Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0002101

Physical Location & Seq

Genomic Coordinates Forward (+)

26989141 .. 26997484

Gene Structure 8344 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1165900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3723 bp

ATGGATCTTGAGAGAATTAAGTGTTATGACACTCCAAAGAAGGATTCTTGGAAGAATATTATGCTGTTGGCCTACCAGAGCCTTGGAGTAGTGTATGGTGACCTGAGCATTTCCCCTCTCTATGTTTACAAGAGTGCATTTGCAGAAGACATTCAACATTCGGATACGAATGAAGAGATTTATGGTGTACTTTCTTTTGTCTTCTGGACTCTTACTTTAGTCCCGCTGTTCAAGTATGTCTTTATAGTCCTTCGGGCTGATGATAATGGAGAGGGTGGTACATTTGCACTGTATTCGTTGATATGTAGGCATGCGAAAGTAAGCCTTCTGCCCAACCGGCAGCTTGCTGATGAGGCCCTTTCTACTTATAAATTGGAGCACCCACCGGAGAAGGAAAAAAGTTCAAGGGTGAAACTTGTACTTGAGAAGTGCAAGACCTTGCACACTGCTTTGCTAATTCTTGTTCTTCTTGGAACTTGTATGGTAATTGGCGATGGCGTGCTCACTCCAGCCATTTCAGTCTTTTCTGCGGTGTCTGGCCTCGAATTATCCATGTCCAAGGAGCATCACCAGTATGCTGTGGTTCCAATTACTTGTTTCATATTGTTATGTCTATTTGCACTTCAACACTATGGCACCCATCGAATCGGATTCTTTTTTGCACCAGTGGTGTTGGCATGGCTTCTGTGCATCAGTGCTCTTGGCTTGTATAATATAATCCACTGGAACCAGCATGTCTATCAAGCTCTGTCTCCTTATTACATGTTCAAGTTCTTGAGGAAGACAAGGATAAGTGGGTGGATGTCTCTAGGTGGAATATTGCTGTGCATAACAGGCGCAGAGGCAATGTTTGCTGATCTTGGCCACTTCTCATATAATGCCATTCAGGTTGCTTTTACCTTTTTGGTTTATCCAGCTCTTATATTGGCATATATGGGGCAGGCTGCTTACTTATCGCAACATCACCACACCAGTCACCGAATCAGTTTCTATGTCTCGGTTCCAGAAAGTGTGAGATGGCCGGTGCTTGTACTAGCCATTCTTGCTTCTGTTGTGGGAAGCCAAGCAATCATCAGCGGAACATTTTCTATCATAAACCAGAGCCAATCATTAGGTTGTTTTCCGAGAGTCAAGGTCATCCACACTTCTGACAAGGTACATGGCCAGATATACATCCCCGAGATCAATTGGATGCTCATGATCCTCTGCATTGCAGTGACCATTGGATTTAGAGACACAAAACACCTGGGAAATGCTTCTGGGCTAGCAGTGATGACAGTTATGTTGGTTACCACATGCCTCACTTCCTTGGTGATTATCATTTGTTGGCACAAGCCGCCTATTGTAGCCCTTTGCTTCCTAATCTTCTTTGGCTCCATTGAATTGCTCTACTTCTCAGCTTCGCTCACCAAGTTCCGAGAGGGTGCCTGGCTTCCCATCCTTCTTGCGCTGTTCCTCATGACTATCATGTTTGTATGGCACTATGGAACCATCAAGAAGTACGAATATGACCTCCACAACAAGGTTTCATTAGACTGGCTTCTAGCTTTGGGTCCAAGCTTGGGAATCGCTCGGGTCCCTGGCATTGGCCTAGTGTTCACAGATCTCACCTCCGGCATTCCTGCTAACTTCTCCCGCTTTGTAACCAACCTCCCTGCTTTCCACCGCATCCTAGTTTTCGTGTGTGTAAAATCAGTCCCAGTCCCATATGTGCCGCCTGCTGAACGATACTTGGTGGGTCGCATTGGTCCTGCAGCTCATCGGTCCTACAGGTGCATTGTTCGTTATGGATACCGTGATGTTCATCAAGATGTTGACTCCTTTGAAACAGAACTAGTTGAAAGGCTGGTTGATTTCATCCGATATGACTGGTGGCGAACACAGAGAACCAGCTCATGTACCGAGGATGATGCATCAAGGTCTACTGACACGAGCGAGTGTGGACTAGCTGTCATCGGAACAGTAGCATTTTCTGGTGCACCAGCTTATGAGATTGAGGAGACTCAACCGGCAAGTGTATCTGCTGGTTTCCCAACTATAGAAAGTATAGCAGAAGTTATTGAGATGGAACCGGTGGAAAGAAGAGTGAGGTTTGTTATCGACGAGGAGTCTCAGCCTGACACCCGGCCTGAGAATACAATGCAGATGCGCGAAGAGCTTGAGGATCTCTACGCAGCTCAACAGGCTGGGACTGCATTTATACTTGGGCACTCACACATAAAAGCCAAGCAAGGGTCGTCCTTTATGAAGAGATTCGCCATTAACTTCGGTTATAACTGCCTGAGGAGGAATTGCAGGGGGGCAGACGTGGCGCTGAAGGTCCCTCCGGTGTCTCTTCTCGAGGTTGGCATGGTTTATATTCATGGGGCTCTGAGAAGGAAAATTGGAGGGACGTACAAGGATTTCTTCGAAGACTATGTCGAGGTGGATGGGAAATATGTGGAGGAGGGGTGGGTGGACAAAACGTTCAAGGTTTGCAAGAAAGATACGGGTGGCGAGCCCAGGGAAGTGGACAAGCTTGGAAGATATGTTCATAACTTGTCTAATCGATCCTGTGTTCTTGAATCATTCTTTGCGATGGCCCGTAATCTTCTGTTGCTTTGTCTCGCCTTCTTTGTCACGCTTTCGACAGCACTCAGTTCTCCAATCGGAGTATGCTATGGAATGCTAGGTAACGACTTGCCACCACCAACAGAAGTAATCAACATGTACAAACTGAATCAAATCGGTCTAATGAGACTCTACGATCCAAACCACGAAGCGCTCGAGGCCCTTCGTGGTTCTGGCATTAACGTCGTAGTTGGAGTTCGTAATGATGAACTTCAACAACTTGCAAGCACTGAATCCGCTGCTGGGGACTGGGTAGCAGCTTACATTCGTCCTTATTGGCCGCAAGTCAATTTTCGATACATAGCCGTTGGGAACGAGGTCATCCCAGGAGAGGTTGCAAAATACGTCCTCCCAGCAATGCAAAACTTGCACAATGCATTGAGCTCCTGGGTTCTTAACTCTATTGAGCAAATAAAGGTCTCGACCGCAGTTGCAATGTCGGTACTGGGTGAGTCTTACCCTCCCTCGGCCGCAACATTTTCTCAGGACACCGCGGAGTATATGGTTCCGATCGCACGATACTTGAACAACATTGGTGCACCGTTGCTAGTCAATGTGTACCCTTACTTTACCTACGTTGAAAACCCTAGCGACGTTTCACTACCTTATGCATTGTTCGCTTCCGAAAACGCTGTAGTGACAGATGATGGTCTGAGTTATTACAACCTGTTTGATGCCATGGTGGATGCGGTTTATGCATCGTTGGAGAAAGCAGGCGCACCCCAAGTCCGAGTGGTGGTGTCCGAGACGGGCTGGCCCTCCGGCGGGAATGGGAACGTGACAACACCAAGCACTGCGCAAAAATACAACTCTAACCTAATTAGGCACGTCCTGTCGTCACATGGCACTCCAAGGCGGCCGGGAAAGTCCGTCGAGACTTACTTGTTTGCCATGTTTAACGAGAACATGAAATCTGGTGAAGCAGTGGAGCGACAATGGGGTCTGTTTTATCCGAACAAGAGACCCGTTTATCCTATCAATTTTGAAGAACAAAGGCTGGAGCCGGTACAAAGGATGGAGCCGGTAACGGAAAGTAATGCGAGTGCACTATTAGCTCAAAGTGCAGTTATATTGTGTCTTTGTTTAATTTCTTTTTTCTTAATTAGTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

1241

Amino Acids

138.5

Weight (kDa)

6.27

Isoelectric Point (pI)

41.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	23 - 515	1.5e-171	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	527 - 786	5e-28	K+ potassium transporter C-terminal domain
Glyco_hydro_17	PF00332	883 - 1198	1.3e-107	Glycosyl hydrolases family 17

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40540 AT2G40540 AT2G40540 AT2G40540 AT2G40540
fragaria_vesca	FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830 FvH4_7g25830
malus_domestica	MD01G1165900.v1.1 MD07G1232700.v1.1
prunus_persica	Prupe.2G263200_v2.0.a1 Prupe.2G263200_v2.0.a1 Prupe.2G263200_v2.0.a1 Prupe.2G263200_v2.0.a1 Prupe.2G263200_v2.0.a1 Prupe.2G263200_v2.0.a1 Prupe.2G263200_v2.0.a1 Prupe.2G263200_v2.0.a1
pyrus_communis	pycom01g17950 pycom07g21040
rosa_chinensis	RchiOBHm_Chr1g0372091
rosa_laevigata	RLG00000026924
rosa_multiflora	Rmu_sc0001755.1_g000029
