Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0012648

Physical Location & Seq

Genomic Coordinates Forward (+)

10045422 .. 10048846

Gene Structure 3425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g09030.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGGCTCAGAACCATGAGAGGGTGCCAGAGAATCTGAGAAAACAGTTTGCTGTTGCTGTGAGGAGTATTAAGTGGAGCTATGCAATTTTCTGGTCCTTGTCAACTACACAACAAGGGGTGCTGGAATGGGGTGAAGGGTACTACAATGGAGACATCAAAACCCGAAAGACAGTTGAAGGCGTGGAAATTAAAACCGATAAAATGGGTTTACAGAGGAATGTGCAACTCAGAGAGCTGTATAAGTCTCTTCTAGACGGTGAGACTGAGGCTGAGCAGCAAGCTAAGGCGCCTTCTGCTGCATTGTCCCCGGAAGATCTCTATGAAGGATATGAAACAGATGCCGAGTGGTATTACTTGCTTTGCATGTCCTTCGTATTCAATCCTGGCGAAGGTTTGCCAGGAAGAGCACTGGCAACTGGGCAGACCATTTGGTTGTGCAATGCTCAACATGCGGATAGTAAAGTTTTCTCTCGCTCTTTGCTGGCGAAGAGTGCATCTGTTCAGACTGTAGTCTGCTTTCCCTACCTGGGGGGTGTCGTTGAGCTAGGTGTGACTGAGCTGGTAATGGAGGACCTTAATCTCATTCAACACATCAAGGCTTCCTTACTAGATTTTTCAAAGCCTGATTGCTGTGAGAAATCTTCCTCTGCCCCTCATAAAGCAGACGATGATTCAGAGCAAATAGTTGCCAAGGTTGACCATGACGTAGTTGATACATTGGATTTACAGAACCTATATTCCCCTTCGGAAGAAATCAAATTTCATCACAGGGGAATTAACGATTTACATGGAAACCATGAAGAGGTCAACATGGACTCTCCTTATGGATGTTCTAATGGTTGTGATCACAATCATCAGACAGAAGACTCCATGATGCTTGAAGGTACCAATGCGGCTTCTCAGGTTCAGAGTTGGCATTTCATGGATGAAGACTTCAGTGTTCAAGATTCCATGAATTCTAGTGACTGCATATCTGAAGCTTTTGTTAATCAAGGAAAGGCTCACTCTTCTGCTAAATGCGAGAATGCGAACCATGTCAATGTAAAGGAACTTCAAAACTTCAATGACACAAAGCTAAATTCCTTGGATCTCGGATCTGTTGATGAACATGTACACTACAAAAGAACTCTTTCTGCTCTTCTGGCAAGCTCAACGAAGTTGATTGAAAATCCATGTTTTTGTGATGGAGATTGCAAATCCAGTTTTATGAAATGGAAGAAAGGAGTTGTTGGTGGTTGTAGGCCGACAGTACATCAGAAGATATTAAAGAAGATTCTGTTCACAGTTCCTTTAATGTCTGGTGTTCGCTCTCCTAGGGCGACCGGAAAAGAAAATACGGGAAAAAATGTGCTTCCGAATTTGCAAGGTGACGATATTCACAGGGAACATGATAAAATGAGAGAGAGTGAAAAATTGTTTGTCCTCAGGTCAATGGTTCCTTCTATCACTGAGGTTGATAAAGCTTCGATCCTTGATGATACGATCAAGTACTTGAAAGAGCTTGGGGCACGAGCAGAAGAGATGGAATCCTCCATGGACACTGTGGAAGCGATTGCTAGAAGGAAATTCCTGAACAGGGTAGAGAAGACATCAATCAACTATGATAAAACAAAGATGGACAATGTGAAAAAGTCTTTATTAAACAAGAGAAAGGCCTGTGACATCGACGAAACTGACCCGTATCTCAATAGGCTTGTTCCCGGAGAAAGCTTGCCACTAGATGTGAAAGTGTGTGTAAAAGAGCAGGAGGTTGTGATAGGGATGAGATGCCCCTACCGGGAATATATCTTGCTTGATATAATGGATGCCATCAACAATCTGTACTTAGATGCACACTCTGTCCAATCATCCACCCTTGACGGTGTTCTCACGTTGAACCTTAAATCAAAGTTTCGAGGAGCGGCGATCTCACCGGTGGGGATGATTAAGCAGGCGCTTTGGAAAATTGCCGGCAAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

