Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002701

Physical Location & Seq

Genomic Coordinates Reverse (-)

18731100 .. 18735913

Gene Structure 4814 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1229200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2841 bp

ATGGTTGAACAGTTAGCCATGAGTATAGTTTGGCTCCTGGTTTTGATGATTTTCTGTAATGGGTTGGCCTCAAATGGTGCCAGCACTACCAATGTCTCCACTAGACCAGATGTTGTAAATCTCGGGGCAATTTTCTCTTTCGACACCATTATTGGCAAAGTTGCCAAAGTGGCAATAGAAGCCGCAGTCAAAGATGTGAATTCTGATCCATCTGTTCTTGGTGGCACCAAGATGATTGTTACAATGCAGGACTCAAATTACAGTGGGCTTCTGGGCATTATTGAAGCCTTACGGTTTATGGAGAAAGACACAATAGCGATAATTGGACCGCAGAATGCTGTCACCGCTCATGTAATATCTCATATTGCAAATGAGCTCCAAGTTCCTCTAGTATCATTTTCGGTAACAGACCCCACCCTGTCAGCACTTCAGTTCCCATTCTTTGTTAGAAGTACCCAAAATGACCTTTATCAGATGGCTGCGATAGCAGAAATGGTTGATTACTACGGATGGAGAGAGGTTATTGCACTCTATGTTGACGATGACCATGGGAGAAACGGGATTACTGCATTAGCAAATATGCTTGCTGAGAAACGATGTAAGATATCATACAAGGCGCCATTGGTCCTTGATTCTAATCGGGATAACATCACTGATGTTCTGGTTAAAGTGGCTTTAACAGAGTCTCGGATTATTGTTCTTCATGCTTATGGCAGTTGGGGTCCTCTGGTTTTCGATGTGGCCAAGTATCTTGGCATGATGGGAACTGGATATGTCTGGATAGCTACTAGTTGGCTTTCTACTTTAATAGATACCGCCTCTCCCCTCCCTTCAGGTATGATGGATGATATGCAGGGAGTTCTAACGCTGCGCATGTACACGCCAGAGACAGAACTGAAAAGAAAATTTGTTTCAAGGTGGAGCAACTTGACTAGTGGACAGACATCTAAAGGCCCAATTGGGTTGAATGCTTATGGTCTTTATGCCTACGATACTGTGTGGTTGCTTGCTCGTGCAATCGATGCCTTTTTTGATCAAGGGGGAACTCTTTCATTCTCGAATGATTCACGGTTGACTCAGCTTCGCGGAGGGGATCTGAATCTTGATGCTATGAGCATCTTTAATGGAGGCAATCTGTTAATGAAAAACATTTTGCAGGTTAATATGACTGGTGTATCTGGCCCGATGAAGTTTACTCCAAAAAAGGACCTCATTCGTCCTGCGTTTGAGGTCATAAATGTGATTGGAACGGGGATTAGGACGATTGGTTATTGGTCCAATTTTTCGGGATTATCAGTTGTACGTCCAGAAACACTTTACACAAAGCCACCAAATCATTCCAATTCAAGTGATAAACTGTACAGTGTAATTTGGCCTGGACAAACAACACAGAAGCCTCGTGGTTGGGTGTTTCCAAACAACGGAAGGCACTTGAGGATTGGAGTCCCAAAACGTGTTAGTTTTCGTGAATTTGTTTCATACACAGAAGGCAATGACATGTTCACAGGATACTCCATTGATGTTTTTACTGCTGCATTGAACTTGTTGCCCTATGCTGTTCCATACAAACTGATTCCCTTTGGTGATGGCCATAAGAATCCAAGTGTCACTGAGCTTGTGCACAAAATCCAAACGGGTGAATACGATGGAGCAATAGGTGACATTGCAATCATCACCAACCGAACAAGGATGGCGGATTTTACCCAGCCATATATCGAATCTGGGCTAGTAGTAGTTGCACCTGTTACACCAACATTGAATTCAAATCCTTGGGCTTTCCTGAGGCCATTCAATCCCATGATGTGGGGTGTGACGGCCGCCTTCTTTCTCATTGTTGGAACAGCTGTTTGGATTTTAGAGCACAGGCATAATGATGATTTTCGGGGGGCTCCTAAAAAACAATTTGTCACTATTCTGTGGTTTAGCTTTTCGACTTGGTTCTTTGCGCACAGAGAAAATACAGTCAGCACCCTTGGTCGCTTAGTGCTAATAGTATGGCTGTTCGTTGTTCTTATAATCAACTCAAGCTACACTGCAAGTTTGACCTCAATCCTTACCGTGCAACAGCTTTCTTCCTCCATCAAAGGCATTCACGCTTTGCTTTCAAGCAACGCTCCCATTGGCTACCAGCAAGGTTCATTTGCCCGGAATTATCTAGTTGACGAACTCAATGTTGACGAGTCCAGACTCGTTCCTCTTATCATGCCAGACGACTATGCCAAAGCCTTGAAAGCTGGTCCCCATAAAGGTGGTGTTGCTGCAGTGATTGACGAGCGTGCTTACATAGAACTTTTCCTCTCGAGCAGATGTGATTTCAGTGTTGTAGGTCAAGAATTCACCAAAACCGGTTGGGGATTTGCTTTTGCAAGGGACTCGCCTTTAGCGGTGGACCTGTCTACTGCACTTTTGAAGCTGTCGGAGAACGGGGATCTACAAAGGATCCATGATAAATGGCTTATGAGAACTCCTTGTGCCTCACAAGGCGCAAAGCTGCAAGTCGATAGGCTTCAACTCAAAAGCTTCTGGGGACTCTTTGTTATCTGTGGTGCAGCTTGCTTCCTTGCACTCGCTATATATTTCTGCATGATGCTGCACCAGTTCAGCAAGCACAACACTGATGAACTGATCACTACTGGTAGCTCCAGGTCCACACGCGTTCAAACGTTTCTCACATTTGTTGATGAGAAGGAAGAGGAAGTGAAAAGCCGGTCGAAAAGAAGACAAATGGAGAGGACTTCAAATAGAAGCGCGAGCGAAGATGAATCGATGTATAACTCAAAAAGAAGACACCTTGATCAATCACCGTCAAGTGTGAGTAATGTTAATAGTAATCATGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

947

Amino Acids

104.97

Weight (kDa)

7.99

Isoelectric Point (pI)

35.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	50 - 348	5.3e-15	Periplasmic binding protein
ANF_receptor	PF01094	56 - 416	3e-87	Receptor family ligand binding region
SBP_bac_3	PF00497	493 - 819	1.1e-09	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	494 - 580	1.3e-06	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	601 - 852	4.1e-34	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0002701)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191
malus_domestica	MD02G1114100.v1.1 MD15G1229200.v1.1
prunus_persica	Prupe.7G106900_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1
pyrus_communis	pycom02g08900
rosa_chinensis	RchiOBHm_Chr2g0096991
rosa_laevigata	RLG00000016690
rosa_multiflora	Rmu_co8480363.1_g000001 Rmu_sc0005782.1_g000006
rosa_roxburghii	Rroxscaffold_2G00145100
rosa_rugosa	Rorug02G0062600 Rorug02G0062700
rosa_samantha	Rh2AG110500 Rh2BG112300 Rh2CG114400 Rh2DG113600
rosa_wichuraiana	Rw2G008550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2015
Acc16I	TGCGCA	2 cut(s)	872, 1947
Acc36I	ACCTGC	1 cut(s)	1147
AccB1I	GGYRCC	3 cut(s)	77, 224, 616
AccB7I	CCANNNNNTGG	1 cut(s)	1803
AccBSI	CCGCTC	1 cut(s)	347
AccI	GTMKAC	1 cut(s)	2396
AccII	CGCG	3 cut(s)	1086, 2655, 2750
AciI	CCGC	8 cut(s)	183, 329, 345, 816, 1086, 1694, 1818, 2384
AclI	AACGTT	1 cut(s)	2663
AclWI	GGATC	5 cut(s)	200, 1101, 2434, 2436, 2447
AcoI	YGGCCR	3 cut(s)	741, 1588, 1815
AcsI	RAATTY	5 cut(s)	199, 905, 1469, 1759, 2333
AcuI	CTGAAG	2 cut(s)	413, 816
AcyI	GRCGYC	1 cut(s)	617
