Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002701

Physical Location & Seq

Genomic Coordinates Reverse (-)

9007142 .. 9010667

Gene Structure 3526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016690

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2619 bp

ATGAATATAGCTTGGCTCCTGCTTTTGATGGTTTTCTTTAATGGGTTTGCCTCACATGGAGCTACCACCAACATCTCTACAAGACCAGAAGTTGTAAATGTTGGGGCTATTCTTGCTTTGAATTCCATTGTTGGCAAAGTTGCCAAAGTGGCAATACAAGCTGCTGTTGAAGATGTGAATTCTGATCCTTCTGTTCTCAGTGGAACCAAGATGATAGTTACAATGCAGAATTCAAATTACAGTGGATTTCTGGGCATAATTGAGGCTTTACGATTCATGGAGAAGGACACAGTGGCCATAATTGGACCCCAGAATGCTGTAACGGCTCACGCCGTATCTCACATTGCAAATGAGCTGCAAACTCCTCTATTGTCATTTGCAGTAACAGATCCCACCCTGTCTTCACTTCAGTTCCCATATTTTGTTAGGACTACTCAGAACGATTTGTTTCAGATGGCTGCAATAGCCGATATGGTTGAGCACTATGGATGGAGAGAGGTCATTGCAATATATGTTGATGATGATTTAGGGAGAAATGGGATTGCAGCATTAGGGGATTTGCTTGCTGAGAAACGTTCTAAGATCTCATACAAAGCACCTCTGGTTGTTGATCCTACTCGGAATAACATCACTGATGTACTGATTAAAGTGTCTTTAACTGAGTCGAGGATTATTATTCTTCATGTTTATCCAGGTTGGGGCCCTGACGTGCTTAGTGTGGCCAATTATCTTGGCATGATGGGAACAGGGTTTGTTTGGATAGCTACTCATTGGCTTTCTAGTTATATAGATTCCACCGTTCCCCTCCCTATGAGTACTATGGATAATATGCAAGGAGTTCTAACATTGCGCATGTACACACCAGATACAGAACAGAAAAGAAAATTTGTTTCGAGGTGGAGCAACTTGACTAGTGGCGGTAGCCAAATTGGGTTGAATGCTTTCGGTCTCTATGCTTATGACTCTGTATGGTTGCTTGCTCATGCACTTGATGCCTTTTTTGATCAAGGGGGAAACATTTCATTCTCAAATGATTCAAGGTTGACTCAGATGCCCAGAGGGGACCTAAATCTTCAATATCTGAATATATTTGATGGAGGGAGCTTGTTACTTCGTAACATATTTGCAGTTAATATGACTGGCACAACAGGCTCGTTTAAGTATACTCCAGGTAGGGACCTCATTCATCCTGCTTATGAAATCATAAATGTGATTGGCACTGGGGTTAGGAGGATTGGTTATTGGTCTAACCATTCTGGTTTATCAGTTAAGCCTCCAGAAACATTTTACACAACCCCACCAAATCATTCTAGTTCAAACCAAAGCCTTTACAGTGTGATTTGGCCTGGAGAGACGGCACAGCAGCCTCGTGGTTGGGTTTTTCCAAACAATGGGAGGCATTTGAAGATTGCAGTCCCAATCCGTGCTAGTTTCCGTGAATTTGTATCATATACACGAAGCAATGACATGTTCACTGGGTACTGCATTGATGTTTTTACTGCTGCATTGAACTTGTTGCCCTATGCTGTTCCCTACAAATTTTTTCCTATTGGTGATGGTAAAAGAAATCCAGGGAGCACTGAACTTGTGCACACAATCCAAACGGGTATAATAATGTCTTTCAATTGGTGTAACTACTCTGATAATGTCTGTTTGTGGTCAAAATCCCACAACCATTGTACTTTCATTTGCAGGTTTAGCTTTTCAACTTGGTTCTTTGCCCATAGAGAAAATACAGTCAGCACCCTGGGTCGCCTAGTACTAATCTTATGGCTATTTGTGGTTCTTATCATCAACTCAAGCTATACTGCAAGTTTGACCTCAATCCTAACAGTGCAAAAGCTTTCTTCCTCCATCAAAGGCATTGAAACTTTGCTTGAAAACAAGGACCCCATTGGTTACCAACAGGGTTCATTTGCCAAGAATTATCTCATTGAGGAACTCCACATTGACAGTTCCAGACTCGTGCCACTCGTCATGCCAGAAGATTATGTGAGAGCCTTAAAAGCTGGTCCACATAAAGAAGGTGGTGTTGCCGCAGTGATTGATGAGCGTGCATACATGGAGCTATTCCTCTCAAGCCGATGCGATTTCAGCGTTGTAGGTCAAGAATTTACCAAAACCGGATGGGGATTTGCTTTCCCAAGGGACTCGCCTCTATCAGTGGACCTGTCAACTGCTCTGTTGAAGCTGTCGGAGAATGGGGATCTACAGAGGATCCATGACAAATGGCTTCTCAGAAGTCCTTGTACTTCACAAGGAGCAAAGCTAGAAGTGGACAGGCTTGAACTTAGAAGCTTCTCGGCCCTTTTTATTCTCTGTGGCGGAGCTTGTTTGGTTGCTCTCATTATATATTTCAGCATGATGTGTTACCAGTTCACCAAGCGGTACACTGACAGTTTGTCTTCTTCCGGGAGCTCCACATCTCGGCGTCTTCAGACCTTTCTCACATTTGTTGACGAGAAGGAAGAAGTACAAAGCCGATCCAAAAGGAGAAGCATGGAGAAGATGTCAAACCGAAGTGCGGGTGAGGATGACTCGTCAAACAGTTCCAAAAGAAGACATATAGATCAGTGCTCATGTGCAAGCAGAAGTTTTGAAGATAGTAACAATGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007267 GO:0008066 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031347 GO:0031349 GO:0032870 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0042742 GO:0043200 GO:0043207 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046873 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071395 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0080134 GO:0098542 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

873

Amino Acids

97.06

Weight (kDa)

7.03

Isoelectric Point (pI)

49.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	42 - 332	2.6e-18	Periplasmic binding protein
ANF_receptor	PF01094	49 - 406	1.3e-86	Receptor family ligand binding region
Lig_chan	PF00060	561 - 778	9e-21	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002701)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191 FvH4_1g10191
malus_domestica	MD02G1114100.v1.1 MD15G1229200.v1.1
prunus_persica	Prupe.7G106900_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184200_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G184600_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1 Prupe.7G223100_v2.0.a1
pyrus_communis	pycom02g08900
rosa_chinensis	RchiOBHm_Chr2g0096991
rosa_laevigata	RLG00000016690
rosa_multiflora	Rmu_co8480363.1_g000001 Rmu_sc0005782.1_g000006
rosa_roxburghii	Rroxscaffold_2G00145100
rosa_rugosa	Rorug02G0062600 Rorug02G0062700
rosa_samantha	Rh2AG110500 Rh2BG112300 Rh2CG114400 Rh2DG113600