654

Amino Acids

73.13

Weight (kDa)

5.63

Isoelectric Point (pI)

40.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012648)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g14230 FvH4_7g14230 FvH4_7g14230
malus_domestica	MD01G1060200.v1.1 MD07G1137500.v1.1
prunus_persica	Prupe.2G170100_v2.0.a1 Prupe.2G170100_v2.0.a1
pyrus_communis	pycom01g09030 pycom07g13540
rosa_chinensis	RchiOBHm_Chr1g0355211
rosa_laevigata	RLG00000028171
rosa_multiflora	Rmu_sc0003115.1_g000041
rosa_roxburghii	Rroxscaffold_4G00300600
rosa_rugosa	Rorug01G0245600
rosa_samantha	Rh1AG258000 Rh1BG227600 Rh1CG241700 Rh1DG255400
rosa_wichuraiana	Rw1G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	884
AccB1I	GGYRCC	3 cut(s)	22, 286, 884
AccBSI	CCGCTC	1 cut(s)	1901
AciI	CCGC	3 cut(s)	452, 893, 1901
AclWI	GGATC	3 cut(s)	1095, 1102, 1462
AcsI	RAATTY	5 cut(s)	758, 955, 1078, 1357, 1565
AcuI	CTGAAG	2 cut(s)	919, 996
AcyI	GRCGYC	1 cut(s)	287
AfaI	GTAC	6 cut(s)	140, 886, 1113, 1251, 1490, 1823
AfiI	CCNNNNNNNGG	7 cut(s)	19, 389, 527, 528, 802, 1576, 1777
AflIII	ACRYGT	1 cut(s)	1108
AgeI	ACCGGT	1 cut(s)	1912
AjnI	CCWGG	3 cut(s)	382, 397, 525
AloI	GAACNNNNNNTCC	2 cut(s)	722, 754
Alw21I	GWGCWC	1 cut(s)	409
Alw26I	GTCTC	3 cut(s)	144, 249, 254
AlwI	GGATC	3 cut(s)	1095, 1102, 1462
AoxI	GGCC	2 cut(s)	1241, 1653
ApeKI	GCWGC	2 cut(s)	274, 296
ApoI	RAATTY	5 cut(s)	758, 955, 1078, 1357, 1565
AsiGI	ACCGGT	1 cut(s)	1912
Asp700I	GAANNNNTTC	1 cut(s)	1129
Asp718I	GGTACC	1 cut(s)	884
AspA2I	CCTAGG	1 cut(s)	1313
AspLEI	GCGC	2 cut(s)	289, 1936
AspS9I	GGNCC	2 cut(s)	93, 571
AsuC2I	CCSGG	3 cut(s)	308, 1701, 1778
AsuHPI	GGTGA	4 cut(s)	143, 269, 1379, 1902
AvaII	GGWCC	2 cut(s)	93, 571
AvrII	CCTAGG	1 cut(s)	1313
AxyI	CCTNAGG	1 cut(s)	1424
BaeGI	GKGCMC	1 cut(s)	1510
BanI	GGYRCC	3 cut(s)	22, 286, 884
BarI	GAAGNNNNNNTAC	2 cut(s)	1035, 1067
BauI	CACGAG	1 cut(s)	1509
BbsI	GAAGAC	3 cut(s)	870, 936, 1592
Bbv12I	GWGCWC	1 cut(s)	409
