Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002701

Physical Location & Seq

Genomic Coordinates Reverse (-)

9285575 .. 9289681

Gene Structure 4107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1114100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2838 bp

ATGGTTGAACAGTTAGCCATGAGTATAGTTTGGATGTTGGTGTTGATGATTTTCTGTAGTGGGTTTGCCTCAAATGGTGCCAGCACCACCAATGTCTCCACTAGACCAGATGTTGTGAAACTCGGGGCGATTTTCTCTTTCGATGCCCTTATTGGCAAAGTTGCCAAAGTGGCAATAGAAGCCGCAGTCGAAGATGTGAATTCTGATCCATCTGTTCTTGGTGGAACCAAGATGAAAGTTACAATGCAGGACTCAAATTACAGTGGACTTCTGGGCCTTATTGAAGCCTTACGGTTCATGGAGGAAGACACAATGGCGATAATTGGACCGCTGAATGCTGTCACGGCTCATATATTATCTCATATTGCAAATGAGCTCCTAGTTCCTCTAGTATCATTTTCGGTAACAGACCCCACGCTGTCAGCACTTCAGTATCCTTTCTTTGTTAGAACTGTCCAAAACGGTCTTTATCAAATGGCTGCGATAGCAGATATGGTTGATCACTACGGATGGAGAGAGGTAATTGCACTCTATGTTGACGATGACCATGGGAGAAATGGGATTACTGCATTATCAAATAAGCTTGCTGAGAAACGATGCAGGATATCATACAAGGCGCCATTGGTCCTTGATTCTAACCGGGATAGCATCACTGATGTACTGGTTAAAGTGGGTTTAACAGAGTCTCGGATTATTGTTGTTCATGCTTATGACAGTTGGGGTTCTCTGGTGTTCGAAGTGGCCAAGTATCTTGGCATGATGGGAACTGGATATGTCTGGATAGCCACCAGTTGGCTTTCTACTTTAATAGATACCAACTCTCCCCTCCCTTCAGGCACGATGGATGATATGCAGGGAGTTCTAACATTGCGCATGTACACGCCAGAGACAGAACTGAAGCGAAAATTTGTTTCAAGGTGGAGCAACTTGACTAGTGGACGTACATCTAAAGGCCCAATGGGGTTGAATGCTTACGGTCTTTATGCCTACGATACTGTGTGGTTGCTTGCTCATGCAATTAATGCCTTTTTTGATCAAGGGGGAAACCTTTCATTCTCAAATGATTCAAGGTTGACTCAGCTTCGCGGAGGGGAGCTAAATCTTGATGCTCTGAGCATCTTTAATGGAGGCAATCTGTTTTTGAAAAACATTTTGCAGGTTAATATGACTGGTGTATCTGGCCAGATAATGTTTACTCCACAAAAAGACCTCGTTCATCCTGCATTGGAGATCATAAATGTGATTGGATCGGGGATTAGGAAGGTTGGTTATTGGTCCAATTTTTCGGGATTATCAGTTGTGCCTCCAGAAACACTTTACACAAAGGCACCAAATCATTCTAATTCAAGTGATAAACTGTACGGTGTGGTTTGGCCTGGACAAACAACACAGAAGCCTCGTGGTTGGGTGTTTCCAAACAACGGAAGGCACTTGAGGTTTGGAGTCTCAAGACGTGTTAGTTTTCGTGAATTCGTTTCATACACAGATGGCAATGACATGTTCACTGGGTACTGCATAGATGTTTTTACTGCTGCATTGAACTCGTTGCCCTATGCTGTCCCATACAAACTAATTCCCTTCGGTGATGGCCATAAGAACCCAAGTGTCACTGAGCTTGTGCACAAAATCCAAACGGGTGAATTCGATGGAGCAATAAGTGACATTGCAATCACCACCAACCGAACAAGGATGGCGGATTTTACGCAGCCATATATCGAATCTGGGCTAGTAGTAGTTGCATCTGTTAAGCCAACATTGAATTCAAATCCTTGGGCTTTCCTGAGGCCATTCAGTCCACTAATGTGGGGCGTCACAGCCGCCTTCTTTCTCATTGTTGGAACAGTTGTTTGGATTTTAGAGCATAGGCAGAATGATGAATTTCGGGGGCCTCCTAAAAGACAACTTGTCACGATTCTGTGGTTTAGCTTTTCGACTTGGTTCTTTGCACATAGAGAAAATACAGTTAGCACCCTCGGTCGCTTAGTTCTAATTATATGGCTGTTTGTTGTTCTTATAATCAACTCAAGCTACACTGCAAGTTTGACCTCAATCCTTACAGTGCAAAGGCTTTCTTCCTCTATCAAAGGCCTTGAAGATTTGCTTTCAAGCAACGATCCCATTGGCTACCAGCAGGGTTCATTTGCCCGGAATTATCTAATTGATGAACTCAACGTTGACGAGTCCAGACTCGTTCCTCTTATCACGCCAGAAGACTATGCCAAAGCCTTGAAAGATGGTCCCCATAAAGGTGGTGTCACTGCAGTGATTGACGAGCGTGCATTCATTGAGCTATTCCTCGCAAGCAGATGTGAATTCAGTGTTGTGGGTCAAGAGTTCACCAAAACCGGTTGGGGATTTGCTTTTGCGAGGGACTCGCCTTTAGCGGTGGACCTGTCTACTGCACTTCTGAAGCTGTCGGAGAACGGGGATCTACAAAGGATCTATGATAAATGGCTTATGAGAACTCCTTGTGCCTCAAATGGTGGAAAGCTGCAAGTCGACAGGCTTCAACTCAAAAGCTTCAGGGGCCTCTTTATTATTTGTGGTGCAGCTTGCTTACTTGCACTCGCTATATATTTCTGTATTATGCTGCGCCAGTTCAGCAGGCACTACACCGAGGAACTGGTCTCTACTGGTGGCTCCACGTCCGCACGCGTTCAAACATTTCTCACATTTGTTGATGAGAAGGAAGAGGAAGTGAAAAGCCGGTCGAAAAGAAGACGAATGGAGAGGTTATCAAATAGAAGCGCGGATGATGAAGCGATGTCTAGCTCGAAAAGAAGACACCTTGATCAATCATCTTCAAGTCCGACTTTTGATAATGGTAATCCTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

946

Amino Acids

104.8

Weight (kDa)

6.78

Isoelectric Point (pI)

37.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	49 - 348	1.7e-12	Periplasmic binding protein
ANF_receptor	PF01094	56 - 416	3.8e-88	Receptor family ligand binding region
SBP_bac_3	PF00497	493 - 819	2.4e-12	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	495 - 581	1e-08	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	601 - 852	1.7e-36	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002701)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191
malus_domestica	MD02G1114100.v1.1 MD15G1229200.v1.1
prunus_persica	Prupe.7G106900_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1
pyrus_communis	pycom02g08900
rosa_chinensis	RchiOBHm_Chr2g0096991
rosa_laevigata	RLG00000016690
rosa_multiflora	Rmu_co8480363.1_g000001 Rmu_sc0005782.1_g000006
rosa_roxburghii	Rroxscaffold_2G00145100
rosa_rugosa	Rorug02G0062600 Rorug02G0062700
rosa_samantha	Rh2AG110500 Rh2BG112300 Rh2CG114400 Rh2DG113600
rosa_wichuraiana	Rw2G008550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2015
Acc16I	TGCGCA	1 cut(s)	872
Acc36I	ACCTGC	1 cut(s)	1147
AccB1I	GGYRCC	3 cut(s)	77, 616, 1327
AccB7I	CCANNNNNTGG	1 cut(s)	792
AccI	GTMKAC	2 cut(s)	2396, 2499
AccII	CGCG	3 cut(s)	1086, 2655, 2750
AciI	CCGC	8 cut(s)	183, 329, 1086, 1694, 1818, 2384, 2649, 2750
AclI	AACGTT	1 cut(s)	2172
AclWI	GGATC	5 cut(s)	200, 1255, 2108, 2436, 2447
AcoI	YGGCCR	3 cut(s)	741, 1180, 1588
AcsI	RAATTY	7 cut(s)	199, 905, 1469, 1640, 1759, 1877, 2312
AcuI	CTGAAG	5 cut(s)	413, 816, 917, 2429, 2506
AcyI	GRCGYC	2 cut(s)	617, 1809
AfaI	GTAC	5 cut(s)	660, 878, 943, 1361, 1511
AfiI	CCNNNNNNNGG	3 cut(s)	792, 1421, 2246
AflIII	ACRYGT	3 cut(s)	1453, 1497, 2653
AgeI	ACCGGT	1 cut(s)	2345
