Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006766

Physical Location & Seq

Genomic Coordinates Forward (+)

81152942 .. 81157575

Gene Structure 4634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00143120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGAAGATCGTGACGTACAACGTCAACGGCCTGAGGCCGCGGATCGCACAGTTCGGCTCTCTTCTGAAATTGCTGAATTCTTTGGACGCTGACGTCATTTGCTTCCAGGAAACCAAACTGAGGCGGCAGGAATTGACCGCCGATTTGGTAATGGCGGAAGGCTACGAGTCGTTCTTCTCCTGCACCCGGACCTCCGAACGAGGCCGTGCTGGTTATTCCGGTGTGGCTACGTTTTGTCGGGTCAAGTCGGCGTTTAATAGTGATGAGGTGGCGTTGCCGGTGGCGGCGGAGGAAGGGTTCAGTGGTTTGCTCGGAGAATTGGATACGGTGGCAGAAGGGCTTGAGGAGTTTTCAAAAGAGGAGCTTCTTCAGGTTGATGGAGAGGGACGGTGTGTTGTTACTGATCATCATCATTTTGTTCTATTCAATTTGTATGGACCAAGAGCTGGAGGTGACGATACAGAAAGGATCGAGTTTAAGCTCAATTTTTATAAGATGTTGCAGAAAAGATGGGAGTCTCTCTTGCGTCAGGGGAGGAGGATAATTGTAGTTGGTGATCTGAACATTGCACCCACTTGCTTAGATCGTTGTGAAGCAGAACCAGAATTTGAGAACAATCAATTCAGAAGATGGTTTAGATCCATGTTAGTGGAGAATAGAGGATCTTTCTTTGATGCTTTCAGAGCAAAACATCCTGATAGAAGAGAAGCATACACATGCTGGTCACAAAGTAGTGGTGCTGAAGAATTTAATTATGGCTCCAGAATCGATCACATTCTTTGTGCTGGTTTATGTCTTCACCAAGAGCAGGACCTTGAAAACCATAACTTTGTAGCTTGCCATGTCAAGGAGTGTGACATATTGACACAATATAAACGGTGGAAACCAGGAAATTCTCTGAGGTGGAAGGGAGGGCAGAGGAGTATCAAACTTGAAGGCTCCGATCATGCACCTGTTTACACAAGTTTACTGGAATTGCCTAATATCTGCCAGCATAGCACCCCACGTTTATCTGCTAGATATATTCCAATGGTTCGTGGTCTCCAGCAAACCCTTGTATCATTGTTAATGAAAAGAAAAGTTTCTGAACAAGTGGATGAAATTAACATTAAAGAGAGTTGTAGCGAGACAGAGACAAGCTCGCCTGACCAATGTGGCACACCCTGTTCTTCCTCGAGCCGAGACTTTGGATTTCTCAGTTCAAGAACAATTGAGTGTTCCAGCGGTTTTGCTAATGAGGCTGCTTGTAACACTTTAGTTACTTTAAGTAGTGAACCTACCAAAAGAAGGCCAGGGAATGAAACCAAGAAAAAAGCAAAAGGCAGTCAATTGTCCCAACTCTCATTGAGATCATTTTTCCAGAAAAGTTCAATCCCTAGCAAGAGCTACCGTGCAGACACTGGGACTGAATCAACTCAGATAGATATTTCAGAATCTAATCATCTGCCAAATGAAACTCCCATGCCGGCGAATCAAAGTGGCAGTGTAGAGCAGTGTGTATTGCACTCAAGCGCATCAATTCAGGATGCGGATCAAGATGAACTCGCTGCTTGTTCTTTGAAGAAAGAGAAGAATAGTTTAGCTTTACTGGAGTGGCAAAGGTTACAGCAAGTCATGCAGAATAGCATTCCACTTTGCAAGGGTCATCGAGAACCTTGTGTTCCTCGGGTTGTGAAGAAACAAGGTCCTAATTTTGGTCGCAGATTTTATGTTTGTGCACGTGCTGAGGGACCTGCATCAAATCCTGAAGCAAATTGTAATTATTTCAAATGGGCCGCTTCGAAACCTCGAAACAACAAAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0003674 GO:0003824 GO:0003906 GO:0004518 GO:0004527 GO:0004529 GO:0004536 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008296 GO:0008309 GO:0008311 GO:0008408 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0016796 GO:0016895 GO:0019866 GO:0031090 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

