Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0009718

Physical Location & Seq

Genomic Coordinates Forward (+)

30320779 .. 30324770

Gene Structure 3992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1208800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2358 bp

ATGCCGGATTTTCCCGGGAAAATGAGCTCGGAAAGTGAGGACAAGGGTCGACTTCCGCACTCTGAATCTGACGCACAAGACCTCGCCAAACATTCAAGGATTACATATAGTAGGGATATTTTGTTCTCTCTAGCAAATGTGGATGCAAGCATAAAACTTCCGAGTGGGATCGAATCTTCGATTTTAAGTGAACTTTATTCTGTGTGTCCTCGTTCGTCACAACCTTCTCGTGATTCAGAATATCGTGGACTTCTGGGAAACGGGCACGAACTGGGAGTATATGGACGCTTTCCTGGGGATTCTGCTTCCATGTTGCAAAACAGTCCTCACCTACTCCATAAGAGCAAAGAACCATATCGTCCTCGACAACTCTATAAGGCAGTGAATCGTTTGGGGACAAACCCTTGGAATTCGTACAATGATGAGACTTTTGGTTCTTCCGAGTGTCCAAGTCAGAAGGAAGAAGAGGAGGGAAACATTACAAGAGAAGCACATGAAAAAGCCGTCCAAGAGAAGCAAACTCAAAATTCAAACGAGCATGACGAAACTTCCAAATTTGGCTTGTCTCTTGAGGATTCTACTAACAGTACGAGAAACAAATGTGAAACATCAGAGGAACATGTAGTATCCCCTGCTTCACCTGTCAATTCTTCCAACAGTGCATCACAACAAACTCCTGTATCTGGACAAGAATTATCCCCAGGTCTCCTGGCCATATCCGTTGACGAGGATACTGAAGCAAAATTCTTAATTGATTCGATCATACCAGAGCATTCTGATCTGACCACAATTCACCCCGAGGACCCTGAAATCTGTTGTTCTAAATTTGTTCACCAGTTTCATGTTACAGAGAAAACGCCTAGCTATGGCATATCTTGCTGTGAACGGTCTGAATTTATAGCTCATGAAGTTTCAGAGGACCTGACTCAAGAACCATCATACGGTGGTTCCGGAGAGGGATTGCAATCAACTGATGCATCTTCTTTCATTCAACAAGGTTCTGTTGAAAGGTCAGGAAAGAATGGCATTTCAGAACCGTGCAATTTGCCACTTCCAATTGCAGATAAATATGTCTTTCCTTCAACCACTGAAGAATATGAACTCATTTCAATGGATGGGGAAGACAGCTTGTCCTCAAGCTCTGGTGAACAAAGTAAGGGCAGGGAAACTCAGTTAGTCTCTGATGATTTTGTAGAAAAACTCAGATTGGGTGTTCAATTTGACCCGGGATCAGAATCTATAGCTTATGGAGTGTCAAAGGACTTGACCCGAGAACCATCATATGATACAGTTTCTGGGAAGGGATTGCAATCAACTGATGCAACTTCTTTAATTCAGCAAAGCTCTTTAGAAAGGTCGGCAAGGAATGATGTTTCAGAACCATGCAAGTTCCCACTTCCTATTGACGAATATGCACTCATTTGGCTGGATTGTGAAAATATGCTGTTTTCAAGCTCTGGTGAGAAAAGTAAGAGCAGGGAAAGTCGGTTGGCCTCTAATGATTTGCTCGAAAAAATGAGATCCGGTGTTCCATTTGACCCAGGGTTGATACACAATCCTGTCAGCTGCATTGATGATCTGGAGAGTTTTCCCATTGAGCTTCTTTTGCCCGATGAGGACAGCCTAATTACAGCGGATGACTTCAAGTTTACACCCGAAAAGGACAATAACACAATTGAAGGTAGTCCAGTCAAAGCTGATGGGGTAAACTCAAGTTCACCGTTTGCTATTTCCACGAATCTAACAGGCTTGAATATTTTCAAAGATGAAAAATCTACTCAACGGAGTTCAGAAGATTCCACTTCCTTCTGTAATTCGTATAATGTTGTCACTGGCTTGGGGACTTACAGTAACAGTCAAGAACTACAAGCATACAGAAGCCCTGCAACATTTCATCGGGTACGAACCATACAATCAAGACAGACGAAGCAAACATCTTTTTGTCCATTAGATTCTCATCCAGCTCAAGCTCGCAAGGCCTCCGTCCCATCCCACCATCCTTTCTCTACTAATATACTCCCCAGCACTGTCCATCACTCCCTTGCAAAACAACACCAGCAACTGCTGCAGATGCACGTTCCAGGAAGGATTCCACAACACCAACTTAGTGGGTGTCCCGGAGGTGCAATGACTCATTGTCCTTGTGATCAATCTCGTTACTTGCAGGAGTTCGGCCCTACTCAAGATTTTCCTTTGAACTACCAGCCACCAAGTCATGGATCTTTCGAAATGCCAGGTCTAGGGTTTCGTGTCTATGGGAGCACCGATGATCTGACTTTCAACACCCCTCTGCAAGAAACTCAGCGCAAGGCGGGGACAGGCTTCTACCTTGGCCGGCCATACTCGGACAACCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

786

Amino Acids

86.4

Weight (kDa)

4.9

Isoelectric Point (pI)

62.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009718)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g30290 FvH4_7g30290 FvH4_7g30341
malus_domestica	MD01G1208800.v1.1
prunus_persica	Prupe.2G301400_v2.0.a1 Prupe.2G301400_v2.0.a1 Prupe.2G301400_v2.0.a1 Prupe.2G301400_v2.0.a1 Prupe.2G301400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0378421
rosa_laevigata	RLG00000026430 RLG00000026437
rosa_multiflora	Rmu_sc0000938.1_g000003 Rmu_sc0040188.1_g000001 Rmu_sc0041710.1_g000001
rosa_roxburghii	Rroxscaffold_4G00280470
rosa_rugosa	Rorug01G0408600
rosa_samantha	Rh1AG430100 Rh1BG387800 Rh1CG401300 Rh1DG418900
rosa_wichuraiana	Rw1G037640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2216
AccI	GTMKAC	1 cut(s)	49
AccIII	TCCGGA	1 cut(s)	950
AciI	CCGC	3 cut(s)	56, 1634, 2312
AclWI	GGATC	4 cut(s)	176, 1237, 1515, 2227
AcoI	YGGCCR	3 cut(s)	711, 2332, 2336
AcsI	RAATTY	6 cut(s)	409, 526, 554, 743, 824, 893
AcuI	CTGAAG	2 cut(s)	756, 1110
AfaI	GTAC	3 cut(s)	416, 589, 1902
AfiI	CCNNNNNNNGG	5 cut(s)	683, 866, 941, 2216, 2240
AflIII	ACRYGT	1 cut(s)	619
AhdI	GACNNNNNGTC	2 cut(s)	1129, 2136
AjnI	CCWGG	6 cut(s)	292, 700, 708, 1540, 2080, 2233
AloI	GAACNNNNNNTCC	2 cut(s)	107, 139
Alw21I	GWGCWC	2 cut(s)	29, 2264
Alw26I	GTCTC	4 cut(s)	419, 570, 710, 1183