AfaI	GTAC	4 cut(s)	454, 878, 1302, 1361
AfiI	CCNNNNNNNGG	3 cut(s)	1421, 1803, 2246
AflIII	ACRYGT	3 cut(s)	1453, 1497, 2653
AgeI	ACCGGT	1 cut(s)	2345
AhlI	ACTAGT	2 cut(s)	788, 932
AjnI	CCWGG	3 cut(s)	36, 1375, 2642
AjuI	GAANNNNNNNTTGG	4 cut(s)	1744, 1776, 1831, 1863
Alw21I	GWGCWC	3 cut(s)	378, 1623, 1863
Alw26I	GTCTC	3 cut(s)	100, 690, 881
Alw44I	GTGCAC	1 cut(s)	1619
AlwI	GGATC	5 cut(s)	200, 1101, 2434, 2436, 2447
Ama87I	CYCGRG	2 cut(s)	122, 2299
AoxI	GGCC	8 cut(s)	66, 741, 952, 1180, 1373, 1588, 1784, 1815
ApaLI	GTGCAC	1 cut(s)	1619
ApeKI	GCWGC	7 cut(s)	479, 868, 1532, 2258, 2491, 2549, 2590
ApoI	RAATTY	5 cut(s)	199, 905, 1469, 1759, 2333
AsiGI	ACCGGT	1 cut(s)	2345
Asp700I	GAANNNNTTC	1 cut(s)	1048
AspLEI	GCGC	5 cut(s)	619, 873, 1948, 2486, 2750
AsuC2I	CCSGG	1 cut(s)	2146
AsuHPI	GGTGA	7 cut(s)	334, 1595, 1649, 1666, 1670, 2329, 2793
AvaI	CYCGRG	2 cut(s)	122, 2299
AvaII	GGWCC	8 cut(s)	326, 625, 722, 1207, 1275, 2237, 2389, 2646
AxyI	CCTNAGG	1 cut(s)	1781
BaeGI	GKGCMC	1 cut(s)	1623
BaeI	ACNNNNGTAYC	2 cut(s)	1158, 1191
BalI	TGGCCA	2 cut(s)	743, 1590
BamHI	GGATCC	1 cut(s)	2439
BanI	GGYRCC	3 cut(s)	77, 224, 616
BanII	GRGCYC	2 cut(s)	378, 1891
BauI	CACGAG	2 cut(s)	1011, 1398
BbsI	GAAGAC	2 cut(s)	2725, 2791
Bbv12I	GWGCWC	3 cut(s)	378, 1623, 1863
BbvI	GCAGC	7 cut(s)	466, 855, 1519, 2245, 2478, 2561, 2577
BccI	CCATC	9 cut(s)	217, 469, 504, 754, 835, 1580, 1640, 1684, 2087
BceAI	ACGGC	1 cut(s)	1830
BcgI	CGANNNNNNTGC	2 cut(s)	2355, 2389
BciT130I	CCWGG	3 cut(s)	38, 1377, 2644
BciVI	GTATCC	1 cut(s)	1502
BclI	TGATCA	3 cut(s)	1033, 2625, 2794
BcnI	CCSGG	1 cut(s)	2146
BcoDI	GTCTC	3 cut(s)	100, 690, 881
BcuI	ACTAGT	2 cut(s)	788, 932
BfaI	CTAG	6 cut(s)	102, 389, 789, 933, 1727, 2156
BfmI	CTRYAG	1 cut(s)	2259
BfoI	RGCGCY	1 cut(s)	620
BfuAI	ACCTGC	1 cut(s)	1147
BfuI	GTATCC	1 cut(s)	1502
BglI	GCCNNNNNGGC	1 cut(s)	170
BisI	GCNGC	9 cut(s)	183, 480, 869, 1533, 1818, 2259, 2492, 2550, 2591
BlsI	GCNGC	9 cut(s)	184, 481, 870, 1534, 1819, 2260, 2493, 2551, 2592
Bme1390I	CCNGG	4 cut(s)	38, 1377, 2146, 2644
Bme18I	GGWCC	8 cut(s)	326, 625, 722, 1207, 1275, 2237, 2389, 2646
BmeT110I	CYCGRG	2 cut(s)	122, 2299
BmiI	GGNNCC	8 cut(s)	35, 79, 226, 618, 723, 1890, 2239, 2441
BmrFI	CCNGG	4 cut(s)	38, 1377, 2146, 2644
BmsI	GCATC	4 cut(s)	1012, 1096, 1125, 2577
BpiI	GAAGAC	2 cut(s)	2725, 2791
BpmI	CTGGAG	1 cut(s)	2626
BpuEI	CTTGAG	2 cut(s)	1453, 2008
BpuMI	CCSGG	1 cut(s)	2146