rosa_roxburghii	Rroxscaffold_4G00285270
rosa_rugosa	Rorug01G0369200 Rorug01G0369300 Rorug01G0369400 Rorug01G0369500 Rorug01G0369600 Rorug01G0369600
rosa_samantha	Rh1AG377900 Rh1BG341300 Rh1CG354600 Rh1DG372400
rosa_wichuraiana	Rw1G033250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	369, 2274
AasI	GACNNNNNNGTC	1 cut(s)	3549
Acc16I	TGCGCA	1 cut(s)	3408
AccB1I	GGYRCC	2 cut(s)	635, 1424
AccI	GTMKAC	1 cut(s)	1922
AccII	CGCG	2 cut(s)	2151, 3104
AclI	AACGTT	1 cut(s)	2465
AclWI	GGATC	5 cut(s)	12, 1195, 2172, 2544, 2741
AcoI	YGGCCR	6 cut(s)	862, 1019, 1162, 2888, 3078, 3467
AcuI	CTGAAG	1 cut(s)	2336
AfeI	AGCGCT	1 cut(s)	2763
AflIII	ACRYGT	2 cut(s)	762, 2706
AgeI	ACCGGT	1 cut(s)	2071
AhdI	GACNNNNNGTC	2 cut(s)	1949, 2107
AhlI	ACTAGT	1 cut(s)	1834
AjiI	CACGTC	2 cut(s)	2308, 3439
AjnI	CCWGG	6 cut(s)	1245, 1427, 1579, 2501, 2935, 2996
AjuI	GAANNNNNNNTTGG	2 cut(s)	28, 60
AloI	GAACNNNNNNTCC	4 cut(s)	2450, 2482, 2514, 2546
Alw21I	GWGCWC	7 cut(s)	381, 504, 700, 1981, 2996, 3151, 3658
Alw44I	GTGCAC	3 cut(s)	1977, 3147, 3654
AlwI	GGATC	5 cut(s)	12, 1195, 2172, 2544, 2741
Ama87I	CYCGRG	4 cut(s)	1178, 1572, 2339, 2765
Aor51HI	AGCGCT	1 cut(s)	2763
ApaLI	GTGCAC	3 cut(s)	1977, 3147, 3654
ApeKI	GCWGC	6 cut(s)	340, 944, 1754, 2174, 2849, 2867
ArsI	GACNNNNNNTTYG	2 cut(s)	2403, 2435
AsiGI	ACCGGT	1 cut(s)	2071
Asp700I	GAANNNNTTC	4 cut(s)	150, 1084, 1255, 2252
AspLEI	GCGC	7 cut(s)	839, 1450, 2151, 2314, 2764, 3329, 3409
AspS9I	GGNCC	9 cut(s)	355, 1553, 1576, 1748, 1764, 2320, 2581, 2770, 3366
AsuC2I	CCSGG	2 cut(s)	2125, 3471
AsuII	TTCGAA	1 cut(s)	2409
AsuNHI	GCTAGC	1 cut(s)	1264
AvaI	CYCGRG	4 cut(s)	1178, 1572, 2339, 2765
AvaII	GGWCC	5 cut(s)	1553, 1576, 1748, 1764, 2320
AxyI	CCTNAGG	1 cut(s)	2282
BaeGI	GKGCMC	4 cut(s)	1981, 2211, 3151, 3658
BalI	TGGCCA	2 cut(s)	864, 1164
BanI	GGYRCC	2 cut(s)	635, 1424
BanII	GRGCYC	3 cut(s)	2371, 2502, 2996
BauI	CACGAG	1 cut(s)	1930
BbsI	GAAGAC	4 cut(s)	153, 193, 788, 2418
Bbv12I	GWGCWC	7 cut(s)	381, 504, 700, 1981, 2996, 3151, 3658
BbvI	GCAGC	6 cut(s)	352, 931, 1766, 2186, 2836, 2879
BceAI	ACGGC	1 cut(s)	2900
BcgI	CGANNNNNNTGC	6 cut(s)	276, 310, 1892, 1926, 2776, 2810
BciT130I	CCWGG	6 cut(s)	1247, 1429, 1581, 2503, 2937, 2998
BciVI	GTATCC	2 cut(s)	157, 1784
BcnI	CCSGG	2 cut(s)	2125, 3471
BcuI	ACTAGT	1 cut(s)	1834
BfmI	CTRYAG	4 cut(s)	1752, 1768, 2037, 3243
BfoI	RGCGCY	2 cut(s)	2315, 2765
BfuI	GTATCC	2 cut(s)	157, 1784
BglI	GCCNNNNNGGC	1 cut(s)	337
BglII	AGATCT	1 cut(s)	1603
Bme1390I	CCNGG	8 cut(s)	1247, 1429, 1581, 2125, 2503, 2937, 2998, 3471