rosa_wichuraiana	Rw2G008550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	851
Acc36I	ACCTGC	1 cut(s)	1683
AccB7I	CCANNNNNTGG	1 cut(s)	1391
AccI	GTMKAC	1 cut(s)	1163
AciI	CCGC	5 cut(s)	918, 2037, 2325, 2386, 2525
AclI	AACGTT	1 cut(s)	574
AclWI	GGATC	7 cut(s)	179, 383, 605, 2212, 2214, 2225, 2478
AcoI	YGGCCR	2 cut(s)	294, 720
AcsI	RAATTY	7 cut(s)	121, 178, 229, 884, 1439, 1538, 2111
AcuI	CTGAAG	2 cut(s)	392, 2420
AcyI	GRCGYC	1 cut(s)	2431
AfaI	GTAC	9 cut(s)	639, 817, 857, 1481, 1681, 1761, 2251, 2390, 2475
AfiI	CCNNNNNNNGG	4 cut(s)	698, 1391, 2427, 2524
AflIII	ACRYGT	1 cut(s)	1467
AhdI	GACNNNNNGTC	1 cut(s)	2401
AhlI	ACTAGT	1 cut(s)	911
AjiI	CACGTC	1 cut(s)	709
AjnI	CCWGG	5 cut(s)	691, 1168, 1345, 1570, 1746
Alw21I	GWGCWC	5 cut(s)	483, 1580, 1593, 2420, 2579
Alw26I	GTCTC	2 cut(s)	953, 1346
Alw44I	GTGCAC	1 cut(s)	1589
AlwI	GGATC	7 cut(s)	179, 383, 605, 2212, 2214, 2225, 2478
AoxI	GGCC	5 cut(s)	294, 700, 720, 1343, 2304
ApaI	GGGCCC	1 cut(s)	704
ApaLI	GTGCAC	1 cut(s)	1589
ApeKI	GCWGC	6 cut(s)	161, 355, 458, 545, 1363, 1502
ApoI	RAATTY	7 cut(s)	121, 178, 229, 884, 1439, 1538, 2111
Asp700I	GAANNNNTTC	2 cut(s)	941, 1018
AspLEI	GCGC	1 cut(s)	852
AspS9I	GGNCC	9 cut(s)	305, 700, 701, 1063, 1177, 1888, 2012, 2167, 2305
AsuC2I	CCSGG	1 cut(s)	2413
AsuHPI	GGTGA	3 cut(s)	1565, 2371, 2540
AvaII	GGWCC	6 cut(s)	305, 1063, 1177, 1888, 2012, 2167
BaeGI	GKGCMC	2 cut(s)	704, 1593
BalI	TGGCCA	2 cut(s)	296, 722
BamHI	GGATCC	1 cut(s)	2217
BanII	GRGCYC	2 cut(s)	704, 2420
BarI	GAAGNNNNNNTAC	2 cut(s)	2233, 2265
BauI	CACGAG	2 cut(s)	1368, 1964
BbsI	GAAGAC	4 cut(s)	393, 2397, 2426, 2566
Bbv12I	GWGCWC	5 cut(s)	483, 1580, 1593, 2420, 2579
BbvI	GCAGC	6 cut(s)	148, 342, 445, 557, 1375, 1489
BccI	CCATC	8 cut(s)	22, 448, 483, 733, 1088, 1550, 1862, 2121
BceAI	ACGGC	3 cut(s)	317, 339, 1371
BciT130I	CCWGG	5 cut(s)	693, 1170, 1347, 1572, 1748
BclI	TGATCA	1 cut(s)	1003
BcnI	CCSGG	1 cut(s)	2413
BcoDI	GTCTC	2 cut(s)	953, 1346
BcuI	ACTAGT	1 cut(s)	911
BfaI	CTAG	6 cut(s)	780, 912, 1311, 1428, 1757, 2270
BfmI	CTRYAG	1 cut(s)	2210
BfuAI	ACCTGC	1 cut(s)	1683
BglI	GCCNNNNNGGC	1 cut(s)	149
BglII	AGATCT	1 cut(s)	582
BisI	GCNGC	7 cut(s)	162, 356, 459, 546, 1364, 1503, 2037
