MD02G1111100.v1.1

UPF0183 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0014288
Physical Location & Seq
Reverse (-)
9019640 .. 9024143
4504 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1111100.v1.1.491

Sequence Viewer

Length: 1248 bp
ATGTTGCAGAGACCTCGACGCCGCTGCGAAGGCACTGCCATGGGCGCCATCGTCCTCGATCTCCGGCCCGGCCTCGGAATCGGACCCTTCACCATCGGAATGCCGATATGCGAAGCATTTGCTCAGATAGAGCAGGAGCCTAACATTTACGACGTTGTCCACGTGAAGTTTTACGACGAGGAGCCCCTGAAGTTGGATATTGTTATCAGCTTTCCAGATCATGGTTTTCATCTTCGTTTTGATCCTTGGTCACAGAGGCTACGTCTTGTTGAAATATTTGATATAAAACGGCTTCAAATGCGCTATGCTACTTCTTTGATTGGGGGACCATCTACATTAGCTACTTTTGTAGCTGTATATGCACTATTTGGGCCAACTTTCCCTGGAATTTATGGCAAGGATAGAGGTGTCTACACTCTGTTTTACCCAGGGCTTTCCTTTTCTTTTCCAATTCCTAGCCAGTATACAGACTGCTGCCATAATAGAGAAGTGGAATTGCCATTGGAGTTTCCTGATGGAACCACACCAGTTACGTGCCGTGTCTCTATATATGATAGTTCTACAGATAAAAAAGTTGGTGTGGGGTCCCTAATGGATAAGGCATCTGCTCCTCCATTACCTGTTGGCAGCCTCTATATGGAAGAGGTGCACGTTAAGCTAGGGGAAGAATTGTACTTCAATGTTGGTGGCCAGAATATTCCTTTTGGAGCTTCACCTCAGGATGTTTGGACTGAATTGGGTCGTCCGTGTGGCATACATCAGAAGCAGGTAGACCAAATGGTTATTCATTCTGGCTTGGACCCTCATCCACGGACAACTCTCTGTGGCGATTACTTCTACAATTACTTTACACGTGGTTTGGATATTTTATTTGATGGCCAGACTCACAAAATCAAGAAGTTTGTTTTGCATACAAACTATCCTGGTCATGCAGATTTCAACTCTTACATAAAGTGCAATTTTGCCATCTTTGCATCTGACTGGGGGTCTTATCAGGATGTAAATAACTGCAAACCTAGGATTACACCTAGCACAAAGTGGGAGCAAGTGAAGGAAATCCTTGGGGACTCTGGCCGAGCTGCTATTCAGACTCAAGGTTCTACAAGCAATCCATTTGGATCTACTTTTGTATATGGTTATCAAAATGCTGCATTTGAGGTGATGAAGAATGGTTACATTGCAACCGTGACCCTTTTCCAGTCATCTTGGATGATGGAACTTAATGGGGAAAGCCGTTTGGATTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UPF0183

Protein Analysis

416

Amino Acids

46.61

Weight (kDa)

5.78

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHAF1 PF03676 27 - 399 1.3e-137 Phagosome assembly factor 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014288)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51130
fragaria_vesca FvH4_1g12160 FvH4_1g12160 FvH4_1g12160
malus_domestica MD02G1111100.v1.1 MD15G1249000.v1.1
prunus_persica Prupe.7G165200_v2.0.a1
pyrus_communis pycom15g21910
rosa_chinensis RchiOBHm_Chr2g0099911
rosa_laevigata RLG00000016921
rosa_roxburghii Rroxscaffold_2G00142740
rosa_rugosa Rorug02G0083900
rosa_samantha Rh2AG132900 Rh2BG136300 Rh2CG138000 Rh2DG138400
