Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002701

Physical Location & Seq

Genomic Coordinates Reverse (-)

10070538 .. 10075409

Gene Structure 4872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG114400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGAGTGGACAATTCACCATGAATATAGCTTGGCTCCTGCTTTTGATGGTTTTCTTTAATGGGTTTGCCTCACATGGAGCTACCACCAACATCTCTACAAGACCAGAAGTTGTAAATGTTGGGGCCATGCTTGCTCTCAATTCCATTGTTGGCAAAGTTGCCAAAGTGGCAATACAAGCTGCTGTTGAAGATGTGAATTCTGACCCTTCTGTTCTCAGAGGAACCAAGATGATAGTTACAACGCAGAATTCAAACTACAGTGGATTTCTGGGCATAATTGAGGCTTTACGATTCATGGAGAAGGACACAGTGGCCATAATTGGACCCCAGAATGCTGTAACGGCTCATGCAGTATCTCACATTGCAAATGAGCTGCACACTCCTCTGTTGTCTTTTGCAGTAACAGATCCCACCCTGTCTTCACTTCAGTTCCCATATTTTGTTAGGACTACTCAGAACGATTTGTTTCAGATGGCTGCAGTAGCCGATATGGTTGAGTATTATGGATGGAGAGAGGTAATTGCAATATATGTTGATGATGATTTAGGGAGAAATGGGATTGCAGCATTAGGGGATTTGCTTGCTGAGAAACGTTCTAAGATCTCATACAAAGCACCTCTGGTTCTTGATCCTACTCGGAATAACATCACTGATGTACTGATTAAAGTGTCTTTAACCGAGTCTAGGATTATTGTTCTTCATGTTTATCCAGGTTGGGGCCCTGAGGTGCTTAGTGTGGCCAATTATCTTGGCATGATGGGAACAGGGTTTGTTTGGATAGCTACTCATTGGCTTTCTAGTTATATAGATTCCACCATTCCCCTCCCTATGAGTACTTTGGATAACATGCAAGGAGTTCTAACATTGCGCATGTACACGCCAGATACAGAACAGAAAAGAAAATTTGTTTCGAGGTGGAGCAACTTGACTGGTGGTAACCAAATTGGGTTGAATGCTTTCGGTCTCTATGCTTATGACTCTGTATGGTTGCTTGCTCATGCACTTGATGCCTTTTTTGATCAAGGGGGAAACATTTCATTCTCAAATGATTCAAGGTTGACTCAGATGCCCAGAGGGGACCTAAATCTTGAATATCTGAGTATATTTGATGGAGGGAGCTTGTTACTTCGTAACATATTTGGAGTTAATATGACTGGCACAACTGGCTCGTTTAAGTATACTCCAGATAGGGACCTCATTCGTCCTGCTTATGAAATCATAAATGTGATTGGCACTGGGGTTAGGAGGATTGGTTATTGGTCTAACCATTCTGGTTTATCAGTTAAGCCTCCAGAAACATTTTACACAAGCCCACCAAATCATTCTGGTTCAAACCAAAGCCTTTACAGTGTGATTTGGCCTGGAGAGACAGCACAGCAGCCTCGTGGTTGGGTTTTTCCAAACAATGGGAGGCATTTGAAGATTGCAGTCCCAAACCGTGCTAGTTTCCGTGAATTTGCATCATATACACGAAGCAATGACATGTTCACTGGGTACTGCATTGATGTTTTTACTGCTGCATTGAACTTGTTGCCCTATGCTGTTCCCTACAAATTTTTTCCTGTTGGCGATGGTAAAAGAAATCCAAGGGGCACTGACCTTGTGCACACAATCCAAACGGGTGAATATGATGCAGTAGTAGGTGATATTGCAATCACCACCAACAGAACCAGGATGGCAGATTTTACGCAGCCATACATCGAATCTGGGCTAGTAGTAGTTGCACCTGTTAAGACGACATTGAATTCAAATCCTTGGGCATTTCTGAGGCCGTTCAATAAAATGATGTGGGCTGTCACTGCTGCCTTCTTTCTCATTGTTGGAACAGTTGTTTGGATATTAGAGCATAGACTGAATGATGAATTTCGGGGCCCTCCTAGAAGACAAGTCGTCACTATTCTTTGGTTTAGCTTTTCAACTTGGTTCTTTGCCCATAGAGAAAATACAGTCAGCACCCTGGGTCGCCTAGTACTAATCATATGGCTATTTGTGGTTCTTATCATCAACTCAAGCTATACTGCAAGTTTGACCTCAATCCTAACGGTGCAAAAGCTTTCTTCCTCCATCAAAGGCATTGAAACTTTGCTCGAAAGCAAGGAACCCATTGGTTACCAACAGGGTTCATTTGCCAAGTATTATCTCGTTGAGGAACTCCACATTGACAGTTCCAGACTCGTGCCACTCGTCATGCCAGAAGATTATGTGAGAGCCTTAAAAGCCGGTCCACATAAAGAAGGTGGTGTTGCCGCAGTGATTGATGAGCGTGCATACATGGAGCTATTCCTCTCAAGCCGATGTGATTTCAGCATTGTAGGTCAAGAATTTACCAAAACCGGATGGGGATTTGTAAGTTTCTCCATTGTGTATGACTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

791

Amino Acids

88.11

Weight (kDa)

6.45

Isoelectric Point (pI)

35.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	48 - 337	9.6e-20	Periplasmic binding protein
ANF_receptor	PF01094	55 - 411	1.2e-86	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	489 - 576	2.1e-08	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	489 - 595	1.8e-06	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	595 - 699	2.7e-30	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0002701)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191
malus_domestica	MD02G1114100.v1.1 MD15G1229200.v1.1
prunus_persica	Prupe.7G106900_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1
pyrus_communis	pycom02g08900
rosa_chinensis	RchiOBHm_Chr2g0096991
rosa_laevigata	RLG00000016690
rosa_multiflora	Rmu_co8480363.1_g000001 Rmu_sc0005782.1_g000006
rosa_roxburghii	Rroxscaffold_2G00145100
rosa_rugosa	Rorug02G0062600 Rorug02G0062700
rosa_samantha	Rh2AG110500 Rh2BG112300 Rh2CG114400 Rh2DG113600
rosa_wichuraiana	Rw2G008550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	869
AccB7I	CCANNNNNTGG	1 cut(s)	1406
AccI	GTMKAC	1 cut(s)	1178
AciI	CCGC	1 cut(s)	2247
AclI	AACGTT	1 cut(s)	592
AclWI	GGATC	2 cut(s)	401, 623
AcoI	YGGCCR	2 cut(s)	312, 738
AcsI	RAATTY	8 cut(s)	196, 247, 902, 1454, 1553, 1744, 1862, 2321
AcuI	CTGAAG	1 cut(s)	410
AfaI	GTAC	5 cut(s)	657, 835, 875, 1496, 1971
AfiI	CCNNNNNNNGG	3 cut(s)	684, 716, 1406
AflIII	ACRYGT	1 cut(s)	1482
AhdI	GACNNNNNGTC	1 cut(s)	1889
AjnI	CCWGG	4 cut(s)	709, 1360, 1670, 1956
AjuI	GAANNNNNNNTTGG	2 cut(s)	1816, 1848
Alw21I	GWGCWC	1 cut(s)	1608
Alw26I	GTCTC	2 cut(s)	968, 1361
Alw44I	GTGCAC	1 cut(s)	1604
AlwI	GGATC	2 cut(s)	401, 623
AoxI	GGCC	7 cut(s)	123, 312, 718, 738, 1358, 1769, 1870
ApaI	GGGCCC	2 cut(s)	722, 1874
ApaLI	GTGCAC	1 cut(s)	1604
ApeKI	GCWGC	8 cut(s)	179, 373, 476, 563, 1378, 1517, 1690, 1802
