RchiOBHm_Chr1g0376341

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0015307
Physical Location & Seq
Forward (+)
63559630 .. 63564936
5307 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59999

Sequence Viewer

Length: 1878 bp
ATGTTCCTCTGGGAATTCCCATTTCACCATTTCTGTCCACTTTTGAAGTTTCTCTCAGAATCTCTCAGCTTCATTAACCTTCAACTCGCTCAAAATGAAATCTTTATAGTTGATACAAGCAGTACTATGCATTCTCTGAAATGGGTTCTCTTGGATTTGATTGGTAAATGCAAAACCTTGAGTTGCTTCAAGCAAATCCATGCAAAGACTGTAACTTCAGGCCTGGCTTGCAATGAATTGGTTGCCACCAATGTTGTTAACTTCTTGGGAAAATCTGTTACCCATTTCGATTACGCTTGTGATTTTCTGAAACAAGTTGATTGGCGTGTGAACTCTTTTCCGTTTAACATGTTGATCTCTGGCTATGCTAATGGTGAAAATGCAGGGGAGGCGGTTTTGGTTTATAGAAGGATAGTTAGAGATGGGTTTATGCCTGATATGTTTACTATTCCGGCGGTTTTGAAATCTTGTGTTAAGTTTTTGGGGATGGGAGAGGGTAGACAGGTCCATGGTGTGGTTGTGAAGATGGGTTTTCAGTGGGATGTGTATGTTCAGAACTCGCTTGTGCATTTCTATAGTGTTTGTGGTGATTGTGGTAGTGCTAGTAAGGTGTTTGATGAAATGCGTGTGAGGGATGTGGTGTCTTGGACTGGTTTGGTGTCCGGGCATGTGAAGGCAGGGTTGTTTGGTGAGGCTGTGTCTTTGTTTTTGAGGATGGATGTGAAGCCGAATGTGGCGACTTTTGTTAGTGTGGTTGTGGCTTGCGGGCGGATGGGGTATTTGAATGTGGGGAAGGGGGTTCATGGATTGATTTTGAAGCATTCGTTGGGGATGGACTTGGTGGTGGGCAATGCTGTTGTGGATATGTATGTTAAGTGTGAGAGTTTGTGCGAGGCAAAGCGGGTTTTTGATGAGCTTCCCGAAAGGGACATTGTGTCTTGGACTAGCTTGATAAGTGGATACGTGCAGTGTAAACGTCCGAGGGAGTCACTAGATTTGTTTTGCAGCATGCAGACTATGGGAATAGAGCCTGATAAGATTATACTTTCCAGTGTGCTTTCAGCTTGTGCCAGTCTTGGGGCTCTTGATTATGGTAGATGGGTCCATGAGTATATTGATCGTAAGGGTATCAAATGGGACGTACATATTGGAACAGCTATGATTGACATGTATTCCAAGTGTGGCTGTATAAATATGGCATTGCGTACTTTCAGTGAATTGCCTTGCGGGAATGTCTCTACTTGGAATGCACTGCTAGGTGGTTTAGCCATGCATGGACATGGGCACGAGGCACTCAAAAAGTTTGAAGAAATGACTAGGTCTGGCATCAGGCCAAATGCAGTTACTTTTCTAGCTGTATTGACAGCTTGCTGCCATTCTGGTTTGATTGATGAAGGCCGCGGGTACTTTCATCAGATGATAAGTACACCTCATAATCTCTCTCCAAGATTAGAACACTATGGATGCATGGTTGATCTGCTCTGTCGGGCTGGACTCCTCGTTGAAGCTCAGAAATTGATAAACACTATGCCAATGCAACCTGATGTGCTGATATTGGGAGCTCTTCTAAGTGCTTGCAAGGCCAAAAATGATGCTGAGCTCTCTCAAGAAATATTAGACCGTCTCCTGCAACTTGAGTGGCAAGATAGTGGGGTTTATGTGCTTCTATCAAACATTTTTGCTGCTAATAAAAGATGGGCTGATGCGACAAGGATAAGGAGGTTGATGAAAAAGAGAGGTATACAGAAGGCCCCTGGCTCAAGTGTCATAGAGGTGGACGGTAAGGCTCACGAATTTTTGGTTGGGGATACTAGCCACCCTCAGAATGAGGATATACATGTAGTGTTAGACATCCTTGCTAATACAAGCCAATCTTAA