Bme18I	GGWCC	5 cut(s)	1553, 1576, 1748, 1764, 2320
BmeRI	GACNNNNNGTC	2 cut(s)	1949, 2107
BmeT110I	CYCGRG	4 cut(s)	1178, 1572, 2339, 2765
BmgBI	CACGTC	2 cut(s)	2308, 3439
BmgT120I	GGNCC	9 cut(s)	355, 1553, 1576, 1748, 1764, 2320, 2581, 2770, 3366
BmrFI	CCNGG	8 cut(s)	1247, 1429, 1581, 2125, 2503, 2937, 2998, 3471
BmrI	ACTGGG	3 cut(s)	1694, 2869, 3065
BmtI	GCTAGC	1 cut(s)	1268
BmuI	ACTGGG	3 cut(s)	1694, 2869, 3065
BpiI	GAAGAC	4 cut(s)	153, 193, 788, 2418
BpmI	CTGGAG	2 cut(s)	492, 3629
Bpu10I	CCTNAGC	1 cut(s)	104
Bpu14I	TTCGAA	1 cut(s)	2409
BpuEI	CTTGAG	4 cut(s)	29, 443, 796, 2180
BpuMI	CCSGG	2 cut(s)	2125, 3471
Bsa29I	ATCGAT	1 cut(s)	2548
BsaBI	GATNNNNATC	2 cut(s)	1172, 1803
BsaI	GGTCTC	2 cut(s)	3034, 3565
BsaWI	WCCGGW	3 cut(s)	385, 2071, 2326
BsaXI	ACNNNNNCTCC	2 cut(s)	2435, 2465
Bse118I	RCCGGY	6 cut(s)	336, 1021, 2008, 2071, 3613, 3631
Bse1I	ACTGG	9 cut(s)	571, 665, 728, 972, 1541, 1700, 1874, 2864, 3060
Bse21I	CCTNAGG	1 cut(s)	2282
Bse3DI	GCAATG	4 cut(s)	852, 1209, 2973, 3051
Bse8I	GATNNNNATC	2 cut(s)	1172, 1803
BseBI	CCWGG	6 cut(s)	1247, 1429, 1581, 2503, 2937, 2998
BseCI	ATCGAT	1 cut(s)	2548
BseJI	GATNNNNATC	2 cut(s)	1172, 1803
BseMI	GCAATG	4 cut(s)	852, 1209, 2973, 3051
BseMII	CTCAG	9 cut(s)	95, 1410, 2121, 2126, 2273, 2363, 2650, 3107, 3254
BseNI	ACTGG	9 cut(s)	571, 665, 728, 972, 1541, 1700, 1874, 2864, 3060
BseRI	GAGGAG	4 cut(s)	2012, 2120, 2299, 2459
BseSI	GKGCMC	4 cut(s)	1981, 2211, 3151, 3658
BseX3I	CGGCCG	2 cut(s)	3078, 3467
BseXI	GCAGC	6 cut(s)	352, 931, 1766, 2186, 2836, 2879
BseYI	CCCAGC	3 cut(s)	2186, 2852, 2962
BsgI	GTGCAG	1 cut(s)	3693
Bsh1236I	CGCG	2 cut(s)	2151, 3104
Bsh1285I	CGRYCG	4 cut(s)	3036, 3081, 3123, 3470
BshNI	GGYRCC	2 cut(s)	635, 1424
BshTI	ACCGGT	1 cut(s)	2071
BshVI	ATCGAT	1 cut(s)	2548
BsiEI	CGRYCG	4 cut(s)	3036, 3081, 3123, 3470
BsiHKAI	GWGCWC	7 cut(s)	381, 504, 700, 1981, 2996, 3151, 3658
BsiHKCI	CYCGRG	4 cut(s)	1178, 1572, 2339, 2765
BslFI	GGGAC	8 cut(s)	206, 1562, 1682, 1688, 2203, 2306, 2404, 2870
BsmBI	CGTCTC	1 cut(s)	3350
BsmFI	GGGAC	8 cut(s)	206, 1562, 1682, 1688, 2203, 2306, 2404, 2870
BsmI	GAATGC	2 cut(s)	1617, 2670
Bso31I	GGTCTC	2 cut(s)	3034, 3565
BsoBI	CYCGRG	4 cut(s)	1178, 1572, 2339, 2765
Bsp119I	TTCGAA	1 cut(s)	2409
Bsp1407I	TGTACA	1 cut(s)	2709
Bsp143I	GATC	9 cut(s)	4, 856, 1182, 1200, 1603, 2164, 2549, 2746, 3120
Bsp19I	CCATGG	1 cut(s)	3288
BspCNI	CTCAG	9 cut(s)	96, 1409, 2122, 2125, 2274, 2364, 2649, 3106, 3255
BspDI	ATCGAT	1 cut(s)	2548
BspFNI	CGCG	2 cut(s)	2151, 3104
BspHI	TCATGA	2 cut(s)	1197, 1458