ApoI	RAATTY	8 cut(s)	196, 247, 902, 1454, 1553, 1744, 1862, 2321
Asp700I	GAANNNNTTC	2 cut(s)	956, 1033
AspLEI	GCGC	1 cut(s)	870
AspS9I	GGNCC	9 cut(s)	123, 323, 718, 719, 1078, 1192, 1870, 1871, 2222
AsuHPI	GGTGA	4 cut(s)	7, 1634, 1648, 1655
AvaII	GGWCC	4 cut(s)	323, 1078, 1192, 2222
AxyI	CCTNAGG	1 cut(s)	723
BaeGI	GKGCMC	4 cut(s)	722, 1595, 1608, 1874
BalI	TGGCCA	2 cut(s)	314, 740
BanII	GRGCYC	2 cut(s)	722, 1874
BauI	CACGAG	2 cut(s)	1383, 2174
BbsI	GAAGAC	2 cut(s)	411, 1888
Bbv12I	GWGCWC	1 cut(s)	1608
BbvI	GCAGC	8 cut(s)	166, 360, 463, 575, 1390, 1504, 1702, 1789
BccI	CCATC	9 cut(s)	40, 466, 501, 751, 1103, 1565, 1669, 2072, 2331
BceAI	ACGGC	2 cut(s)	357, 1756
BciT130I	CCWGG	4 cut(s)	711, 1362, 1672, 1958
BclI	TGATCA	1 cut(s)	1018
BcoDI	GTCTC	2 cut(s)	968, 1361
BfaI	CTAG	6 cut(s)	684, 798, 1443, 1712, 1878, 1967
BfmI	CTRYAG	2 cut(s)	256, 477
BglI	GCCNNNNNGGC	1 cut(s)	167
BglII	AGATCT	1 cut(s)	600
BisI	GCNGC	9 cut(s)	180, 374, 477, 564, 1379, 1518, 1691, 1803, 2247
BlsI	GCNGC	9 cut(s)	181, 375, 478, 565, 1380, 1519, 1692, 1804, 2248
BmcAI	AGTACT	2 cut(s)	835, 1971
Bme1390I	CCNGG	4 cut(s)	711, 1362, 1672, 1958
Bme18I	GGWCC	4 cut(s)	323, 1078, 1192, 2222
BmeRI	GACNNNNNGTC	1 cut(s)	1889
BmgT120I	GGNCC	9 cut(s)	123, 323, 718, 719, 1078, 1192, 1870, 1871, 2222
BmrFI	CCNGG	4 cut(s)	711, 1362, 1672, 1958
BmrI	ACTGGG	2 cut(s)	1245, 1500
BmsI	GCATC	4 cut(s)	997, 1056, 1469, 1621
BmuI	ACTGGG	2 cut(s)	1245, 1500
BpiI	GAAGAC	2 cut(s)	411, 1888
BpmI	CTGGAG	3 cut(s)	1167, 1275, 1383
BpuEI	CTTGAG	2 cut(s)	1993, 2272
BsaI	GGTCTC	1 cut(s)	968
BsaJI	CCNNGG	4 cut(s)	1586, 1754, 1956, 1957
BsaWI	WCCGGW	1 cut(s)	2333
BsaXI	ACNNNNNCTCC	2 cut(s)	1237, 1267
Bsc4I	CCNNNNNNNGG	3 cut(s)	684, 716, 1406
Bse118I	RCCGGY	1 cut(s)	2219
Bse1I	ACTGG	5 cut(s)	934, 1159, 1168, 1240, 1495
Bse21I	CCTNAGG	1 cut(s)	723
Bse3DI	GCAATG	3 cut(s)	360, 863, 1483
BseBI	CCWGG	4 cut(s)	711, 1362, 1672, 1958
BseDI	CCNNGG	4 cut(s)	1586, 1754, 1956, 1957
BseGI	GGATG	3 cut(s)	512, 1680, 2342
BseLI	CCNNNNNNNGG	3 cut(s)	684, 716, 1406
BseMI	GCAATG	3 cut(s)	360, 863, 1483
BseMII	CTCAG	7 cut(s)	229, 467, 576, 714, 1076, 1088, 1757
BseNI	ACTGG	5 cut(s)	934, 1159, 1168, 1240, 1495
BseRI	GAGGAG	1 cut(s)	372
BseSI	GKGCMC	4 cut(s)	722, 1595, 1608, 1874
BseXI	GCAGC	8 cut(s)	166, 360, 463, 575, 1390, 1504, 1702, 1789