Bsa29I	ATCGAT	2 cut(s)	1020, 2765
BsaBI	GATNNNNATC	2 cut(s)	636, 1098
BsaHI	GRCGYC	1 cut(s)	617
BsaJI	CCNNGG	3 cut(s)	547, 1769, 1972
BsaWI	WCCGGW	1 cut(s)	2345
BsaXI	ACNNNNNCTCC	2 cut(s)	805, 835
Bsc4I	CCNNNNNNNGG	3 cut(s)	1421, 1803, 2246
Bse118I	RCCGGY	2 cut(s)	2345, 2706
Bse1I	ACTGG	4 cut(s)	772, 1174, 2596, 2638
Bse21I	CCTNAGG	1 cut(s)	1781
Bse3DI	GCAATG	2 cut(s)	1498, 1662
Bse8I	GATNNNNATC	2 cut(s)	636, 1098
BseBI	CCWGG	3 cut(s)	38, 1377, 2644
BseCI	ATCGAT	2 cut(s)	1020, 2765
BseDI	CCNNGG	3 cut(s)	547, 1769, 1972
BseGI	GGATG	3 cut(s)	515, 850, 1695
BseJI	GATNNNNATC	2 cut(s)	636, 1098
BseLI	CCNNNNNNNGG	3 cut(s)	1421, 1803, 2246
BseMI	GCAATG	2 cut(s)	1498, 1662
BseMII	CTCAG	4 cut(s)	579, 1091, 1602, 1772
BseNI	ACTGG	4 cut(s)	772, 1174, 2596, 2638
BseSI	GKGCMC	1 cut(s)	1623
BseX3I	CGGCCG	1 cut(s)	1815
BseXI	GCAGC	7 cut(s)	466, 855, 1519, 2245, 2478, 2561, 2577
BseYI	CCCAGC	1 cut(s)	1704
BsgI	GTGCAG	3 cut(s)	2385, 2568, 2576
Bsh1236I	CGCG	3 cut(s)	1086, 2655, 2750
Bsh1285I	CGRYCG	2 cut(s)	1818, 2711
BshFI	GGCC	8 cut(s)	68, 743, 954, 1182, 1375, 1590, 1786, 1817
BshNI	GGYRCC	3 cut(s)	77, 224, 616
BshTI	ACCGGT	1 cut(s)	2345
BshVI	ATCGAT	2 cut(s)	1020, 2765
BsiEI	CGRYCG	2 cut(s)	1818, 2711
BsiHKAI	GWGCWC	3 cut(s)	378, 1623, 1863
BsiHKCI	CYCGRG	2 cut(s)	122, 2299
BsiSI	CCGG	3 cut(s)	2146, 2346, 2707
BslFI	GGGAC	4 cut(s)	1430, 2223, 2384, 2541
BslI	CCNNNNNNNGG	3 cut(s)	1421, 1803, 2246
BsmAI	GTCTC	3 cut(s)	100, 690, 881
BsmFI	GGGAC	4 cut(s)	1430, 2223, 2384, 2541
BsmI	GAATGC	3 cut(s)	340, 973, 2088
BsnI	GGCC	8 cut(s)	68, 743, 954, 1182, 1375, 1590, 1786, 1817
BsoBI	CYCGRG	2 cut(s)	122, 2299
Bsp1286I	GDGCHC	4 cut(s)	378, 1623, 1863, 1891
Bsp1407I	TGTACA	2 cut(s)	876, 1359
Bsp143I	GATC	7 cut(s)	205, 1033, 1093, 2428, 2439, 2625, 2794
Bsp19I	CCATGG	1 cut(s)	547
BspACI	CCGC	8 cut(s)	183, 329, 345, 816, 1086, 1694, 1818, 2384
BspANI	GGCC	8 cut(s)	68, 743, 954, 1182, 1375, 1590, 1786, 1817
BspCNI	CTCAG	4 cut(s)	580, 1090, 1603, 1773
BspDI	ATCGAT	2 cut(s)	1020, 2765
BspFNI	CGCG	3 cut(s)	1086, 2655, 2750
BspLI	GGNNCC	8 cut(s)	35, 79, 226, 618, 723, 1890, 2239, 2441
BspMAI	CTGCAG	1 cut(s)	2263
BspMI	ACCTGC	1 cut(s)	1147
BspPI	GGATC	5 cut(s)	200, 1101, 2434, 2436, 2447
BspT107I	GGYRCC	3 cut(s)	77, 224, 616
BsrBI	CCGCTC	1 cut(s)	347
BsrDI	GCAATG	2 cut(s)	1498, 1662
BsrFI	RCCGGY	2 cut(s)	2345, 2706
BsrGI	TGTACA	2 cut(s)	876, 1359
