MD02G1131900.v1.1

DNA-(Apurinic or apyrimidinic site) lyase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
10627482 .. 10631859
4378 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1131900.v1.1.491

Sequence Viewer

Length: 1818 bp
ATGAAGATAGTGACGTACAACGTGAACGGTCTGCGGCCGCGCATTGCCCAGTTCGGCTCTCTGCTCAAATTGCTGAATTCATTGGGCGCCGACGTCATCTGCTTCCAGGAAACCAAGCTGCGACGGCAGGAATTGACCGCCGACTTGGTCATGGCGGAGGGCTACGAGTCCTTTTTCTCCTGCACCCGCACCTCCGAAAGAGGCCGCACCGGGTACTCCGGTGTGGCGACGTTTTGCCGGGTGAATTCGGCGTTCTCGAGTGACGAAGTGGCGTTGCCGGTGGTGGCCGAGGAAGGATTCACTGGGGTTCTTGACAGTGGGAAAGGAGAAATGAATGCGGTTGCGGAGGGGCTTGAGGAGTTTTCGAGAGATGAGCTACTGAAGGTTGATGGCGAGGGGCGTTGTGTTATCACGGATCATGGGCATTTTGTTCTCTTCAATTTGTATGGGCCTCGAGCGGGGGGTGATGATACGGAAAGGATCGAGTTTAAGTTAAAGTTTTTCAAGATCTTAGAGAAAAGGTGGGAGTCTCTCCTGCGTCAGGGGAGGCGGATATTTGTTGTTGGTGATCTTAACATTGCACCCACTTCATTAGACCGTTGTGATGCGCAACCAGATTTTGAGAACAACCAATTTAGAAGATGGTTTAGATCGATGTTGGTGGAAAATGGAGGCTCCTTCTTTGATGTTTTCAGGGCAAAGAATCCTGATAGAAGAGAAGCATACACATGCTGGTCACAAAGTTCAGGTGCTGAAGAATTTAATTATGGCTCTAGAATCGACCACATTCTGTGTGCAGGGGTATGCTTACACCAAGAGCAGGACTTGCAAAGCCATAACTTTGTAACTTGCCATGTCAAGGAATGTGACATATTGACACAATTTAAACGGTGGAAACCTGGAAATTCACTGAGGTGGAAGGGAGGGCAGAACATCAAACTCGAAGGCTCTGATCATGCTCCAGTTTACACAAGTTTACTGGAAATTCCTAGTGTTTCCCAGCATAGCACCCCATCTTTATCTGCTAGATACATTCCAATGGTTCGAGGTCTCCAACAAACCATTGTGTCGTTACTAATTAAAAGACAAGCTGCTGAACAAGTTACTACGGATGAAAATTTCATTAAAGAGAGTTCCACTGAGGGAGAAAGAATATCCCCTGACCAATGTTGCACACCCGGTGCACCTAGTGGCGACTCCTGTTCTTCGAGCCAAAACTCTGAAGTTCTATGTTCAAAAATATACGAGCATTCAAGCACTTTTGCTAATGAGGCCACTTGTAACACCTTGGTAACATTAGGTGGTGAACGTAAAAAAACAATGTGCAGCAATGAAGCTAAGAAAAAAGCAAAAAGGAGCTCCCAACTCTCATTGAGGTCATTTTTCCAGAAAAGTCCGATCACTAGCAACAGTGTGAGCAGCAGTAGTGTTATTTCTAGTAAGGGAAATTTTCCAGATTCTAATCATCTCTCAAATGAAACTCCAGTACCAGAAAATCAAAGTGGCAGTCCCAAGCAGTGTGAACTGAACTCAAGTGCATCAATTCAGGATAGCGATGAAGTAGATGTCTACTCTTTGGACAAAGAGAAGAATAATTTTGCGTTATTGGAGTGGCAAAGGTTACAGCAAGTCATGCAGAATAGCATACCACTTTGCAAGCGTCATAGTGAACCTTGTGTTGCTCGGGTTGTGAGGAAGCGAGGTCCTAATTTTGGACGCAGATTTTATGTCTGTGCACGTGCTGAGGGACCTGCATCTAATCCTGAAGCAAATTGTAATTATTTCAAATGGGCTTCCTCAAAACCTCGACAGAAATGA

Protein Analysis

606

Amino Acids

67.68

Weight (kDa)

7.97

Isoelectric Point (pI)