BbvI	GCAGC	2 cut(s)	283, 286
BccI	CCATC	4 cut(s)	1178, 1516, 1609, 1817
BcgI	CGANNNNNNTGC	2 cut(s)	352, 386
BciT130I	CCWGG	3 cut(s)	384, 399, 527
BclI	TGATCA	1 cut(s)	844
BcnI	CCSGG	3 cut(s)	308, 1701, 1778
BcoDI	GTCTC	3 cut(s)	144, 249, 254
BfaI	CTAG	7 cut(s)	251, 545, 608, 960, 1314, 1557, 1718
BfmI	CTRYAG	1 cut(s)	507
BfoI	RGCGCY	2 cut(s)	290, 1937
BglII	AGATCT	1 cut(s)	313
BisI	GCNGC	4 cut(s)	275, 297, 894, 1902
BlnI	CCTAGG	1 cut(s)	1313
BlpI	GCTNAGC	1 cut(s)	270
BlsI	GCNGC	4 cut(s)	276, 298, 895, 1903
BmcAI	AGTACT	1 cut(s)	1490
Bme1390I	CCNGG	6 cut(s)	308, 384, 399, 527, 1701, 1778
Bme18I	GGWCC	2 cut(s)	93, 571
BmgT120I	GGNCC	2 cut(s)	93, 571
BmiI	GGNNCC	4 cut(s)	24, 288, 886, 1437
BmrFI	CCNGG	6 cut(s)	308, 384, 399, 527, 1701, 1778
BmrI	ACTGGG	1 cut(s)	426
BmsI	GCATC	6 cut(s)	328, 503, 864, 1757, 1795, 1819
BmuI	ACTGGG	1 cut(s)	426
BoxI	GACNNNNGTC	1 cut(s)	509
BpiI	GAAGAC	3 cut(s)	870, 936, 1592
Bpu10I	CCTNAGC	1 cut(s)	282
Bpu1102I	GCTNAGC	1 cut(s)	270
BpuMI	CCSGG	3 cut(s)	308, 1701, 1778
BsaBI	GATNNNNATC	1 cut(s)	849
BsaHI	GRCGYC	1 cut(s)	287
BsaJI	CCNNGG	6 cut(s)	306, 526, 690, 1083, 1313, 1533
BsaWI	WCCGGW	2 cut(s)	1322, 1912
Bsc4I	CCNNNNNNNGG	7 cut(s)	19, 389, 527, 528, 802, 1576, 1777
Bse118I	RCCGGY	2 cut(s)	1912, 1949
Bse1I	ACTGG	3 cut(s)	414, 421, 1200
Bse21I	CCTNAGG	1 cut(s)	1424
Bse3DI	GCAATG	1 cut(s)	445
Bse8I	GATNNNNATC	1 cut(s)	849
BseBI	CCWGG	3 cut(s)	384, 399, 527
BseDI	CCNNGG	6 cut(s)	306, 526, 690, 1083, 1313, 1533
BseGI	GGATG	6 cut(s)	833, 931, 1767, 1810, 1847, 1926
BseJI	GATNNNNATC	1 cut(s)	849
BseLI	CCNNNNNNNGG	7 cut(s)	19, 389, 527, 528, 802, 1576, 1777
BseMI	GCAATG	1 cut(s)	445
BseMII	CTCAG	9 cut(s)	20, 26, 241, 255, 261, 546, 914, 1438, 1440
BseNI	ACTGG	3 cut(s)	414, 421, 1200
BseRI	GAGGAG	2 cut(s)	76, 1911
BseSI	GKGCMC	1 cut(s)	1510
BseXI	GCAGC	2 cut(s)	283, 286
Bsh1285I	CGRYCG	1 cut(s)	1323
BshFI	GGCC	2 cut(s)	1243, 1655
BshNI	GGYRCC	3 cut(s)	22, 286, 884
BshTI	ACCGGT	1 cut(s)	1912
BsiEI	CGRYCG	1 cut(s)	1323
BsiHKAI	GWGCWC	1 cut(s)	409
BsiSI	CCGG	6 cut(s)	308, 1323, 1701, 1777, 1913, 1950
BslFI	GGGAC	1 cut(s)	289
BslI	CCNNNNNNNGG	7 cut(s)	19, 389, 527, 528, 802, 1576, 1777