BsrI	ACTGG	4 cut(s)	772, 1174, 2596, 2638
BssAI	RCCGGY	2 cut(s)	2345, 2706
BssECI	CCNNGG	3 cut(s)	547, 1769, 1972
BssMI	GATC	7 cut(s)	205, 1033, 1093, 2428, 2439, 2625, 2794
BssNI	GRCGYC	1 cut(s)	617
BssSI	CACGAG	2 cut(s)	1011, 1398
BssT1I	CCWWGG	3 cut(s)	547, 1769, 1972
Bst2BI	CACGAG	2 cut(s)	1011, 1398
Bst2UI	CCWGG	3 cut(s)	38, 1377, 2644
Bst6I	CTCTTC	1 cut(s)	2685
BstACI	GRCGYC	1 cut(s)	617
BstAPI	GCANNNNNTGC	1 cut(s)	1022
BstAUI	TGTACA	2 cut(s)	876, 1359
BstC8I	GCNNGC	7 cut(s)	82, 585, 1008, 2277, 2554, 2606, 2752
BstDEI	CTNAG	5 cut(s)	588, 1077, 1611, 1781, 1981
BstDSI	CCRYGG	1 cut(s)	547
BstF5I	GGATG	3 cut(s)	515, 850, 1695
BstFNI	CGCG	3 cut(s)	1086, 2655, 2750
BstH2I	RGCGCY	1 cut(s)	620
BstHHI	GCGC	5 cut(s)	619, 873, 1948, 2486, 2750
BstKTI	GATC	7 cut(s)	208, 1036, 1096, 2431, 2442, 2628, 2797
BstMAI	GTCTC	3 cut(s)	100, 690, 881
BstMBI	GATC	7 cut(s)	205, 1033, 1093, 2428, 2439, 2625, 2794
BstMCI	CGRYCG	2 cut(s)	1818, 2711
BstMWI	GCNNNNNNNGC	6 cut(s)	170, 179, 344, 485, 1022, 2231
BstNI	CCWGG	3 cut(s)	38, 1377, 2644
BstNSI	RCATGY	2 cut(s)	877, 1501
BstSCI	CCNGG	4 cut(s)	36, 1375, 2144, 2642
BstSFI	CTRYAG	1 cut(s)	2259
BstSLI	GKGCMC	1 cut(s)	1623
BstUI	CGCG	3 cut(s)	1086, 2655, 2750
BstV1I	GCAGC	7 cut(s)	466, 855, 1519, 2245, 2478, 2561, 2577
BstV2I	GAAGAC	2 cut(s)	2725, 2791
BstX2I	RGATCY	3 cut(s)	1093, 2428, 2439
BstXI	CCANNNNNNTGG	1 cut(s)	2249
BstYI	RGATCY	3 cut(s)	1093, 2428, 2439
BstZI	CGGCCG	1 cut(s)	1815
Bsu15I	ATCGAT	2 cut(s)	1020, 2765
Bsu36I	CCTNAGG	1 cut(s)	1781
BsuI	GTATCC	1 cut(s)	1502
BsuRI	GGCC	8 cut(s)	68, 743, 954, 1182, 1375, 1590, 1786, 1817
BsuTUI	ATCGAT	2 cut(s)	1020, 2765
BtgI	CCRYGG	1 cut(s)	547
BtsCI	GGATG	3 cut(s)	515, 850, 1695
BtsI	GCAGTG	2 cut(s)	2031, 2268
BtsIMutI	CAGTG	8 cut(s)	268, 651, 1369, 1608, 2031, 2268, 2323, 2613
BveI	ACCTGC	1 cut(s)	1147
Cac8I	GCNNGC	7 cut(s)	82, 585, 1008, 2277, 2554, 2606, 2752
CfoI	GCGC	5 cut(s)	619, 873, 1948, 2486, 2750
Cfr10I	RCCGGY	2 cut(s)	2345, 2706
ClaI	ATCGAT	2 cut(s)	1020, 2765
Csp6I	GTAC	4 cut(s)	453, 877, 1301, 1360
CspAI	ACCGGT	1 cut(s)	2345
CviQI	GTAC	4 cut(s)	453, 877, 1301, 1360
DdeI	CTNAG	5 cut(s)	588, 1077, 1611, 1781, 1981
DinI	GGCGCC	1 cut(s)	618
DpnI	GATC	7 cut(s)	207, 1035, 1095, 2430, 2441, 2627, 2796
DpnII	GATC	7 cut(s)	205, 1033, 1093, 2428, 2439, 2625, 2794
EaeI	YGGCCR	3 cut(s)	741, 1588, 1815
EagI	CGGCCG	1 cut(s)	1815
Eam1104I	CTCTTC	1 cut(s)	2685