AlwI	GGATC	4 cut(s)	176, 1237, 1515, 2227
AlwNI	CAGNNNCTG	2 cut(s)	1295, 2062
Ama87I	CYCGRG	4 cut(s)	14, 797, 1225, 1269
Aor13HI	TCCGGA	1 cut(s)	950
AoxI	GGCC	6 cut(s)	711, 1491, 1977, 2173, 2332, 2336
ApeKI	GCWGC	2 cut(s)	1566, 2065
ApoI	RAATTY	6 cut(s)	409, 526, 554, 743, 824, 893
Asp700I	GAANNNNTTC	1 cut(s)	1757
AspLEI	GCGC	1 cut(s)	2307
AspS9I	GGNCC	3 cut(s)	802, 919, 2174
AsuC2I	CCSGG	5 cut(s)	15, 16, 1226, 1227, 2118
AsuHPI	GGTGA	7 cut(s)	320, 630, 785, 824, 1157, 1472, 1710
AsuII	TTCGAA	1 cut(s)	2226
AvaI	CYCGRG	4 cut(s)	14, 797, 1225, 1269
AvaII	GGWCC	2 cut(s)	802, 919
BaeGI	GKGCMC	1 cut(s)	267
BaeI	ACNNNNGTAYC	2 cut(s)	663, 696
BalI	TGGCCA	1 cut(s)	713
BanII	GRGCYC	1 cut(s)	29
BauI	CACGAG	1 cut(s)	228
BbsI	GAAGAC	1 cut(s)	1128
Bbv12I	GWGCWC	2 cut(s)	29, 2264
BbvI	GCAGC	2 cut(s)	1553, 2052
BccI	CCATC	7 cut(s)	943, 1109, 1285, 1694, 1996, 2004, 2040
BceAI	ACGGC	1 cut(s)	488
BciT130I	CCWGG	6 cut(s)	294, 702, 710, 1542, 2082, 2235
BciVI	GTATCC	2 cut(s)	637, 724
BclI	TGATCA	1 cut(s)	2146
BcnI	CCSGG	5 cut(s)	15, 16, 1226, 1227, 2118
BcoDI	GTCTC	4 cut(s)	419, 570, 710, 1183
BfaI	CTAG	3 cut(s)	131, 861, 2240
BfmI	CTRYAG	2 cut(s)	1239, 2066
BfuI	GTATCC	2 cut(s)	637, 724
BisI	GCNGC	2 cut(s)	1567, 2066
BlsI	GCNGC	2 cut(s)	1568, 2067
Bme18I	GGWCC	2 cut(s)	802, 919
BmeRI	GACNNNNNGTC	2 cut(s)	1129, 2136
BmeT110I	CYCGRG	4 cut(s)	14, 797, 1225, 1269
BmgT120I	GGNCC	3 cut(s)	802, 919, 2174
BmiI	GGNNCC	2 cut(s)	804, 949
BmrI	ACTGGG	1 cut(s)	281
BmsI	GCATC	6 cut(s)	133, 671, 964, 986, 1309, 2061
BmuI	ACTGGG	1 cut(s)	281
BoxI	GACNNNNGTC	1 cut(s)	45
BpiI	GAAGAC	1 cut(s)	1128
BpmI	CTGGAG	1 cut(s)	1601
Bpu14I	TTCGAA	1 cut(s)	2226
BpuEI	CTTGAG	6 cut(s)	590, 912, 1120, 1696, 1950, 2166
BpuMI	CCSGG	5 cut(s)	15, 16, 1226, 1227, 2118
BsaBI	GATNNNNATC	4 cut(s)	964, 1234, 1309, 1956
BsaI	GGTCTC	1 cut(s)	710
BsaJI	CCNNGG	9 cut(s)	14, 293, 404, 700, 798, 1225, 1540, 1541, 2329
BsaWI	WCCGGW	2 cut(s)	950, 1523
Bsc4I	CCNNNNNNNGG	5 cut(s)	683, 866, 941, 2216, 2240
Bse118I	RCCGGY	1 cut(s)	2334