49.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 4 - 267 4e-21 Endonuclease/Exonuclease/phosphatase family
Zn_ribbon_GRF PF06839 550 - 600 5.7e-13 GRF zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 96
Acc16I TGCGCA 1 cut(s) 609
Acc36I ACCTGC 1 cut(s) 1759
AccB1I GGYRCC 1 cut(s) 86
AccBSI CCGCTC 1 cut(s) 458
AccI GTMKAC 1 cut(s) 1569
AccII CGCG 1 cut(s) 40
AclWI GGATC 2 cut(s) 423, 488
AcoI YGGCCR 2 cut(s) 35, 285
AcsI RAATTY 7 cut(s) 76, 244, 758, 904, 984, 1117, 1447
AcuI CTGAAG 4 cut(s) 401, 774, 1242, 1785
AcvI CACGTG 1 cut(s) 1739
AcyI GRCGYC 2 cut(s) 87, 93
AdeI CACNNNGTG 2 cut(s) 1181, 1190
AfaI GTAC 3 cut(s) 17, 215, 1488
AfiI CCNNNNNNNGG 5 cut(s) 458, 541, 820, 859, 1712
AgsI TTSAA 5 cut(s) 439, 505, 1236, 1254, 1786
AjnI CCWGG 2 cut(s) 105, 898
AleI CACNNNNGTG 1 cut(s) 913
AluBI AGCT 5 cut(s) 118, 376, 1091, 1337, 1359
AluI AGCT 5 cut(s) 118, 376, 1091, 1337, 1359
Alw21I GWGCWC 3 cut(s) 1186, 1361, 1738
Alw26I GTCTC 2 cut(s) 534, 1055
Alw44I GTGCAC 2 cut(s) 1182, 1734
AlwI GGATC 2 cut(s) 423, 488
AlwNI CAGNNNCTG 1 cut(s) 752
Ama87I CYCGRG 3 cut(s) 256, 453, 1683
AoxI GGCC 5 cut(s) 35, 202, 285, 449, 1272
ApaLI GTGCAC 2 cut(s) 1182, 1734
ApeKI GCWGC 4 cut(s) 118, 1091, 1326, 1419
ApoI RAATTY 7 cut(s) 76, 244, 758, 904, 984, 1117, 1447
ArsI GACNNNNNNTTYG 2 cut(s) 1492, 1524
AspLEI GCGC 3 cut(s) 42, 89, 610
AspS9I GGNCC 3 cut(s) 449, 1703, 1748
AsuC2I CCSGG 3 cut(s) 211, 239, 1179
AsuHPI GGTGA 4 cut(s) 253, 476, 578, 1316
AvaI CYCGRG 3 cut(s) 256, 453, 1683
AvaII GGWCC 2 cut(s) 1703, 1748
BaeGI GKGCMC 2 cut(s) 1186, 1738
BaeI ACNNNNGTAYC 4 cut(s) 205, 238, 1470, 1503
BanI GGYRCC 1 cut(s) 86
BanII GRGCYC 1 cut(s) 1361
BbrPI CACGTG 1 cut(s) 1739
Bbv12I GWGCWC 3 cut(s) 1186, 1361, 1738
BbvCI CCTCAGC 1 cut(s) 1743
BbvI GCAGC 4 cut(s) 105, 1078, 1338, 1431
BccI CCATC 3 cut(s) 383, 636, 1021
BceAI ACGGC 1 cut(s) 140
BciT130I CCWGG 2 cut(s) 107, 900
BclI TGATCA 1 cut(s) 952
BcnI CCSGG 3 cut(s) 211, 239, 1179
BcoDI GTCTC 2 cut(s) 534, 1055
BfaI CTAG 6 cut(s) 774, 990, 1026, 1188, 1404, 1437
BfoI RGCGCY 1 cut(s) 90
BfuAI ACCTGC 1 cut(s) 1759
BglII AGATCT 1 cut(s) 507
BisI GCNGC 7 cut(s) 35, 38, 119, 205, 1092, 1327, 1420
BlsI GCNGC 7 cut(s) 36, 39, 120, 206, 1093, 1328, 1421
Bme1390I CCNGG 5 cut(s) 107, 211, 239, 900, 1179