Protein Analysis

625

Amino Acids

69.42

Weight (kDa)

6.88

Isoelectric Point (pI)

35.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 309 - 357 9.8e-09 PPR repeat family
PPR PF01535 312 - 342 3.2e-07 PPR repeat
PPR_2 PF13041 411 - 459 5.2e-13 PPR repeat family
PPR_3 PF13812 411 - 457 9.4e-06 Pentatricopeptide repeat domain
PPR PF01535 413 - 443 6.3e-06 PPR repeat
E_motif PF20431 530 - 591 3.3e-18 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015307)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38010
fragaria_vesca FvH4_7g28780
malus_domestica MD01G1194200.v1.1
prunus_persica Prupe.2G288100_v2.0.a1
pyrus_communis pycom01g20450 pycom07g24000
rosa_chinensis RchiOBHm_Chr1g0376341
rosa_laevigata RLG00000026610
rosa_multiflora Rmu_sc0005594.1_g000021 Rmu_sc0016074.1_g000004 Rmu_sc0028960.1_g000001
rosa_roxburghii Rroxscaffold_4G00282190
rosa_rugosa Rorug01G0395700
rosa_samantha Rh1BG370800 Rh1CG383600
rosa_wichuraiana Rw1G036110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 514
AccI GTMKAC 2 cut(s) 499, 1741
AccII CGCG 1 cut(s) 1401
AciI CCGC 8 cut(s) 392, 455, 765, 769, 901, 1227, 1399, 1401
AcsI RAATTY 2 cut(s) 14, 1793
AcuI CTGAAG 1 cut(s) 201
AfaI GTAC 5 cut(s) 124, 1143, 1207, 1406, 1426
AfiI CCNNNNNNNGG 2 cut(s) 514, 1077
AflIII ACRYGT 3 cut(s) 348, 1167, 1837
AgsI TTSAA 8 cut(s) 46, 83, 190, 463, 784, 817, 1307, 1505
AhdI GACNNNNNGTC 1 cut(s) 934
AjnI CCWGG 2 cut(s) 222, 1753
AjuI GAANNNNNNNTTGG 4 cut(s) 809, 841, 1785, 1817
Alw21I GWGCWC 2 cut(s) 1564, 1602
Alw26I GTCTC 2 cut(s) 1240, 1628
AoxI GGCC 5 cut(s) 220, 1331, 1396, 1581, 1749
ApeKI GCWGC 3 cut(s) 1005, 1371, 1682
ApoI RAATTY 2 cut(s) 14, 1793
AspS9I GGNCC 3 cut(s) 505, 1102, 1750
AsuC2I CCSGG 1 cut(s) 664
AsuHPI GGTGA 4 cut(s) 17, 386, 599, 701
AvaII GGWCC 2 cut(s) 505, 1102
BaeGI GKGCMC 1 cut(s) 1287
BanII GRGCYC 3 cut(s) 1084, 1564, 1602
BauI CACGAG 1 cut(s) 1286
Bbv12I GWGCWC 2 cut(s) 1564, 1602
BbvI GCAGC 3 cut(s) 1017, 1358, 1669
BccI CCATC 8 cut(s) 416, 481, 520, 709, 766, 826, 1092, 1689
BciT130I CCWGG 2 cut(s) 224, 1755
BciVI GTATCC 2 cut(s) 953, 1801
BcnI CCSGG 1 cut(s) 664
BcoDI GTCTC 2 cut(s) 1240, 1628
BfaI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
BfmI CTRYAG 1 cut(s) 574
BfuI GTATCC 2 cut(s) 953, 1801
BisI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
BlpI GCTNAGC 1 cut(s) 1596