AhdI	GACNNNNNGTC	1 cut(s)	1904
AhlI	ACTAGT	1 cut(s)	932
AjiI	CACGTC	2 cut(s)	1454, 2646
AjnI	CCWGG	1 cut(s)	1375
AjuI	GAANNNNNNNTTGG	4 cut(s)	1744, 1776, 1831, 1863
AleI	CACNNNNGTG	2 cut(s)	1801, 2261
Alw21I	GWGCWC	2 cut(s)	378, 1623
Alw26I	GTCTC	5 cut(s)	100, 690, 881, 1450, 2632
Alw44I	GTGCAC	1 cut(s)	1619
AlwI	GGATC	5 cut(s)	200, 1255, 2108, 2436, 2447
Ama87I	CYCGRG	1 cut(s)	122
ApaLI	GTGCAC	1 cut(s)	1619
ApeKI	GCWGC	6 cut(s)	479, 1532, 1705, 2491, 2549, 2590
ApoI	RAATTY	7 cut(s)	199, 905, 1469, 1640, 1759, 1877, 2312
AseI	ATTAAT	1 cut(s)	1020
AsiGI	ACCGGT	1 cut(s)	2345
Asp700I	GAANNNNTTC	1 cut(s)	1048
AspLEI	GCGC	4 cut(s)	619, 873, 2595, 2750
AspS9I	GGNCC	9 cut(s)	274, 326, 625, 953, 1275, 1886, 2237, 2389, 2527
AsuC2I	CCSGG	2 cut(s)	641, 2146
AsuHPI	GGTGA	4 cut(s)	1595, 1649, 1663, 2329
AsuII	TTCGAA	1 cut(s)	735
AvaI	CYCGRG	1 cut(s)	122
AvaII	GGWCC	5 cut(s)	326, 625, 1275, 2237, 2389
AxyI	CCTNAGG	1 cut(s)	1781
BaeGI	GKGCMC	1 cut(s)	1623
BaeI	ACNNNNGTAYC	4 cut(s)	416, 449, 1158, 1191
BalI	TGGCCA	3 cut(s)	743, 1182, 1590
BanI	GGYRCC	3 cut(s)	77, 616, 1327
BanII	GRGCYC	1 cut(s)	378
BauI	CACGAG	1 cut(s)	1398
BbsI	GAAGAC	4 cut(s)	312, 2217, 2725, 2788
Bbv12I	GWGCWC	2 cut(s)	378, 1623
BbvI	GCAGC	6 cut(s)	466, 1519, 1717, 2478, 2561, 2577
BccI	CCATC	9 cut(s)	217, 504, 754, 835, 1481, 1580, 1640, 1684, 2228
BceAI	ACGGC	1 cut(s)	360
BcgI	CGANNNNNNTGC	2 cut(s)	1524, 1558
BciT130I	CCWGG	1 cut(s)	1377
BciVI	GTATCC	1 cut(s)	444
BclI	TGATCA	3 cut(s)	499, 1033, 2791
BcnI	CCSGG	2 cut(s)	641, 2146
BcoDI	GTCTC	5 cut(s)	100, 690, 881, 1450, 2632
BcuI	ACTAGT	1 cut(s)	932
BfaI	CTAG	6 cut(s)	102, 380, 389, 933, 1727, 2769
BfmI	CTRYAG	2 cut(s)	55, 2259
BfoI	RGCGCY	1 cut(s)	620
BfuAI	ACCTGC	1 cut(s)	1147
BfuI	GTATCC	1 cut(s)	444
BglI	GCCNNNNNGGC	1 cut(s)	170
BisI	GCNGC	8 cut(s)	183, 480, 1533, 1706, 1818, 2492, 2550, 2591
BlsI	GCNGC	8 cut(s)	184, 481, 1534, 1707, 1819, 2493, 2551, 2592
Bme1390I	CCNGG	3 cut(s)	641, 1377, 2146
Bme18I	GGWCC	5 cut(s)	326, 625, 1275, 2237, 2389
BmeRI	GACNNNNNGTC	1 cut(s)	1904
BmeT110I	CYCGRG	1 cut(s)	122
BmgBI	CACGTC	2 cut(s)	1454, 2646
BmgT120I	GGNCC	9 cut(s)	274, 326, 625, 953, 1275, 1886, 2237, 2389, 2527
BmiI	GGNNCC	8 cut(s)	79, 226, 618, 1329, 1887, 2239, 2528, 2641
BmrFI	CCNGG	3 cut(s)	641, 1377, 2146
BmrI	ACTGGG	1 cut(s)	1515
BmsI	GCATC	6 cut(s)	133, 587, 657, 1096, 1125, 1748
BmuI	ACTGGG	1 cut(s)	1515
BpiI	GAAGAC	4 cut(s)	312, 2217, 2725, 2788
BpmI	CTGGAG	1 cut(s)	1290
