Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0015307

Physical Location & Seq

Genomic Coordinates Forward (+)

29294109 .. 29298341

Gene Structure 4233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1194200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGAATTTTACGAAATGGGTTCTCTTAGATATGATCAATAAATGCAGTGGCTTCCGGAGTTTCAAGCAAATCCATGCACAGATTTTAGCTTCTGGGCTAGCTTCCAATGACTTGGTTGCAAGCAGCGTGGTTGGATTTCTCGGAAAATCAGTTACTTCTGTTGATTACGCTTGTGATTTTTTGAAACAAATTGATTGGCGCGAGAGCTCGTTTCCGTTCAACTTGTTGATCTCCGGCTGTGCGAGCGGAGACGCGCCGCGGGCGGCCTTTTTGGCATTTAGAAGGATAGTGAGAGATGGGTTTTCACCGGATATGTTTACCGTCCCGGCGGTTATGAAATCTTGTGTGAAGTTTTCGGGGAAGGGAGAGGGCAGGCAGGTTCATGGGGTGGTTGTGAAGATGGGTTTTCAATGTGATGTTTATGTGCAGAACTCGCTGGTACATTTCTATAGCGTTTGTGGGGATTGTGGGAGTGCGGTCAAGGTGTTTGATGAGATGCCTGAGAGAGATGTGGTGTCTTGGACTGGCTTGATATCCGGGCATGTGAAGTCGGGATTGTTTGATGAGGCTATGTCTTTGTTTTCGAGGATGGATGTGAAGCCGAATGTGGCAACATTTGTTAGTGTGCTTGTGGCTTGCGGGCGGATGGGGTATTTGAGTGTGGGGAAGGTGATTCATGGATTGATCTTTAAGCGTTCGTTGGGGACAGATTTGGTGGTAGGCAATGCTGTCTTGGATATGTATGTTAAGTGTGAGAGTTTATGCGATGCAAAGAAATTTTTTGATGAGCTTCCTGAAAGGGATATTGTATCTTGGACGAGCATGATAAGTGGATTGGTGCAGTGTAAACGTGCAAGAGAGTCATTAGAGTTGTTCCACGATATGCAAAGTTTAGGCATCGAGCCTGATAAAATTATACTTGCTAGTGTGCTTTCGGCTTGTGCCAGTCTTGGGGCTCTTGATTGTGGAAGATGGGTGCATGAGTATATTGATCGTAAGGGTATCCAGTGGGATGTCCATATTGGAACATCTCTGATAGACATGTATGCGAAGTCTGGCTGTATACAGATGGCATTGCAGACTTTTGACGAATTGCATTGTGGGAATGTCTCTACATGGAACGCATTGTTAGGTGGTTTAGCAATGCACGGACATGGGCACGAAGCGCTGAAAATTTTTGAAGAAATGACTCGGTCTGGACCTAGACCAAATGCAGTGACATTTCTAGCCATTTTGACTGCCTGCTGCCATGCTGGTTTGGTTGATGCAGGCCGTCGGTACTTTTATCAGATGATAAGCCAACCTTACAATCTTTCCCCAAAGTTAGAACACTATGGATGCATGGTTGATCTGCTCTGTAGGGCTGGACTCCTGGGTGAAGCTCGGGAGTTGATAAACACAATGCCCATGCAACCCGATGTGCTGATATGGGGAGCTCTCCTGAGTGCTTGCAAGGCCGTAGGTGACGTTGAGCTCTCCCAAGAAATATTAGACGCTCTCCTGAAACTTAAGTCGCAAGATAGCGGGGCTTACGTGCTTCTATCAAACATATATGCAACAAATAGAAGATGGGGGGATGTAATAAGGGTAAGGAAGTTGATGAAGAGGAAAGGAATACAGAAGTCCCCCGGATCGAGTGTTATACAGGTCGATGGTAAGGCTTATGAATTTGTAGTTGGAGGTACCAGCCACCCTCGAAAGGACGATATCCATATACTATTGAATATCCTTGCTAAACAAGTCTATCTTGAAGGGAACTGTGCAACAAATGCCCACAGCCTGTATACGTCTTCAAAGTTGGCCAAGAATCCGAGTGCAGCTGTAACCACGGTAATTCCTAGATCAGGTTTCGCCTTGGACTTGTTAGCATCCATTCCCTTCGCTCCGCTTTCTCTTTTCTCTAGGATTCTCCCTTTCTCTTCAGCATACTTATCCGAGAACCAGATGTGGTGTAAGAATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