BlsI GCNGC 4 cut(s) 1007, 1373, 1400, 1684
BmcAI AGTACT 1 cut(s) 124
Bme1390I CCNGG 3 cut(s) 224, 664, 1755
Bme18I GGWCC 2 cut(s) 505, 1102
BmeRI GACNNNNNGTC 1 cut(s) 934
BmgT120I GGNCC 3 cut(s) 505, 1102, 1750
BmiI GGNNCC 2 cut(s) 1103, 1752
BmrFI CCNGG 3 cut(s) 224, 664, 1755
BmsI GCATC 4 cut(s) 1335, 1454, 1582, 1693
Bpu1102I GCTNAGC 1 cut(s) 1596
BpuEI CTTGAG 4 cut(s) 199, 1590, 1655, 1744
BpuMI CCSGG 1 cut(s) 664
BsaAI YACGTR 1 cut(s) 964
BsaJI CCNNGG 4 cut(s) 508, 980, 1399, 1753
Bsc4I CCNNNNNNNGG 2 cut(s) 514, 1077
Bse1I ACTGG 3 cut(s) 655, 1050, 1071
Bse3DI GCAATG 3 cut(s) 238, 856, 1199
BseBI CCWGG 2 cut(s) 224, 1755
BseDI CCNNGG 4 cut(s) 508, 980, 1399, 1753
BseGI GGATG 9 cut(s) 492, 547, 640, 720, 724, 777, 837, 1469, 1851
BseLI CCNNNNNNNGG 2 cut(s) 514, 1077
BseMI GCAATG 3 cut(s) 238, 856, 1199
BseMII CTCAG 5 cut(s) 69, 79, 1523, 1587, 1835
BseNI ACTGG 3 cut(s) 655, 1050, 1071
BseRI GAGGAG 1 cut(s) 1487
BseSI GKGCMC 1 cut(s) 1287
BseXI GCAGC 3 cut(s) 1017, 1358, 1669
BsgI GTGCAG 1 cut(s) 986
Bsh1236I CGCG 1 cut(s) 1401
BshFI GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
BsiHKAI GWGCWC 2 cut(s) 1564, 1602
BsiSI CCGG 2 cut(s) 452, 663
BslFI GGGAC 2 cut(s) 941, 1151
BslI CCNNNNNNNGG 2 cut(s) 514, 1077
BsmAI GTCTC 2 cut(s) 1240, 1628
BsmBI CGTCTC 1 cut(s) 1628
BsmFI GGGAC 2 cut(s) 941, 1151
BsmI GAATGC 3 cut(s) 130, 820, 1252
BsnI GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
Bsp1286I GDGCHC 4 cut(s) 1084, 1287, 1564, 1602
Bsp143I GATC 3 cut(s) 354, 1117, 1474
Bsp1720I GCTNAGC 1 cut(s) 1596
Bsp19I CCATGG 1 cut(s) 508
BspACI CCGC 8 cut(s) 392, 455, 765, 769, 901, 1227, 1399, 1401
BspANI GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
BspCNI CTCAG 5 cut(s) 68, 78, 1522, 1588, 1834
BspFNI CGCG 1 cut(s) 1401
BspLI GGNNCC 2 cut(s) 1103, 1752
BspQI GCTCTTC 1 cut(s) 1569
BsrDI GCAATG 3 cut(s) 238, 856, 1199
BsrI ACTGG 3 cut(s) 655, 1050, 1071
BssECI CCNNGG 4 cut(s) 508, 980, 1399, 1753
BssMI GATC 3 cut(s) 354, 1117, 1474
BssNAI GTATAC 1 cut(s) 1742
BssSI CACGAG 1 cut(s) 1286
BssT1I CCWWGG 1 cut(s) 508
Bst1107I GTATAC 1 cut(s) 1742
Bst2BI CACGAG 1 cut(s) 1286
Bst2UI CCWGG 2 cut(s) 224, 1755
Bst4CI ACNGT 3 cut(s) 211, 1622, 1781
Bst6I CTCTTC 1 cut(s) 1569
BstBAI YACGTR 1 cut(s) 964
BstC8I GCNNGC 6 cut(s) 229, 763, 767, 1010, 1369, 1576
BstDEI CTNAG 6 cut(s) 55, 65, 1509, 1568, 1596, 1821