EarI	CTCTTC	1 cut(s)	2685
EciI	GGCGGA	1 cut(s)	1709
Ecl136II	GAGCTC	1 cut(s)	376
EclXI	CGGCCG	1 cut(s)	1815
Eco130I	CCWWGG	3 cut(s)	547, 1769, 1972
Eco24I	GRGCYC	2 cut(s)	378, 1891
Eco32I	GATATC	1 cut(s)	606
Eco47I	GGWCC	8 cut(s)	326, 625, 722, 1207, 1275, 2237, 2389, 2646
Eco52I	CGGCCG	1 cut(s)	1815
Eco53kI	GAGCTC	1 cut(s)	376
Eco57I	CTGAAG	2 cut(s)	413, 816
Eco81I	CCTNAGG	1 cut(s)	1781
Eco88I	CYCGRG	2 cut(s)	122, 2299
EcoICRI	GAGCTC	1 cut(s)	376
EcoO109I	RGGNCCY	2 cut(s)	722, 1207
EcoRI	GAATTC	3 cut(s)	199, 1759, 2333
EcoRII	CCWGG	3 cut(s)	36, 1375, 2642
EcoRV	GATATC	1 cut(s)	606
EcoT14I	CCWWGG	3 cut(s)	547, 1769, 1972
EcoT38I	GRGCYC	2 cut(s)	378, 1891
EgeI	GGCGCC	1 cut(s)	618
EheI	GGCGCC	1 cut(s)	618
ErhI	CCWWGG	3 cut(s)	547, 1769, 1972
FaqI	GGGAC	4 cut(s)	1430, 2223, 2384, 2541
FbaI	TGATCA	3 cut(s)	1033, 2625, 2794
FblI	GTMKAC	1 cut(s)	2396
Fnu4HI	GCNGC	9 cut(s)	183, 480, 869, 1533, 1818, 2259, 2492, 2550, 2591
FokI	GGATG	3 cut(s)	522, 857, 1702
FriOI	GRGCYC	2 cut(s)	378, 1891
Fsp4HI	GCNGC	9 cut(s)	183, 480, 869, 1533, 1818, 2259, 2492, 2550, 2591
FspBI	CTAG	6 cut(s)	102, 389, 789, 933, 1727, 2156
FspI	TGCGCA	2 cut(s)	872, 1947
GlaI	GCGC	5 cut(s)	618, 872, 1947, 2485, 2749
GluI	GCNGC	9 cut(s)	183, 480, 869, 1533, 1818, 2259, 2492, 2550, 2591
GsaI	CCCAGC	1 cut(s)	1708
GsuI	CTGGAG	1 cut(s)	2626
HaeII	RGCGCY	1 cut(s)	620
HaeIII	GGCC	8 cut(s)	68, 743, 954, 1182, 1375, 1590, 1786, 1817
HapII	CCGG	3 cut(s)	2146, 2346, 2707
HhaI	GCGC	5 cut(s)	619, 873, 1948, 2486, 2750
Hin1I	GRCGYC	1 cut(s)	617
Hin6I	GCGC	5 cut(s)	617, 871, 1946, 2484, 2748
HinP1I	GCGC	5 cut(s)	617, 871, 1946, 2484, 2748
HincII	GTYRAC	4 cut(s)	538, 1074, 2161, 2176
HindII	GTYRAC	4 cut(s)	538, 1074, 2161, 2176
HindIII	AAGCTT	1 cut(s)	2518
HpaII	CCGG	3 cut(s)	2146, 2346, 2707
HphI	GGTGA	7 cut(s)	334, 1595, 1649, 1666, 1670, 2329, 2793
Hpy188I	TCNGA	5 cut(s)	205, 474, 690, 1098, 2419
HpyAV	CCTTC	5 cut(s)	840, 1419, 1481, 1831, 2680
HpyCH4IV	ACGT	3 cut(s)	1303, 1453, 2663
HpyF10VI	GCNNNNNNNGC	6 cut(s)	170, 179, 344, 485, 1022, 2231
HpyF3I	CTNAG	5 cut(s)	588, 1077, 1611, 1781, 1981
HpySE526I	ACGT	3 cut(s)	1303, 1453, 2663
Hsp92I	GRCGYC	1 cut(s)	617
HspAI	GCGC	5 cut(s)	617, 871, 1946, 2484, 2748
KasI	GGCGCC	1 cut(s)	616
Ksp22I	TGATCA	3 cut(s)	1033, 2625, 2794
Kzo9I	GATC	7 cut(s)	205, 1033, 1093, 2428, 2439, 2625, 2794
LmnI	GCTCC	7 cut(s)	39, 381, 921, 1649, 1894, 2119, 2645