655

Amino Acids

71.81

Weight (kDa)

8.24

Isoelectric Point (pI)

40.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	169 - 213	1.5e-07	PPR repeat family
PPR	PF01535	172 - 198	1.1e-06	PPR repeat
PPR_2	PF13041	267 - 305	4.6e-08	PPR repeat family
PPR	PF01535	270 - 300	5.5e-07	PPR repeat
PPR_2	PF13041	369 - 417	5e-13	PPR repeat family
PPR_3	PF13812	369 - 415	1.5e-06	Pentatricopeptide repeat domain
PPR	PF01535	371 - 400	7e-07	PPR repeat
E_motif	PF20431	489 - 549	6.4e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38010
fragaria_vesca	FvH4_7g28780
malus_domestica	MD01G1194200.v1.1
prunus_persica	Prupe.2G288100_v2.0.a1
pyrus_communis	pycom01g20450 pycom07g24000
rosa_chinensis	RchiOBHm_Chr1g0376341
rosa_laevigata	RLG00000026610
rosa_multiflora	Rmu_sc0005594.1_g000021 Rmu_sc0016074.1_g000004 Rmu_sc0028960.1_g000001
rosa_roxburghii	Rroxscaffold_4G00282190
rosa_rugosa	Rorug01G0395700
rosa_samantha	Rh1BG370800 Rh1CG383600
rosa_wichuraiana	Rw1G036110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	367
Acc65I	GGTACC	1 cut(s)	1682
AccB1I	GGYRCC	1 cut(s)	1682
AccBSI	CCGCTC	1 cut(s)	246
AccI	GTMKAC	2 cut(s)	1063, 1784
AccII	CGCG	3 cut(s)	201, 254, 259
AccIII	TCCGGA	1 cut(s)	54
AclWI	GGATC	1 cut(s)	1639
AcoI	YGGCCR	1 cut(s)	1800
AcsI	RAATTY	4 cut(s)	4, 776, 1173, 1667
AcuI	CTGAAG	1 cut(s)	1905
AfaI	GTAC	3 cut(s)	441, 1280, 1684
AfeI	AGCGCT	1 cut(s)	1167
AfiI	CCNNNNNNNGG	3 cut(s)	951, 1699, 1844
AflII	CTTAAG	1 cut(s)	1508
AflIII	ACRYGT	1 cut(s)	1041
AgsI	TTSAA	8 cut(s)	64, 184, 220, 410, 1181, 1723, 1751, 1794
AjnI	CCWGG	1 cut(s)	1371
AjuI	GAANNNNNNNTTGG	2 cut(s)	1659, 1691
AluBI	AGCT	8 cut(s)	89, 101, 207, 790, 1382, 1436, 1474, 1820
AluI	AGCT	8 cut(s)	89, 101, 207, 790, 1382, 1436, 1474, 1820
Alw21I	GWGCWC	3 cut(s)	209, 1438, 1476
Alw26I	GTCTC	2 cut(s)	243, 1114
AlwI	GGATC	1 cut(s)	1639
Ama87I	CYCGRG	1 cut(s)	1383
Aor13HI	TCCGGA	1 cut(s)	54
Aor51HI	AGCGCT	1 cut(s)	1167
AoxI	GGCC	4 cut(s)	264, 1270, 1455, 1800
ApeKI	GCWGC	3 cut(s)	123, 1245, 1817
ApoI	RAATTY	4 cut(s)	4, 776, 1173, 1667
Asp718I	GGTACC	1 cut(s)	1682
AspLEI	GCGC	3 cut(s)	201, 256, 1168