Bme18I GGWCC 2 cut(s) 1703, 1748
BmeT110I CYCGRG 3 cut(s) 256, 453, 1683
BmgT120I GGNCC 3 cut(s) 449, 1703, 1748
BmiI GGNNCC 3 cut(s) 88, 676, 1749
BmrFI CCNGG 5 cut(s) 107, 211, 239, 900, 1179
BmrI ACTGGG 2 cut(s) 43, 312
BmsI GCATC 3 cut(s) 595, 1547, 1763
BmuI ACTGGG 2 cut(s) 43, 312
BpmI CTGGAG 2 cut(s) 945, 1467
Bpu10I CCTNAGC 1 cut(s) 1743
BpuEI CTTGAG 2 cut(s) 374, 1516
BpuMI CCSGG 3 cut(s) 211, 239, 1179
Bsa29I ATCGAT 1 cut(s) 653
BsaAI YACGTR 1 cut(s) 1739
BsaBI GATNNNNATC 1 cut(s) 1461
BsaHI GRCGYC 2 cut(s) 87, 93
BsaI GGTCTC 1 cut(s) 1055
BsaJI CCNNGG 2 cut(s) 288, 1287
BsaWI WCCGGW 1 cut(s) 218
Bsc4I CCNNNNNNNGG 5 cut(s) 458, 541, 820, 859, 1712
Bse118I RCCGGY 1 cut(s) 277
Bse1I ACTGG 5 cut(s) 49, 307, 962, 984, 1484
Bse3DI GCAATG 3 cut(s) 42, 576, 1336
Bse8I GATNNNNATC 1 cut(s) 1461
BseBI CCWGG 2 cut(s) 107, 900
BseCI ATCGAT 1 cut(s) 653
BseDI CCNNGG 2 cut(s) 288, 1287
BseGI GGATG 1 cut(s) 1117
BseJI GATNNNNATC 1 cut(s) 1461
BseLI CCNNNNNNNGG 5 cut(s) 458, 541, 820, 859, 1712
BseMI GCAATG 3 cut(s) 42, 576, 1336
BseMII CTCAG 3 cut(s) 902, 1131, 1734
BseNI ACTGG 5 cut(s) 49, 307, 962, 984, 1484
BseRI GAGGAG 1 cut(s) 371
BseSI GKGCMC 2 cut(s) 1186, 1738
BseX3I CGGCCG 1 cut(s) 35
BseXI GCAGC 4 cut(s) 105, 1078, 1338, 1431
BseYI CCCAGC 1 cut(s) 999
BsgI GTGCAG 3 cut(s) 166, 816, 1345
Bsh1236I CGCG 1 cut(s) 40
Bsh1285I CGRYCG 1 cut(s) 38
BshFI GGCC 5 cut(s) 37, 204, 287, 451, 1274
BshNI GGYRCC 1 cut(s) 86
BshVI ATCGAT 1 cut(s) 653
BsiEI CGRYCG 1 cut(s) 38
BsiHKAI GWGCWC 3 cut(s) 1186, 1361, 1738
BsiHKCI CYCGRG 3 cut(s) 256, 453, 1683
BsiSI CCGG 5 cut(s) 210, 219, 238, 278, 1179
BslFI GGGAC 2 cut(s) 1494, 1761
BslI CCNNNNNNNGG 5 cut(s) 458, 541, 820, 859, 1712
BsmAI GTCTC 2 cut(s) 534, 1055
BsmFI GGGAC 2 cut(s) 1494, 1761
BsmI GAATGC 2 cut(s) 340, 1249
BsnI GGCC 5 cut(s) 37, 204, 287, 451, 1274
Bso31I GGTCTC 1 cut(s) 1055
BsoBI CYCGRG 3 cut(s) 256, 453, 1683
Bsp1286I GDGCHC 3 cut(s) 1186, 1361, 1738
Bsp143I GATC 7 cut(s) 415, 480, 507, 568, 650, 952, 1398
BspANI GGCC 5 cut(s) 37, 204, 287, 451, 1274
BspCNI CTCAG 3 cut(s) 903, 1132, 1735
BspDI ATCGAT 1 cut(s) 653
BspFNI CGCG 1 cut(s) 40
BspLI GGNNCC 3 cut(s) 88, 676, 1749
BspMI ACCTGC 1 cut(s) 1759