BstDSI CCRYGG 2 cut(s) 508, 1399
BstF5I GGATG 9 cut(s) 492, 547, 640, 720, 724, 777, 837, 1469, 1851
BstFNI CGCG 1 cut(s) 1401
BstKTI GATC 3 cut(s) 357, 1120, 1477
BstMAI GTCTC 2 cut(s) 1240, 1628
BstMBI GATC 3 cut(s) 354, 1117, 1474
BstMWI GCNNNNNNNGC 3 cut(s) 228, 389, 1580
BstNI CCWGG 2 cut(s) 224, 1755
BstNSI RCATGY 5 cut(s) 352, 671, 1012, 1171, 1841
BstSCI CCNGG 3 cut(s) 222, 662, 1753
BstSFI CTRYAG 1 cut(s) 574
BstSLI GKGCMC 1 cut(s) 1287
BstUI CGCG 1 cut(s) 1401
BstV1I GCAGC 3 cut(s) 1017, 1358, 1669
BstZ17I GTATAC 1 cut(s) 1742
BsuI GTATCC 2 cut(s) 953, 1801
BsuRI GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
BtgI CCRYGG 2 cut(s) 508, 1399
BtsCI GGATG 9 cut(s) 492, 547, 640, 720, 724, 777, 837, 1469, 1851
BtsI GCAGTG 2 cut(s) 974, 1250
BtsIMutI CAGTG 5 cut(s) 542, 974, 1057, 1219, 1250
Cac8I GCNNGC 6 cut(s) 229, 763, 767, 1010, 1369, 1576
Cfr13I GGNCC 3 cut(s) 505, 1102, 1750
Cfr42I CCGCGG 1 cut(s) 1402
Csp6I GTAC 5 cut(s) 123, 1142, 1206, 1405, 1425
CspCI CAANNNNNGTGG 4 cut(s) 235, 270, 1619, 1654
CviQI GTAC 5 cut(s) 123, 1142, 1206, 1405, 1425
DdeI CTNAG 6 cut(s) 55, 65, 1509, 1568, 1596, 1821
DpnI GATC 3 cut(s) 356, 1119, 1476
DpnII GATC 3 cut(s) 354, 1117, 1474
DriI GACNNNNNGTC 1 cut(s) 934
Eam1104I CTCTTC 1 cut(s) 1569
Eam1105I GACNNNNNGTC 1 cut(s) 934
EarI CTCTTC 1 cut(s) 1569
EciI GGCGGA 1 cut(s) 784
Ecl136II GAGCTC 2 cut(s) 1562, 1600
Eco130I CCWWGG 1 cut(s) 508
Eco147I AGGCCT 1 cut(s) 222
Eco24I GRGCYC 3 cut(s) 1084, 1564, 1602
Eco47I GGWCC 2 cut(s) 505, 1102
Eco53kI GAGCTC 2 cut(s) 1562, 1600
Eco57I CTGAAG 1 cut(s) 201
EcoICRI GAGCTC 2 cut(s) 1562, 1600
EcoO109I RGGNCCY 1 cut(s) 1750
EcoRI GAATTC 1 cut(s) 14
EcoRII CCWGG 2 cut(s) 222, 1753
EcoT14I CCWWGG 1 cut(s) 508
EcoT22I ATGCAT 3 cut(s) 132, 1275, 1469
EcoT38I GRGCYC 3 cut(s) 1084, 1564, 1602
ErhI CCWWGG 1 cut(s) 508
Esp3I CGTCTC 1 cut(s) 1628
FalI AAGNNNNNCTT 1 cut(s) 1858
FaqI GGGAC 2 cut(s) 941, 1151
FauI CCCGC 4 cut(s) 758, 894, 1220, 1394
FblI GTMKAC 2 cut(s) 499, 1741
Fnu4HI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
FokI GGATG 9 cut(s) 499, 554, 647, 727, 731, 784, 844, 1476, 1838
FriOI GRGCYC 3 cut(s) 1084, 1564, 1602
Fsp4HI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
FspBI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
GluI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