BlsI	GCNGC	7 cut(s)	163, 357, 460, 547, 1365, 1504, 2038
BmcAI	AGTACT	2 cut(s)	817, 1761
Bme1390I	CCNGG	6 cut(s)	693, 1170, 1347, 1572, 1748, 2413
Bme18I	GGWCC	6 cut(s)	305, 1063, 1177, 1888, 2012, 2167
BmeRI	GACNNNNNGTC	1 cut(s)	2401
BmgBI	CACGTC	1 cut(s)	709
BmgT120I	GGNCC	9 cut(s)	305, 700, 701, 1063, 1177, 1888, 2012, 2167, 2305
BmiI	GGNNCC	9 cut(s)	17, 205, 307, 701, 702, 1064, 1178, 1890, 2219
BmrFI	CCNGG	6 cut(s)	693, 1170, 1347, 1572, 1748, 2413
BmrI	ACTGGG	2 cut(s)	1230, 1485
BmsI	GCATC	3 cut(s)	982, 1041, 2075
BmuI	ACTGGG	2 cut(s)	1230, 1485
BpiI	GAAGAC	4 cut(s)	393, 2397, 2426, 2566
BplI	GAGNNNNNCTC	2 cut(s)	2522, 2554
BpmI	CTGGAG	3 cut(s)	1152, 1260, 1368
BpuEI	CTTGAG	2 cut(s)	1783, 2062
BpuMI	CCSGG	1 cut(s)	2413
BsaHI	GRCGYC	1 cut(s)	2431
BsaI	GGTCTC	1 cut(s)	953
BsaJI	CCNNGG	4 cut(s)	1571, 1746, 1747, 2144
BsaWI	WCCGGW	1 cut(s)	2123
BsaXI	ACNNNNNCTCC	4 cut(s)	1222, 1252, 2495, 2525
Bsc4I	CCNNNNNNNGG	4 cut(s)	698, 1391, 2427, 2524
Bse1I	ACTGG	4 cut(s)	1144, 1225, 1480, 2374
Bse3DI	GCAATG	4 cut(s)	342, 501, 845, 1468
BseBI	CCWGG	5 cut(s)	693, 1170, 1347, 1572, 1748
BseDI	CCNNGG	4 cut(s)	1571, 1746, 1747, 2144
BseGI	GGATG	4 cut(s)	494, 1186, 2132, 2539
BseLI	CCNNNNNNNGG	4 cut(s)	698, 1391, 2427, 2524
BseMI	GCAATG	4 cut(s)	342, 501, 845, 1468
BseMII	CTCAG	6 cut(s)	211, 449, 558, 651, 1061, 2251
BseNI	ACTGG	4 cut(s)	1144, 1225, 1480, 2374
BseRI	GAGGAG	1 cut(s)	354
BseSI	GKGCMC	2 cut(s)	704, 1593
BseXI	GCAGC	6 cut(s)	148, 342, 445, 557, 1375, 1489
BshFI	GGCC	5 cut(s)	296, 702, 722, 1345, 2306
BsiHKAI	GWGCWC	5 cut(s)	483, 1580, 1593, 2420, 2579
BsiSI	CCGG	2 cut(s)	2124, 2412
BslFI	GGGAC	4 cut(s)	1076, 1190, 1400, 2162
BslI	CCNNNNNNNGG	4 cut(s)	698, 1391, 2427, 2524
BsmAI	GTCTC	2 cut(s)	953, 1346
BsmBI	CGTCTC	1 cut(s)	1346
BsmFI	GGGAC	4 cut(s)	1076, 1190, 1400, 2162
BsmI	GAATGC	2 cut(s)	319, 943
BsnI	GGCC	5 cut(s)	296, 702, 722, 1345, 2306
Bso31I	GGTCTC	1 cut(s)	953
Bsp120I	GGGCCC	1 cut(s)	700
Bsp1286I	GDGCHC	6 cut(s)	483, 704, 1580, 1593, 2420, 2579
Bsp1407I	TGTACA	1 cut(s)	855
Bsp143I	GATC	9 cut(s)	184, 388, 582, 610, 1003, 2206, 2217, 2483, 2569
BspACI	CCGC	5 cut(s)	918, 2037, 2325, 2386, 2525
BspANI	GGCC	5 cut(s)	296, 702, 722, 1345, 2306