Lsp1109I	GCAGC	7 cut(s)	466, 855, 1519, 2245, 2478, 2561, 2577
LweI	GCATC	4 cut(s)	1012, 1096, 1125, 2577
MaeI	CTAG	6 cut(s)	102, 389, 789, 933, 1727, 2156
MaeII	ACGT	3 cut(s)	1303, 1453, 2663
MaeIII	GTNAC	8 cut(s)	238, 340, 403, 1606, 1658, 1744, 1810, 1906
MalI	GATC	7 cut(s)	207, 1035, 1095, 2430, 2441, 2627, 2796
MbiI	CCGCTC	1 cut(s)	347
MboI	GATC	7 cut(s)	205, 1033, 1093, 2428, 2439, 2625, 2794
MboII	GAAGA	6 cut(s)	692, 2064, 2702, 2730, 2768, 2796
MfeI	CAATTG	1 cut(s)	957
MflI	RGATCY	3 cut(s)	1093, 2428, 2439
MhlI	GDGCHC	4 cut(s)	378, 1623, 1863, 1891
MlsI	TGGCCA	2 cut(s)	743, 1590
MluI	ACGCGT	1 cut(s)	2653
MluNI	TGGCCA	2 cut(s)	743, 1590
Mly113I	GGCGCC	1 cut(s)	617
MlyI	GAGTC	8 cut(s)	245, 692, 1069, 1452, 2181, 2189, 2366, 2523
MmeI	TCCRAC	2 cut(s)	1816, 2397
Mox20I	TGGCCA	2 cut(s)	743, 1590
MroXI	GAANNNNTTC	1 cut(s)	1048
MscI	TGGCCA	2 cut(s)	743, 1590
MseI	TTAA	7 cut(s)	666, 677, 806, 1122, 1139, 1161, 2823
MslI	CAYNNNNRTG	5 cut(s)	230, 708, 1238, 1872, 2247
Msp20I	TGGCCA	2 cut(s)	743, 1590
MspA1I	CMGCKG	1 cut(s)	1844
MspI	CCGG	3 cut(s)	2146, 2346, 2707
MspR9I	CCNGG	4 cut(s)	38, 1377, 2146, 2644
MunI	CAATTG	1 cut(s)	957
Mva1269I	GAATGC	3 cut(s)	340, 973, 2088
MvaI	CCWGG	3 cut(s)	38, 1377, 2644
MvnI	CGCG	3 cut(s)	1086, 2655, 2750
MwoI	GCNNNNNNNGC	6 cut(s)	170, 179, 344, 485, 1022, 2231
NarI	GGCGCC	1 cut(s)	617
NciI	CCSGG	1 cut(s)	2146
NcoI	CCATGG	1 cut(s)	547
NdeII	GATC	7 cut(s)	205, 1033, 1093, 2428, 2439, 2625, 2794
NlaIV	GGNNCC	8 cut(s)	35, 79, 226, 618, 723, 1890, 2239, 2441
NmuCI	GTSAC	5 cut(s)	340, 1606, 1658, 1810, 1906
NsbI	TGCGCA	2 cut(s)	872, 1947
NspI	RCATGY	2 cut(s)	877, 1501
PaeR7I	CTCGAG	1 cut(s)	2299
PciI	ACATGT	1 cut(s)	1497
PctI	GAATGC	3 cut(s)	340, 973, 2088
PdmI	GAANNNNTTC	1 cut(s)	1048
PfeI	GAWTC	7 cut(s)	632, 1064, 1099, 1573, 1597, 1718, 2762
PflMI	CCANNNNNTGG	1 cut(s)	1803
PinAI	ACCGGT	1 cut(s)	2345
PkrI	GCNGC	9 cut(s)	184, 481, 870, 1534, 1819, 2260, 2493, 2551, 2592
PleI	GAGTC	8 cut(s)	245, 691, 1069, 1451, 2181, 2188, 2366, 2523
PluTI	GGCGCC	1 cut(s)	620
PpsI	GAGTC	8 cut(s)	245, 691, 1069, 1451, 2181, 2188, 2366, 2523
PpuMI	RGGWCCY	2 cut(s)	722, 1207
PscI	ACATGT	1 cut(s)	1497
PsiI	TTATAA	1 cut(s)	2015
Psp124BI	GAGCTC	1 cut(s)	378
Psp1406I	AACGTT	1 cut(s)	2663
Psp5II	RGGWCCY	2 cut(s)	722, 1207
Psp6I	CCWGG	3 cut(s)	36, 1375, 2642
PspFI	CCCAGC	1 cut(s)	1704
PspGI	CCWGG	3 cut(s)	36, 1375, 2642