Exo_endo_phos zf-GRF

Protein Analysis

601

Amino Acids

67.56

Weight (kDa)

7.73

Isoelectric Point (pI)

53.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	4 - 263	1.8e-20	Endonuclease/Exonuclease/phosphatase family
Zn_ribbon_GRF	PF06839	544 - 593	1.5e-12	GRF zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36050 AT4G36050 AT4G36050 AT4G36050 AT4G36050
fragaria_vesca	FvH4_1g11761 FvH4_1g11761 FvH4_1g11761 FvH4_1g11761 FvH4_1g11761
malus_domestica	MD02G1131900.v1.1
prunus_persica	Prupe.7G168600_v2.0.a1 Prupe.7G168600_v2.0.a1 Prupe.7G168600_v2.0.a1
pyrus_communis	pycom02g10280
rosa_chinensis	RchiOBHm_Chr2g0099381
rosa_laevigata	RLG00000016877
rosa_multiflora	Rmu_sc0002487.1_g000007
rosa_roxburghii	Rroxscaffold_2G00143120
rosa_rugosa	Rorug02G0079000 Rorug02G0079100
rosa_samantha	Rh2AG129000 Rh2BG132000 Rh2CG132800 Rh2DG133000
rosa_wichuraiana	Rw2G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	492
AasI	GACNNNNNNGTC	1 cut(s)	92
AatII	GACGTC	1 cut(s)	96
Acc36I	ACCTGC	1 cut(s)	1741
AccB7I	CCANNNNNTGG	1 cut(s)	446
AccII	CGCG	1 cut(s)	40
AclWI	GGATC	5 cut(s)	50, 476, 633, 670, 1539
AcsI	RAATTY	4 cut(s)	76, 605, 746, 892
AcuI	CTGAAG	3 cut(s)	353, 762, 1767
AcvI	CACGTG	1 cut(s)	1721
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	1 cut(s)	17
AfiI	CCNNNNNNNGG	7 cut(s)	120, 186, 446, 808, 847, 1287, 1694
AgsI	TTSAA	8 cut(s)	354, 427, 818, 935, 1203, 1371, 1561, 1768
AjnI	CCWGG	3 cut(s)	105, 886, 1291
AloI	GAACNNNNNNTCC	2 cut(s)	281, 313
AluBI	AGCT	7 cut(s)	364, 446, 481, 836, 1140, 1386, 1583
AluI	AGCT	7 cut(s)	364, 446, 481, 836, 1140, 1386, 1583
Alw21I	GWGCWC	1 cut(s)	1720
Alw26I	GTCTC	5 cut(s)	522, 1046, 1121, 1127, 1176
Alw44I	GTGCAC	1 cut(s)	1716
AlwI	GGATC	5 cut(s)	50, 476, 633, 670, 1539
AlwNI	CAGNNNCTG	1 cut(s)	1400
Ama87I	CYCGRG	2 cut(s)	1174, 1665
AoxI	GGCC	5 cut(s)	28, 35, 202, 1289, 1773
ApaLI	GTGCAC	1 cut(s)	1716
ApeKI	GCWGC	2 cut(s)	1241, 1547
ApoI	RAATTY	4 cut(s)	76, 605, 746, 892
ArsI	GACNNNNNNTTYG	2 cut(s)	127, 159
Asp700I	GAANNNNTTC	1 cut(s)	1081
AspLEI	GCGC	1 cut(s)	1514