BsmAI	GTCTC	3 cut(s)	144, 249, 254
BsmFI	GGGAC	1 cut(s)	289
BsmI	GAATGC	1 cut(s)	1030
BsnI	GGCC	2 cut(s)	1243, 1655
Bsp1286I	GDGCHC	2 cut(s)	409, 1510
Bsp1407I	TGTACA	1 cut(s)	1111
Bsp143I	GATC	7 cut(s)	313, 844, 1087, 1094, 1467, 1482, 1905
Bsp1720I	GCTNAGC	1 cut(s)	270
Bsp19I	CCATGG	1 cut(s)	1533
BspACI	CCGC	3 cut(s)	452, 893, 1901
BspANI	GGCC	2 cut(s)	1243, 1655
BspCNI	CTCAG	9 cut(s)	19, 27, 240, 256, 262, 547, 913, 1437, 1441
BspLI	GGNNCC	4 cut(s)	24, 288, 886, 1437
BspPI	GGATC	3 cut(s)	1095, 1102, 1462
BspQI	GCTCTTC	2 cut(s)	397, 1143
BspT107I	GGYRCC	3 cut(s)	22, 286, 884
BsrBI	CCGCTC	1 cut(s)	1901
BsrDI	GCAATG	1 cut(s)	445
BsrFI	RCCGGY	2 cut(s)	1912, 1949
BsrGI	TGTACA	1 cut(s)	1111
BsrI	ACTGG	3 cut(s)	414, 421, 1200
BssAI	RCCGGY	2 cut(s)	1912, 1949
BssECI	CCNNGG	6 cut(s)	306, 526, 690, 1083, 1313, 1533
BssMI	GATC	7 cut(s)	313, 844, 1087, 1094, 1467, 1482, 1905
BssNI	GRCGYC	1 cut(s)	287
BssSI	CACGAG	1 cut(s)	1509
BssT1I	CCWWGG	4 cut(s)	690, 1083, 1313, 1533
Bst2BI	CACGAG	1 cut(s)	1509
Bst2UI	CCWGG	3 cut(s)	384, 399, 527
Bst4CI	ACNGT	8 cut(s)	45, 172, 257, 508, 1249, 1285, 1543, 1862
Bst6I	CTCTTC	7 cut(s)	252, 397, 482, 795, 1012, 1143, 1512
BstACI	GRCGYC	1 cut(s)	287
BstAUI	TGTACA	1 cut(s)	1111
BstC8I	GCNNGC	6 cut(s)	279, 483, 1147, 1712, 1932, 1951
BstDSI	CCRYGG	1 cut(s)	1533
BstENI	CCTNNNNNAGG	1 cut(s)	387
BstF5I	GGATG	6 cut(s)	833, 931, 1767, 1810, 1847, 1926
BstH2I	RGCGCY	2 cut(s)	290, 1937
BstHHI	GCGC	2 cut(s)	289, 1936
BstKTI	GATC	7 cut(s)	316, 847, 1090, 1097, 1470, 1485, 1908
BstMAI	GTCTC	3 cut(s)	144, 249, 254
BstMBI	GATC	7 cut(s)	313, 844, 1087, 1094, 1467, 1482, 1905
BstMCI	CGRYCG	1 cut(s)	1323
BstMWI	GCNNNNNNNGC	4 cut(s)	293, 449, 491, 1142
BstNI	CCWGG	3 cut(s)	384, 399, 527
BstNSI	RCATGY	3 cut(s)	367, 452, 1112
BstPAI	GACNNNNGTC	1 cut(s)	509
BstSCI	CCNGG	6 cut(s)	306, 382, 397, 525, 1699, 1776
BstSFI	CTRYAG	1 cut(s)	507
BstSLI	GKGCMC	1 cut(s)	1510
BstV1I	GCAGC	2 cut(s)	283, 286
BstV2I	GAAGAC	3 cut(s)	870, 936, 1592
BstX2I	RGATCY	3 cut(s)	313, 1087, 1094
BstYI	RGATCY	3 cut(s)	313, 1087, 1094
Bsu36I	CCTNAGG	1 cut(s)	1424