BspPI GGATC 2 cut(s) 423, 488
BspT107I GGYRCC 1 cut(s) 86
BspTNI GGTCTC 1 cut(s) 1055
BsrBI CCGCTC 1 cut(s) 458
BsrDI GCAATG 3 cut(s) 42, 576, 1336
BsrFI RCCGGY 1 cut(s) 277
BsrI ACTGG 5 cut(s) 49, 307, 962, 984, 1484
BssAI RCCGGY 1 cut(s) 277
BssECI CCNNGG 2 cut(s) 288, 1287
BssMI GATC 7 cut(s) 415, 480, 507, 568, 650, 952, 1398
BssNI GRCGYC 2 cut(s) 87, 93
BssT1I CCWWGG 1 cut(s) 1287
Bst2UI CCWGG 2 cut(s) 107, 900
Bst4CI ACNGT 5 cut(s) 29, 317, 599, 891, 1412
Bst6I CTCTTC 2 cut(s) 440, 709
BstACI GRCGYC 2 cut(s) 87, 93
BstAPI GCANNNNNTGC 2 cut(s) 826, 1633
BstBAI YACGTR 1 cut(s) 1739
BstC8I GCNNGC 1 cut(s) 1658
BstDEI CTNAG 5 cut(s) 511, 911, 1140, 1338, 1743
BstENI CCTNNNNNAGG 1 cut(s) 539
BstF5I GGATG 1 cut(s) 1117
BstFNI CGCG 1 cut(s) 40
BstH2I RGCGCY 1 cut(s) 90
BstHHI GCGC 3 cut(s) 42, 89, 610
BstKTI GATC 7 cut(s) 418, 483, 510, 571, 653, 955, 1401
BstMAI GTCTC 2 cut(s) 534, 1055
BstMBI GATC 7 cut(s) 415, 480, 507, 568, 650, 952, 1398
BstMCI CGRYCG 1 cut(s) 38
BstMWI GCNNNNNNNGC 5 cut(s) 70, 124, 826, 1271, 1633
BstNI CCWGG 2 cut(s) 107, 900
BstNSI RCATGY 1 cut(s) 732
BstSCI CCNGG 5 cut(s) 105, 209, 237, 898, 1177
BstSLI GKGCMC 2 cut(s) 1186, 1738
BstUI CGCG 1 cut(s) 40
BstV1I GCAGC 4 cut(s) 105, 1078, 1338, 1431
BstX2I RGATCY 1 cut(s) 507
BstYI RGATCY 1 cut(s) 507
BstZI CGGCCG 1 cut(s) 35
Bsu15I ATCGAT 1 cut(s) 653
BsuRI GGCC 5 cut(s) 37, 204, 287, 451, 1274
BsuTUI ATCGAT 1 cut(s) 653
BtgZI GCGATG 1 cut(s) 1569
BtsCI GGATG 1 cut(s) 1117
BtsI GCAGTG 1 cut(s) 1523
BtsIMutI CAGTG 6 cut(s) 300, 322, 908, 1137, 1417, 1523
BveI ACCTGC 1 cut(s) 1759
Cac8I GCNNGC 1 cut(s) 1658
CaiI CAGNNNCTG 1 cut(s) 752
CciNI GCGGCCGC 1 cut(s) 35
CfoI GCGC 3 cut(s) 42, 89, 610
Cfr10I RCCGGY 1 cut(s) 277
Cfr13I GGNCC 3 cut(s) 449, 1703, 1748
ClaI ATCGAT 1 cut(s) 653
CseI GACGC 3 cut(s) 527, 1649, 1725
Csp6I GTAC 3 cut(s) 16, 214, 1487
CviAII CATG 6 cut(s) 151, 419, 729, 854, 956, 1633
CviQI GTAC 3 cut(s) 16, 214, 1487
DdeI CTNAG 5 cut(s) 511, 911, 1140, 1338, 1743
DinI GGCGCC 1 cut(s) 88
DpnI GATC 7 cut(s) 417, 482, 509, 570, 652, 954, 1400
DpnII GATC 7 cut(s) 415, 480, 507, 568, 650, 952, 1398
DraI TTTAAA 1 cut(s) 886
DraIII CACNNNGTG 2 cut(s) 1181, 1190
EaeI YGGCCR 2 cut(s) 35, 285