AspS9I	GGNCC	6 cut(s)	189, 437, 811, 1685, 1730, 1773
AsuC2I	CCSGG	1 cut(s)	187
AsuHPI	GGTGA	3 cut(s)	464, 566, 791
AsuII	TTCGAA	1 cut(s)	1781
AvaI	CYCGRG	2 cut(s)	1174, 1665
AvaII	GGWCC	5 cut(s)	189, 437, 811, 1685, 1730
AxyI	CCTNAGG	1 cut(s)	32
BaeGI	GKGCMC	1 cut(s)	1720
BaeI	ACNNNNGTAYC	2 cut(s)	1041, 1074
BbrPI	CACGTG	1 cut(s)	1721
BbsI	GAAGAC	1 cut(s)	788
Bbv12I	GWGCWC	1 cut(s)	1720
BbvCI	CCTCAGC	1 cut(s)	1725
BbvI	GCAGC	2 cut(s)	1228, 1534
BccI	CCATC	3 cut(s)	371, 504, 624
BceAI	ACGGC	2 cut(s)	43, 189
BciT130I	CCWGG	3 cut(s)	107, 888, 1293
BciVI	GTATCC	1 cut(s)	316
BclI	TGATCA	1 cut(s)	403
BcnI	CCSGG	1 cut(s)	187
BcoDI	GTCTC	5 cut(s)	522, 1046, 1121, 1127, 1176
BfaI	CTAG	2 cut(s)	1017, 1377
BfuAI	ACCTGC	1 cut(s)	1741
BfuI	GTATCC	1 cut(s)	316
BisI	GCNGC	6 cut(s)	38, 125, 285, 1242, 1548, 1776
BlsI	GCNGC	6 cut(s)	39, 126, 286, 1243, 1549, 1777
Bme1390I	CCNGG	4 cut(s)	107, 187, 888, 1293
Bme18I	GGWCC	5 cut(s)	189, 437, 811, 1685, 1730
BmeT110I	CYCGRG	2 cut(s)	1174, 1665
BmgT120I	GGNCC	6 cut(s)	189, 437, 811, 1685, 1730, 1773
BmiI	GGNNCC	3 cut(s)	760, 940, 1731
BmrFI	CCNGG	4 cut(s)	107, 187, 888, 1293
BmrI	ACTGGG	1 cut(s)	1410
BmsI	GCATC	4 cut(s)	664, 1516, 1523, 1745
BmuI	ACTGGG	1 cut(s)	1410
BpiI	GAAGAC	1 cut(s)	788
BplI	GAGNNNNNCTC	2 cut(s)	1124, 1156
BpmI	CTGGAG	4 cut(s)	468, 745, 1028, 1610
Bpu10I	CCTNAGC	1 cut(s)	1725
Bpu14I	TTCGAA	1 cut(s)	1781
BpuEI	CTTGAG	2 cut(s)	362, 1492
BpuMI	CCSGG	1 cut(s)	187
Bsa29I	ATCGAT	1 cut(s)	768
BsaAI	YACGTR	1 cut(s)	1721
BsaBI	GATNNNNATC	2 cut(s)	408, 1530
BsaHI	GRCGYC	1 cut(s)	93
BsaI	GGTCTC	1 cut(s)	1046
BsaJI	CCNNGG	3 cut(s)	38, 1292, 1664
BsaWI	WCCGGW	1 cut(s)	218
BsaXI	ACNNNNNCTCC	2 cut(s)	281, 311
Bsc4I	CCNNNNNNNGG	7 cut(s)	120, 186, 446, 808, 847, 1287, 1694
Bse118I	RCCGGY	2 cut(s)	277, 1465
Bse1I	ACTGG	3 cut(s)	975, 1405, 1593
Bse21I	CCTNAGG	1 cut(s)	32
Bse3DI	GCAATG	1 cut(s)	564
Bse8I	GATNNNNATC	2 cut(s)	408, 1530
BseBI	CCWGG	3 cut(s)	107, 888, 1293
BseCI	ATCGAT	1 cut(s)	768
BseDI	CCNNGG	3 cut(s)	38, 1292, 1664
BseGI	GGATG	3 cut(s)	691, 1102, 1531
