pycom01g19000

ceramide glucosyltransferase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
17792365 .. 17794104
1740 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g19000.3

Sequence Viewer

Length: 378 bp
ATGTCTTATCTGGTCACTTCTCTCTATGGTGGTCCCTTAGAGTTTACGTTTATCGTGCAAAGCACAGAAGACCCTGCTTATCGGGCTGTATCTATGCTACTATCAGAGCTTAAGGACGAGGTTGATGTTAAGATTGTTGTGGCTGGTATTTCAACAACCTGCAGTCAGAAAATTCACAACCAATTGCAAAAAACCTTGCGGCGAGCAAACTGGCACAACCAATTCTGCCAGAATTGCTGGAGAATTCCACAACCAAGGTCATTGAGTACGGCCAGAAGCATGTTGAGGGTCGAGACGGCGATAGCACCGATGTTGGCAAGAGCGGCGACCCCTTTTCAAGATTGTTGGGTCCAAAAGAAGAAGAAGAAGAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

126

Amino Acids

14.3

Weight (kDa)

9.61

Isoelectric Point (pI)

48.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019769)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 167
AccBSI CCGCTC 1 cut(s) 323
AciI CCGC 2 cut(s) 199, 323
AcoI YGGCCR 1 cut(s) 270
AcsI RAATTY 2 cut(s) 171, 243
AfaI GTAC 1 cut(s) 268
AflII CTTAAG 1 cut(s) 110
AgsI TTSAA 2 cut(s) 153, 338
AluBI AGCT 1 cut(s) 109
AluI AGCT 1 cut(s) 109
Alw26I GTCTC 1 cut(s) 287
AoxI GGCC 1 cut(s) 270
ApoI RAATTY 2 cut(s) 171, 243
AspS9I GGNCC 2 cut(s) 32, 349
AvaII GGWCC 2 cut(s) 32, 349
BbsI GAAGAC 1 cut(s) 75
BceAI ACGGC 2 cut(s) 285, 312
BcoDI GTCTC 1 cut(s) 287
BfmI CTRYAG 1 cut(s) 160
BfrI CTTAAG 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 167
BisI GCNGC 2 cut(s) 200, 324
BlsI GCNGC 2 cut(s) 201, 325
Bme18I GGWCC 2 cut(s) 32, 349
BmgT120I GGNCC 2 cut(s) 32, 349
BmiI GGNNCC 2 cut(s) 34, 350
BpiI GAAGAC 1 cut(s) 75
BpmI CTGGAG 1 cut(s) 259
BsaJI CCNNGG 1 cut(s) 254
Bse1I ACTGG 1 cut(s) 215
BseDI CCNNGG 1 cut(s) 254
BseNI ACTGG 1 cut(s) 215
BshFI GGCC 1 cut(s) 272
BslFI GGGAC 1 cut(s) 18
BsmAI GTCTC 1 cut(s) 287
BsmBI CGTCTC 1 cut(s) 287
BsmFI GGGAC 1 cut(s) 18
BsnI GGCC 1 cut(s) 272
BspACI CCGC 2 cut(s) 199, 323
BspANI GGCC 1 cut(s) 272
BspLI GGNNCC 2 cut(s) 34, 350
BspMAI CTGCAG 1 cut(s) 164
BspMI ACCTGC 1 cut(s) 167
BspTI CTTAAG 1 cut(s) 110
BsrBI CCGCTC 1 cut(s) 323
BsrI ACTGG 1 cut(s) 215
BssECI CCNNGG 1 cut(s) 254
BssT1I CCWWGG 1 cut(s) 254
BstAFI CTTAAG 1 cut(s) 110
BstC8I GCNNGC 1 cut(s) 204
BstDEI CTNAG 1 cut(s) 37
BstMAI GTCTC 1 cut(s) 287
BstMWI GCNNNNNNNGC 3 cut(s) 83, 234, 323
BstNSI RCATGY 1 cut(s) 283
BstSFI CTRYAG 1 cut(s) 160
BstV2I GAAGAC 1 cut(s) 75
BsuRI GGCC 1 cut(s) 272
BveI ACCTGC 1 cut(s) 167