EagI CGGCCG 1 cut(s) 35
Eam1104I CTCTTC 2 cut(s) 440, 709
EarI CTCTTC 2 cut(s) 440, 709
EciI GGCGGA 2 cut(s) 170, 565
Ecl136II GAGCTC 1 cut(s) 1359
EclXI CGGCCG 1 cut(s) 35
Eco130I CCWWGG 1 cut(s) 1287
Eco24I GRGCYC 1 cut(s) 1361
Eco31I GGTCTC 1 cut(s) 1055
Eco47I GGWCC 2 cut(s) 1703, 1748
Eco52I CGGCCG 1 cut(s) 35
Eco53kI GAGCTC 1 cut(s) 1359
Eco57I CTGAAG 4 cut(s) 401, 774, 1242, 1785
Eco72I CACGTG 1 cut(s) 1739
Eco88I CYCGRG 3 cut(s) 256, 453, 1683
EcoICRI GAGCTC 1 cut(s) 1359
EcoNI CCTNNNNNAGG 1 cut(s) 539
EcoO109I RGGNCCY 2 cut(s) 1703, 1748
EcoRI GAATTC 2 cut(s) 76, 244
EcoRII CCWGG 2 cut(s) 105, 898
EcoT14I CCWWGG 1 cut(s) 1287
EcoT38I GRGCYC 1 cut(s) 1361
EgeI GGCGCC 1 cut(s) 88
EheI GGCGCC 1 cut(s) 88
ErhI CCWWGG 1 cut(s) 1287
FaeI CATG 6 cut(s) 154, 422, 732, 857, 959, 1636
FaqI GGGAC 2 cut(s) 1494, 1761
FatI CATG 6 cut(s) 150, 418, 728, 853, 955, 1632
FauI CCCGC 2 cut(s) 194, 451
FbaI TGATCA 1 cut(s) 952
FblI GTMKAC 1 cut(s) 1569
Fnu4HI GCNGC 7 cut(s) 35, 38, 119, 205, 1092, 1327, 1420
FokI GGATG 1 cut(s) 1124
FriOI GRGCYC 1 cut(s) 1361
Fsp4HI GCNGC 7 cut(s) 35, 38, 119, 205, 1092, 1327, 1420
FspBI CTAG 6 cut(s) 774, 990, 1026, 1188, 1404, 1437
FspI TGCGCA 1 cut(s) 609
GlaI GCGC 3 cut(s) 41, 88, 609
GluI GCNGC 7 cut(s) 35, 38, 119, 205, 1092, 1327, 1420
GsaI CCCAGC 1 cut(s) 1003
GsuI CTGGAG 2 cut(s) 945, 1467
HaeII RGCGCY 1 cut(s) 90
HaeIII GGCC 5 cut(s) 37, 204, 287, 451, 1274
HapII CCGG 5 cut(s) 210, 219, 238, 278, 1179
HgaI GACGC 3 cut(s) 527, 1649, 1725
HhaI GCGC 3 cut(s) 42, 89, 610
Hin1I GRCGYC 2 cut(s) 87, 93
Hin1II CATG 6 cut(s) 154, 422, 732, 857, 959, 1636
Hin6I GCGC 3 cut(s) 40, 87, 608
HinP1I GCGC 3 cut(s) 40, 87, 608
HinfI GANTC 7 cut(s) 167, 297, 527, 703, 777, 1196, 1457
HpaII CCGG 5 cut(s) 210, 219, 238, 278, 1179
HphI GGTGA 4 cut(s) 253, 476, 578, 1316
Hpy166II GTNNAC 9 cut(s) 25, 967, 977, 1184, 1307, 1523, 1570, 1670, 1736
Hpy188I TCNGA 4 cut(s) 196, 952, 1222, 1398
Hpy8I GTNNAC 9 cut(s) 25, 967, 977, 1184, 1307, 1523, 1570, 1670, 1736
Hpy99I CGWCG 3 cut(s) 95, 126, 232
HpyAV CCTTC 5 cut(s) 287, 376, 688, 913, 938
HpyCH4III ACNGT 5 cut(s) 29, 317, 599, 891, 1412
HpyCH4IV ACGT 6 cut(s) 14, 21, 93, 230, 1309, 1738