BseJI	GATNNNNATC	2 cut(s)	408, 1530
BseLI	CCNNNNNNNGG	7 cut(s)	120, 186, 446, 808, 847, 1287, 1694
BseMI	GCAATG	1 cut(s)	564
BseMII	CTCAG	6 cut(s)	23, 110, 890, 1210, 1430, 1716
BseNI	ACTGG	3 cut(s)	975, 1405, 1593
BseRI	GAGGAG	4 cut(s)	359, 374, 550, 934
BseSI	GKGCMC	1 cut(s)	1720
BseXI	GCAGC	2 cut(s)	1228, 1534
BsgI	GTGCAG	2 cut(s)	166, 1413
Bsh1236I	CGCG	1 cut(s)	40
BshFI	GGCC	5 cut(s)	30, 37, 204, 1291, 1775
BshVI	ATCGAT	1 cut(s)	768
BsiHKAI	GWGCWC	1 cut(s)	1720
BsiHKCI	CYCGRG	2 cut(s)	1174, 1665
BsiSI	CCGG	4 cut(s)	187, 219, 278, 1466
BslFI	GGGAC	4 cut(s)	399, 1318, 1417, 1743
BslI	CCNNNNNNNGG	7 cut(s)	120, 186, 446, 808, 847, 1287, 1694
BsmAI	GTCTC	5 cut(s)	522, 1046, 1121, 1127, 1176
BsmFI	GGGAC	4 cut(s)	399, 1318, 1417, 1743
BsmI	GAATGC	1 cut(s)	1626
BsnI	GGCC	5 cut(s)	30, 37, 204, 1291, 1775
Bso31I	GGTCTC	1 cut(s)	1046
BsoBI	CYCGRG	2 cut(s)	1174, 1665
Bsp119I	TTCGAA	1 cut(s)	1781
Bsp1286I	GDGCHC	1 cut(s)	1720
BspANI	GGCC	5 cut(s)	30, 37, 204, 1291, 1775
BspCNI	CTCAG	6 cut(s)	24, 111, 891, 1209, 1429, 1717
BspDI	ATCGAT	1 cut(s)	768
BspFNI	CGCG	1 cut(s)	40
BspLI	GGNNCC	3 cut(s)	760, 940, 1731
BspMI	ACCTGC	1 cut(s)	1741
BspPI	GGATC	5 cut(s)	50, 476, 633, 670, 1539
BspT104I	TTCGAA	1 cut(s)	1781
BspTNI	GGTCTC	1 cut(s)	1046
BsrDI	GCAATG	1 cut(s)	564
BsrFI	RCCGGY	2 cut(s)	277, 1465
BsrI	ACTGG	3 cut(s)	975, 1405, 1593
BssAI	RCCGGY	2 cut(s)	277, 1465
BssECI	CCNNGG	3 cut(s)	38, 1292, 1664
BssNI	GRCGYC	1 cut(s)	93
Bst2UI	CCWGG	3 cut(s)	107, 888, 1293
Bst4CI	ACNGT	5 cut(s)	51, 328, 390, 879, 1391
Bst6I	CTCTTC	2 cut(s)	66, 697
BstACI	GRCGYC	1 cut(s)	93
BstAPI	GCANNNNNTGC	1 cut(s)	1615
BstBAI	YACGTR	1 cut(s)	1721
BstBI	TTCGAA	1 cut(s)	1781
BstC8I	GCNNGC	4 cut(s)	838, 992, 1142, 1467
BstDEI	CTNAG	7 cut(s)	32, 119, 580, 899, 1196, 1416, 1725
BstDSI	CCRYGG	1 cut(s)	38
BstF5I	GGATG	3 cut(s)	691, 1102, 1531
BstFNI	CGCG	1 cut(s)	40
BstHHI	GCGC	1 cut(s)	1514
BstMAI	GTCTC	5 cut(s)	522, 1046, 1121, 1127, 1176
BstMWI	GCNNNNNNNGC	4 cut(s)	683, 996, 1238, 1615
BstNI	CCWGG	3 cut(s)	107, 888, 1293
BstNSI	RCATGY	1 cut(s)	720