BsgI	GTGCAG	1 cut(s)	359
BshFI	GGCC	7 cut(s)	125, 314, 720, 740, 1360, 1771, 1872
BsiHKAI	GWGCWC	1 cut(s)	1608
BsiSI	CCGG	2 cut(s)	2220, 2334
BslFI	GGGAC	3 cut(s)	1091, 1205, 1415
BslI	CCNNNNNNNGG	3 cut(s)	684, 716, 1406
BsmAI	GTCTC	2 cut(s)	968, 1361
BsmFI	GGGAC	3 cut(s)	1091, 1205, 1415
BsmI	GAATGC	2 cut(s)	337, 958
BsnI	GGCC	7 cut(s)	125, 314, 720, 740, 1360, 1771, 1872
Bso31I	GGTCTC	1 cut(s)	968
Bsp120I	GGGCCC	2 cut(s)	718, 1870
Bsp1286I	GDGCHC	4 cut(s)	722, 1595, 1608, 1874
Bsp1407I	TGTACA	1 cut(s)	873
Bsp143I	GATC	4 cut(s)	406, 600, 628, 1018
BspACI	CCGC	1 cut(s)	2247
BspANI	GGCC	7 cut(s)	125, 314, 720, 740, 1360, 1771, 1872
BspCNI	CTCAG	7 cut(s)	228, 466, 577, 715, 1075, 1089, 1758
BspMAI	CTGCAG	1 cut(s)	481
BspPI	GGATC	2 cut(s)	401, 623
BspTNI	GGTCTC	1 cut(s)	968
BsrDI	GCAATG	3 cut(s)	360, 863, 1483
BsrFI	RCCGGY	1 cut(s)	2219
BsrGI	TGTACA	1 cut(s)	873
BsrI	ACTGG	5 cut(s)	934, 1159, 1168, 1240, 1495
BssAI	RCCGGY	1 cut(s)	2219
BssECI	CCNNGG	4 cut(s)	1586, 1754, 1956, 1957
BssMI	GATC	4 cut(s)	406, 600, 628, 1018
BssNAI	GTATAC	1 cut(s)	1179
BssSI	CACGAG	2 cut(s)	1383, 2174
BssT1I	CCWWGG	2 cut(s)	1586, 1754
Bst1107I	GTATAC	1 cut(s)	1179
Bst2BI	CACGAG	2 cut(s)	1383, 2174
Bst2UI	CCWGG	4 cut(s)	711, 1362, 1672, 1958
Bst4CI	ACNGT	8 cut(s)	260, 310, 1349, 1439, 1828, 1948, 2044, 2165
BstAPI	GCANNNNNTGC	1 cut(s)	1007
BstAUI	TGTACA	1 cut(s)	873
BstC8I	GCNNGC	4 cut(s)	132, 582, 993, 2265
BstDEI	CTNAG	9 cut(s)	215, 453, 585, 597, 723, 731, 1062, 1097, 1766
BstEII	GGTNACC	2 cut(s)	935, 2108
BstF5I	GGATG	3 cut(s)	512, 1680, 2342
BstHHI	GCGC	1 cut(s)	870
BstKTI	GATC	4 cut(s)	409, 603, 631, 1021
BstMAI	GTCTC	2 cut(s)	968, 1361
BstMBI	GATC	4 cut(s)	406, 600, 628, 1018
BstMWI	GCNNNNNNNGC	9 cut(s)	131, 167, 176, 341, 482, 1007, 1164, 1799, 2216
BstNI	CCWGG	4 cut(s)	711, 1362, 1672, 1958
BstNSI	RCATGY	3 cut(s)	850, 874, 1486
BstPI	GGTNACC	2 cut(s)	935, 2108
BstSCI	CCNGG	4 cut(s)	709, 1360, 1670, 1956
BstSFI	CTRYAG	2 cut(s)	256, 477
BstSLI	GKGCMC	4 cut(s)	722, 1595, 1608, 1874
BstV1I	GCAGC	8 cut(s)	166, 360, 463, 575, 1390, 1504, 1702, 1789
BstV2I	GAAGAC	2 cut(s)	411, 1888
BstX2I	RGATCY	2 cut(s)	406, 600
BstYI	RGATCY	2 cut(s)	406, 600
BstZ17I	GTATAC	1 cut(s)	1179
Bsu36I	CCTNAGG	1 cut(s)	723
BsuRI	GGCC	7 cut(s)	125, 314, 720, 740, 1360, 1771, 1872
BtgZI	GCGATG	1 cut(s)	1584