rosa_wichuraiana Rw2G010340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 757
AccB1I GGYRCC 1 cut(s) 44
AccB7I CCANNNNNTGG 1 cut(s) 221
AccI GTMKAC 3 cut(s) 411, 464, 771
AciI CCGC 1 cut(s) 22
AclWI GGATC 2 cut(s) 236, 1126
AcoI YGGCCR 3 cut(s) 688, 877, 1072
AcsI RAATTY 1 cut(s) 387
AcuI CTGAAG 1 cut(s) 209
AcvI CACGTG 2 cut(s) 163, 854
AcyI GRCGYC 2 cut(s) 19, 45
AdeI CACNNNGTG 1 cut(s) 1038
AfaI GTAC 1 cut(s) 674
AfiI CCNNNNNNNGG 4 cut(s) 74, 193, 221, 637
AflIII ACRYGT 1 cut(s) 851
AgsI TTSAA 4 cut(s) 272, 296, 679, 940
AhdI GACNNNNNGTC 1 cut(s) 985
AjnI CCWGG 3 cut(s) 382, 427, 922
AjuI GAANNNNNNNTTGG 2 cut(s) 768, 800
AluBI AGCT 6 cut(s) 210, 341, 353, 658, 710, 1079
AluI AGCT 6 cut(s) 210, 341, 353, 658, 710, 1079
Alw21I GWGCWC 1 cut(s) 651
Alw26I GTCTC 2 cut(s) 4, 547
Alw44I GTGCAC 1 cut(s) 647
AlwI GGATC 2 cut(s) 236, 1126
AoxI GGCC 6 cut(s) 65, 70, 371, 688, 877, 1072
ApaLI GTGCAC 1 cut(s) 647
ApeKI GCWGC 5 cut(s) 24, 474, 627, 1079, 1148
ApoI RAATTY 1 cut(s) 387
AspA2I CCTAGG 1 cut(s) 1016
AspLEI GCGC 2 cut(s) 47, 303
AspS9I GGNCC 6 cut(s) 66, 83, 326, 371, 585, 799
AsuC2I CCSGG 1 cut(s) 69
AsuHPI GGTGA 3 cut(s) 82, 705, 1171
AvaII GGWCC 4 cut(s) 83, 326, 585, 799
AvrII CCTAGG 1 cut(s) 1016
AxyI CCTNAGG 1 cut(s) 717
BaeGI GKGCMC 1 cut(s) 651
BalI TGGCCA 2 cut(s) 690, 879
BanI GGYRCC 1 cut(s) 44
BanII GRGCYC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 1157, 1189
BbrPI CACGTG 2 cut(s) 163, 854
Bbv12I GWGCWC 1 cut(s) 651
BbvI GCAGC 5 cut(s) 11, 461, 639, 1066, 1135
BccI CCATC 7 cut(s) 56, 101, 337, 509, 869, 974, 1207
BceAI ACGGC 3 cut(s) 305, 522, 1218
BcgI CGANNNNNNTGC 7 cut(s) 6, 17, 30, 40, 51, 101, 135
BciT130I CCWGG 3 cut(s) 384, 429, 924
BcnI CCSGG 1 cut(s) 69
BcoDI GTCTC 2 cut(s) 4, 547
BfaI CTAG 4 cut(s) 456, 659, 1017, 1029
BfmI CTRYAG 1 cut(s) 561
BfoI RGCGCY 1 cut(s) 48
BfuAI ACCTGC 1 cut(s) 757
BisI GCNGC 6 cut(s) 22, 25, 475, 628, 1080, 1149
BlnI CCTAGG 1 cut(s) 1016
BlsI GCNGC 6 cut(s) 23, 26, 476, 629, 1081, 1150
Bme1390I CCNGG 4 cut(s) 69, 384, 429, 924
Bme18I GGWCC 4 cut(s) 83, 326, 585, 799
BmeRI GACNNNNNGTC 1 cut(s) 985
BmgT120I GGNCC 6 cut(s) 66, 83, 326, 371, 585, 799
BmiI GGNNCC 9 cut(s) 46, 85, 138, 183, 327, 520, 586, 587, 801
BmrFI CCNGG 4 cut(s) 69, 384, 429, 924
BmrI ACTGGG 1 cut(s) 991