BstSCI	CCNGG	4 cut(s)	105, 185, 886, 1291
BstSLI	GKGCMC	1 cut(s)	1720
BstUI	CGCG	1 cut(s)	40
BstV1I	GCAGC	2 cut(s)	1228, 1534
BstV2I	GAAGAC	1 cut(s)	788
BstX2I	RGATCY	2 cut(s)	638, 662
BstXI	CCANNNNNNTGG	1 cut(s)	649
BstYI	RGATCY	2 cut(s)	638, 662
Bsu15I	ATCGAT	1 cut(s)	768
Bsu36I	CCTNAGG	1 cut(s)	32
BsuI	GTATCC	1 cut(s)	316
BsuRI	GGCC	5 cut(s)	30, 37, 204, 1291, 1775
BsuTUI	ATCGAT	1 cut(s)	768
BtgI	CCRYGG	1 cut(s)	38
BtsCI	GGATG	3 cut(s)	691, 1102, 1531
BtsI	GCAGTG	2 cut(s)	1489, 1499
BtsIMutI	CAGTG	4 cut(s)	307, 1398, 1489, 1499
BveI	ACCTGC	1 cut(s)	1741
Cac8I	GCNNGC	4 cut(s)	838, 992, 1142, 1467
CaiI	CAGNNNCTG	1 cut(s)	1400
CfoI	GCGC	1 cut(s)	1514
Cfr10I	RCCGGY	2 cut(s)	277, 1465
Cfr13I	GGNCC	6 cut(s)	189, 437, 811, 1685, 1730, 1773
Cfr42I	CCGCGG	1 cut(s)	41
ClaI	ATCGAT	1 cut(s)	768
CseI	GACGC	2 cut(s)	95, 515
Csp6I	GTAC	1 cut(s)	16
CviAII	CATG	6 cut(s)	643, 717, 842, 947, 1462, 1615
CviQI	GTAC	1 cut(s)	16
DdeI	CTNAG	7 cut(s)	32, 119, 580, 899, 1196, 1416, 1725
DrdI	GACNNNNNNGTC	1 cut(s)	92
DseDI	GACNNNNNNGTC	1 cut(s)	92
Eam1104I	CTCTTC	2 cut(s)	66, 697
EarI	CTCTTC	2 cut(s)	66, 697
EciI	GGCGGA	2 cut(s)	170, 302
Eco31I	GGTCTC	1 cut(s)	1046
Eco47I	GGWCC	5 cut(s)	189, 437, 811, 1685, 1730
Eco57I	CTGAAG	3 cut(s)	353, 762, 1767
Eco72I	CACGTG	1 cut(s)	1721
Eco81I	CCTNAGG	1 cut(s)	32
Eco88I	CYCGRG	2 cut(s)	1174, 1665
EcoO109I	RGGNCCY	3 cut(s)	811, 1685, 1730
EcoRI	GAATTC	1 cut(s)	76
EcoRII	CCWGG	3 cut(s)	105, 886, 1291
FaeI	CATG	6 cut(s)	646, 720, 845, 950, 1465, 1618
FalI	AAGNNNNNCTT	2 cut(s)	348, 380
FaqI	GGGAC	4 cut(s)	399, 1318, 1417, 1743
FatI	CATG	6 cut(s)	642, 716, 841, 946, 1461, 1614
FbaI	TGATCA	1 cut(s)	403
Fnu4HI	GCNGC	6 cut(s)	38, 125, 285, 1242, 1548, 1776
FokI	GGATG	3 cut(s)	678, 1109, 1538
Fsp4HI	GCNGC	6 cut(s)	38, 125, 285, 1242, 1548, 1776
FspBI	CTAG	2 cut(s)	1017, 1377
GlaI	GCGC	1 cut(s)	1513
GluI	GCNGC	6 cut(s)	38, 125, 285, 1242, 1548, 1776
GsuI	CTGGAG	4 cut(s)	468, 745, 1028, 1610
HaeIII	GGCC	5 cut(s)	30, 37, 204, 1291, 1775
HapII	CCGG	4 cut(s)	187, 219, 278, 1466
HgaI	GACGC	2 cut(s)	95, 515
HhaI	GCGC	1 cut(s)	1514