Bpu14I	TTCGAA	1 cut(s)	735
BpuEI	CTTGAG	3 cut(s)	1432, 1453, 2008
BpuMI	CCSGG	2 cut(s)	641, 2146
BsaHI	GRCGYC	2 cut(s)	617, 1809
BsaI	GGTCTC	1 cut(s)	2632
BsaJI	CCNNGG	4 cut(s)	547, 1769, 1972, 2616
BsaWI	WCCGGW	1 cut(s)	2345
BsaXI	ACNNNNNCTCC	2 cut(s)	805, 835
Bsc4I	CCNNNNNNNGG	3 cut(s)	792, 1421, 2246
Bse118I	RCCGGY	2 cut(s)	2345, 2706
Bse1I	ACTGG	8 cut(s)	666, 772, 789, 1174, 1510, 2596, 2628, 2638
Bse21I	CCTNAGG	1 cut(s)	1781
Bse3DI	GCAATG	3 cut(s)	866, 1498, 1662
BseBI	CCWGG	1 cut(s)	1377
BseDI	CCNNGG	4 cut(s)	547, 1769, 1972, 2616
BseGI	GGATG	6 cut(s)	39, 515, 850, 1216, 1695, 2758
BseLI	CCNNNNNNNGG	3 cut(s)	792, 1421, 2246
BseMI	GCAATG	3 cut(s)	866, 1498, 1662
BseMII	CTCAG	5 cut(s)	579, 1091, 1103, 1602, 1772
BseNI	ACTGG	8 cut(s)	666, 772, 789, 1174, 1510, 2596, 2628, 2638
BseSI	GKGCMC	1 cut(s)	1623
BseXI	GCAGC	6 cut(s)	466, 1519, 1717, 2478, 2561, 2577
BsgI	GTGCAG	2 cut(s)	2385, 2568
Bsh1236I	CGCG	3 cut(s)	1086, 2655, 2750
Bsh1285I	CGRYCG	2 cut(s)	1978, 2711
BshNI	GGYRCC	3 cut(s)	77, 616, 1327
BshTI	ACCGGT	1 cut(s)	2345
BsiEI	CGRYCG	2 cut(s)	1978, 2711
BsiHKAI	GWGCWC	2 cut(s)	378, 1623
BsiHKCI	CYCGRG	1 cut(s)	122
BsiSI	CCGG	4 cut(s)	640, 2146, 2346, 2707
BslFI	GGGAC	3 cut(s)	1544, 2223, 2384
BslI	CCNNNNNNNGG	3 cut(s)	792, 1421, 2246
BsmAI	GTCTC	5 cut(s)	100, 690, 881, 1450, 2632
BsmFI	GGGAC	3 cut(s)	1544, 2223, 2384
BsmI	GAATGC	3 cut(s)	340, 973, 2279
Bso31I	GGTCTC	1 cut(s)	2632
BsoBI	CYCGRG	1 cut(s)	122
Bsp119I	TTCGAA	1 cut(s)	735
Bsp1286I	GDGCHC	2 cut(s)	378, 1623
Bsp1407I	TGTACA	1 cut(s)	876
Bsp143I	GATC	9 cut(s)	205, 499, 1033, 1230, 1247, 2113, 2428, 2439, 2791
Bsp19I	CCATGG	1 cut(s)	547
BspACI	CCGC	8 cut(s)	183, 329, 1086, 1694, 1818, 2384, 2649, 2750
BspCNI	CTCAG	5 cut(s)	580, 1090, 1104, 1603, 1773
BspFNI	CGCG	3 cut(s)	1086, 2655, 2750
BspLI	GGNNCC	8 cut(s)	79, 226, 618, 1329, 1887, 2239, 2528, 2641
BspMAI	CTGCAG	1 cut(s)	2263
BspMI	ACCTGC	1 cut(s)	1147
BspPI	GGATC	5 cut(s)	200, 1255, 2108, 2436, 2447
BspT104I	TTCGAA	1 cut(s)	735
BspT107I	GGYRCC	3 cut(s)	77, 616, 1327
BspTNI	GGTCTC	1 cut(s)	2632
BsrDI	GCAATG	3 cut(s)	866, 1498, 1662
BsrFI	RCCGGY	2 cut(s)	2345, 2706
BsrGI	TGTACA	1 cut(s)	876
BsrI	ACTGG	8 cut(s)	666, 772, 789, 1174, 1510, 2596, 2628, 2638
BssAI	RCCGGY	2 cut(s)	2345, 2706
BssECI	CCNNGG	4 cut(s)	547, 1769, 1972, 2616
BssMI	GATC	9 cut(s)	205, 499, 1033, 1230, 1247, 2113, 2428, 2439, 2791
BssNI	GRCGYC	2 cut(s)	617, 1809
BssSI	CACGAG	1 cut(s)	1398
BssT1I	CCWWGG	2 cut(s)	547, 1769