BspCNI	CTCAG	6 cut(s)	210, 448, 559, 652, 1060, 2250
BspLI	GGNNCC	9 cut(s)	17, 205, 307, 701, 702, 1064, 1178, 1890, 2219
BspMI	ACCTGC	1 cut(s)	1683
BspPI	GGATC	7 cut(s)	179, 383, 605, 2212, 2214, 2225, 2478
BspTNI	GGTCTC	1 cut(s)	953
BsrDI	GCAATG	4 cut(s)	342, 501, 845, 1468
BsrGI	TGTACA	1 cut(s)	855
BsrI	ACTGG	4 cut(s)	1144, 1225, 1480, 2374
BssECI	CCNNGG	4 cut(s)	1571, 1746, 1747, 2144
BssMI	GATC	9 cut(s)	184, 388, 582, 610, 1003, 2206, 2217, 2483, 2569
BssNAI	GTATAC	1 cut(s)	1164
BssNI	GRCGYC	1 cut(s)	2431
BssSI	CACGAG	2 cut(s)	1368, 1964
BssT1I	CCWWGG	1 cut(s)	2144
Bst1107I	GTATAC	1 cut(s)	1164
Bst2BI	CACGAG	2 cut(s)	1368, 1964
Bst2UI	CCWGG	5 cut(s)	693, 1170, 1347, 1572, 1748
Bst4CI	ACNGT	9 cut(s)	242, 292, 799, 1334, 1738, 1834, 1955, 2399, 2549
BstACI	GRCGYC	1 cut(s)	2431
BstAPI	GCANNNNNTGC	1 cut(s)	992
BstAUI	TGTACA	1 cut(s)	855
BstC8I	GCNNGC	4 cut(s)	564, 978, 2055, 2587
BstDEI	CTNAG	9 cut(s)	197, 435, 567, 579, 660, 713, 1047, 2237, 2291
BstEII	GGTNACC	1 cut(s)	1898
BstF5I	GGATG	4 cut(s)	494, 1186, 2132, 2539
BstHHI	GCGC	1 cut(s)	852
BstKTI	GATC	9 cut(s)	187, 391, 585, 613, 1006, 2209, 2220, 2486, 2572
BstMAI	GTCTC	2 cut(s)	953, 1346
BstMBI	GATC	9 cut(s)	184, 388, 582, 610, 1003, 2206, 2217, 2483, 2569
BstNI	CCWGG	5 cut(s)	693, 1170, 1347, 1572, 1748
BstNSI	RCATGY	2 cut(s)	856, 1471
BstPI	GGTNACC	1 cut(s)	1898
BstSCI	CCNGG	6 cut(s)	691, 1168, 1345, 1570, 1746, 2411
BstSFI	CTRYAG	1 cut(s)	2210
BstSLI	GKGCMC	2 cut(s)	704, 1593
BstV1I	GCAGC	6 cut(s)	148, 342, 445, 557, 1375, 1489
BstV2I	GAAGAC	4 cut(s)	393, 2397, 2426, 2566
BstX2I	RGATCY	4 cut(s)	388, 582, 2206, 2217
BstYI	RGATCY	4 cut(s)	388, 582, 2206, 2217
BstZ17I	GTATAC	1 cut(s)	1164
BsuRI	GGCC	5 cut(s)	296, 702, 722, 1345, 2306
BtrI	CACGTC	1 cut(s)	709
BtsCI	GGATG	4 cut(s)	494, 1186, 2132, 2539
BtsI	GCAGTG	1 cut(s)	2046
BveI	ACCTGC	1 cut(s)	1683
Cac8I	GCNNGC	4 cut(s)	564, 978, 2055, 2587
CfoI	GCGC	1 cut(s)	852
Cfr13I	GGNCC	9 cut(s)	305, 700, 701, 1063, 1177, 1888, 2012, 2167, 2305
CseI	GACGC	1 cut(s)	2420
Csp6I	GTAC	9 cut(s)	638, 816, 856, 1480, 1680, 1760, 2250, 2389, 2474
CspCI	CAANNNNNGTGG	2 cut(s)	1658, 1693
CviQI	GTAC	9 cut(s)	638, 816, 856, 1480, 1680, 1760, 2250, 2389, 2474