BmsI GCATC 2 cut(s) 611, 983
BmuI ACTGGG 1 cut(s) 991
BpuEI CTTGAG 1 cut(s) 1077
BpuMI CCSGG 1 cut(s) 69
BsaAI YACGTR 3 cut(s) 163, 534, 854
BsaHI GRCGYC 2 cut(s) 19, 45
BsaI GGTCTC 1 cut(s) 4
BsaJI CCNNGG 9 cut(s) 39, 73, 245, 382, 427, 428, 809, 1016, 1060
Bsc4I CCNNNNNNNGG 4 cut(s) 74, 193, 221, 637
Bse1I ACTGG 4 cut(s) 460, 527, 986, 1198
Bse21I CCTNAGG 1 cut(s) 717
Bse3DI GCAATG 1 cut(s) 1176
BseBI CCWGG 3 cut(s) 384, 429, 924
BseDI CCNNGG 9 cut(s) 39, 73, 245, 382, 427, 428, 809, 1016, 1060
BseGI GGATG 4 cut(s) 727, 805, 1003, 1215
BseLI CCNNNNNNNGG 4 cut(s) 74, 193, 221, 637
BseMI GCAATG 1 cut(s) 1176
BseMII CTCAG 2 cut(s) 137, 731
BseNI ACTGG 4 cut(s) 460, 527, 986, 1198
BseRI GAGGAG 2 cut(s) 194, 600
BseSI GKGCMC 1 cut(s) 651
BseXI GCAGC 5 cut(s) 11, 461, 639, 1066, 1135
BshFI GGCC 6 cut(s) 67, 72, 373, 690, 879, 1074
BshNI GGYRCC 1 cut(s) 44
BsiHKAI GWGCWC 1 cut(s) 651
BsiSI CCGG 2 cut(s) 64, 69
BslFI GGGAC 3 cut(s) 339, 571, 1079
BslI CCNNNNNNNGG 4 cut(s) 74, 193, 221, 637
BsmAI GTCTC 2 cut(s) 4, 547
BsmFI GGGAC 3 cut(s) 339, 571, 1079
BsmI GAATGC 1 cut(s) 105
BsnI GGCC 6 cut(s) 67, 72, 373, 690, 879, 1074
Bso31I GGTCTC 1 cut(s) 4
Bsp1286I GDGCHC 2 cut(s) 186, 651
Bsp143I GATC 4 cut(s) 58, 217, 241, 1118
Bsp19I CCATGG 1 cut(s) 39
BspACI CCGC 1 cut(s) 22
BspANI GGCC 6 cut(s) 67, 72, 373, 690, 879, 1074
BspCNI CTCAG 2 cut(s) 136, 730
BspLI GGNNCC 9 cut(s) 46, 85, 138, 183, 327, 520, 586, 587, 801
BspMI ACCTGC 1 cut(s) 757
BspPI GGATC 2 cut(s) 236, 1126
BspT107I GGYRCC 1 cut(s) 44
BspTNI GGTCTC 1 cut(s) 4
BsrDI GCAATG 1 cut(s) 1176
BsrI ACTGG 4 cut(s) 460, 527, 986, 1198
BssECI CCNNGG 9 cut(s) 39, 73, 245, 382, 427, 428, 809, 1016, 1060
BssMI GATC 4 cut(s) 58, 217, 241, 1118
BssNAI GTATAC 1 cut(s) 465
BssNI GRCGYC 2 cut(s) 19, 45
BssT1I CCWWGG 4 cut(s) 39, 245, 1016, 1060
Bst1107I GTATAC 1 cut(s) 465
Bst2UI CCWGG 3 cut(s) 384, 429, 924
Bst4CI ACNGT 1 cut(s) 1186
Bst6I CTCTTC 1 cut(s) 636
BstACI GRCGYC 2 cut(s) 19, 45
BstBAI YACGTR 3 cut(s) 163, 534, 854
BstDEI CTNAG 2 cut(s) 123, 717
BstDSI CCRYGG 2 cut(s) 39, 809
BstF5I GGATG 4 cut(s) 727, 805, 1003, 1215
BstH2I RGCGCY 1 cut(s) 48
BstHHI GCGC 2 cut(s) 47, 303
BstKTI GATC 4 cut(s) 61, 220, 244, 1121
BstMAI GTCTC 2 cut(s) 4, 547