Bse1I	ACTGG	4 cut(s)	276, 835, 1688, 1837
Bse3DI	GCAATG	1 cut(s)	2133
Bse8I	GATNNNNATC	4 cut(s)	964, 1234, 1309, 1956
BseAI	TCCGGA	1 cut(s)	950
BseBI	CCWGG	6 cut(s)	294, 702, 710, 1542, 2082, 2235
BseDI	CCNNGG	9 cut(s)	14, 293, 404, 700, 798, 1225, 1540, 1541, 2329
BseGI	GGATG	6 cut(s)	148, 1120, 1642, 1957, 1988, 1996
BseJI	GATNNNNATC	4 cut(s)	964, 1234, 1309, 1956
BseLI	CCNNNNNNNGG	5 cut(s)	683, 866, 941, 2216, 2240
BseMI	GCAATG	1 cut(s)	2133
BseMII	CTCAG	3 cut(s)	1184, 1216, 2315
BseNI	ACTGG	4 cut(s)	276, 835, 1688, 1837
BseRI	GAGGAG	1 cut(s)	482
BseSI	GKGCMC	1 cut(s)	267
BseXI	GCAGC	2 cut(s)	1553, 2052
BseYI	CCCAGC	1 cut(s)	2021
BshFI	GGCC	6 cut(s)	713, 1493, 1979, 2175, 2334, 2338
BsiHKAI	GWGCWC	2 cut(s)	29, 2264
BsiHKCI	CYCGRG	4 cut(s)	14, 797, 1225, 1269
BsiSI	CCGG	7 cut(s)	5, 15, 951, 1226, 1524, 2118, 2335
BslFI	GGGAC	5 cut(s)	409, 1855, 1970, 2100, 2329
BslI	CCNNNNNNNGG	5 cut(s)	683, 866, 941, 2216, 2240
BsmAI	GTCTC	4 cut(s)	419, 570, 710, 1183
BsmFI	GGGAC	5 cut(s)	409, 1855, 1970, 2100, 2329
BsmI	GAATGC	1 cut(s)	772
BsnI	GGCC	6 cut(s)	713, 1493, 1979, 2175, 2334, 2338
Bso31I	GGTCTC	1 cut(s)	710
BsoBI	CYCGRG	4 cut(s)	14, 797, 1225, 1269
Bsp119I	TTCGAA	1 cut(s)	2226
Bsp1286I	GDGCHC	3 cut(s)	29, 267, 2264
Bsp13I	TCCGGA	1 cut(s)	950
Bsp143I	GATC	9 cut(s)	168, 759, 778, 1229, 1520, 1576, 2146, 2219, 2269
BspACI	CCGC	3 cut(s)	56, 1634, 2312
BspANI	GGCC	6 cut(s)	713, 1493, 1979, 2175, 2334, 2338
BspCNI	CTCAG	3 cut(s)	1183, 1215, 2314
BspEI	TCCGGA	1 cut(s)	950
BspHI	TCATGA	1 cut(s)	904
BspLI	GGNNCC	2 cut(s)	804, 949
BspMAI	CTGCAG	1 cut(s)	2070
BspPI	GGATC	4 cut(s)	176, 1237, 1515, 2227
BspT104I	TTCGAA	1 cut(s)	2226
BspTNI	GGTCTC	1 cut(s)	710
BsrDI	GCAATG	1 cut(s)	2133
BsrFI	RCCGGY	1 cut(s)	2334
BsrI	ACTGG	4 cut(s)	276, 835, 1688, 1837
BssAI	RCCGGY	1 cut(s)	2334
BssECI	CCNNGG	9 cut(s)	14, 293, 404, 700, 798, 1225, 1540, 1541, 2329
BssMI	GATC	9 cut(s)	168, 759, 778, 1229, 1520, 1576, 2146, 2219, 2269
BssSI	CACGAG	1 cut(s)	228
BssT1I	CCWWGG	2 cut(s)	404, 2329
Bst2BI	CACGAG	1 cut(s)	228