DdeI	CTNAG	9 cut(s)	197, 435, 567, 579, 660, 713, 1047, 2237, 2291
DpnI	GATC	9 cut(s)	186, 390, 584, 612, 1005, 2208, 2219, 2485, 2571
DpnII	GATC	9 cut(s)	184, 388, 582, 610, 1003, 2206, 2217, 2483, 2569
DriI	GACNNNNNGTC	1 cut(s)	2401
EaeI	YGGCCR	2 cut(s)	294, 720
Eam1105I	GACNNNNNGTC	1 cut(s)	2401
EciI	GGCGGA	1 cut(s)	2340
Ecl136II	GAGCTC	1 cut(s)	2418
Eco130I	CCWWGG	1 cut(s)	2144
Eco24I	GRGCYC	2 cut(s)	704, 2420
Eco31I	GGTCTC	1 cut(s)	953
Eco47I	GGWCC	6 cut(s)	305, 1063, 1177, 1888, 2012, 2167
Eco53kI	GAGCTC	1 cut(s)	2418
Eco57I	CTGAAG	2 cut(s)	392, 2420
Eco91I	GGTNACC	1 cut(s)	1898
EcoICRI	GAGCTC	1 cut(s)	2418
EcoO109I	RGGNCCY	5 cut(s)	700, 701, 1063, 1177, 1888
EcoO65I	GGTNACC	1 cut(s)	1898
EcoRI	GAATTC	3 cut(s)	121, 178, 229
EcoRII	CCWGG	5 cut(s)	691, 1168, 1345, 1570, 1746
EcoT14I	CCWWGG	1 cut(s)	2144
EcoT38I	GRGCYC	2 cut(s)	704, 2420
ErhI	CCWWGG	1 cut(s)	2144
Esp3I	CGTCTC	1 cut(s)	1346
FaqI	GGGAC	4 cut(s)	1076, 1190, 1400, 2162
FauI	CCCGC	1 cut(s)	2518
FbaI	TGATCA	1 cut(s)	1003
FblI	GTMKAC	1 cut(s)	1163
Fnu4HI	GCNGC	7 cut(s)	162, 356, 459, 546, 1364, 1503, 2037
FokI	GGATG	4 cut(s)	501, 1173, 2139, 2546
FriOI	GRGCYC	2 cut(s)	704, 2420
Fsp4HI	GCNGC	7 cut(s)	162, 356, 459, 546, 1364, 1503, 2037
FspBI	CTAG	6 cut(s)	780, 912, 1311, 1428, 1757, 2270
FspI	TGCGCA	1 cut(s)	851
GlaI	GCGC	1 cut(s)	851
GluI	GCNGC	7 cut(s)	162, 356, 459, 546, 1364, 1503, 2037
GsuI	CTGGAG	3 cut(s)	1152, 1260, 1368
HaeIII	GGCC	5 cut(s)	296, 702, 722, 1345, 2306
HapII	CCGG	2 cut(s)	2124, 2412
HgaI	GACGC	1 cut(s)	2420
HhaI	GCGC	1 cut(s)	852
Hin1I	GRCGYC	1 cut(s)	2431
Hin6I	GCGC	1 cut(s)	850
HinP1I	GCGC	1 cut(s)	850
HincII	GTYRAC	3 cut(s)	1044, 2175, 2458
HindII	GTYRAC	3 cut(s)	1044, 2175, 2458
HindIII	AAGCTT	2 cut(s)	1841, 2296
HinfI	GANTC	9 cut(s)	273, 662, 791, 962, 1034, 1045, 1962, 2150, 2537
HpaII	CCGG	2 cut(s)	2124, 2412
HphI	GGTGA	3 cut(s)	1565, 2371, 2540
Hpy188III	TCNNGA	3 cut(s)	1277, 1959, 2108
HpyAV	CCTTC	4 cut(s)	198, 277, 2018, 2458
HpyCH4III	ACNGT	9 cut(s)	242, 292, 799, 1334, 1738, 1834, 1955, 2399, 2549
HpyCH4IV	ACGT	2 cut(s)	574, 708
HpyF3I	CTNAG	9 cut(s)	197, 435, 567, 579, 660, 713, 1047, 2237, 2291
HpySE526I	ACGT	2 cut(s)	574, 708
Hsp92I	GRCGYC	1 cut(s)	2431
HspAI	GCGC	1 cut(s)	850