BspMAI	CTGCAG	1 cut(s)	1756
BspOI	GCTAGC	1 cut(s)	1268
BspPI	GGATC	5 cut(s)	12, 1195, 2172, 2544, 2741
BspQI	GCTCTTC	1 cut(s)	2148
BspT104I	TTCGAA	1 cut(s)	2409
BspT107I	GGYRCC	2 cut(s)	635, 1424
BspTNI	GGTCTC	2 cut(s)	3034, 3565
BsrDI	GCAATG	4 cut(s)	852, 1209, 2973, 3051
BsrFI	RCCGGY	6 cut(s)	336, 1021, 2008, 2071, 3613, 3631
BsrGI	TGTACA	1 cut(s)	2709
BsrI	ACTGG	9 cut(s)	571, 665, 728, 972, 1541, 1700, 1874, 2864, 3060
BssAI	RCCGGY	6 cut(s)	336, 1021, 2008, 2071, 3613, 3631
BssMI	GATC	9 cut(s)	4, 856, 1182, 1200, 1603, 2164, 2549, 2746, 3120
BssSI	CACGAG	1 cut(s)	1930
BssT1I	CCWWGG	5 cut(s)	82, 558, 1308, 3288, 3461
Bst2BI	CACGAG	1 cut(s)	1930
Bst2UI	CCWGG	6 cut(s)	1247, 1429, 1581, 2503, 2937, 2998
Bst4CI	ACNGT	5 cut(s)	291, 1279, 1796, 1963, 3153
Bst6I	CTCTTC	5 cut(s)	168, 2077, 2148, 2243, 2340
BstAPI	GCANNNNNTGC	2 cut(s)	851, 2977
BstAUI	TGTACA	1 cut(s)	2709
BstBI	TTCGAA	1 cut(s)	2409
BstDEI	CTNAG	9 cut(s)	104, 1396, 2112, 2130, 2282, 2372, 2636, 3093, 3263
BstDSI	CCRYGG	2 cut(s)	3102, 3288
BstEII	GGTNACC	2 cut(s)	98, 1288
BstFNI	CGCG	2 cut(s)	2151, 3104
BstH2I	RGCGCY	2 cut(s)	2315, 2765
BstHHI	GCGC	7 cut(s)	839, 1450, 2151, 2314, 2764, 3329, 3409
BstKTI	GATC	9 cut(s)	7, 859, 1185, 1203, 1606, 2167, 2552, 2749, 3123
BstMBI	GATC	9 cut(s)	4, 856, 1182, 1200, 1603, 2164, 2549, 2746, 3120
BstMCI	CGRYCG	4 cut(s)	3036, 3081, 3123, 3470
BstNI	CCWGG	6 cut(s)	1247, 1429, 1581, 2503, 2937, 2998
BstNSI	RCATGY	5 cut(s)	314, 737, 766, 1299, 2710
BstPI	GGTNACC	2 cut(s)	98, 1288
BstSCI	CCNGG	8 cut(s)	1245, 1427, 1579, 2123, 2501, 2935, 2996, 3469
BstSFI	CTRYAG	4 cut(s)	1752, 1768, 2037, 3243
BstSLI	GKGCMC	4 cut(s)	1981, 2211, 3151, 3658
BstUI	CGCG	2 cut(s)	2151, 3104
BstV1I	GCAGC	6 cut(s)	352, 931, 1766, 2186, 2836, 2879
BstV2I	GAAGAC	4 cut(s)	153, 193, 788, 2418
BstX2I	RGATCY	3 cut(s)	4, 1603, 2164
BstXI	CCANNNNNNTGG	2 cut(s)	83, 2509
BstYI	RGATCY	3 cut(s)	4, 1603, 2164
BstZI	CGGCCG	2 cut(s)	3078, 3467
Bsu15I	ATCGAT	1 cut(s)	2548
Bsu36I	CCTNAGG	1 cut(s)	2282
BsuI	GTATCC	2 cut(s)	157, 1784
BsuTUI	ATCGAT	1 cut(s)	2548
BtgI	CCRYGG	2 cut(s)	3102, 3288
BtgZI	GCGATG	2 cut(s)	507, 2591
BtrI	CACGTC	2 cut(s)	2308, 3439
BtsI	GCAGTG	5 cut(s)	444, 1221, 1275, 3402, 3540
CciI	TCATGA	2 cut(s)	1197, 1458
CfoI	GCGC	7 cut(s)	839, 1450, 2151, 2314, 2764, 3329, 3409
Cfr10I	RCCGGY	6 cut(s)	336, 1021, 2008, 2071, 3613, 3631
Cfr13I	GGNCC	9 cut(s)	355, 1553, 1576, 1748, 1764, 2320, 2581, 2770, 3366
Cfr42I	CCGCGG	1 cut(s)	3105
ClaI	ATCGAT	1 cut(s)	2548
CspAI	ACCGGT	1 cut(s)	2071