Bst2UI	CCWGG	6 cut(s)	294, 702, 710, 1542, 2082, 2235
Bst6I	CTCTTC	1 cut(s)	459
BstAPI	GCANNNNNTGC	2 cut(s)	876, 2065
BstBI	TTCGAA	1 cut(s)	2226
BstC8I	GCNNGC	3 cut(s)	148, 1972, 2336
BstDEI	CTNAG	4 cut(s)	1170, 1202, 2105, 2301
BstF5I	GGATG	6 cut(s)	148, 1120, 1642, 1957, 1988, 1996
BstHHI	GCGC	1 cut(s)	2307
BstKTI	GATC	9 cut(s)	171, 762, 781, 1232, 1523, 1579, 2149, 2222, 2272
BstMAI	GTCTC	4 cut(s)	419, 570, 710, 1183
BstMBI	GATC	9 cut(s)	168, 759, 778, 1229, 1520, 1576, 2146, 2219, 2269
BstMWI	GCNNNNNNNGC	5 cut(s)	876, 1606, 1976, 2065, 2071
BstNI	CCWGG	6 cut(s)	294, 702, 710, 1542, 2082, 2235
BstNSI	RCATGY	1 cut(s)	623
BstPAI	GACNNNNGTC	1 cut(s)	45
BstSFI	CTRYAG	2 cut(s)	1239, 2066
BstSLI	GKGCMC	1 cut(s)	267
BstV1I	GCAGC	2 cut(s)	1553, 2052
BstV2I	GAAGAC	1 cut(s)	1128
BstX2I	RGATCY	2 cut(s)	1520, 2219
BstXI	CCANNNNNNTGG	1 cut(s)	2108
BstYI	RGATCY	2 cut(s)	1520, 2219
BsuI	GTATCC	2 cut(s)	637, 724
BsuRI	GGCC	6 cut(s)	713, 1493, 1979, 2175, 2334, 2338
BtsCI	GGATG	6 cut(s)	148, 1120, 1642, 1957, 1988, 1996
BtsI	GCAGTG	1 cut(s)	387
BtsIMutI	CAGTG	5 cut(s)	387, 664, 1086, 1830, 2025
Cac8I	GCNNGC	3 cut(s)	148, 1972, 2336
CaiI	CAGNNNCTG	2 cut(s)	1295, 2062
CciI	TCATGA	1 cut(s)	904
CfoI	GCGC	1 cut(s)	2307
Cfr10I	RCCGGY	1 cut(s)	2334
Cfr13I	GGNCC	3 cut(s)	802, 919, 2174
Cfr9I	CCCGGG	2 cut(s)	14, 1225
CseI	GACGC	2 cut(s)	80, 294
Csp6I	GTAC	3 cut(s)	415, 588, 1901
CviAII	CATG	8 cut(s)	310, 494, 539, 620, 842, 905, 1383, 2216
CviQI	GTAC	3 cut(s)	415, 588, 1901
DdeI	CTNAG	4 cut(s)	1170, 1202, 2105, 2301
DpnI	GATC	9 cut(s)	170, 761, 780, 1231, 1522, 1578, 2148, 2221, 2271
DpnII	GATC	9 cut(s)	168, 759, 778, 1229, 1520, 1576, 2146, 2219, 2269
DriI	GACNNNNNGTC	2 cut(s)	1129, 2136
EaeI	YGGCCR	3 cut(s)	711, 2332, 2336
Eam1104I	CTCTTC	1 cut(s)	459
Eam1105I	GACNNNNNGTC	2 cut(s)	1129, 2136
EarI	CTCTTC	1 cut(s)	459
Ecl136II	GAGCTC	1 cut(s)	27
Eco130I	CCWWGG	2 cut(s)	404, 2329
Eco147I	AGGCCT	1 cut(s)	1979
Eco24I	GRGCYC	1 cut(s)	29
Eco31I	GGTCTC	1 cut(s)	710
Eco47I	GGWCC	2 cut(s)	802, 919
