut(s) | 54, 181, 499, 971, 1266, 1288, 1525, 1799 |
| TaqI | TCGA | 4 cut(s) | 183, 1455, 1740, 1876 |
| TatI | WGTACW | 1 cut(s) | 1803 |
| TauI | GCSGC | 1 cut(s) | 1311 |
| TfiI | GAWTC | 4 cut(s) | 40, 950, 1033, 1508 |
| Tru1I | TTAA | 9 cut(s) | 78, 771, 990, 1046, 1268, 1467, 1668, 1794, 1863 |
| Tru9I | TTAA | 9 cut(s) | 78, 771, 990, 1046, 1268, 1467, 1668, 1794, 1863 |
| TscAI | CASTG | 5 cut(s) | 1192, 1528, 1720, 1827, 1902 |
| TseFI | GTSAC | 4 cut(s) | 541, 965, 1640, 1655 |
| TseI | GCWGC | 1 cut(s) | 302 |
| Tsp45I | GTSAC | 4 cut(s) | 541, 965, 1640, 1655 |
| TspDTI | ATGAA | 8 cut(s) | 672, 711, 807, 834, 907, 971, 1404, 1665 |
| TspGWI | ACGGA | 4 cut(s) | 290, 560, 798, 1281 |
| TspRI | CASTG | 5 cut(s) | 1192, 1528, 1720, 1827, 1902 |
| VpaK11BI | GGWCC | 5 cut(s) | 277, 562, 667, 1097, 1402 |
| VspI | ATTAAT | 1 cut(s) | 771 |
| XapI | RAATTY | 4 cut(s) | 752, 958, 1076, 1547 |
| XceI | RCATGY | 1 cut(s) | 358 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1132 |
| Zsp2I | ATGCAT | 1 cut(s) | 1371 |