AspS9I	GGNCC	1 cut(s)	1199
AsuC2I	CCSGG	3 cut(s)	326, 538, 1629
AsuHPI	GGTGA	4 cut(s)	297, 682, 1388, 1475
AsuNHI	GCTAGC	1 cut(s)	97
AvaI	CYCGRG	1 cut(s)	1383
AvaII	GGWCC	1 cut(s)	1199
BaeGI	GKGCMC	1 cut(s)	1161
BalI	TGGCCA	1 cut(s)	1802
BanI	GGYRCC	1 cut(s)	1682
BanII	GRGCYC	4 cut(s)	209, 958, 1438, 1476
BbsI	GAAGAC	1 cut(s)	1782
Bbv12I	GWGCWC	3 cut(s)	209, 1438, 1476
BbvI	GCAGC	3 cut(s)	135, 1232, 1829
BccI	CCATC	8 cut(s)	290, 394, 583, 640, 966, 1063, 1563, 1646
BceAI	ACGGC	2 cut(s)	1257, 1442
BciT130I	CCWGG	1 cut(s)	1373
BciVI	GTATCC	1 cut(s)	1013
BclI	TGATCA	1 cut(s)	33
BcnI	CCSGG	3 cut(s)	326, 538, 1629
BcoDI	GTCTC	2 cut(s)	243, 1114
BfaI	CTAG	6 cut(s)	98, 924, 1203, 1226, 1839, 1902
BfmI	CTRYAG	2 cut(s)	448, 1357
BfoI	RGCGCY	1 cut(s)	1169
BfrI	CTTAAG	1 cut(s)	1508
BfuAI	ACCTGC	1 cut(s)	367
BfuI	GTATCC	1 cut(s)	1013
BglI	GCCNNNNNGGC	1 cut(s)	272
BisI	GCNGC	5 cut(s)	124, 257, 264, 1246, 1818
BlsI	GCNGC	5 cut(s)	125, 258, 265, 1247, 1819
Bme1390I	CCNGG	4 cut(s)	326, 538, 1373, 1629
Bme18I	GGWCC	1 cut(s)	1199
BmeT110I	CYCGRG	1 cut(s)	1383
BmgT120I	GGNCC	1 cut(s)	1199
BmiI	GGNNCC	1 cut(s)	1684
BmrFI	CCNGG	4 cut(s)	326, 538, 1373, 1629
BmsI	GCATC	6 cut(s)	486, 757, 906, 1255, 1328, 1877
BmtI	GCTAGC	1 cut(s)	101
BpiI	GAAGAC	1 cut(s)	1782
BpuMI	CCSGG	3 cut(s)	326, 538, 1629
BsaAI	YACGTR	1 cut(s)	1534
BsaJI	CCNNGG	5 cut(s)	257, 1372, 1627, 1827, 1854
BsaWI	WCCGGW	2 cut(s)	54, 307
Bsc4I	CCNNNNNNNGG	3 cut(s)	951, 1699, 1844
Bse1I	ACTGG	3 cut(s)	529, 945, 1006
Bse3DI	GCAATG	3 cut(s)	730, 1073, 1149
BseAI	TCCGGA	1 cut(s)	54
BseBI	CCWGG	1 cut(s)	1373
BseDI	CCNNGG	5 cut(s)	257, 1372, 1627, 1827, 1854
BseGI	GGATG	7 cut(s)	594, 598, 651, 1018, 1343, 1582, 1868
BseLI	CCNNNNNNNGG	3 cut(s)	951, 1699, 1844
BseMI	GCAATG	3 cut(s)	730, 1073, 1149
BseMII	CTCAG	2 cut(s)	492, 1433
BseNI	ACTGG	3 cut(s)	529, 945, 1006
BseSI	GKGCMC	1 cut(s)	1161
BseXI	GCAGC	3 cut(s)	135, 1232, 1829
BsgI	GTGCAG	3 cut(s)	446, 860, 1836
Bsh1236I	CGCG	3 cut(s)	201, 254, 259
BshFI	GGCC	4 cut(s)	266, 1272, 1457, 1802
BshNI	GGYRCC	1 cut(s)	1682
BsiHKAI	GWGCWC	3 cut(s)	209, 1438, 1476
BsiHKCI	CYCGRG	1 cut(s)	1383
BsiSI	CCGG	6 cut(s)	55, 234, 308, 326, 537, 1629
BslFI	GGGAC	3 cut(s)	308, 718, 1609