HpyF10VI GCNNNNNNNGC 5 cut(s) 70, 124, 826, 1271, 1633
HpyF3I CTNAG 5 cut(s) 511, 911, 1140, 1338, 1743
HpySE526I ACGT 6 cut(s) 14, 21, 93, 230, 1309, 1738
Hsp92I GRCGYC 2 cut(s) 87, 93
Hsp92II CATG 6 cut(s) 154, 422, 732, 857, 959, 1636
HspAI GCGC 3 cut(s) 40, 87, 608
KasI GGCGCC 1 cut(s) 86
Ksp22I TGATCA 1 cut(s) 952
Kzo9I GATC 7 cut(s) 415, 480, 507, 568, 650, 952, 1398
LmnI GCTCC 4 cut(s) 680, 964, 1356, 1364
Lsp1109I GCAGC 4 cut(s) 105, 1078, 1338, 1431
LweI GCATC 3 cut(s) 595, 1547, 1763
MaeI CTAG 6 cut(s) 774, 990, 1026, 1188, 1404, 1437
MaeII ACGT 6 cut(s) 14, 21, 93, 230, 1309, 1738
MalI GATC 7 cut(s) 417, 482, 509, 570, 652, 954, 1400
MbiI CCGCTC 1 cut(s) 458
MboI GATC 7 cut(s) 415, 480, 507, 568, 650, 952, 1398
MboII GAAGA 7 cut(s) 16, 427, 651, 726, 767, 1197, 1600
MflI RGATCY 1 cut(s) 507
MhlI GDGCHC 3 cut(s) 1186, 1361, 1738
Mly113I GGCGCC 1 cut(s) 87
MlyI GAGTC 3 cut(s) 176, 536, 1190
MmeI TCCRAC 1 cut(s) 1078
MseI TTAA 7 cut(s) 489, 494, 573, 762, 885, 1080, 1125
MslI CAYNNNNRTG 3 cut(s) 727, 913, 1037
MspI CCGG 5 cut(s) 210, 219, 238, 278, 1179
MspR9I CCNGG 5 cut(s) 107, 211, 239, 900, 1179
Mva1269I GAATGC 2 cut(s) 340, 1249
MvaI CCWGG 2 cut(s) 107, 900
MvnI CGCG 1 cut(s) 40
MwoI GCNNNNNNNGC 5 cut(s) 70, 124, 826, 1271, 1633
NarI GGCGCC 1 cut(s) 87
NciI CCSGG 3 cut(s) 211, 239, 1179
NdeII GATC 7 cut(s) 415, 480, 507, 568, 650, 952, 1398
NlaIII CATG 6 cut(s) 154, 422, 732, 857, 959, 1636
NlaIV GGNNCC 3 cut(s) 88, 676, 1749
NmeAIII GCCGAG 1 cut(s) 313
NmuCI GTSAC 4 cut(s) 10, 260, 735, 866
NotI GCGGCCGC 1 cut(s) 35
NsbI TGCGCA 1 cut(s) 609
NspI RCATGY 1 cut(s) 732
OliI CACNNNNGTG 1 cut(s) 913
PaeR7I CTCGAG 2 cut(s) 256, 453
PcsI WCGNNNNNNNCGW 1 cut(s) 254
PctI GAATGC 2 cut(s) 340, 1249
PfeI GAWTC 4 cut(s) 297, 703, 777, 1457
PflFI GACNNNGTC 1 cut(s) 146
PfoI TCCNGGA 1 cut(s) 105
PkrI GCNGC 7 cut(s) 36, 39, 120, 206, 1093, 1328, 1421
PleI GAGTC 3 cut(s) 175, 535, 1190
PluTI GGCGCC 1 cut(s) 90
PmaCI CACGTG 1 cut(s) 1739
PmlI CACGTG 1 cut(s) 1739
PpsI GAGTC 3 cut(s) 175, 535, 1190
Ppu21I YACGTR 1 cut(s) 1739
PpuMI RGGWCCY 2 cut(s) 1703, 1748
Psp124BI GAGCTC 1 cut(s) 1361
Psp5II RGGWCCY 2 cut(s) 1703, 1748
Psp6I CCWGG 2 cut(s) 105, 898
PspCI CACGTG 1 cut(s) 1739