Bst2BI	CACGAG	1 cut(s)	1398
Bst2UI	CCWGG	1 cut(s)	1377
Bst6I	CTCTTC	1 cut(s)	2685
BstACI	GRCGYC	2 cut(s)	617, 1809
BstAPI	GCANNNNNTGC	1 cut(s)	1022
BstAUI	TGTACA	1 cut(s)	876
BstBI	TTCGAA	1 cut(s)	735
BstC8I	GCNNGC	8 cut(s)	82, 585, 1008, 2277, 2302, 2554, 2606, 2653
BstDEI	CTNAG	6 cut(s)	588, 1077, 1112, 1611, 1781, 1981
BstDSI	CCRYGG	1 cut(s)	547
BstF5I	GGATG	6 cut(s)	39, 515, 850, 1216, 1695, 2758
BstFNI	CGCG	3 cut(s)	1086, 2655, 2750
BstH2I	RGCGCY	1 cut(s)	620
BstHHI	GCGC	4 cut(s)	619, 873, 2595, 2750
BstKTI	GATC	9 cut(s)	208, 502, 1036, 1233, 1250, 2116, 2431, 2442, 2794
BstMAI	GTCTC	5 cut(s)	100, 690, 881, 1450, 2632
BstMBI	GATC	9 cut(s)	205, 499, 1033, 1230, 1247, 2113, 2428, 2439, 2791
BstMCI	CGRYCG	2 cut(s)	1978, 2711
BstMWI	GCNNNNNNNGC	7 cut(s)	170, 179, 344, 485, 1022, 2526, 2601
BstNI	CCWGG	1 cut(s)	1377
BstNSI	RCATGY	2 cut(s)	877, 1501
BstSCI	CCNGG	3 cut(s)	639, 1375, 2144
BstSFI	CTRYAG	2 cut(s)	55, 2259
BstSLI	GKGCMC	1 cut(s)	1623
BstUI	CGCG	3 cut(s)	1086, 2655, 2750
BstV1I	GCAGC	6 cut(s)	466, 1519, 1717, 2478, 2561, 2577
BstV2I	GAAGAC	4 cut(s)	312, 2217, 2725, 2788
BstX2I	RGATCY	2 cut(s)	2428, 2439
BstXI	CCANNNNNNTGG	2 cut(s)	1803, 2249
BstYI	RGATCY	2 cut(s)	2428, 2439
Bsu36I	CCTNAGG	1 cut(s)	1781
BsuI	GTATCC	1 cut(s)	444
BtgI	CCRYGG	1 cut(s)	547
BtgZI	GCGATG	1 cut(s)	2777
BtrI	CACGTC	2 cut(s)	1454, 2646
BtsCI	GGATG	6 cut(s)	39, 515, 850, 1216, 1695, 2758
BtsI	GCAGTG	3 cut(s)	2031, 2256, 2268
BtsIMutI	CAGTG	9 cut(s)	268, 651, 1503, 1608, 2031, 2064, 2256, 2268, 2323
BveI	ACCTGC	1 cut(s)	1147
Cac8I	GCNNGC	8 cut(s)	82, 585, 1008, 2277, 2302, 2554, 2606, 2653
CfoI	GCGC	4 cut(s)	619, 873, 2595, 2750
Cfr10I	RCCGGY	2 cut(s)	2345, 2706
Cfr13I	GGNCC	9 cut(s)	274, 326, 625, 953, 1275, 1886, 2237, 2389, 2527
CseI	GACGC	1 cut(s)	1798
Csp6I	GTAC	5 cut(s)	659, 877, 942, 1360, 1510
CspAI	ACCGGT	1 cut(s)	2345
CviAII	CATG	8 cut(s)	19, 298, 548, 704, 757, 874, 1013, 1498
CviQI	GTAC	5 cut(s)	659, 877, 942, 1360, 1510
DdeI	CTNAG	6 cut(s)	588, 1077, 1112, 1611, 1781, 1981
DinI	GGCGCC	1 cut(s)	618
DpnI	GATC	9 cut(s)	207, 501, 1035, 1232, 1249, 2115, 2430, 2441, 2793
DpnII	GATC	9 cut(s)	205, 499, 1033, 1230, 1247, 2113, 2428, 2439, 2791
DriI	GACNNNNNGTC	1 cut(s)	1904
EaeI	YGGCCR	3 cut(s)	741, 1180, 1588
Eam1104I	CTCTTC	1 cut(s)	2685
Eam1105I	GACNNNNNGTC	1 cut(s)	1904
EarI	CTCTTC	1 cut(s)	2685
EciI	GGCGGA	1 cut(s)	1709
Ecl136II	GAGCTC	1 cut(s)	376
Eco130I	CCWWGG	2 cut(s)	547, 1769
Eco147I	AGGCCT	1 cut(s)	2088