Eco53kI	GAGCTC	1 cut(s)	27
Eco57I	CTGAAG	2 cut(s)	756, 1110
Eco88I	CYCGRG	4 cut(s)	14, 797, 1225, 1269
EcoICRI	GAGCTC	1 cut(s)	27
EcoO109I	RGGNCCY	2 cut(s)	802, 919
EcoRI	GAATTC	1 cut(s)	409
EcoRII	CCWGG	6 cut(s)	292, 700, 708, 1540, 2080, 2233
EcoT14I	CCWWGG	2 cut(s)	404, 2329
EcoT22I	ATGCAT	1 cut(s)	979
EcoT38I	GRGCYC	1 cut(s)	29
ErhI	CCWWGG	2 cut(s)	404, 2329
FaeI	CATG	8 cut(s)	313, 497, 542, 623, 845, 908, 1386, 2219
FaqI	GGGAC	5 cut(s)	409, 1855, 1970, 2100, 2329
FatI	CATG	8 cut(s)	309, 493, 538, 619, 841, 904, 1382, 2215
FauI	CCCGC	1 cut(s)	2305
FauNDI	CATATG	1 cut(s)	1282
FbaI	TGATCA	1 cut(s)	2146
FblI	GTMKAC	1 cut(s)	49
Fnu4HI	GCNGC	2 cut(s)	1567, 2066
FokI	GGATG	6 cut(s)	155, 1127, 1649, 1944, 1975, 1983
FriOI	GRGCYC	1 cut(s)	29
FseI	GGCCGGCC	1 cut(s)	2338
Fsp4HI	GCNGC	2 cut(s)	1567, 2066
FspBI	CTAG	3 cut(s)	131, 861, 2240
GlaI	GCGC	1 cut(s)	2306
GluI	GCNGC	2 cut(s)	1567, 2066
GsaI	CCCAGC	1 cut(s)	2025
GsuI	CTGGAG	1 cut(s)	1601
HaeIII	GGCC	6 cut(s)	713, 1493, 1979, 2175, 2334, 2338
HapII	CCGG	7 cut(s)	5, 15, 951, 1226, 1524, 2118, 2335
HgaI	GACGC	2 cut(s)	80, 294
HhaI	GCGC	1 cut(s)	2307
Hin1II	CATG	8 cut(s)	313, 497, 542, 623, 845, 908, 1386, 2219
Hin6I	GCGC	1 cut(s)	2305
HinP1I	GCGC	1 cut(s)	2305
HincII	GTYRAC	2 cut(s)	50, 724
HindII	GTYRAC	2 cut(s)	50, 724
HpaII	CCGG	7 cut(s)	5, 15, 951, 1226, 1524, 2118, 2335
HphI	GGTGA	7 cut(s)	320, 630, 785, 824, 1157, 1472, 1710
HpyAV	CCTTC	7 cut(s)	234, 451, 1089, 1294, 1673, 1816, 2079
HpyCH4IV	ACGT	1 cut(s)	2076
HpyF10VI	GCNNNNNNNGC	5 cut(s)	876, 1606, 1976, 2065, 2071
HpyF3I	CTNAG	4 cut(s)	1170, 1202, 2105, 2301
HpySE526I	ACGT	1 cut(s)	2076
Hsp92II	CATG	8 cut(s)	313, 497, 542, 623, 845, 908, 1386, 2219
HspAI	GCGC	1 cut(s)	2305
Kpn2I	TCCGGA	1 cut(s)	950
KroI	GCCGGC	1 cut(s)	2334
KroNI	GCCGGC	1 cut(s)	2336
Ksp22I	TGATCA	1 cut(s)	2146
Kzo9I	GATC	9 cut(s)	168, 759, 778, 1229, 1520, 1576, 2146, 2219, 2269
LmnI	GCTCC	1 cut(s)	2259
Lsp1109I	GCAGC	2 cut(s)	1553, 2052
LweI	GCATC	6 cut(s)	133, 671, 964, 986, 1309, 2061
