MD01G1180200.v1.1

ceramide glucosyltransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0019769
Physical Location & Seq
Forward (+)
27969755 .. 27970963
1209 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1180200.v1.1.491

Sequence Viewer

Length: 306 bp
ATGCGGCTTGCAGAGAGGAGGGAGGGAGGGACGAGAAGACGAAAAACAACTGCAGCAAGTTCATGGACAGGGAGAGAGAAAGCGTTCTGCAGCCCGCTAGCAGTTTTCGTTCAGATCCAGGTCACTTCTCTCTATGGTGGTCCCTTAGAGTTTATGTTTATTGTGCAAAGCACAGAAGACCCTGCTTATCGAGCTGTATCTATGCTACTATCAGAGCTTAAGGACGAGGTTGATGCTAAGATTGTTGTGGCTGGTATTTCAACAACCTGTAGTCAGAAAATTCACAACCAATTGGTATGTACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_21

Protein Analysis

102

Amino Acids

11.18

Weight (kDa)

8.96

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019769)

Species Orthologous Gene IDs
malus_domestica MD01G1180200.v1.1
pyrus_communis pycom01g18950 pycom01g18970 pycom01g18980 pycom01g19000 pycom01g19020 pycom09g10610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 4, 95
AclWI GGATC 1 cut(s) 109
AcsI RAATTY 1 cut(s) 279
AfaI GTAC 1 cut(s) 301
AflII CTTAAG 1 cut(s) 218
AgsI TTSAA 1 cut(s) 261
AjnI CCWGG 1 cut(s) 117
AluBI AGCT 2 cut(s) 194, 217
AluI AGCT 2 cut(s) 194, 217
AlwI GGATC 1 cut(s) 109
ApeKI GCWGC 2 cut(s) 53, 90
ApoI RAATTY 1 cut(s) 279
Asp700I GAANNNNTTC 1 cut(s) 83
AspS9I GGNCC 1 cut(s) 140
AsuNHI GCTAGC 1 cut(s) 97
AvaII GGWCC 1 cut(s) 140
BbsI GAAGAC 2 cut(s) 43, 183
BbvI GCAGC 2 cut(s) 65, 102
BcgI CGANNNNNNTGC 2 cut(s) 215, 249
BciT130I CCWGG 1 cut(s) 119
BfaI CTAG 1 cut(s) 98
BfmI CTRYAG 3 cut(s) 51, 88, 268
BfrI CTTAAG 1 cut(s) 218
BisI GCNGC 3 cut(s) 5, 54, 91
BlsI GCNGC 3 cut(s) 6, 55, 92
Bme1390I CCNGG 1 cut(s) 119
Bme18I GGWCC 1 cut(s) 140
BmgT120I GGNCC 1 cut(s) 140
BmiI GGNNCC 1 cut(s) 142
BmrFI CCNGG 1 cut(s) 119
BmsI GCATC 1 cut(s) 223
BmtI GCTAGC 1 cut(s) 101
BpiI GAAGAC 2 cut(s) 43, 183
BseBI CCWGG 1 cut(s) 119
BseRI GAGGAG 1 cut(s) 31
BseXI GCAGC 2 cut(s) 65, 102
BslFI GGGAC 2 cut(s) 43, 126
BsmFI GGGAC 2 cut(s) 43, 126
Bsp143I GATC 1 cut(s) 114
BspACI CCGC 2 cut(s) 4, 95
BspLI GGNNCC 1 cut(s) 142
BspMAI CTGCAG 2 cut(s) 55, 92
BspOI GCTAGC 1 cut(s) 101
BspPI GGATC 1 cut(s) 109
BspTI CTTAAG 1 cut(s) 218
BssMI GATC 1 cut(s) 114
Bst2UI CCWGG 1 cut(s) 119
BstAFI CTTAAG 1 cut(s) 218
BstC8I GCNNGC 3 cut(s) 9, 95, 99
BstDEI CTNAG 2 cut(s) 145, 237
BstKTI GATC 1 cut(s) 117
BstMBI GATC 1 cut(s) 114
BstMWI GCNNNNNNNGC 1 cut(s) 191
BstNI CCWGG 1 cut(s) 119
BstSCI CCNGG 1 cut(s) 117
BstSFI CTRYAG 3 cut(s) 51, 88, 268
BstV1I GCAGC 2 cut(s) 65, 102
BstV2I GAAGAC 2 cut(s) 43, 183
BstX2I RGATCY 1 cut(s) 114
BstYI RGATCY 1 cut(s) 114