Eco24I	GRGCYC	1 cut(s)	378
Eco31I	GGTCTC	1 cut(s)	2632
Eco32I	GATATC	1 cut(s)	606
Eco47I	GGWCC	5 cut(s)	326, 625, 1275, 2237, 2389
Eco53kI	GAGCTC	1 cut(s)	376
Eco57I	CTGAAG	5 cut(s)	413, 816, 917, 2429, 2506
Eco81I	CCTNAGG	1 cut(s)	1781
Eco88I	CYCGRG	1 cut(s)	122
EcoICRI	GAGCTC	1 cut(s)	376
EcoO109I	RGGNCCY	2 cut(s)	1886, 2527
EcoRI	GAATTC	5 cut(s)	199, 1469, 1640, 1759, 2312
EcoRII	CCWGG	1 cut(s)	1375
EcoRV	GATATC	1 cut(s)	606
EcoT14I	CCWWGG	2 cut(s)	547, 1769
EcoT38I	GRGCYC	1 cut(s)	378
EgeI	GGCGCC	1 cut(s)	618
EheI	GGCGCC	1 cut(s)	618
ErhI	CCWWGG	2 cut(s)	547, 1769
FaeI	CATG	8 cut(s)	22, 301, 551, 707, 760, 877, 1016, 1501
FalI	AAGNNNNNCTT	6 cut(s)	2056, 2088, 2085, 2117, 2797, 2829
FaqI	GGGAC	3 cut(s)	1544, 2223, 2384
FatI	CATG	8 cut(s)	18, 297, 547, 703, 756, 873, 1012, 1497
FbaI	TGATCA	3 cut(s)	499, 1033, 2791
FblI	GTMKAC	2 cut(s)	2396, 2499
Fnu4HI	GCNGC	8 cut(s)	183, 480, 1533, 1706, 1818, 2492, 2550, 2591
FokI	GGATG	6 cut(s)	46, 522, 857, 1203, 1702, 2765
FriOI	GRGCYC	1 cut(s)	378
Fsp4HI	GCNGC	8 cut(s)	183, 480, 1533, 1706, 1818, 2492, 2550, 2591
FspBI	CTAG	6 cut(s)	102, 380, 389, 933, 1727, 2769
FspI	TGCGCA	1 cut(s)	872
GlaI	GCGC	4 cut(s)	618, 872, 2594, 2749
GluI	GCNGC	8 cut(s)	183, 480, 1533, 1706, 1818, 2492, 2550, 2591
GsuI	CTGGAG	1 cut(s)	1290
HaeII	RGCGCY	1 cut(s)	620
HapII	CCGG	4 cut(s)	640, 2146, 2346, 2707
HgaI	GACGC	1 cut(s)	1798
HhaI	GCGC	4 cut(s)	619, 873, 2595, 2750
Hin1I	GRCGYC	2 cut(s)	617, 1809
Hin1II	CATG	8 cut(s)	22, 301, 551, 707, 760, 877, 1016, 1501
Hin6I	GCGC	4 cut(s)	617, 871, 2593, 2748
HinP1I	GCGC	4 cut(s)	617, 871, 2593, 2748
HincII	GTYRAC	4 cut(s)	538, 1074, 2176, 2500
HindII	GTYRAC	4 cut(s)	538, 1074, 2176, 2500
HindIII	AAGCTT	2 cut(s)	581, 2518
HpaII	CCGG	4 cut(s)	640, 2146, 2346, 2707
HphI	GGTGA	4 cut(s)	1595, 1649, 1663, 2329
Hpy188I	TCNGA	6 cut(s)	205, 690, 1113, 2409, 2419, 2811
HpyAV	CCTTC	6 cut(s)	840, 1255, 1419, 1588, 1831, 2680
HpyCH4IV	ACGT	4 cut(s)	940, 1453, 2172, 2645
HpyF10VI	GCNNNNNNNGC	7 cut(s)	170, 179, 344, 485, 1022, 2526, 2601
HpyF3I	CTNAG	6 cut(s)	588, 1077, 1112, 1611, 1781, 1981
HpySE526I	ACGT	4 cut(s)	940, 1453, 2172, 2645
Hsp92I	GRCGYC	2 cut(s)	617, 1809
Hsp92II	CATG	8 cut(s)	22, 301, 551, 707, 760, 877, 1016, 1501
HspAI	GCGC	4 cut(s)	617, 871, 2593, 2748
KasI	GGCGCC	1 cut(s)	616
Ksp22I	TGATCA	3 cut(s)	499, 1033, 2791
Kzo9I	GATC	9 cut(s)	205, 499, 1033, 1230, 1247, 2113, 2428, 2439, 2791
LmnI	GCTCC	5 cut(s)	381, 921, 1093, 1649, 2645