BstMBI GATC 4 cut(s) 58, 217, 241, 1118
BstMWI GCNNNNNNNGC 6 cut(s) 30, 44, 298, 359, 655, 971
BstNI CCWGG 3 cut(s) 384, 429, 924
BstSCI CCNGG 4 cut(s) 67, 382, 427, 922
BstSFI CTRYAG 1 cut(s) 561
BstSLI GKGCMC 1 cut(s) 651
BstV1I GCAGC 5 cut(s) 11, 461, 639, 1066, 1135
BstX2I RGATCY 1 cut(s) 1118
BstYI RGATCY 1 cut(s) 1118
BstZ17I GTATAC 1 cut(s) 465
Bsu36I CCTNAGG 1 cut(s) 717
BsuRI GGCC 6 cut(s) 67, 72, 373, 690, 879, 1074
BtgI CCRYGG 2 cut(s) 39, 809
BtsCI GGATG 4 cut(s) 727, 805, 1003, 1215
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 1 cut(s) 33
BveI ACCTGC 1 cut(s) 757
CfoI GCGC 2 cut(s) 47, 303
Cfr13I GGNCC 6 cut(s) 66, 83, 326, 371, 585, 799
CseI GACGC 1 cut(s) 27
Csp6I GTAC 1 cut(s) 673
CspCI CAANNNNNGTGG 2 cut(s) 667, 702
CviAII CATG 3 cut(s) 40, 221, 929
CviQI GTAC 1 cut(s) 673
DdeI CTNAG 2 cut(s) 123, 717
DinI GGCGCC 1 cut(s) 46
DpnI GATC 4 cut(s) 60, 219, 243, 1120
DpnII GATC 4 cut(s) 58, 217, 241, 1118
DraIII CACNNNGTG 1 cut(s) 1038
DriI GACNNNNNGTC 1 cut(s) 985
EaeI YGGCCR 3 cut(s) 688, 877, 1072
Eam1104I CTCTTC 1 cut(s) 636
Eam1105I GACNNNNNGTC 1 cut(s) 985
EarI CTCTTC 1 cut(s) 636
Eco130I CCWWGG 4 cut(s) 39, 245, 1016, 1060
Eco24I GRGCYC 1 cut(s) 186
Eco31I GGTCTC 1 cut(s) 4
Eco47I GGWCC 4 cut(s) 83, 326, 585, 799
Eco57I CTGAAG 1 cut(s) 209
Eco72I CACGTG 2 cut(s) 163, 854
Eco81I CCTNAGG 1 cut(s) 717
EcoO109I RGGNCCY 1 cut(s) 585
EcoRII CCWGG 3 cut(s) 382, 427, 922
EcoT14I CCWWGG 4 cut(s) 39, 245, 1016, 1060
EcoT38I GRGCYC 1 cut(s) 186
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
ErhI CCWWGG 4 cut(s) 39, 245, 1016, 1060
FaeI CATG 3 cut(s) 43, 224, 932
FaqI GGGAC 3 cut(s) 339, 571, 1079
FatI CATG 3 cut(s) 39, 220, 928
FblI GTMKAC 3 cut(s) 411, 464, 771
Fnu4HI GCNGC 6 cut(s) 22, 25, 475, 628, 1080, 1149
FokI GGATG 4 cut(s) 734, 792, 1010, 1222
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 6 cut(s) 22, 25, 475, 628, 1080, 1149
FspBI CTAG 4 cut(s) 456, 659, 1017, 1029
GlaI GCGC 2 cut(s) 46, 302
GluI GCNGC 6 cut(s) 22, 25, 475, 628, 1080, 1149
HaeII RGCGCY 1 cut(s) 48
HaeIII GGCC 6 cut(s) 67, 72, 373, 690, 879, 1074
HapII CCGG 2 cut(s) 64, 69
HgaI GACGC 1 cut(s) 27
HhaI GCGC 2 cut(s) 47, 303
Hin1I GRCGYC 2 cut(s) 19, 45
Hin1II CATG 3 cut(s) 43, 224, 932
Hin6I GCGC 2 cut(s) 45, 301