Cac8I GCNNGC 3 cut(s) 9, 95, 99
Cfr13I GGNCC 1 cut(s) 140
Csp6I GTAC 1 cut(s) 300
CviAII CATG 1 cut(s) 63
CviJI RGCY 5 cut(s) 7, 93, 194, 217, 251
CviKI_1 RGCY 5 cut(s) 7, 93, 194, 217, 251
CviQI GTAC 1 cut(s) 300
DdeI CTNAG 2 cut(s) 145, 237
DpnI GATC 1 cut(s) 116
DpnII GATC 1 cut(s) 114
Eco47I GGWCC 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 117
FaeI CATG 1 cut(s) 66
FaiI YATR 5 cut(s) 64, 135, 155, 203, 298
FaqI GGGAC 2 cut(s) 43, 126
FatI CATG 1 cut(s) 62
FauI CCCGC 1 cut(s) 102
Fnu4HI GCNGC 3 cut(s) 5, 54, 91
Fsp4HI GCNGC 3 cut(s) 5, 54, 91
FspBI CTAG 1 cut(s) 98
GluI GCNGC 3 cut(s) 5, 54, 91
Hin1II CATG 1 cut(s) 66
Hpy188I TCNGA 3 cut(s) 114, 214, 276
HpyCH4V TGCA 4 cut(s) 11, 53, 90, 166
HpyF10VI GCNNNNNNNGC 1 cut(s) 191
HpyF3I CTNAG 2 cut(s) 145, 237
Hsp92II CATG 1 cut(s) 66
Kzo9I GATC 1 cut(s) 114
LpnPI CCDG 6 cut(s) 54, 104, 131, 195, 237, 280
Lsp1109I GCAGC 2 cut(s) 65, 102
LweI GCATC 1 cut(s) 223
MaeI CTAG 1 cut(s) 98
MaeIII GTNAC 1 cut(s) 121
MalI GATC 1 cut(s) 116
MboI GATC 1 cut(s) 114
MboII GAAGA 2 cut(s) 48, 188
MfeI CAATTG 1 cut(s) 290
MflI RGATCY 1 cut(s) 114
MluCI AATT 2 cut(s) 279, 290
MnlI CCTC 5 cut(s) 9, 12, 16, 20, 220
MroXI GAANNNNTTC 1 cut(s) 83
MseI TTAA 1 cut(s) 219
MspCI CTTAAG 1 cut(s) 218
MspR9I CCNGG 1 cut(s) 119
MunI CAATTG 1 cut(s) 290
MvaI CCWGG 1 cut(s) 119
MwoI GCNNNNNNNGC 1 cut(s) 191
NdeII GATC 1 cut(s) 114
NheI GCTAGC 1 cut(s) 97
NlaIII CATG 1 cut(s) 66
NlaIV GGNNCC 1 cut(s) 142
NmuCI GTSAC 1 cut(s) 121
PdmI GAANNNNTTC 1 cut(s) 83
PkrI GCNGC 3 cut(s) 6, 55, 92
Psp6I CCWGG 1 cut(s) 117
PspGI CCWGG 1 cut(s) 117
PspN4I GGNNCC 1 cut(s) 142
PspPI GGNCC 1 cut(s) 140
PstI CTGCAG 2 cut(s) 55, 92
PsuI RGATCY 1 cut(s) 114
RsaI GTAC 1 cut(s) 301
RsaNI GTAC 1 cut(s) 300
SaqAI TTAA 1 cut(s) 219
SatI GCNGC 3 cut(s) 5, 54, 91
Sau3AI GATC 1 cut(s) 114
Sau96I GGNCC 1 cut(s) 140
ScrFI CCNGG 1 cut(s) 119
SetI ASST 6 cut(s) 123, 196, 219, 231, 269, 305
SfaNI GCATC 1 cut(s) 223
SfcI CTRYAG 3 cut(s) 51, 88, 268
SinI GGWCC 1 cut(s) 140
SmlI CTYRAG 1 cut(s) 218
SmoI CTYRAG 1 cut(s) 218
Sse9I AATT 2 cut(s) 279, 290
SsiI CCGC 2 cut(s) 4, 95
SspMI CTAG 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 117
TaqI TCGA 1 cut(s) 190
TasI AATT 2 cut(s) 279, 290
TauI GCSGC 1 cut(s) 7
Tru1I TTAA 1 cut(s) 219
Tru9I TTAA 1 cut(s) 219
TseFI GTSAC 1 cut(s) 121
TseI GCWGC 2 cut(s) 53, 90
Tsp45I GTSAC 1 cut(s) 121
TspDTI ATGAA 1 cut(s) 51
Vha464I CTTAAG 1 cut(s) 218
VpaK11BI GGWCC 1 cut(s) 140
XapI RAATTY 1 cut(s) 279
XmnI GAANNNNTTC 1 cut(s) 83
XspI CTAG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.