HaeIII GGCC 5 cut(s) 222, 1333, 1398, 1583, 1751
HapII CCGG 2 cut(s) 452, 663
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HinfI GANTC 3 cut(s) 59, 986, 1494
HpaI GTTAAC 1 cut(s) 259
HpaII CCGG 2 cut(s) 452, 663
HphI GGTGA 4 cut(s) 17, 386, 599, 701
Hpy166II GTNNAC 9 cut(s) 38, 259, 331, 444, 500, 974, 1427, 1742, 1777
Hpy188I TCNGA 8 cut(s) 58, 138, 309, 555, 981, 1416, 1512, 1824
Hpy188III TCNNGA 4 cut(s) 920, 1085, 1607, 1790
Hpy8I GTNNAC 9 cut(s) 38, 259, 331, 444, 500, 974, 1427, 1742, 1777
HpyAV CCTTC 6 cut(s) 89, 402, 667, 787, 1388, 1741
HpyCH4III ACNGT 3 cut(s) 211, 1622, 1781
HpyCH4IV ACGT 3 cut(s) 963, 976, 1140
HpyF10VI GCNNNNNNNGC 3 cut(s) 228, 389, 1580
HpyF3I CTNAG 6 cut(s) 55, 65, 1509, 1568, 1596, 1821
HpySE526I ACGT 3 cut(s) 963, 976, 1140
KspAI GTTAAC 1 cut(s) 259
KspI CCGCGG 1 cut(s) 1402
Kzo9I GATC 3 cut(s) 354, 1117, 1474
LguI GCTCTTC 1 cut(s) 1569
LmnI GCTCC 1 cut(s) 1559
Lsp1109I GCAGC 3 cut(s) 1017, 1358, 1669
LweI GCATC 4 cut(s) 1335, 1454, 1582, 1693
MaeI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
MaeII ACGT 3 cut(s) 963, 976, 1140
MaeIII GTNAC 4 cut(s) 211, 277, 987, 1342
MalI GATC 3 cut(s) 356, 1119, 1476
MboI GATC 3 cut(s) 354, 1117, 1474
MboII GAAGA 3 cut(s) 535, 1319, 1556
MhlI GDGCHC 4 cut(s) 1084, 1287, 1564, 1602
MluCI AATT 5 cut(s) 14, 236, 1217, 1514, 1793
MlyI GAGTC 2 cut(s) 995, 1488
Mph1103I ATGCAT 3 cut(s) 132, 1275, 1469
MseI TTAA 6 cut(s) 75, 258, 345, 474, 873, 1876
MslI CAYNNNNRTG 2 cut(s) 1278, 1772
MspA1I CMGCKG 1 cut(s) 1401
MspI CCGG 2 cut(s) 452, 663
MspR9I CCNGG 3 cut(s) 224, 664, 1755
Mva1269I GAATGC 3 cut(s) 130, 820, 1252
MvaI CCWGG 2 cut(s) 224, 1755
MvnI CGCG 1 cut(s) 1401
MwoI GCNNNNNNNGC 3 cut(s) 228, 389, 1580
NciI CCSGG 1 cut(s) 664
NcoI CCATGG 1 cut(s) 508
NdeII GATC 3 cut(s) 354, 1117, 1474
NlaIV GGNNCC 2 cut(s) 1103, 1752
NmuCI GTSAC 1 cut(s) 987
NsiI ATGCAT 3 cut(s) 132, 1275, 1469
NspI RCATGY 5 cut(s) 352, 671, 1012, 1171, 1841
PaeI GCATGC 1 cut(s) 1012
PceI AGGCCT 1 cut(s) 222
PciI ACATGT 3 cut(s) 348, 1167, 1837
PciSI GCTCTTC 1 cut(s) 1569
PctI GAATGC 3 cut(s) 130, 820, 1252
PfeI GAWTC 1 cut(s) 59
PflFI GACNNNGTC 1 cut(s) 1318
PflMI CCANNNNNTGG 1 cut(s) 514
PkrI GCNGC 4 cut(s) 1007, 1373, 1400, 1684
PleI GAGTC 2 cut(s) 994, 1488
PpsI GAGTC 2 cut(s) 994, 1488
Ppu21I YACGTR 1 cut(s) 964
PscI ACATGT 3 cut(s) 348, 1167, 1837