BslI	CCNNNNNNNGG	3 cut(s)	951, 1699, 1844
BsmAI	GTCTC	2 cut(s)	243, 1114
BsmBI	CGTCTC	1 cut(s)	243
BsmFI	GGGAC	3 cut(s)	308, 718, 1609
BsnI	GGCC	4 cut(s)	266, 1272, 1457, 1802
BsoBI	CYCGRG	1 cut(s)	1383
Bsp1286I	GDGCHC	5 cut(s)	209, 958, 1161, 1438, 1476
Bsp13I	TCCGGA	1 cut(s)	54
Bsp143I	GATC	7 cut(s)	33, 228, 684, 991, 1348, 1631, 1841
BspANI	GGCC	4 cut(s)	266, 1272, 1457, 1802
BspCNI	CTCAG	2 cut(s)	493, 1434
BspEI	TCCGGA	1 cut(s)	54
BspFNI	CGCG	3 cut(s)	201, 254, 259
BspLI	GGNNCC	1 cut(s)	1684
BspMI	ACCTGC	1 cut(s)	367
BspOI	GCTAGC	1 cut(s)	101
BspPI	GGATC	1 cut(s)	1639
BspT107I	GGYRCC	1 cut(s)	1682
BspTI	CTTAAG	1 cut(s)	1508
BsrBI	CCGCTC	1 cut(s)	246
BsrDI	GCAATG	3 cut(s)	730, 1073, 1149
BsrI	ACTGG	3 cut(s)	529, 945, 1006
BssECI	CCNNGG	5 cut(s)	257, 1372, 1627, 1827, 1854
BssMI	GATC	7 cut(s)	33, 228, 684, 991, 1348, 1631, 1841
BssNAI	GTATAC	2 cut(s)	1064, 1785
BssT1I	CCWWGG	1 cut(s)	1854
Bst1107I	GTATAC	2 cut(s)	1064, 1785
Bst2UI	CCWGG	1 cut(s)	1373
Bst4CI	ACNGT	3 cut(s)	322, 1760, 1831
Bst6I	CTCTTC	2 cut(s)	1598, 1924
BstAFI	CTTAAG	1 cut(s)	1508
BstAPI	GCANNNNNTGC	1 cut(s)	1769
BstBAI	YACGTR	1 cut(s)	1534
BstDEI	CTNAG	3 cut(s)	25, 501, 1442
BstDSI	CCRYGG	2 cut(s)	257, 1827
BstENI	CCTNNNNNAGG	1 cut(s)	1842
BstF5I	GGATG	7 cut(s)	594, 598, 651, 1018, 1343, 1582, 1868
BstFNI	CGCG	3 cut(s)	201, 254, 259
BstH2I	RGCGCY	1 cut(s)	1169
BstHHI	GCGC	3 cut(s)	201, 256, 1168
BstKTI	GATC	7 cut(s)	36, 231, 687, 994, 1351, 1634, 1844
BstMAI	GTCTC	2 cut(s)	243, 1114
BstMBI	GATC	7 cut(s)	33, 228, 684, 991, 1348, 1631, 1841
BstMWI	GCNNNNNNNGC	7 cut(s)	243, 260, 272, 433, 1165, 1454, 1769
BstNI	CCWGG	1 cut(s)	1373
BstNSI	RCATGY	2 cut(s)	545, 1045
BstSCI	CCNGG	4 cut(s)	324, 536, 1371, 1627
BstSFI	CTRYAG	2 cut(s)	448, 1357
BstSLI	GKGCMC	1 cut(s)	1161
BstUI	CGCG	3 cut(s)	201, 254, 259
BstV1I	GCAGC	3 cut(s)	135, 1232, 1829
BstV2I	GAAGAC	1 cut(s)	1782
BstXI	CCANNNNNNTGG	1 cut(s)	112
BstZ17I	GTATAC	2 cut(s)	1064, 1785
BsuI	GTATCC	1 cut(s)	1013
BsuRI	GGCC	4 cut(s)	266, 1272, 1457, 1802
BtgI	CCRYGG	2 cut(s)	257, 1827
BtgZI	GCGATG	1 cut(s)	780
BtsCI	GGATG	7 cut(s)	594, 598, 651, 1018, 1343, 1582, 1868
BtsI	GCAGTG	3 cut(s)	52, 848, 1221
BtsIMutI	CAGTG	4 cut(s)	52, 848, 1013, 1221