BtsCI	GGATG	3 cut(s)	512, 1680, 2342
BtsI	GCAGTG	2 cut(s)	1797, 2256
BtsIMutI	CAGTG	9 cut(s)	265, 315, 648, 1233, 1354, 1488, 1593, 1797, 2256
Cac8I	GCNNGC	4 cut(s)	132, 582, 993, 2265
CfoI	GCGC	1 cut(s)	870
Cfr10I	RCCGGY	1 cut(s)	2219
Cfr13I	GGNCC	9 cut(s)	123, 323, 718, 719, 1078, 1192, 1870, 1871, 2222
Csp6I	GTAC	5 cut(s)	656, 834, 874, 1495, 1970
CviQI	GTAC	5 cut(s)	656, 834, 874, 1495, 1970
DdeI	CTNAG	9 cut(s)	215, 453, 585, 597, 723, 731, 1062, 1097, 1766
DpnI	GATC	4 cut(s)	408, 602, 630, 1020
DpnII	GATC	4 cut(s)	406, 600, 628, 1018
DriI	GACNNNNNGTC	1 cut(s)	1889
EaeI	YGGCCR	2 cut(s)	312, 738
Eam1105I	GACNNNNNGTC	1 cut(s)	1889
Eco130I	CCWWGG	2 cut(s)	1586, 1754
Eco24I	GRGCYC	2 cut(s)	722, 1874
Eco31I	GGTCTC	1 cut(s)	968
Eco47I	GGWCC	4 cut(s)	323, 1078, 1192, 2222
Eco57I	CTGAAG	1 cut(s)	410
Eco81I	CCTNAGG	1 cut(s)	723
Eco91I	GGTNACC	2 cut(s)	935, 2108
EcoO109I	RGGNCCY	6 cut(s)	718, 719, 1078, 1192, 1870, 1871
EcoO65I	GGTNACC	2 cut(s)	935, 2108
EcoRI	GAATTC	3 cut(s)	196, 247, 1744
EcoRII	CCWGG	4 cut(s)	709, 1360, 1670, 1956
EcoT14I	CCWWGG	2 cut(s)	1586, 1754
EcoT38I	GRGCYC	2 cut(s)	722, 1874
ErhI	CCWWGG	2 cut(s)	1586, 1754
FaqI	GGGAC	3 cut(s)	1091, 1205, 1415
FauNDI	CATATG	1 cut(s)	1979
FbaI	TGATCA	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	1178
Fnu4HI	GCNGC	9 cut(s)	180, 374, 477, 564, 1379, 1518, 1691, 1803, 2247
FokI	GGATG	3 cut(s)	519, 1687, 2349
FriOI	GRGCYC	2 cut(s)	722, 1874
Fsp4HI	GCNGC	9 cut(s)	180, 374, 477, 564, 1379, 1518, 1691, 1803, 2247
FspBI	CTAG	6 cut(s)	684, 798, 1443, 1712, 1878, 1967
FspI	TGCGCA	1 cut(s)	869
GlaI	GCGC	1 cut(s)	869
GluI	GCNGC	9 cut(s)	180, 374, 477, 564, 1379, 1518, 1691, 1803, 2247
GsuI	CTGGAG	3 cut(s)	1167, 1275, 1383
HaeIII	GGCC	7 cut(s)	125, 314, 720, 740, 1360, 1771, 1872
HapII	CCGG	2 cut(s)	2220, 2334
HhaI	GCGC	1 cut(s)	870
Hin6I	GCGC	1 cut(s)	868
HinP1I	GCGC	1 cut(s)	868
HincII	GTYRAC	1 cut(s)	1059
HindII	GTYRAC	1 cut(s)	1059
HindIII	AAGCTT	1 cut(s)	2051
HinfI	GANTC	8 cut(s)	291, 680, 809, 977, 1049, 1060, 1703, 2172
HpaII	CCGG	2 cut(s)	2220, 2334
HphI	GGTGA	4 cut(s)	7, 1634, 1648, 1655
Hpy166II	GTNNAC	7 cut(s)	8, 876, 1059, 1179, 1488, 1606, 2225
Hpy188I	TCNGA	8 cut(s)	202, 218, 456, 471, 639, 1065, 1098, 1767
Hpy188III	TCNNGA	6 cut(s)	626, 1088, 1184, 1292, 2169, 2318