MaeI	CTAG	3 cut(s)	131, 861, 2240
MaeII	ACGT	1 cut(s)	2076
MaeIII	GTNAC	5 cut(s)	216, 844, 1828, 1850, 2156
MalI	GATC	9 cut(s)	170, 761, 780, 1231, 1522, 1578, 2148, 2221, 2271
MboI	GATC	9 cut(s)	168, 759, 778, 1229, 1520, 1576, 2146, 2219, 2269
MboII	GAAGA	9 cut(s)	168, 429, 473, 476, 642, 972, 1103, 1133, 1805
MfeI	CAATTG	2 cut(s)	1056, 1674
MflI	RGATCY	2 cut(s)	1520, 2219
MhlI	GDGCHC	3 cut(s)	29, 267, 2264
MlsI	TGGCCA	1 cut(s)	713
MluNI	TGGCCA	1 cut(s)	713
MlyI	GAGTC	2 cut(s)	919, 2125
MmeI	TCCRAC	1 cut(s)	678
Mox20I	TGGCCA	1 cut(s)	713
Mph1103I	ATGCAT	1 cut(s)	979
MroI	TCCGGA	1 cut(s)	950
MroNI	GCCGGC	1 cut(s)	2334
MroXI	GAANNNNTTC	1 cut(s)	1757
MscI	TGGCCA	1 cut(s)	713
MseI	TTAA	3 cut(s)	185, 749, 1331
MslI	CAYNNNNRTG	1 cut(s)	1109
Msp20I	TGGCCA	1 cut(s)	713
MspA1I	CMGCKG	2 cut(s)	1566, 1634
MspI	CCGG	7 cut(s)	5, 15, 951, 1226, 1524, 2118, 2335
MunI	CAATTG	2 cut(s)	1056, 1674
Mva1269I	GAATGC	1 cut(s)	772
MvaI	CCWGG	6 cut(s)	294, 702, 710, 1542, 2082, 2235
MwoI	GCNNNNNNNGC	5 cut(s)	876, 1606, 1976, 2065, 2071
NaeI	GCCGGC	1 cut(s)	2336
NciI	CCSGG	5 cut(s)	15, 16, 1226, 1227, 2118
NdeI	CATATG	1 cut(s)	1282
NdeII	GATC	9 cut(s)	168, 759, 778, 1229, 1520, 1576, 2146, 2219, 2269
NgoMIV	GCCGGC	1 cut(s)	2334
NlaIII	CATG	8 cut(s)	313, 497, 542, 623, 845, 908, 1386, 2219
NlaIV	GGNNCC	2 cut(s)	804, 949
NmuCI	GTSAC	2 cut(s)	216, 1828
NsiI	ATGCAT	1 cut(s)	979
NspI	RCATGY	1 cut(s)	623
NspV	TTCGAA	1 cut(s)	2226
PagI	TCATGA	1 cut(s)	904
PasI	CCCWGGG	1 cut(s)	1541
PceI	AGGCCT	1 cut(s)	1979
PciI	ACATGT	1 cut(s)	619
PcsI	WCGNNNNNNNCGW	1 cut(s)	540
PctI	GAATGC	1 cut(s)	772
PdiI	GCCGGC	1 cut(s)	2336
PdmI	GAANNNNTTC	1 cut(s)	1757
PflMI	CCANNNNNTGG	1 cut(s)	2216
PfoI	TCCNGGA	2 cut(s)	2080, 2116
PkrI	GCNGC	2 cut(s)	1568, 2067
PleI	GAGTC	2 cut(s)	919, 2125
PpsI	GAGTC	2 cut(s)	919, 2125
PpuMI	RGGWCCY	2 cut(s)	802, 919
PscI	ACATGT	1 cut(s)	619
PshAI	GACNNNNGTC	1 cut(s)	45
Psp124BI	GAGCTC	1 cut(s)	29
Psp5II	RGGWCCY	2 cut(s)	802, 919
Psp6I	CCWGG	6 cut(s)	292, 700, 708, 1540, 2080, 2233
PspFI	CCCAGC	1 cut(s)	2021