BveI	ACCTGC	1 cut(s)	367
CfoI	GCGC	3 cut(s)	201, 256, 1168
Cfr13I	GGNCC	1 cut(s)	1199
Cfr42I	CCGCGG	1 cut(s)	260
CseI	GACGC	2 cut(s)	260, 1502
Csp6I	GTAC	3 cut(s)	440, 1279, 1683
CspCI	CAANNNNNGTGG	2 cut(s)	108, 143
CviQI	GTAC	3 cut(s)	440, 1279, 1683
DdeI	CTNAG	3 cut(s)	25, 501, 1442
DpnI	GATC	7 cut(s)	35, 230, 686, 993, 1350, 1633, 1843
DpnII	GATC	7 cut(s)	33, 228, 684, 991, 1348, 1631, 1841
EaeI	YGGCCR	1 cut(s)	1800
Eam1104I	CTCTTC	2 cut(s)	1598, 1924
EarI	CTCTTC	2 cut(s)	1598, 1924
EciI	GGCGGA	1 cut(s)	658
Ecl136II	GAGCTC	3 cut(s)	207, 1436, 1474
Eco130I	CCWWGG	1 cut(s)	1854
Eco24I	GRGCYC	4 cut(s)	209, 958, 1438, 1476
Eco32I	GATATC	2 cut(s)	534, 1708
Eco47I	GGWCC	1 cut(s)	1199
Eco47III	AGCGCT	1 cut(s)	1167
Eco53kI	GAGCTC	3 cut(s)	207, 1436, 1474
Eco57I	CTGAAG	1 cut(s)	1905
Eco88I	CYCGRG	1 cut(s)	1383
EcoICRI	GAGCTC	3 cut(s)	207, 1436, 1474
EcoNI	CCTNNNNNAGG	1 cut(s)	1842
EcoRII	CCWGG	1 cut(s)	1371
EcoRV	GATATC	2 cut(s)	534, 1708
EcoT14I	CCWWGG	1 cut(s)	1854
EcoT22I	ATGCAT	1 cut(s)	1343
EcoT38I	GRGCYC	4 cut(s)	209, 958, 1438, 1476
ErhI	CCWWGG	1 cut(s)	1854
Esp3I	CGTCTC	1 cut(s)	243
FalI	AAGNNNNNCTT	4 cut(s)	1288, 1320, 1731, 1763
FaqI	GGGAC	3 cut(s)	308, 718, 1609
FauI	CCCGC	3 cut(s)	252, 632, 1517
FbaI	TGATCA	1 cut(s)	33
FblI	GTMKAC	2 cut(s)	1063, 1784
Fnu4HI	GCNGC	5 cut(s)	124, 257, 264, 1246, 1818
FokI	GGATG	7 cut(s)	601, 605, 658, 1025, 1350, 1589, 1855
FriOI	GRGCYC	4 cut(s)	209, 958, 1438, 1476
Fsp4HI	GCNGC	5 cut(s)	124, 257, 264, 1246, 1818
FspBI	CTAG	6 cut(s)	98, 924, 1203, 1226, 1839, 1902
GlaI	GCGC	3 cut(s)	200, 255, 1167
GluI	GCNGC	5 cut(s)	124, 257, 264, 1246, 1818
HaeII	RGCGCY	1 cut(s)	1169
HaeIII	GGCC	4 cut(s)	266, 1272, 1457, 1802
HapII	CCGG	6 cut(s)	55, 234, 308, 326, 537, 1629
HgaI	GACGC	2 cut(s)	260, 1502
HhaI	GCGC	3 cut(s)	201, 256, 1168
Hin6I	GCGC	3 cut(s)	199, 254, 1166
HinP1I	GCGC	3 cut(s)	199, 254, 1166
HinfI	GANTC	7 cut(s)	673, 860, 1189, 1368, 1807, 1906, 1957
HpaII	CCGG	6 cut(s)	55, 234, 308, 326, 537, 1629
HphI	GGTGA	4 cut(s)	297, 682, 1388, 1475
Hpy166II	GTNNAC	4 cut(s)	318, 848, 1064, 1785
Hpy188I	TCNGA	5 cut(s)	143, 1035, 1290, 1812, 1936
Hpy188III	TCNNGA	9 cut(s)	55, 552, 794, 959, 1197, 1385, 1441, 1501, 1748