PspFI CCCAGC 1 cut(s) 999
PspGI CCWGG 2 cut(s) 105, 898
PspN4I GGNNCC 3 cut(s) 88, 676, 1749
PspPI GGNCC 3 cut(s) 449, 1703, 1748
PspPPI RGGWCCY 2 cut(s) 1703, 1748
PspXI VCTCGAGB 1 cut(s) 453
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 1 cut(s) 507
PsyI GACNNNGTC 1 cut(s) 146
RsaI GTAC 3 cut(s) 17, 215, 1488
RsaNI GTAC 3 cut(s) 16, 214, 1487
RseI CAYNNNNRTG 3 cut(s) 727, 913, 1037
SacI GAGCTC 1 cut(s) 1361
SaqAI TTAA 7 cut(s) 489, 494, 573, 762, 885, 1080, 1125
SatI GCNGC 7 cut(s) 35, 38, 119, 205, 1092, 1327, 1420
Sau3AI GATC 7 cut(s) 415, 480, 507, 568, 650, 952, 1398
Sau96I GGNCC 3 cut(s) 449, 1703, 1748
SchI GAGTC 3 cut(s) 176, 536, 1190
ScrFI CCNGG 5 cut(s) 107, 211, 239, 900, 1179
SduI GDGCHC 3 cut(s) 1186, 1361, 1738
SfaNI GCATC 3 cut(s) 595, 1547, 1763
SfoI GGCGCC 1 cut(s) 88
Sfr274I CTCGAG 2 cut(s) 256, 453
SinI GGWCC 2 cut(s) 1703, 1748
SlaI CTCGAG 2 cut(s) 256, 453
SmiMI CAYNNNNRTG 3 cut(s) 727, 913, 1037
SmlI CTYRAG 4 cut(s) 256, 353, 453, 1531
SmoI CTYRAG 4 cut(s) 256, 353, 453, 1531
SspDI GGCGCC 1 cut(s) 86
SspMI CTAG 6 cut(s) 774, 990, 1026, 1188, 1404, 1437
SstI GAGCTC 1 cut(s) 1361
StyD4I CCNGG 5 cut(s) 105, 209, 237, 898, 1177
StyI CCWWGG 1 cut(s) 1287
TaaI ACNGT 5 cut(s) 29, 317, 599, 891, 1412
TaiI ACGT 6 cut(s) 17, 24, 96, 233, 1312, 1741
TauI GCSGC 3 cut(s) 37, 40, 207
TfiI GAWTC 4 cut(s) 297, 703, 777, 1457
Tru1I TTAA 7 cut(s) 489, 494, 573, 762, 885, 1080, 1125
Tru9I TTAA 7 cut(s) 489, 494, 573, 762, 885, 1080, 1125
TscAI CASTG 6 cut(s) 307, 322, 915, 1144, 1417, 1523
TseFI GTSAC 4 cut(s) 10, 260, 735, 866
TseI GCWGC 4 cut(s) 118, 1091, 1326, 1419
Tsp45I GTSAC 4 cut(s) 10, 260, 735, 866
TspDTI ATGAA 9 cut(s) 17, 69, 347, 579, 1111, 1128, 1347, 1491, 1572
TspGWI ACGGA 3 cut(s) 428, 488, 1124
TspRI CASTG 6 cut(s) 307, 322, 915, 1144, 1417, 1523
Tth111I GACNNNGTC 1 cut(s) 146
VneI GTGCAC 2 cut(s) 1182, 1734
VpaK11BI GGWCC 2 cut(s) 1703, 1748
XagI CCTNNNNNAGG 1 cut(s) 539
XapI RAATTY 7 cut(s) 76, 244, 758, 904, 984, 1117, 1447
XbaI TCTAGA 1 cut(s) 773
XceI RCATGY 1 cut(s) 732
XhoI CTCGAG 2 cut(s) 256, 453
XmiI GTMKAC 1 cut(s) 1569
XspI CTAG 6 cut(s) 774, 990, 1026, 1188, 1404, 1437
ZraI GACGTC 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.