PspN4I	GGNNCC	8 cut(s)	35, 79, 226, 618, 723, 1890, 2239, 2441
PspPPI	RGGWCCY	2 cut(s)	722, 1207
PstI	CTGCAG	1 cut(s)	2263
PsuI	RGATCY	3 cut(s)	1093, 2428, 2439
PvuII	CAGCTG	1 cut(s)	1844
RsaI	GTAC	4 cut(s)	454, 878, 1302, 1361
RsaNI	GTAC	4 cut(s)	453, 877, 1301, 1360
RseI	CAYNNNNRTG	5 cut(s)	230, 708, 1238, 1872, 2247
SacI	GAGCTC	1 cut(s)	378
SaqAI	TTAA	7 cut(s)	666, 677, 806, 1122, 1139, 1161, 2823
SatI	GCNGC	9 cut(s)	183, 480, 869, 1533, 1818, 2259, 2492, 2550, 2591
Sau3AI	GATC	7 cut(s)	205, 1033, 1093, 2428, 2439, 2625, 2794
SchI	GAGTC	8 cut(s)	245, 692, 1069, 1452, 2181, 2189, 2366, 2523
ScrFI	CCNGG	4 cut(s)	38, 1377, 2146, 2644
SduI	GDGCHC	4 cut(s)	378, 1623, 1863, 1891
SfaNI	GCATC	4 cut(s)	1012, 1096, 1125, 2577
SfcI	CTRYAG	1 cut(s)	2259
SfoI	GGCGCC	1 cut(s)	618
Sfr274I	CTCGAG	1 cut(s)	2299
SinI	GGWCC	8 cut(s)	326, 625, 722, 1207, 1275, 2237, 2389, 2646
SlaI	CTCGAG	1 cut(s)	2299
SmiMI	CAYNNNNRTG	5 cut(s)	230, 708, 1238, 1872, 2247
SmlI	CTYRAG	3 cut(s)	1432, 2023, 2299
SmoI	CTYRAG	3 cut(s)	1432, 2023, 2299
SpeI	ACTAGT	2 cut(s)	788, 932
SsiI	CCGC	8 cut(s)	183, 329, 345, 816, 1086, 1694, 1818, 2384
SspDI	GGCGCC	1 cut(s)	616
SspMI	CTAG	6 cut(s)	102, 389, 789, 933, 1727, 2156
SstI	GAGCTC	1 cut(s)	378
StyD4I	CCNGG	4 cut(s)	36, 1375, 2144, 2642
StyI	CCWWGG	3 cut(s)	547, 1769, 1972
TaiI	ACGT	3 cut(s)	1306, 1456, 2666
TatI	WGTACW	2 cut(s)	876, 1359
TauI	GCSGC	2 cut(s)	185, 1820
TfiI	GAWTC	7 cut(s)	632, 1064, 1099, 1573, 1597, 1718, 2762
Tru1I	TTAA	7 cut(s)	666, 677, 806, 1122, 1139, 1161, 2823
Tru9I	TTAA	7 cut(s)	666, 677, 806, 1122, 1139, 1161, 2823
TscAI	CASTG	8 cut(s)	268, 658, 1369, 1615, 2038, 2268, 2323, 2620
TseFI	GTSAC	5 cut(s)	340, 1606, 1658, 1810, 1906
TseI	GCWGC	7 cut(s)	479, 868, 1532, 2258, 2491, 2549, 2590
Tsp45I	GTSAC	5 cut(s)	340, 1606, 1658, 1810, 1906
TspDTI	ATGAA	8 cut(s)	692, 1041, 1157, 1202, 1467, 2127, 2634, 2775
TspGWI	ACGGA	2 cut(s)	522, 1437
TspRI	CASTG	8 cut(s)	268, 658, 1369, 1615, 2038, 2268, 2323, 2620
Van91I	CCANNNNNTGG	1 cut(s)	1803
VneI	GTGCAC	1 cut(s)	1619
VpaK11BI	GGWCC	8 cut(s)	326, 625, 722, 1207, 1275, 2237, 2389, 2646
XapI	RAATTY	5 cut(s)	199, 905, 1469, 1759, 2333
XceI	RCATGY	2 cut(s)	877, 1501
XhoI	CTCGAG	1 cut(s)	2299
XmiI	GTMKAC	1 cut(s)	2396
XmnI	GAANNNNTTC	1 cut(s)	1048
XspI	CTAG	6 cut(s)	102, 389, 789, 933, 1727, 2156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.