Lsp1109I	GCAGC	6 cut(s)	466, 1519, 1717, 2478, 2561, 2577
LweI	GCATC	6 cut(s)	133, 587, 657, 1096, 1125, 1748
MaeI	CTAG	6 cut(s)	102, 380, 389, 933, 1727, 2769
MaeII	ACGT	4 cut(s)	940, 1453, 2172, 2645
MaeIII	GTNAC	8 cut(s)	238, 340, 403, 1606, 1658, 1810, 1906, 2254
MalI	GATC	9 cut(s)	207, 501, 1035, 1232, 1249, 2115, 2430, 2441, 2793
MboI	GATC	9 cut(s)	205, 499, 1033, 1230, 1247, 2113, 2428, 2439, 2791
MboII	GAAGA	9 cut(s)	203, 317, 2064, 2105, 2222, 2702, 2730, 2793, 2793
MflI	RGATCY	2 cut(s)	2428, 2439
MhlI	GDGCHC	2 cut(s)	378, 1623
MlsI	TGGCCA	3 cut(s)	743, 1182, 1590
MluI	ACGCGT	1 cut(s)	2653
MluNI	TGGCCA	3 cut(s)	743, 1182, 1590
Mly113I	GGCGCC	1 cut(s)	617
MlyI	GAGTC	7 cut(s)	245, 692, 1069, 1452, 2181, 2189, 2366
MmeI	TCCRAC	3 cut(s)	1816, 2397, 2834
Mox20I	TGGCCA	3 cut(s)	743, 1182, 1590
MroXI	GAANNNNTTC	1 cut(s)	1048
MscI	TGGCCA	3 cut(s)	743, 1182, 1590
MseI	TTAA	7 cut(s)	666, 677, 806, 1020, 1122, 1161, 1746
MslI	CAYNNNNRTG	5 cut(s)	708, 1238, 1801, 2247, 2261
Msp20I	TGGCCA	3 cut(s)	743, 1182, 1590
MspA1I	CMGCKG	1 cut(s)	331
MspI	CCGG	4 cut(s)	640, 2146, 2346, 2707
MspR9I	CCNGG	3 cut(s)	641, 1377, 2146
Mva1269I	GAATGC	3 cut(s)	340, 973, 2279
MvaI	CCWGG	1 cut(s)	1377
MvnI	CGCG	3 cut(s)	1086, 2655, 2750
MwoI	GCNNNNNNNGC	7 cut(s)	170, 179, 344, 485, 1022, 2526, 2601
NarI	GGCGCC	1 cut(s)	617
NciI	CCSGG	2 cut(s)	641, 2146
NcoI	CCATGG	1 cut(s)	547
NdeII	GATC	9 cut(s)	205, 499, 1033, 1230, 1247, 2113, 2428, 2439, 2791
NlaIII	CATG	8 cut(s)	22, 301, 551, 707, 760, 877, 1016, 1501
NlaIV	GGNNCC	8 cut(s)	79, 226, 618, 1329, 1887, 2239, 2528, 2641
NmuCI	GTSAC	6 cut(s)	340, 1606, 1658, 1810, 1906, 2254
NsbI	TGCGCA	1 cut(s)	872
NspI	RCATGY	2 cut(s)	877, 1501
NspV	TTCGAA	1 cut(s)	735
OliI	CACNNNNGTG	2 cut(s)	1801, 2261
PceI	AGGCCT	1 cut(s)	2088
PciI	ACATGT	1 cut(s)	1497
PctI	GAATGC	3 cut(s)	340, 973, 2279
PdmI	GAANNNNTTC	1 cut(s)	1048
PfeI	GAWTC	4 cut(s)	632, 1064, 1718, 1912
PflMI	CCANNNNNTGG	1 cut(s)	792
PinAI	ACCGGT	1 cut(s)	2345
PkrI	GCNGC	8 cut(s)	184, 481, 1534, 1707, 1819, 2493, 2551, 2592
PleI	GAGTC	7 cut(s)	245, 691, 1069, 1451, 2181, 2188, 2366
PluTI	GGCGCC	1 cut(s)	620
PpsI	GAGTC	7 cut(s)	245, 691, 1069, 1451, 2181, 2188, 2366
PscI	ACATGT	1 cut(s)	1497
PshBI	ATTAAT	1 cut(s)	1020
PsiI	TTATAA	1 cut(s)	2015
Psp124BI	GAGCTC	1 cut(s)	378
Psp1406I	AACGTT	1 cut(s)	2172
Psp6I	CCWGG	1 cut(s)	1375
PspGI	CCWGG	1 cut(s)	1375
PspN4I	GGNNCC	8 cut(s)	79, 226, 618, 1329, 1887, 2239, 2528, 2641