DdeI	CTNAG	9 cut(s)	104, 1396, 2112, 2130, 2282, 2372, 2636, 3093, 3263
DpnI	GATC	9 cut(s)	6, 858, 1184, 1202, 1605, 2166, 2551, 2748, 3122
DpnII	GATC	9 cut(s)	4, 856, 1182, 1200, 1603, 2164, 2549, 2746, 3120
DrdI	GACNNNNNNGTC	1 cut(s)	3549
DriI	GACNNNNNGTC	2 cut(s)	1949, 2107
DseDI	GACNNNNNNGTC	1 cut(s)	3549
EaeI	YGGCCR	6 cut(s)	862, 1019, 1162, 2888, 3078, 3467
EagI	CGGCCG	2 cut(s)	3078, 3467
Eam1104I	CTCTTC	5 cut(s)	168, 2077, 2148, 2243, 2340
Eam1105I	GACNNNNNGTC	2 cut(s)	1949, 2107
EarI	CTCTTC	5 cut(s)	168, 2077, 2148, 2243, 2340
Ecl136II	GAGCTC	1 cut(s)	2994
EclXI	CGGCCG	2 cut(s)	3078, 3467
Eco130I	CCWWGG	5 cut(s)	82, 558, 1308, 3288, 3461
Eco24I	GRGCYC	3 cut(s)	2371, 2502, 2996
Eco31I	GGTCTC	2 cut(s)	3034, 3565
Eco47I	GGWCC	5 cut(s)	1553, 1576, 1748, 1764, 2320
Eco47III	AGCGCT	1 cut(s)	2763
Eco52I	CGGCCG	2 cut(s)	3078, 3467
Eco53kI	GAGCTC	1 cut(s)	2994
Eco57I	CTGAAG	1 cut(s)	2336
Eco81I	CCTNAGG	1 cut(s)	2282
Eco88I	CYCGRG	4 cut(s)	1178, 1572, 2339, 2765
Eco91I	GGTNACC	2 cut(s)	98, 1288
EcoICRI	GAGCTC	1 cut(s)	2994
EcoO109I	RGGNCCY	4 cut(s)	355, 1576, 2320, 2770
EcoO65I	GGTNACC	2 cut(s)	98, 1288
EcoRII	CCWGG	6 cut(s)	1245, 1427, 1579, 2501, 2935, 2996
EcoT14I	CCWWGG	5 cut(s)	82, 558, 1308, 3288, 3461
EcoT22I	ATGCAT	4 cut(s)	1915, 2989, 3223, 3310
EcoT38I	GRGCYC	3 cut(s)	2371, 2502, 2996
ErhI	CCWWGG	5 cut(s)	82, 558, 1308, 3288, 3461
Esp3I	CGTCTC	1 cut(s)	3350
FalI	AAGNNNNNCTT	6 cut(s)	224, 256, 309, 341, 2390, 2422
FaqI	GGGAC	8 cut(s)	206, 1562, 1682, 1688, 2203, 2306, 2404, 2870
FauI	CCCGC	3 cut(s)	231, 1643, 3368
FauNDI	CATATG	1 cut(s)	1708
FblI	GTMKAC	1 cut(s)	1922
FriOI	GRGCYC	3 cut(s)	2371, 2502, 2996
FspI	TGCGCA	1 cut(s)	3408
GlaI	GCGC	7 cut(s)	838, 1449, 2150, 2313, 2763, 3328, 3408
GsaI	CCCAGC	3 cut(s)	2190, 2856, 2966
GsuI	CTGGAG	2 cut(s)	492, 3629
HaeII	RGCGCY	2 cut(s)	2315, 2765
HhaI	GCGC	7 cut(s)	839, 1450, 2151, 2314, 2764, 3329, 3409
Hin6I	GCGC	7 cut(s)	837, 1448, 2149, 2312, 2762, 3327, 3407
HinP1I	GCGC	7 cut(s)	837, 1448, 2149, 2312, 2762, 3327, 3407
HincII	GTYRAC	1 cut(s)	1816
HindII	GTYRAC	1 cut(s)	1816
HindIII	AAGCTT	2 cut(s)	1558, 2516
Hpy99I	CGWCG	4 cut(s)	2105, 2798, 3206, 3485
HpyAV	CCTTC	9 cut(s)	34, 260, 335, 385, 1451, 2311, 2370, 2620, 2783
HpyCH4III	ACNGT	5 cut(s)	291, 1279, 1796, 1963, 3153
HpyCH4IV	ACGT	9 cut(s)	2307, 2393, 2465, 2793, 2955, 3186, 3204, 3387, 3438
HpyF3I	CTNAG	9 cut(s)	104, 1396, 2112, 2130, 2282, 2372, 2636, 3093, 3263
HpySE526I	ACGT	9 cut(s)	2307, 2393, 2465, 2793, 2955, 3186, 3204, 3387, 3438