Ksp22I	TGATCA	1 cut(s)	1003
Kzo9I	GATC	9 cut(s)	184, 388, 582, 610, 1003, 2206, 2217, 2483, 2569
Lsp1109I	GCAGC	6 cut(s)	148, 342, 445, 557, 1375, 1489
LweI	GCATC	3 cut(s)	982, 1041, 2075
MaeI	CTAG	6 cut(s)	780, 912, 1311, 1428, 1757, 2270
MaeII	ACGT	2 cut(s)	574, 708
MaeIII	GTNAC	9 cut(s)	217, 319, 382, 1107, 1115, 1631, 1898, 2369, 2606
MalI	GATC	9 cut(s)	186, 390, 584, 612, 1005, 2208, 2219, 2485, 2571
MboI	GATC	9 cut(s)	184, 388, 582, 610, 1003, 2206, 2217, 2483, 2569
MfeI	CAATTG	1 cut(s)	1624
MflI	RGATCY	4 cut(s)	388, 582, 2206, 2217
MhlI	GDGCHC	6 cut(s)	483, 704, 1580, 1593, 2420, 2579
MlsI	TGGCCA	2 cut(s)	296, 722
MluNI	TGGCCA	2 cut(s)	296, 722
MlyI	GAGTC	6 cut(s)	671, 956, 1039, 1956, 2144, 2531
MmeI	TCCRAC	1 cut(s)	2175
Mox20I	TGGCCA	2 cut(s)	296, 722
MroXI	GAANNNNTTC	2 cut(s)	941, 1018
MscI	TGGCCA	2 cut(s)	296, 722
MseI	TTAA	7 cut(s)	39, 645, 656, 1131, 1158, 1269, 2003
MslI	CAYNNNNRTG	1 cut(s)	1208
Msp20I	TGGCCA	2 cut(s)	296, 722
MspI	CCGG	2 cut(s)	2124, 2412
MspR9I	CCNGG	6 cut(s)	693, 1170, 1347, 1572, 1748, 2413
MunI	CAATTG	1 cut(s)	1624
Mva1269I	GAATGC	2 cut(s)	319, 943
MvaI	CCWGG	5 cut(s)	693, 1170, 1347, 1572, 1748
NciI	CCSGG	1 cut(s)	2413
NdeII	GATC	9 cut(s)	184, 388, 582, 610, 1003, 2206, 2217, 2483, 2569
NlaIV	GGNNCC	9 cut(s)	17, 205, 307, 701, 702, 1064, 1178, 1890, 2219
NmeAIII	GCCGAG	2 cut(s)	2282, 2407
NsbI	TGCGCA	1 cut(s)	851
NspI	RCATGY	2 cut(s)	856, 1471
PasI	CCCWGGG	1 cut(s)	1747
PciI	ACATGT	1 cut(s)	1467
PcsI	WCGNNNNNNNCGW	1 cut(s)	1971
PctI	GAATGC	2 cut(s)	319, 943
PdmI	GAANNNNTTC	2 cut(s)	941, 1018
PfeI	GAWTC	3 cut(s)	273, 791, 1034
PflMI	CCANNNNNTGG	1 cut(s)	1391
PfoI	TCCNGGA	1 cut(s)	2411
PkrI	GCNGC	7 cut(s)	163, 357, 460, 547, 1365, 1504, 2038
PleI	GAGTC	6 cut(s)	670, 956, 1039, 1956, 2144, 2531
PpsI	GAGTC	6 cut(s)	670, 956, 1039, 1956, 2144, 2531
PpuMI	RGGWCCY	3 cut(s)	1063, 1177, 1888
PscI	ACATGT	1 cut(s)	1467
Psp124BI	GAGCTC	1 cut(s)	2420
Psp1406I	AACGTT	1 cut(s)	574
Psp5II	RGGWCCY	3 cut(s)	1063, 1177, 1888
Psp6I	CCWGG	5 cut(s)	691, 1168, 1345, 1570, 1746
PspEI	GGTNACC	1 cut(s)	1898
PspGI	CCWGG	5 cut(s)	691, 1168, 1345, 1570, 1746
PspN4I	GGNNCC	9 cut(s)	17, 205, 307, 701, 702, 1064, 1178, 1890, 2219
PspOMI	GGGCCC	1 cut(s)	700