PspPI	GGNCC	9 cut(s)	274, 326, 625, 953, 1275, 1886, 2237, 2389, 2527
PstI	CTGCAG	1 cut(s)	2263
PsuI	RGATCY	2 cut(s)	2428, 2439
RsaI	GTAC	5 cut(s)	660, 878, 943, 1361, 1511
RsaNI	GTAC	5 cut(s)	659, 877, 942, 1360, 1510
RseI	CAYNNNNRTG	5 cut(s)	708, 1238, 1801, 2247, 2261
SacI	GAGCTC	1 cut(s)	378
SalI	GTCGAC	1 cut(s)	2498
SaqAI	TTAA	7 cut(s)	666, 677, 806, 1020, 1122, 1161, 1746
SatI	GCNGC	8 cut(s)	183, 480, 1533, 1706, 1818, 2492, 2550, 2591
Sau3AI	GATC	9 cut(s)	205, 499, 1033, 1230, 1247, 2113, 2428, 2439, 2791
Sau96I	GGNCC	9 cut(s)	274, 326, 625, 953, 1275, 1886, 2237, 2389, 2527
SchI	GAGTC	7 cut(s)	245, 692, 1069, 1452, 2181, 2189, 2366
ScrFI	CCNGG	3 cut(s)	641, 1377, 2146
SduI	GDGCHC	2 cut(s)	378, 1623
SfaNI	GCATC	6 cut(s)	133, 587, 657, 1096, 1125, 1748
SfcI	CTRYAG	2 cut(s)	55, 2259
SfoI	GGCGCC	1 cut(s)	618
SfuI	TTCGAA	1 cut(s)	735
SinI	GGWCC	5 cut(s)	326, 625, 1275, 2237, 2389
SmiMI	CAYNNNNRTG	5 cut(s)	708, 1238, 1801, 2247, 2261
SmlI	CTYRAG	3 cut(s)	1432, 1447, 2023
SmoI	CTYRAG	3 cut(s)	1432, 1447, 2023
SpeI	ACTAGT	1 cut(s)	932
SseBI	AGGCCT	1 cut(s)	2088
SsiI	CCGC	8 cut(s)	183, 329, 1086, 1694, 1818, 2384, 2649, 2750
SspDI	GGCGCC	1 cut(s)	616
SspMI	CTAG	6 cut(s)	102, 380, 389, 933, 1727, 2769
SstI	GAGCTC	1 cut(s)	378
StuI	AGGCCT	1 cut(s)	2088
StyD4I	CCNGG	3 cut(s)	639, 1375, 2144
StyI	CCWWGG	2 cut(s)	547, 1769
TaiI	ACGT	4 cut(s)	943, 1456, 2175, 2648
TaqI	TCGA	9 cut(s)	141, 189, 735, 1644, 1716, 1931, 2499, 2711, 2774
TaqII	GACCGA	1 cut(s)	1964
TatI	WGTACW	2 cut(s)	658, 876
TauI	GCSGC	2 cut(s)	185, 1820
TfiI	GAWTC	4 cut(s)	632, 1064, 1718, 1912
Tru1I	TTAA	7 cut(s)	666, 677, 806, 1020, 1122, 1161, 1746
Tru9I	TTAA	7 cut(s)	666, 677, 806, 1020, 1122, 1161, 1746
TscAI	CASTG	9 cut(s)	268, 658, 1510, 1615, 2038, 2064, 2263, 2268, 2323
TseFI	GTSAC	6 cut(s)	340, 1606, 1658, 1810, 1906, 2254
TseI	GCWGC	6 cut(s)	479, 1532, 1705, 2491, 2549, 2590
Tsp45I	GTSAC	6 cut(s)	340, 1606, 1658, 1810, 1906, 2254
TspGWI	ACGGA	2 cut(s)	522, 1437
TspRI	CASTG	9 cut(s)	268, 658, 1510, 1615, 2038, 2064, 2263, 2268, 2323
Van91I	CCANNNNNTGG	1 cut(s)	792
VneI	GTGCAC	1 cut(s)	1619
VpaK11BI	GGWCC	5 cut(s)	326, 625, 1275, 2237, 2389
VspI	ATTAAT	1 cut(s)	1020
XapI	RAATTY	7 cut(s)	199, 905, 1469, 1640, 1759, 1877, 2312
XceI	RCATGY	2 cut(s)	877, 1501
XcmI	CCANNNNNNNNNTGG	1 cut(s)	554
XmiI	GTMKAC	2 cut(s)	2396, 2499
XmnI	GAANNNNTTC	1 cut(s)	1048
XspI	CTAG	6 cut(s)	102, 380, 389, 933, 1727, 2769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.