Hpy8I	GTNNAC	7 cut(s)	8, 876, 1059, 1179, 1488, 1606, 2225
HpyAV	CCTTC	4 cut(s)	216, 295, 1816, 2228
HpyCH4III	ACNGT	8 cut(s)	260, 310, 1349, 1439, 1828, 1948, 2044, 2165
HpyCH4IV	ACGT	1 cut(s)	592
HpyF10VI	GCNNNNNNNGC	9 cut(s)	131, 167, 176, 341, 482, 1007, 1164, 1799, 2216
HpyF3I	CTNAG	9 cut(s)	215, 453, 585, 597, 723, 731, 1062, 1097, 1766
HpySE526I	ACGT	1 cut(s)	592
HspAI	GCGC	1 cut(s)	868
Ksp22I	TGATCA	1 cut(s)	1018
Kzo9I	GATC	4 cut(s)	406, 600, 628, 1018
LmnI	GCTCC	5 cut(s)	39, 77, 918, 1116, 2275
Lsp1109I	GCAGC	8 cut(s)	166, 360, 463, 575, 1390, 1504, 1702, 1789
LweI	GCATC	4 cut(s)	997, 1056, 1469, 1621
MaeI	CTAG	6 cut(s)	684, 798, 1443, 1712, 1878, 1967
MaeII	ACGT	1 cut(s)	592
MaeIII	GTNAC	9 cut(s)	235, 337, 400, 935, 1122, 1130, 1795, 1891, 2108
MalI	GATC	4 cut(s)	408, 602, 630, 1020
MboI	GATC	4 cut(s)	406, 600, 628, 1018
MboII	GAAGA	7 cut(s)	200, 411, 689, 1432, 1893, 2049, 2207
MflI	RGATCY	2 cut(s)	406, 600
MhlI	GDGCHC	4 cut(s)	722, 1595, 1608, 1874
MlsI	TGGCCA	2 cut(s)	314, 740
MluNI	TGGCCA	2 cut(s)	314, 740
MlyI	GAGTC	4 cut(s)	689, 971, 1054, 2166
MmeI	TCCRAC	1 cut(s)	1801
Mox20I	TGGCCA	2 cut(s)	314, 740
MroXI	GAANNNNTTC	2 cut(s)	956, 1033
MscI	TGGCCA	2 cut(s)	314, 740
MseI	TTAA	9 cut(s)	57, 663, 674, 1146, 1173, 1284, 1731, 2213, 2374
MslI	CAYNNNNRTG	1 cut(s)	1223
Msp20I	TGGCCA	2 cut(s)	314, 740
MspI	CCGG	2 cut(s)	2220, 2334
MspR9I	CCNGG	4 cut(s)	711, 1362, 1672, 1958
Mva1269I	GAATGC	2 cut(s)	337, 958
MvaI	CCWGG	4 cut(s)	711, 1362, 1672, 1958
MwoI	GCNNNNNNNGC	9 cut(s)	131, 167, 176, 341, 482, 1007, 1164, 1799, 2216
NdeI	CATATG	1 cut(s)	1979
NdeII	GATC	4 cut(s)	406, 600, 628, 1018
NmuCI	GTSAC	2 cut(s)	1795, 1891
NsbI	TGCGCA	1 cut(s)	869
NspI	RCATGY	3 cut(s)	850, 874, 1486
PasI	CCCWGGG	1 cut(s)	1957
PciI	ACATGT	1 cut(s)	1482
PcsI	WCGNNNNNNNCGW	1 cut(s)	2181
PctI	GAATGC	2 cut(s)	337, 958
PdmI	GAANNNNTTC	2 cut(s)	956, 1033
PfeI	GAWTC	4 cut(s)	291, 809, 1049, 1703
PflMI	CCANNNNNTGG	1 cut(s)	1406
PkrI	GCNGC	9 cut(s)	181, 375, 478, 565, 1380, 1519, 1692, 1804, 2248
PleI	GAGTC	4 cut(s)	688, 971, 1054, 2166
PpsI	GAGTC	4 cut(s)	688, 971, 1054, 2166
PpuMI	RGGWCCY	2 cut(s)	1078, 1192
PscI	ACATGT	1 cut(s)	1482
Psp1406I	AACGTT	1 cut(s)	592
Psp5II	RGGWCCY	2 cut(s)	1078, 1192
Psp6I	CCWGG	4 cut(s)	709, 1360, 1670, 1956
PspEI	GGTNACC	2 cut(s)	935, 2108