BsuRI	GGCC	2 cut(s)	1243, 1655
BtgI	CCRYGG	1 cut(s)	1533
BtsCI	GGATG	6 cut(s)	833, 931, 1767, 1810, 1847, 1926
BtsIMutI	CAGTG	4 cut(s)	407, 943, 1446, 1539
Cac8I	GCNNGC	6 cut(s)	279, 483, 1147, 1712, 1932, 1951
CfoI	GCGC	2 cut(s)	289, 1936
Cfr10I	RCCGGY	2 cut(s)	1912, 1949
Cfr13I	GGNCC	2 cut(s)	93, 571
Csp6I	GTAC	6 cut(s)	139, 885, 1112, 1250, 1489, 1822
CspAI	ACCGGT	1 cut(s)	1912
CviQI	GTAC	6 cut(s)	139, 885, 1112, 1250, 1489, 1822
DinI	GGCGCC	1 cut(s)	288
DpnI	GATC	7 cut(s)	315, 846, 1089, 1096, 1469, 1484, 1907
DpnII	GATC	7 cut(s)	313, 844, 1087, 1094, 1467, 1482, 1905
Eam1104I	CTCTTC	7 cut(s)	252, 397, 482, 795, 1012, 1143, 1512
EarI	CTCTTC	7 cut(s)	252, 397, 482, 795, 1012, 1143, 1512
Eco130I	CCWWGG	4 cut(s)	690, 1083, 1313, 1533
Eco147I	AGGCCT	1 cut(s)	1655
Eco47I	GGWCC	2 cut(s)	93, 571
Eco57I	CTGAAG	2 cut(s)	919, 996
Eco81I	CCTNAGG	1 cut(s)	1424
EcoNI	CCTNNNNNAGG	1 cut(s)	387
EcoO109I	RGGNCCY	1 cut(s)	571
EcoRI	GAATTC	1 cut(s)	955
EcoRII	CCWGG	3 cut(s)	382, 397, 525
EcoT14I	CCWWGG	4 cut(s)	690, 1083, 1313, 1533
EgeI	GGCGCC	1 cut(s)	288
EheI	GGCGCC	1 cut(s)	288
ErhI	CCWWGG	4 cut(s)	690, 1083, 1313, 1533
FalI	AAGNNNNNCTT	2 cut(s)	587, 619
FaqI	GGGAC	1 cut(s)	289
FbaI	TGATCA	1 cut(s)	844
Fnu4HI	GCNGC	4 cut(s)	275, 297, 894, 1902
FokI	GGATG	6 cut(s)	840, 938, 1774, 1817, 1834, 1933
Fsp4HI	GCNGC	4 cut(s)	275, 297, 894, 1902
FspBI	CTAG	7 cut(s)	251, 545, 608, 960, 1314, 1557, 1718
GlaI	GCGC	2 cut(s)	288, 1935
GluI	GCNGC	4 cut(s)	275, 297, 894, 1902
HaeII	RGCGCY	2 cut(s)	290, 1937
HaeIII	GGCC	2 cut(s)	1243, 1655
HapII	CCGG	6 cut(s)	308, 1323, 1701, 1777, 1913, 1950
HhaI	GCGC	2 cut(s)	289, 1936
Hin1I	GRCGYC	1 cut(s)	287
Hin6I	GCGC	2 cut(s)	287, 1934
HinP1I	GCGC	2 cut(s)	287, 1934
HincII	GTYRAC	3 cut(s)	102, 697, 808
HindII	GTYRAC	3 cut(s)	102, 697, 808
HindIII	AAGCTT	3 cut(s)	978, 1461, 1708
HinfI	GANTC	7 cut(s)	31, 671, 815, 866, 947, 1273, 1526
HpaII	CCGG	6 cut(s)	308, 1323, 1701, 1777, 1913, 1950
HphI	GGTGA	4 cut(s)	143, 269, 1379, 1902
Hpy166II	GTNNAC	6 cut(s)	102, 209, 697, 808, 1114, 1281
Hpy188III	TCNNGA	3 cut(s)	251, 944, 1570
Hpy8I	GTNNAC	6 cut(s)	102, 209, 697, 808, 1114, 1281