Hpy8I	GTNNAC	4 cut(s)	318, 848, 1064, 1785
Hpy99I	CGWCG	1 cut(s)	1278
HpyAV	CCTTC	5 cut(s)	276, 355, 661, 1745, 1888
HpyCH4III	ACNGT	3 cut(s)	322, 1760, 1831
HpyCH4IV	ACGT	4 cut(s)	850, 1467, 1533, 1787
HpyF10VI	GCNNNNNNNGC	7 cut(s)	243, 260, 272, 433, 1165, 1454, 1769
HpyF3I	CTNAG	3 cut(s)	25, 501, 1442
HpySE526I	ACGT	4 cut(s)	850, 1467, 1533, 1787
HspAI	GCGC	3 cut(s)	199, 254, 1166
Kpn2I	TCCGGA	1 cut(s)	54
KpnI	GGTACC	1 cut(s)	1686
Ksp22I	TGATCA	1 cut(s)	33
KspI	CCGCGG	1 cut(s)	260
Kzo9I	GATC	7 cut(s)	33, 228, 684, 991, 1348, 1631, 1841
LmnI	GCTCC	2 cut(s)	1433, 1888
Lsp1109I	GCAGC	3 cut(s)	135, 1232, 1829
LweI	GCATC	6 cut(s)	486, 757, 906, 1255, 1328, 1877
MaeI	CTAG	6 cut(s)	98, 924, 1203, 1226, 1839, 1902
MaeII	ACGT	4 cut(s)	850, 1467, 1533, 1787
MaeIII	GTNAC	4 cut(s)	151, 1216, 1463, 1822
MalI	GATC	7 cut(s)	35, 230, 686, 993, 1350, 1633, 1843
MbiI	CCGCTC	1 cut(s)	246
MboI	GATC	7 cut(s)	33, 228, 684, 991, 1348, 1631, 1841
MboII	GAAGA	7 cut(s)	409, 981, 1193, 1578, 1615, 1782, 1911
MhlI	GDGCHC	5 cut(s)	209, 958, 1161, 1438, 1476
MlsI	TGGCCA	1 cut(s)	1802
MluCI	AATT	8 cut(s)	4, 189, 776, 912, 1091, 1173, 1667, 1833
MluNI	TGGCCA	1 cut(s)	1802
MlyI	GAGTC	3 cut(s)	869, 1183, 1362
MmeI	TCCRAC	2 cut(s)	112, 1657
MnlI	CCTC	6 cut(s)	361, 559, 579, 1599, 1673, 1704
Mox20I	TGGCCA	1 cut(s)	1802
Mph1103I	ATGCAT	1 cut(s)	1343
MroI	TCCGGA	1 cut(s)	54
MscI	TGGCCA	1 cut(s)	1802
MseI	TTAA	3 cut(s)	690, 747, 1509
MslI	CAYNNNNRTG	1 cut(s)	1152
Msp20I	TGGCCA	1 cut(s)	1802
MspA1I	CMGCKG	2 cut(s)	259, 1820
MspCI	CTTAAG	1 cut(s)	1508
MspI	CCGG	6 cut(s)	55, 234, 308, 326, 537, 1629
MspR9I	CCNGG	4 cut(s)	326, 538, 1373, 1629
MvaI	CCWGG	1 cut(s)	1373
MvnI	CGCG	3 cut(s)	201, 254, 259
MwoI	GCNNNNNNNGC	7 cut(s)	243, 260, 272, 433, 1165, 1454, 1769
NciI	CCSGG	3 cut(s)	326, 538, 1629
NdeII	GATC	7 cut(s)	33, 228, 684, 991, 1348, 1631, 1841
NheI	GCTAGC	1 cut(s)	97
NlaIV	GGNNCC	1 cut(s)	1684
NmuCI	GTSAC	2 cut(s)	1216, 1463
NsiI	ATGCAT	1 cut(s)	1343
NspI	RCATGY	2 cut(s)	545, 1045
PciI	ACATGT	1 cut(s)	1041
PfeI	GAWTC	4 cut(s)	673, 1807, 1906, 1957
PflFI	GACNNNGTC	1 cut(s)	1192
PkrI	GCNGC	5 cut(s)	125, 258, 265, 1247, 1819
PleI	GAGTC	3 cut(s)	868, 1183, 1362
PpsI	GAGTC	3 cut(s)	868, 1183, 1362