PspGI	CCWGG	4 cut(s)	709, 1360, 1670, 1956
PspOMI	GGGCCC	2 cut(s)	718, 1870
PspPI	GGNCC	9 cut(s)	123, 323, 718, 719, 1078, 1192, 1870, 1871, 2222
PspPPI	RGGWCCY	2 cut(s)	1078, 1192
PstI	CTGCAG	1 cut(s)	481
PsuI	RGATCY	2 cut(s)	406, 600
RsaI	GTAC	5 cut(s)	657, 835, 875, 1496, 1971
RsaNI	GTAC	5 cut(s)	656, 834, 874, 1495, 1970
RseI	CAYNNNNRTG	1 cut(s)	1223
SaqAI	TTAA	9 cut(s)	57, 663, 674, 1146, 1173, 1284, 1731, 2213, 2374
SatI	GCNGC	9 cut(s)	180, 374, 477, 564, 1379, 1518, 1691, 1803, 2247
Sau3AI	GATC	4 cut(s)	406, 600, 628, 1018
Sau96I	GGNCC	9 cut(s)	123, 323, 718, 719, 1078, 1192, 1870, 1871, 2222
ScaI	AGTACT	2 cut(s)	835, 1971
SchI	GAGTC	4 cut(s)	689, 971, 1054, 2166
ScrFI	CCNGG	4 cut(s)	711, 1362, 1672, 1958
SduI	GDGCHC	4 cut(s)	722, 1595, 1608, 1874
SfaNI	GCATC	4 cut(s)	997, 1056, 1469, 1621
SfcI	CTRYAG	2 cut(s)	256, 477
SinI	GGWCC	4 cut(s)	323, 1078, 1192, 2222
SmiMI	CAYNNNNRTG	1 cut(s)	1223
SmlI	CTYRAG	2 cut(s)	2008, 2287
SmoI	CTYRAG	2 cut(s)	2008, 2287
SsiI	CCGC	1 cut(s)	2247
SspMI	CTAG	6 cut(s)	684, 798, 1443, 1712, 1878, 1967
StyD4I	CCNGG	4 cut(s)	709, 1360, 1670, 1956
StyI	CCWWGG	2 cut(s)	1586, 1754
TaaI	ACNGT	8 cut(s)	260, 310, 1349, 1439, 1828, 1948, 2044, 2165
TaiI	ACGT	1 cut(s)	595
TaqI	TCGA	3 cut(s)	911, 1701, 2088
TaqII	GACCGA	1 cut(s)	950
TatI	WGTACW	4 cut(s)	655, 833, 873, 1969
TauI	GCSGC	1 cut(s)	2249
TfiI	GAWTC	4 cut(s)	291, 809, 1049, 1703
Tru1I	TTAA	9 cut(s)	57, 663, 674, 1146, 1173, 1284, 1731, 2213, 2374
Tru9I	TTAA	9 cut(s)	57, 663, 674, 1146, 1173, 1284, 1731, 2213, 2374
TscAI	CASTG	9 cut(s)	265, 315, 655, 1240, 1354, 1495, 1600, 1804, 2256
TseFI	GTSAC	2 cut(s)	1795, 1891
TseI	GCWGC	8 cut(s)	179, 373, 476, 563, 1378, 1517, 1690, 1802
Tsp45I	GTSAC	2 cut(s)	1795, 1891
TspDTI	ATGAA	7 cut(s)	35, 283, 689, 1026, 1227, 1875, 2112
TspGWI	ACGGA	1 cut(s)	1439
TspRI	CASTG	9 cut(s)	265, 315, 655, 1240, 1354, 1495, 1600, 1804, 2256
Van91I	CCANNNNNTGG	1 cut(s)	1406
VneI	GTGCAC	1 cut(s)	1604
VpaK11BI	GGWCC	4 cut(s)	323, 1078, 1192, 2222
XapI	RAATTY	8 cut(s)	196, 247, 902, 1454, 1553, 1744, 1862, 2321
XceI	RCATGY	3 cut(s)	850, 874, 1486
XmiI	GTMKAC	1 cut(s)	1178
XmnI	GAANNNNTTC	2 cut(s)	956, 1033
XspI	CTAG	6 cut(s)	684, 798, 1443, 1712, 1878, 1967
ZrmI	AGTACT	2 cut(s)	835, 1971

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.