PspGI	CCWGG	6 cut(s)	292, 700, 708, 1540, 2080, 2233
PspN4I	GGNNCC	2 cut(s)	804, 949
PspPI	GGNCC	3 cut(s)	802, 919, 2174
PspPPI	RGGWCCY	2 cut(s)	802, 919
PstI	CTGCAG	1 cut(s)	2070
PstNI	CAGNNNCTG	2 cut(s)	1295, 2062
PsuI	RGATCY	2 cut(s)	1520, 2219
PvuII	CAGCTG	1 cut(s)	1566
RigI	GGCCGGCC	1 cut(s)	2338
RsaI	GTAC	3 cut(s)	416, 589, 1902
RsaNI	GTAC	3 cut(s)	415, 588, 1901
RseI	CAYNNNNRTG	1 cut(s)	1109
SacI	GAGCTC	1 cut(s)	29
SalI	GTCGAC	1 cut(s)	48
SaqAI	TTAA	3 cut(s)	185, 749, 1331
SatI	GCNGC	2 cut(s)	1567, 2066
Sau3AI	GATC	9 cut(s)	168, 759, 778, 1229, 1520, 1576, 2146, 2219, 2269
Sau96I	GGNCC	3 cut(s)	802, 919, 2174
SchI	GAGTC	2 cut(s)	919, 2125
SduI	GDGCHC	3 cut(s)	29, 267, 2264
SfaNI	GCATC	6 cut(s)	133, 671, 964, 986, 1309, 2061
SfcI	CTRYAG	2 cut(s)	1239, 2066
SfuI	TTCGAA	1 cut(s)	2226
SinI	GGWCC	2 cut(s)	802, 919
SmaI	CCCGGG	2 cut(s)	16, 1227
SmiMI	CAYNNNNRTG	1 cut(s)	1109
SmlI	CTYRAG	6 cut(s)	569, 927, 1135, 1711, 1965, 2181
SmoI	CTYRAG	6 cut(s)	569, 927, 1135, 1711, 1965, 2181
SseBI	AGGCCT	1 cut(s)	1979
SsiI	CCGC	3 cut(s)	56, 1634, 2312
SspI	AATATT	1 cut(s)	1756
SspMI	CTAG	3 cut(s)	131, 861, 2240
SstI	GAGCTC	1 cut(s)	29
StuI	AGGCCT	1 cut(s)	1979
StyI	CCWWGG	2 cut(s)	404, 2329
TaiI	ACGT	1 cut(s)	2079
TaqI	TCGA	7 cut(s)	49, 171, 179, 364, 758, 1509, 2226
Tru1I	TTAA	3 cut(s)	185, 749, 1331
Tru9I	TTAA	3 cut(s)	185, 749, 1331
TscAI	CASTG	5 cut(s)	387, 664, 1093, 1837, 2032
TseFI	GTSAC	2 cut(s)	216, 1828
TseI	GCWGC	2 cut(s)	1566, 2065
Tsp45I	GTSAC	2 cut(s)	216, 1828
TspDTI	ATGAA	7 cut(s)	510, 830, 921, 976, 1113, 1782, 1883
TspGWI	ACGGA	3 cut(s)	709, 1798, 1972
TspMI	CCCGGG	2 cut(s)	14, 1225
TspRI	CASTG	5 cut(s)	387, 664, 1093, 1837, 2032
Van91I	CCANNNNNTGG	1 cut(s)	2216
VpaK11BI	GGWCC	2 cut(s)	802, 919
XapI	RAATTY	6 cut(s)	409, 526, 554, 743, 824, 893
XceI	RCATGY	1 cut(s)	623
XmaI	CCCGGG	2 cut(s)	14, 1225
XmiI	GTMKAC	1 cut(s)	49
XmnI	GAANNNNTTC	1 cut(s)	1757
XspI	CTAG	3 cut(s)	131, 861, 2240
Zsp2I	ATGCAT	1 cut(s)	979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.