HspAI	GCGC	7 cut(s)	837, 1448, 2149, 2312, 2762, 3327, 3407
KflI	GGGWCCC	1 cut(s)	1576
KspI	CCGCGG	1 cut(s)	3105
Kzo9I	GATC	9 cut(s)	4, 856, 1182, 1200, 1603, 2164, 2549, 2746, 3120
LguI	GCTCTTC	1 cut(s)	2148
LmnI	GCTCC	7 cut(s)	376, 562, 1379, 2999, 3538, 3610, 3628
Lsp1109I	GCAGC	6 cut(s)	352, 931, 1766, 2186, 2836, 2879
MaeII	ACGT	9 cut(s)	2307, 2393, 2465, 2793, 2955, 3186, 3204, 3387, 3438
MalI	GATC	9 cut(s)	6, 858, 1184, 1202, 1605, 2166, 2551, 2748, 3122
MboI	GATC	9 cut(s)	4, 856, 1182, 1200, 1603, 2164, 2549, 2746, 3120
MfeI	CAATTG	1 cut(s)	1186
MflI	RGATCY	3 cut(s)	4, 1603, 2164
MlsI	TGGCCA	2 cut(s)	864, 1164
MluNI	TGGCCA	2 cut(s)	864, 1164
MlyI	GAGTC	7 cut(s)	202, 1137, 1811, 1996, 2117, 2733, 3071
MmeI	TCCRAC	2 cut(s)	2782, 3294
Mox20I	TGGCCA	2 cut(s)	864, 1164
Mph1103I	ATGCAT	4 cut(s)	1915, 2989, 3223, 3310
MroXI	GAANNNNTTC	4 cut(s)	150, 1084, 1255, 2252
MscI	TGGCCA	2 cut(s)	864, 1164
MseI	TTAA	7 cut(s)	18, 2262, 2790, 3006, 3507, 3695, 3710
MslI	CAYNNNNRTG	3 cut(s)	573, 1214, 1809
Msp20I	TGGCCA	2 cut(s)	864, 1164
MspA1I	CMGCKG	4 cut(s)	226, 1077, 2849, 3104
MspR9I	CCNGG	8 cut(s)	1247, 1429, 1581, 2125, 2503, 2937, 2998, 3471
MunI	CAATTG	1 cut(s)	1186
Mva1269I	GAATGC	2 cut(s)	1617, 2670
MvaI	CCWGG	6 cut(s)	1247, 1429, 1581, 2503, 2937, 2998
MvnI	CGCG	2 cut(s)	2151, 3104
NciI	CCSGG	2 cut(s)	2125, 3471
NcoI	CCATGG	1 cut(s)	3288
NdeI	CATATG	1 cut(s)	1708
NdeII	GATC	9 cut(s)	4, 856, 1182, 1200, 1603, 2164, 2549, 2746, 3120
NheI	GCTAGC	1 cut(s)	1264
NmeAIII	GCCGAG	1 cut(s)	3056
NmuCI	GTSAC	7 cut(s)	98, 974, 1216, 2617, 3247, 3388, 3447
NsbI	TGCGCA	1 cut(s)	3408
NsiI	ATGCAT	4 cut(s)	1915, 2989, 3223, 3310
NspI	RCATGY	5 cut(s)	314, 737, 766, 1299, 2710
NspV	TTCGAA	1 cut(s)	2409
PaeI	GCATGC	1 cut(s)	314
PaeR7I	CTCGAG	2 cut(s)	2339, 2765
PagI	TCATGA	2 cut(s)	1197, 1458
PasI	CCCWGGG	1 cut(s)	2502
PciI	ACATGT	2 cut(s)	762, 2706
PciSI	GCTCTTC	1 cut(s)	2148
PcsI	WCGNNNNNNNCGW	1 cut(s)	2763
PctI	GAATGC	2 cut(s)	1617, 2670
PdmI	GAANNNNTTC	4 cut(s)	150, 1084, 1255, 2252
PfeI	GAWTC	9 cut(s)	44, 645, 651, 981, 1566, 2253, 2564, 2719, 2843
PflFI	GACNNNGTC	1 cut(s)	2417
PinAI	ACCGGT	1 cut(s)	2071
Ple19I	CGATCG	1 cut(s)	3123
PleI	GAGTC	7 cut(s)	202, 1136, 1811, 1996, 2116, 2733, 3070
PpsI	GAGTC	7 cut(s)	202, 1136, 1811, 1996, 2116, 2733, 3070
PpuMI	RGGWCCY	2 cut(s)	1576, 2320
PscI	ACATGT	2 cut(s)	762, 2706
PsiI	TTATAA	2 cut(s)	369, 2274
Psp124BI	GAGCTC	1 cut(s)	2996
Psp1406I	AACGTT	1 cut(s)	2465
Psp5II	RGGWCCY	2 cut(s)	1576, 2320
Psp6I	CCWGG	6 cut(s)	1245, 1427, 1579, 2501, 2935, 2996