Cac8I GCNNGC 1 cut(s) 204
Cfr13I GGNCC 2 cut(s) 32, 349
Csp6I GTAC 1 cut(s) 267
CviAII CATG 1 cut(s) 280
CviJI RGCY 4 cut(s) 86, 109, 143, 272
CviKI_1 RGCY 4 cut(s) 86, 109, 143, 272
CviQI GTAC 1 cut(s) 267
DdeI CTNAG 1 cut(s) 37
EaeI YGGCCR 1 cut(s) 270
Eco130I CCWWGG 1 cut(s) 254
Eco47I GGWCC 2 cut(s) 32, 349
EcoRI GAATTC 1 cut(s) 243
EcoT14I CCWWGG 1 cut(s) 254
ErhI CCWWGG 1 cut(s) 254
Esp3I CGTCTC 1 cut(s) 287
FaeI CATG 1 cut(s) 283
FaiI YATR 3 cut(s) 27, 95, 281
FaqI GGGAC 1 cut(s) 18
FatI CATG 1 cut(s) 279
Fnu4HI GCNGC 2 cut(s) 200, 324
Fsp4HI GCNGC 2 cut(s) 200, 324
GluI GCNGC 2 cut(s) 200, 324
GsuI CTGGAG 1 cut(s) 259
HaeIII GGCC 1 cut(s) 272
Hin1II CATG 1 cut(s) 283
Hpy166II GTNNAC 1 cut(s) 45
Hpy188I TCNGA 2 cut(s) 106, 168
Hpy188III TCNNGA 2 cut(s) 292, 338
Hpy8I GTNNAC 1 cut(s) 45
HpyAV CCTTC 1 cut(s) 364
HpyCH4IV ACGT 1 cut(s) 47
HpyCH4V TGCA 3 cut(s) 58, 162, 187
HpyF10VI GCNNNNNNNGC 3 cut(s) 83, 234, 323
HpyF3I CTNAG 1 cut(s) 37
HpySE526I ACGT 1 cut(s) 47
Hsp92II CATG 1 cut(s) 283
LpnPI CCDG 7 cut(s) 87, 129, 172, 196, 223, 242, 286
MaeII ACGT 1 cut(s) 47
MaeIII GTNAC 1 cut(s) 13
MbiI CCGCTC 1 cut(s) 323
MboII GAAGA 4 cut(s) 80, 370, 373, 376
MfeI CAATTG 1 cut(s) 182
MluCI AATT 5 cut(s) 171, 182, 221, 232, 243
MnlI CCTC 2 cut(s) 112, 279
MseI TTAA 2 cut(s) 111, 129
MspCI CTTAAG 1 cut(s) 110
MunI CAATTG 1 cut(s) 182
MwoI GCNNNNNNNGC 3 cut(s) 83, 234, 323
NlaIII CATG 1 cut(s) 283
NlaIV GGNNCC 2 cut(s) 34, 350
NmuCI GTSAC 1 cut(s) 13
NspI RCATGY 1 cut(s) 283
PkrI GCNGC 2 cut(s) 201, 325
PspN4I GGNNCC 2 cut(s) 34, 350
PspPI GGNCC 2 cut(s) 32, 349
PstI CTGCAG 1 cut(s) 164
RsaI GTAC 1 cut(s) 268
RsaNI GTAC 1 cut(s) 267
SaqAI TTAA 2 cut(s) 111, 129
SatI GCNGC 2 cut(s) 200, 324
Sau96I GGNCC 2 cut(s) 32, 349
SetI ASST 6 cut(s) 50, 111, 123, 161, 197, 260
SfcI CTRYAG 1 cut(s) 160
SinI GGWCC 2 cut(s) 32, 349
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
Sse9I AATT 5 cut(s) 171, 182, 221, 232, 243
SsiI CCGC 2 cut(s) 199, 323
StyI CCWWGG 1 cut(s) 254
TaiI ACGT 1 cut(s) 50
TaqI TCGA 1 cut(s) 291
TasI AATT 5 cut(s) 171, 182, 221, 232, 243
TauI GCSGC 2 cut(s) 202, 326
Tru1I TTAA 2 cut(s) 111, 129
Tru9I TTAA 2 cut(s) 111, 129
TseFI GTSAC 1 cut(s) 13
Tsp45I GTSAC 1 cut(s) 13
Vha464I CTTAAG 1 cut(s) 110
VpaK11BI GGWCC 2 cut(s) 32, 349
XapI RAATTY 2 cut(s) 171, 243
XceI RCATGY 1 cut(s) 283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.