PspPI	GGNCC	9 cut(s)	305, 700, 701, 1063, 1177, 1888, 2012, 2167, 2305
PspPPI	RGGWCCY	3 cut(s)	1063, 1177, 1888
PsuI	RGATCY	4 cut(s)	388, 582, 2206, 2217
RsaI	GTAC	9 cut(s)	639, 817, 857, 1481, 1681, 1761, 2251, 2390, 2475
RsaNI	GTAC	9 cut(s)	638, 816, 856, 1480, 1680, 1760, 2250, 2389, 2474
RseI	CAYNNNNRTG	1 cut(s)	1208
SacI	GAGCTC	1 cut(s)	2420
SaqAI	TTAA	7 cut(s)	39, 645, 656, 1131, 1158, 1269, 2003
SatI	GCNGC	7 cut(s)	162, 356, 459, 546, 1364, 1503, 2037
Sau3AI	GATC	9 cut(s)	184, 388, 582, 610, 1003, 2206, 2217, 2483, 2569
Sau96I	GGNCC	9 cut(s)	305, 700, 701, 1063, 1177, 1888, 2012, 2167, 2305
ScaI	AGTACT	2 cut(s)	817, 1761
SchI	GAGTC	6 cut(s)	671, 956, 1039, 1956, 2144, 2531
ScrFI	CCNGG	6 cut(s)	693, 1170, 1347, 1572, 1748, 2413
SduI	GDGCHC	6 cut(s)	483, 704, 1580, 1593, 2420, 2579
SfaNI	GCATC	3 cut(s)	982, 1041, 2075
SfcI	CTRYAG	1 cut(s)	2210
SinI	GGWCC	6 cut(s)	305, 1063, 1177, 1888, 2012, 2167
SmiMI	CAYNNNNRTG	1 cut(s)	1208
SmlI	CTYRAG	2 cut(s)	1798, 2077
SmoI	CTYRAG	2 cut(s)	1798, 2077
SpeI	ACTAGT	1 cut(s)	911
SsiI	CCGC	5 cut(s)	918, 2037, 2325, 2386, 2525
SspMI	CTAG	6 cut(s)	780, 912, 1311, 1428, 1757, 2270
SstI	GAGCTC	1 cut(s)	2420
StyD4I	CCNGG	6 cut(s)	691, 1168, 1345, 1570, 1746, 2411
StyI	CCWWGG	1 cut(s)	2144
TaaI	ACNGT	9 cut(s)	242, 292, 799, 1334, 1738, 1834, 1955, 2399, 2549
TaiI	ACGT	2 cut(s)	577, 711
TaqI	TCGA	2 cut(s)	665, 893
TaqII	GACCGA	1 cut(s)	935
TatI	WGTACW	7 cut(s)	637, 815, 855, 1679, 1759, 2249, 2473
TauI	GCSGC	1 cut(s)	2039
TfiI	GAWTC	3 cut(s)	273, 791, 1034
Tru1I	TTAA	7 cut(s)	39, 645, 656, 1131, 1158, 1269, 2003
Tru9I	TTAA	7 cut(s)	39, 645, 656, 1131, 1158, 1269, 2003
TseI	GCWGC	6 cut(s)	161, 355, 458, 545, 1363, 1502
TspDTI	ATGAA	8 cut(s)	17, 265, 671, 1011, 1175, 1212, 1675, 1902
TspGWI	ACGGA	2 cut(s)	1412, 1424
Van91I	CCANNNNNTGG	1 cut(s)	1391
VneI	GTGCAC	1 cut(s)	1589
VpaK11BI	GGWCC	6 cut(s)	305, 1063, 1177, 1888, 2012, 2167
XapI	RAATTY	7 cut(s)	121, 178, 229, 884, 1439, 1538, 2111
XceI	RCATGY	2 cut(s)	856, 1471
XmiI	GTMKAC	1 cut(s)	1163
XmnI	GAANNNNTTC	2 cut(s)	941, 1018
XspI	CTAG	6 cut(s)	780, 912, 1311, 1428, 1757, 2270
ZrmI	AGTACT	2 cut(s)	817, 1761

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.