Hpy99I	CGWCG	1 cut(s)	1670
HpyCH4III	ACNGT	8 cut(s)	45, 172, 257, 508, 1249, 1285, 1543, 1862
HpyCH4IV	ACGT	2 cut(s)	705, 1871
HpyF10VI	GCNNNNNNNGC	4 cut(s)	293, 449, 491, 1142
HpySE526I	ACGT	2 cut(s)	705, 1871
Hsp92I	GRCGYC	1 cut(s)	287
HspAI	GCGC	2 cut(s)	287, 1934
KasI	GGCGCC	1 cut(s)	286
KpnI	GGTACC	1 cut(s)	888
KroI	GCCGGC	1 cut(s)	1949
KroNI	GCCGGC	1 cut(s)	1951
Ksp22I	TGATCA	1 cut(s)	844
Kzo9I	GATC	7 cut(s)	313, 844, 1087, 1094, 1467, 1482, 1905
LguI	GCTCTTC	2 cut(s)	397, 1143
LmnI	GCTCC	2 cut(s)	75, 1898
Lsp1109I	GCAGC	2 cut(s)	283, 286
LweI	GCATC	6 cut(s)	328, 503, 864, 1757, 1795, 1819
MaeI	CTAG	7 cut(s)	251, 545, 608, 960, 1314, 1557, 1718
MaeII	ACGT	2 cut(s)	705, 1871
MaeIII	GTNAC	4 cut(s)	550, 962, 1367, 1658
MalI	GATC	7 cut(s)	315, 846, 1089, 1096, 1469, 1484, 1907
MbiI	CCGCTC	1 cut(s)	1901
MboI	GATC	7 cut(s)	313, 844, 1087, 1094, 1467, 1482, 1905
MflI	RGATCY	3 cut(s)	313, 1087, 1094
MhlI	GDGCHC	2 cut(s)	409, 1510
Mly113I	GGCGCC	1 cut(s)	287
MlyI	GAGTC	2 cut(s)	809, 860
MroNI	GCCGGC	1 cut(s)	1949
MroXI	GAANNNNTTC	1 cut(s)	1129
MslI	CAYNNNNRTG	1 cut(s)	1038
MspI	CCGG	6 cut(s)	308, 1323, 1701, 1777, 1913, 1950
MspR9I	CCNGG	6 cut(s)	308, 384, 399, 527, 1701, 1778
Mva1269I	GAATGC	1 cut(s)	1030
MvaI	CCWGG	3 cut(s)	384, 399, 527
MwoI	GCNNNNNNNGC	4 cut(s)	293, 449, 491, 1142
NaeI	GCCGGC	1 cut(s)	1951
NarI	GGCGCC	1 cut(s)	287
NciI	CCSGG	3 cut(s)	308, 1701, 1778
NcoI	CCATGG	1 cut(s)	1533
NdeII	GATC	7 cut(s)	313, 844, 1087, 1094, 1467, 1482, 1905
NgoMIV	GCCGGC	1 cut(s)	1949
NlaIV	GGNNCC	4 cut(s)	24, 288, 886, 1437
NmeAIII	GCCGAG	1 cut(s)	367
NmuCI	GTSAC	4 cut(s)	550, 962, 1367, 1658
NspI	RCATGY	3 cut(s)	367, 452, 1112
PceI	AGGCCT	1 cut(s)	1655
PciI	ACATGT	1 cut(s)	1108
PciSI	GCTCTTC	2 cut(s)	397, 1143
PctI	GAATGC	1 cut(s)	1030
PdiI	GCCGGC	1 cut(s)	1951
PdmI	GAANNNNTTC	1 cut(s)	1129
PfeI	GAWTC	5 cut(s)	31, 671, 947, 1273, 1526
PfoI	TCCNGGA	1 cut(s)	1699
PinAI	ACCGGT	1 cut(s)	1912
PkrI	GCNGC	4 cut(s)	276, 298, 895, 1903
PleI	GAGTC	2 cut(s)	809, 860
PluTI	GGCGCC	1 cut(s)	290
PpsI	GAGTC	2 cut(s)	809, 860
PpuMI	RGGWCCY	1 cut(s)	571