HinP1I GCGC 2 cut(s) 45, 301
HinfI GANTC 5 cut(s) 78, 883, 1067, 1090, 1241
HpaII CCGG 2 cut(s) 64, 69
HphI GGTGA 3 cut(s) 82, 705, 1171
Hpy166II GTNNAC 5 cut(s) 160, 412, 465, 649, 772
Hpy188I TCNGA 7 cut(s) 77, 83, 98, 126, 762, 979, 1089
Hpy188III TCNNGA 5 cut(s) 215, 512, 719, 895, 995
Hpy8I GTNNAC 5 cut(s) 160, 412, 465, 649, 772
Hpy99I CGWCG 3 cut(s) 21, 155, 179
HpyAV CCTTC 3 cut(s) 23, 97, 1045
HpyCH4III ACNGT 1 cut(s) 1186
HpyCH4IV ACGT 6 cut(s) 153, 162, 262, 533, 651, 853
HpyF10VI GCNNNNNNNGC 6 cut(s) 30, 44, 298, 359, 655, 971
HpyF3I CTNAG 2 cut(s) 123, 717
HpySE526I ACGT 6 cut(s) 153, 162, 262, 533, 651, 853
Hsp92I GRCGYC 2 cut(s) 19, 45
Hsp92II CATG 3 cut(s) 43, 224, 932
HspAI GCGC 2 cut(s) 45, 301
KasI GGCGCC 1 cut(s) 44
KflI GGGWCCC 1 cut(s) 585
Kzo9I GATC 4 cut(s) 58, 217, 241, 1118
LmnI GCTCC 5 cut(s) 136, 181, 613, 707, 1042
Lsp1109I GCAGC 5 cut(s) 11, 461, 639, 1066, 1135
LweI GCATC 2 cut(s) 611, 983
MaeI CTAG 4 cut(s) 456, 659, 1017, 1029
MaeII ACGT 6 cut(s) 153, 162, 262, 533, 651, 853
MaeIII GTNAC 4 cut(s) 249, 529, 1172, 1186
MalI GATC 4 cut(s) 60, 219, 243, 1120
MboI GATC 4 cut(s) 58, 217, 241, 1118
MboII GAAGA 4 cut(s) 224, 653, 677, 1177
MflI RGATCY 1 cut(s) 1118
MhlI GDGCHC 2 cut(s) 186, 651
MlsI TGGCCA 2 cut(s) 690, 879
MluCI AATT 7 cut(s) 387, 450, 494, 668, 734, 841, 958
MluNI TGGCCA 2 cut(s) 690, 879
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 3 cut(s) 877, 1061, 1084
MmeI TCCRAC 1 cut(s) 174
Mox20I TGGCCA 2 cut(s) 690, 879
MscI TGGCCA 2 cut(s) 690, 879
MseI TTAA 2 cut(s) 654, 1221
MslI CAYNNNNRTG 2 cut(s) 38, 98
Msp20I TGGCCA 2 cut(s) 690, 879
MspA1I CMGCKG 1 cut(s) 24
MspI CCGG 2 cut(s) 64, 69
MspR9I CCNGG 4 cut(s) 69, 384, 429, 924
Mva1269I GAATGC 1 cut(s) 105
MvaI CCWGG 3 cut(s) 384, 429, 924
MwoI GCNNNNNNNGC 6 cut(s) 30, 44, 298, 359, 655, 971
NarI GGCGCC 1 cut(s) 45
NciI CCSGG 1 cut(s) 69
NcoI CCATGG 1 cut(s) 39
NdeII GATC 4 cut(s) 58, 217, 241, 1118
NlaIII CATG 3 cut(s) 43, 224, 932
NlaIV GGNNCC 9 cut(s) 46, 85, 138, 183, 327, 520, 586, 587, 801
NmeAIII GCCGAG 1 cut(s) 1100
NmuCI GTSAC 2 cut(s) 249, 1186
PasI CCCWGGG 1 cut(s) 428
PcsI WCGNNNNNNNCGW 1 cut(s) 159
PctI GAATGC 1 cut(s) 105
PfeI GAWTC 2 cut(s) 78, 1241
PflFI GACNNNGTC 1 cut(s) 155
PflMI CCANNNNNTGG 1 cut(s) 221