PspEI	GGTNACC	2 cut(s)	98, 1288
PspFI	CCCAGC	3 cut(s)	2186, 2852, 2962
PspGI	CCWGG	6 cut(s)	1245, 1427, 1579, 2501, 2935, 2996
PspPI	GGNCC	9 cut(s)	355, 1553, 1576, 1748, 1764, 2320, 2581, 2770, 3366
PspPPI	RGGWCCY	2 cut(s)	1576, 2320
PspXI	VCTCGAGB	1 cut(s)	2765
PsrI	GAACNNNNNNTAC	2 cut(s)	2790, 2822
PstI	CTGCAG	1 cut(s)	1756
PsuI	RGATCY	3 cut(s)	4, 1603, 2164
PsyI	GACNNNGTC	1 cut(s)	2417
PvuI	CGATCG	1 cut(s)	3123
RseI	CAYNNNNRTG	3 cut(s)	573, 1214, 1809
SacI	GAGCTC	1 cut(s)	2996
SacII	CCGCGG	1 cut(s)	3105
SapI	GCTCTTC	1 cut(s)	2148
SaqAI	TTAA	7 cut(s)	18, 2262, 2790, 3006, 3507, 3695, 3710
Sau3AI	GATC	9 cut(s)	4, 856, 1182, 1200, 1603, 2164, 2549, 2746, 3120
Sau96I	GGNCC	9 cut(s)	355, 1553, 1576, 1748, 1764, 2320, 2581, 2770, 3366
SchI	GAGTC	7 cut(s)	202, 1137, 1811, 1996, 2117, 2733, 3071
ScrFI	CCNGG	8 cut(s)	1247, 1429, 1581, 2125, 2503, 2937, 2998, 3471
SfcI	CTRYAG	4 cut(s)	1752, 1768, 2037, 3243
Sfr274I	CTCGAG	2 cut(s)	2339, 2765
Sfr303I	CCGCGG	1 cut(s)	3105
SfuI	TTCGAA	1 cut(s)	2409
SgrBI	CCGCGG	1 cut(s)	3105
SinI	GGWCC	5 cut(s)	1553, 1576, 1748, 1764, 2320
SlaI	CTCGAG	2 cut(s)	2339, 2765
SmiMI	CAYNNNNRTG	3 cut(s)	573, 1214, 1809
SmlI	CTYRAG	6 cut(s)	8, 422, 775, 2159, 2339, 2765
SmoI	CTYRAG	6 cut(s)	8, 422, 775, 2159, 2339, 2765
SpeI	ACTAGT	1 cut(s)	1834
SphI	GCATGC	1 cut(s)	314
SspI	AATATT	2 cut(s)	58, 819
SstI	GAGCTC	1 cut(s)	2996
StyD4I	CCNGG	8 cut(s)	1245, 1427, 1579, 2123, 2501, 2935, 2996, 3469
StyI	CCWWGG	5 cut(s)	82, 558, 1308, 3288, 3461
TaaI	ACNGT	5 cut(s)	291, 1279, 1796, 1963, 3153
TaiI	ACGT	9 cut(s)	2310, 2396, 2468, 2796, 2958, 3189, 3207, 3390, 3441
TaqII	GACCGA	2 cut(s)	1752, 2717
TatI	WGTACW	4 cut(s)	187, 418, 1030, 2709
TauI	GCSGC	5 cut(s)	1339, 1717, 2893, 3083, 3469
TfiI	GAWTC	9 cut(s)	44, 645, 651, 981, 1566, 2253, 2564, 2719, 2843
Tru1I	TTAA	7 cut(s)	18, 2262, 2790, 3006, 3507, 3695, 3710
Tru9I	TTAA	7 cut(s)	18, 2262, 2790, 3006, 3507, 3695, 3710
TseFI	GTSAC	7 cut(s)	98, 974, 1216, 2617, 3247, 3388, 3447
TseI	GCWGC	6 cut(s)	340, 944, 1754, 2174, 2849, 2867
Tsp45I	GTSAC	7 cut(s)	98, 974, 1216, 2617, 3247, 3388, 3447
TspGWI	ACGGA	2 cut(s)	3469, 3653
Tth111I	GACNNNGTC	1 cut(s)	2417
VneI	GTGCAC	3 cut(s)	1977, 3147, 3654
VpaK11BI	GGWCC	5 cut(s)	1553, 1576, 1748, 1764, 2320
XceI	RCATGY	5 cut(s)	314, 737, 766, 1299, 2710
XhoI	CTCGAG	2 cut(s)	2339, 2765
XmiI	GTMKAC	1 cut(s)	1922
XmnI	GAANNNNTTC	4 cut(s)	150, 1084, 1255, 2252
Zsp2I	ATGCAT	4 cut(s)	1915, 2989, 3223, 3310

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.