Psp124BI GAGCTC 2 cut(s) 1564, 1602
Psp6I CCWGG 2 cut(s) 222, 1753
PspGI CCWGG 2 cut(s) 222, 1753
PspN4I GGNNCC 2 cut(s) 1103, 1752
PspPI GGNCC 3 cut(s) 505, 1102, 1750
PsyI GACNNNGTC 1 cut(s) 1318
RsaI GTAC 5 cut(s) 124, 1143, 1207, 1406, 1426
RsaNI GTAC 5 cut(s) 123, 1142, 1206, 1405, 1425
RseI CAYNNNNRTG 2 cut(s) 1278, 1772
SacI GAGCTC 2 cut(s) 1564, 1602
SacII CCGCGG 1 cut(s) 1402
SapI GCTCTTC 1 cut(s) 1569
SaqAI TTAA 6 cut(s) 75, 258, 345, 474, 873, 1876
SatI GCNGC 4 cut(s) 1006, 1372, 1399, 1683
Sau3AI GATC 3 cut(s) 354, 1117, 1474
Sau96I GGNCC 3 cut(s) 505, 1102, 1750
ScaI AGTACT 1 cut(s) 124
SchI GAGTC 2 cut(s) 995, 1488
ScrFI CCNGG 3 cut(s) 224, 664, 1755
SduI GDGCHC 4 cut(s) 1084, 1287, 1564, 1602
SfaNI GCATC 4 cut(s) 1335, 1454, 1582, 1693
SfcI CTRYAG 1 cut(s) 574
Sfr303I CCGCGG 1 cut(s) 1402
SgrBI CCGCGG 1 cut(s) 1402
SinI GGWCC 2 cut(s) 505, 1102
SmiMI CAYNNNNRTG 2 cut(s) 1278, 1772
SmlI CTYRAG 4 cut(s) 178, 1605, 1634, 1759
SmoI CTYRAG 4 cut(s) 178, 1605, 1634, 1759
SphI GCATGC 1 cut(s) 1012
Sse9I AATT 5 cut(s) 14, 236, 1217, 1514, 1793
SseBI AGGCCT 1 cut(s) 222
SsiI CCGC 8 cut(s) 392, 455, 765, 769, 901, 1227, 1399, 1401
SspI AATATT 1 cut(s) 1614
SspMI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
SstI GAGCTC 2 cut(s) 1564, 1602
StuI AGGCCT 1 cut(s) 222
StyD4I CCNGG 3 cut(s) 222, 662, 1753
StyI CCWWGG 1 cut(s) 508
TaaI ACNGT 3 cut(s) 211, 1622, 1781
TaiI ACGT 3 cut(s) 966, 979, 1143
TaqI TCGA 1 cut(s) 288
TasI AATT 5 cut(s) 14, 236, 1217, 1514, 1793
TatI WGTACW 2 cut(s) 122, 1424
TauI GCSGC 1 cut(s) 1401
TfiI GAWTC 1 cut(s) 59
Tru1I TTAA 6 cut(s) 75, 258, 345, 474, 873, 1876
Tru9I TTAA 6 cut(s) 75, 258, 345, 474, 873, 1876
TscAI CASTG 5 cut(s) 542, 974, 1057, 1219, 1257
TseFI GTSAC 1 cut(s) 987
TseI GCWGC 3 cut(s) 1005, 1371, 1682
Tsp45I GTSAC 1 cut(s) 987
TspDTI ATGAA 8 cut(s) 61, 111, 249, 633, 791, 1400, 1407, 1742
TspGWI ACGGA 1 cut(s) 330
TspRI CASTG 5 cut(s) 542, 974, 1057, 1219, 1257
Tth111I GACNNNGTC 1 cut(s) 1318
Van91I CCANNNNNTGG 1 cut(s) 514
VpaK11BI GGWCC 2 cut(s) 505, 1102
XapI RAATTY 2 cut(s) 14, 1793
XceI RCATGY 5 cut(s) 352, 671, 1012, 1171, 1841
XmiI GTMKAC 2 cut(s) 499, 1741
XspI CTAG 7 cut(s) 603, 945, 992, 1256, 1317, 1352, 1812
ZrmI AGTACT 1 cut(s) 124
Zsp2I ATGCAT 3 cut(s) 132, 1275, 1469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.