Ppu21I	YACGTR	1 cut(s)	1534
PscI	ACATGT	1 cut(s)	1041
Psp124BI	GAGCTC	3 cut(s)	209, 1438, 1476
Psp6I	CCWGG	1 cut(s)	1371
PspGI	CCWGG	1 cut(s)	1371
PspN4I	GGNNCC	1 cut(s)	1684
PspPI	GGNCC	1 cut(s)	1199
PsyI	GACNNNGTC	1 cut(s)	1192
PvuII	CAGCTG	1 cut(s)	1820
RsaI	GTAC	3 cut(s)	441, 1280, 1684
RsaNI	GTAC	3 cut(s)	440, 1279, 1683
RseI	CAYNNNNRTG	1 cut(s)	1152
SacI	GAGCTC	3 cut(s)	209, 1438, 1476
SacII	CCGCGG	1 cut(s)	260
SaqAI	TTAA	3 cut(s)	690, 747, 1509
SatI	GCNGC	5 cut(s)	124, 257, 264, 1246, 1818
Sau3AI	GATC	7 cut(s)	33, 228, 684, 991, 1348, 1631, 1841
Sau96I	GGNCC	1 cut(s)	1199
SchI	GAGTC	3 cut(s)	869, 1183, 1362
ScrFI	CCNGG	4 cut(s)	326, 538, 1373, 1629
SduI	GDGCHC	5 cut(s)	209, 958, 1161, 1438, 1476
SfaNI	GCATC	6 cut(s)	486, 757, 906, 1255, 1328, 1877
SfcI	CTRYAG	2 cut(s)	448, 1357
Sfr303I	CCGCGG	1 cut(s)	260
SgrBI	CCGCGG	1 cut(s)	260
SinI	GGWCC	1 cut(s)	1199
SmiMI	CAYNNNNRTG	1 cut(s)	1152
SmlI	CTYRAG	1 cut(s)	1508
SmoI	CTYRAG	1 cut(s)	1508
Sse9I	AATT	8 cut(s)	4, 189, 776, 912, 1091, 1173, 1667, 1833
SspI	AATATT	1 cut(s)	1488
SspMI	CTAG	6 cut(s)	98, 924, 1203, 1226, 1839, 1902
SstI	GAGCTC	3 cut(s)	209, 1438, 1476
StyD4I	CCNGG	4 cut(s)	324, 536, 1371, 1627
StyI	CCWWGG	1 cut(s)	1854
TaaI	ACNGT	3 cut(s)	322, 1760, 1831
TaiI	ACGT	4 cut(s)	853, 1470, 1536, 1790
TaqI	TCGA	5 cut(s)	584, 900, 1634, 1650, 1696
TaqII	GACCGA	1 cut(s)	1182
TasI	AATT	8 cut(s)	4, 189, 776, 912, 1091, 1173, 1667, 1833
TauI	GCSGC	2 cut(s)	259, 266
TfiI	GAWTC	4 cut(s)	673, 1807, 1906, 1957
Tru1I	TTAA	3 cut(s)	690, 747, 1509
Tru9I	TTAA	3 cut(s)	690, 747, 1509
TscAI	CASTG	4 cut(s)	52, 848, 1013, 1221
TseFI	GTSAC	2 cut(s)	1216, 1463
TseI	GCWGC	3 cut(s)	123, 1245, 1817
Tsp45I	GTSAC	2 cut(s)	1216, 1463
TspDTI	ATGAA	6 cut(s)	17, 350, 371, 665, 1616, 1680
TspGWI	ACGGA	2 cut(s)	204, 1164
TspRI	CASTG	4 cut(s)	52, 848, 1013, 1221
Tth111I	GACNNNGTC	1 cut(s)	1192
Vha464I	CTTAAG	1 cut(s)	1508
VpaK11BI	GGWCC	1 cut(s)	1199
XagI	CCTNNNNNAGG	1 cut(s)	1842
XapI	RAATTY	4 cut(s)	4, 776, 1173, 1667
XceI	RCATGY	2 cut(s)	545, 1045
XmiI	GTMKAC	2 cut(s)	1063, 1784
XspI	CTAG	6 cut(s)	98, 924, 1203, 1226, 1839, 1902
Zsp2I	ATGCAT	1 cut(s)	1343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.