PkrI GCNGC 6 cut(s) 23, 26, 476, 629, 1081, 1150
PleI GAGTC 3 cut(s) 877, 1061, 1084
PluTI GGCGCC 1 cut(s) 48
PmaCI CACGTG 2 cut(s) 163, 854
PmlI CACGTG 2 cut(s) 163, 854
PpsI GAGTC 3 cut(s) 877, 1061, 1084
Ppu21I YACGTR 3 cut(s) 163, 534, 854
PpuMI RGGWCCY 1 cut(s) 585
Psp5II RGGWCCY 1 cut(s) 585
Psp6I CCWGG 3 cut(s) 382, 427, 922
PspCI CACGTG 2 cut(s) 163, 854
PspGI CCWGG 3 cut(s) 382, 427, 922
PspN4I GGNNCC 9 cut(s) 46, 85, 138, 183, 327, 520, 586, 587, 801
PspPI GGNCC 6 cut(s) 66, 83, 326, 371, 585, 799
PspPPI RGGWCCY 1 cut(s) 585
PsuI RGATCY 1 cut(s) 1118
PsyI GACNNNGTC 1 cut(s) 155
RsaI GTAC 1 cut(s) 674
RsaNI GTAC 1 cut(s) 673
RseI CAYNNNNRTG 2 cut(s) 38, 98
SaqAI TTAA 2 cut(s) 654, 1221
SatI GCNGC 6 cut(s) 22, 25, 475, 628, 1080, 1149
Sau3AI GATC 4 cut(s) 58, 217, 241, 1118
Sau96I GGNCC 6 cut(s) 66, 83, 326, 371, 585, 799
SchI GAGTC 3 cut(s) 877, 1061, 1084
ScrFI CCNGG 4 cut(s) 69, 384, 429, 924
SduI GDGCHC 2 cut(s) 186, 651
SfaNI GCATC 2 cut(s) 611, 983
SfcI CTRYAG 1 cut(s) 561
SfoI GGCGCC 1 cut(s) 46
SinI GGWCC 4 cut(s) 83, 326, 585, 799
SmiMI CAYNNNNRTG 2 cut(s) 38, 98
SmlI CTYRAG 1 cut(s) 1092
SmoI CTYRAG 1 cut(s) 1092
Sse9I AATT 7 cut(s) 387, 450, 494, 668, 734, 841, 958
SsiI CCGC 1 cut(s) 22
SspDI GGCGCC 1 cut(s) 44
SspI AATATT 2 cut(s) 276, 697
SspMI CTAG 4 cut(s) 456, 659, 1017, 1029
StyD4I CCNGG 4 cut(s) 67, 382, 427, 922
StyI CCWWGG 4 cut(s) 39, 245, 1016, 1060
TaaI ACNGT 1 cut(s) 1186
TaiI ACGT 6 cut(s) 156, 165, 265, 536, 654, 856
TaqI TCGA 2 cut(s) 16, 57
TasI AATT 7 cut(s) 387, 450, 494, 668, 734, 841, 958
TatI WGTACW 1 cut(s) 672
TauI GCSGC 1 cut(s) 24
TfiI GAWTC 2 cut(s) 78, 1241
Tru1I TTAA 2 cut(s) 654, 1221
Tru9I TTAA 2 cut(s) 654, 1221
TscAI CASTG 1 cut(s) 40
TseFI GTSAC 2 cut(s) 249, 1186
TseI GCWGC 5 cut(s) 24, 474, 627, 1079, 1148
Tsp45I GTSAC 2 cut(s) 249, 1186
TspDTI ATGAA 4 cut(s) 218, 776, 1178, 1233
TspGWI ACGGA 2 cut(s) 735, 826
TspRI CASTG 1 cut(s) 40
Tth111I GACNNNGTC 1 cut(s) 155
Van91I CCANNNNNTGG 1 cut(s) 221
VneI GTGCAC 1 cut(s) 647
VpaK11BI GGWCC 4 cut(s) 83, 326, 585, 799
XapI RAATTY 1 cut(s) 387
XmaJI CCTAGG 1 cut(s) 1016
XmiI GTMKAC 3 cut(s) 411, 464, 771
XspI CTAG 4 cut(s) 456, 659, 1017, 1029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.