PscI	ACATGT	1 cut(s)	1108
PshAI	GACNNNNGTC	1 cut(s)	509
Psp5II	RGGWCCY	1 cut(s)	571
Psp6I	CCWGG	3 cut(s)	382, 397, 525
PspGI	CCWGG	3 cut(s)	382, 397, 525
PspN4I	GGNNCC	4 cut(s)	24, 288, 886, 1437
PspPI	GGNCC	2 cut(s)	93, 571
PspPPI	RGGWCCY	1 cut(s)	571
PsuI	RGATCY	3 cut(s)	313, 1087, 1094
RsaI	GTAC	6 cut(s)	140, 886, 1113, 1251, 1490, 1823
RsaNI	GTAC	6 cut(s)	139, 885, 1112, 1250, 1489, 1822
RseI	CAYNNNNRTG	1 cut(s)	1038
SapI	GCTCTTC	2 cut(s)	397, 1143
SatI	GCNGC	4 cut(s)	275, 297, 894, 1902
Sau3AI	GATC	7 cut(s)	313, 844, 1087, 1094, 1467, 1482, 1905
Sau96I	GGNCC	2 cut(s)	93, 571
ScaI	AGTACT	1 cut(s)	1490
SchI	GAGTC	2 cut(s)	809, 860
ScrFI	CCNGG	6 cut(s)	308, 384, 399, 527, 1701, 1778
SduI	GDGCHC	2 cut(s)	409, 1510
SfaNI	GCATC	6 cut(s)	328, 503, 864, 1757, 1795, 1819
SfcI	CTRYAG	1 cut(s)	507
SfoI	GGCGCC	1 cut(s)	288
SgrAI	CRCCGGYG	1 cut(s)	1912
SinI	GGWCC	2 cut(s)	93, 571
SmiMI	CAYNNNNRTG	1 cut(s)	1038
SseBI	AGGCCT	1 cut(s)	1655
SsiI	CCGC	3 cut(s)	452, 893, 1901
SspDI	GGCGCC	1 cut(s)	286
SspMI	CTAG	7 cut(s)	251, 545, 608, 960, 1314, 1557, 1718
StuI	AGGCCT	1 cut(s)	1655
StyD4I	CCNGG	6 cut(s)	306, 382, 397, 525, 1699, 1776
StyI	CCWWGG	4 cut(s)	690, 1083, 1313, 1533
TaaI	ACNGT	8 cut(s)	45, 172, 257, 508, 1249, 1285, 1543, 1862
TaiI	ACGT	2 cut(s)	708, 1874
TaqI	TCGA	3 cut(s)	1466, 1665, 1894
TatI	WGTACW	4 cut(s)	1111, 1249, 1488, 1821
TauI	GCSGC	2 cut(s)	896, 1904
TfiI	GAWTC	5 cut(s)	31, 671, 947, 1273, 1526
TscAI	CASTG	4 cut(s)	414, 943, 1453, 1546
TseFI	GTSAC	4 cut(s)	550, 962, 1367, 1658
TseI	GCWGC	2 cut(s)	274, 296
Tsp45I	GTSAC	4 cut(s)	550, 962, 1367, 1658
TspDTI	ATGAA	9 cut(s)	336, 345, 752, 813, 910, 942, 968, 1119, 1223
TspRI	CASTG	4 cut(s)	414, 943, 1453, 1546
VpaK11BI	GGWCC	2 cut(s)	93, 571
XagI	CCTNNNNNAGG	1 cut(s)	387
XapI	RAATTY	5 cut(s)	758, 955, 1078, 1357, 1565
XbaI	TCTAGA	1 cut(s)	250
XceI	RCATGY	3 cut(s)	367, 452, 1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1540
XmaJI	CCTAGG	1 cut(s)	1313
XmnI	GAANNNNTTC	1 cut(s)	1129
XspI	CTAG	7 cut(s)	251, 545, 608, 960, 1314, 1557, 1718
ZrmI	AGTACT	1 cut(s)	1490

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.