Hin1I	GRCGYC	1 cut(s)	93
Hin1II	CATG	6 cut(s)	646, 720, 845, 950, 1465, 1618
Hin6I	GCGC	1 cut(s)	1512
HinP1I	GCGC	1 cut(s)	1512
HincII	GTYRAC	1 cut(s)	25
HindII	GTYRAC	1 cut(s)	25
HinfI	GANTC	6 cut(s)	167, 515, 765, 1409, 1433, 1471
HpaII	CCGG	4 cut(s)	187, 219, 278, 1466
HphI	GGTGA	3 cut(s)	464, 566, 791
Hpy166II	GTNNAC	5 cut(s)	25, 958, 968, 1274, 1718
Hpy188III	TCNNGA	9 cut(s)	10, 695, 762, 1203, 1360, 1523, 1535, 1649, 1745
Hpy8I	GTNNAC	5 cut(s)	25, 958, 968, 1274, 1718
HpyAV	CCTTC	6 cut(s)	152, 287, 329, 901, 929, 1281
HpyCH4III	ACNGT	5 cut(s)	51, 328, 390, 879, 1391
HpyCH4IV	ACGT	6 cut(s)	14, 21, 93, 230, 1006, 1720
HpyF10VI	GCNNNNNNNGC	4 cut(s)	683, 996, 1238, 1615
HpyF3I	CTNAG	7 cut(s)	32, 119, 580, 899, 1196, 1416, 1725
HpySE526I	ACGT	6 cut(s)	14, 21, 93, 230, 1006, 1720
Hsp92I	GRCGYC	1 cut(s)	93
Hsp92II	CATG	6 cut(s)	646, 720, 845, 950, 1465, 1618
HspAI	GCGC	1 cut(s)	1512
KroI	GCCGGC	1 cut(s)	1465
KroNI	GCCGGC	1 cut(s)	1467
Ksp22I	TGATCA	1 cut(s)	403
KspI	CCGCGG	1 cut(s)	41
LmnI	GCTCC	3 cut(s)	361, 764, 944
Lsp1109I	GCAGC	2 cut(s)	1228, 1534
LweI	GCATC	4 cut(s)	664, 1516, 1523, 1745
MaeI	CTAG	2 cut(s)	1017, 1377
MaeII	ACGT	6 cut(s)	14, 21, 93, 230, 1006, 1720
MaeIII	GTNAC	8 cut(s)	10, 397, 452, 723, 854, 1247, 1258, 1602
MfeI	CAATTG	2 cut(s)	1209, 1328
MflI	RGATCY	2 cut(s)	638, 662
MhlI	GDGCHC	1 cut(s)	1720
MlyI	GAGTC	2 cut(s)	176, 524
MroNI	GCCGGC	1 cut(s)	1465
MroXI	GAANNNNTTC	1 cut(s)	1081
MseI	TTAA	7 cut(s)	255, 477, 750, 1067, 1104, 1110, 1265
MslI	CAYNNNNRTG	2 cut(s)	647, 715
MspA1I	CMGCKG	2 cut(s)	40, 1224
MspI	CCGG	4 cut(s)	187, 219, 278, 1466
MspR9I	CCNGG	4 cut(s)	107, 187, 888, 1293
MunI	CAATTG	2 cut(s)	1209, 1328
Mva1269I	GAATGC	1 cut(s)	1626
MvaI	CCWGG	3 cut(s)	107, 888, 1293
MvnI	CGCG	1 cut(s)	40
MwoI	GCNNNNNNNGC	4 cut(s)	683, 996, 1238, 1615
NaeI	GCCGGC	1 cut(s)	1467
NciI	CCSGG	1 cut(s)	187
NgoMIV	GCCGGC	1 cut(s)	1465
NlaIII	CATG	6 cut(s)	646, 720, 845, 950, 1465, 1618
NlaIV	GGNNCC	3 cut(s)	760, 940, 1731
NmeAIII	GCCGAG	1 cut(s)	1205
NmuCI	GTSAC	4 cut(s)	10, 452, 723, 854
NspI	RCATGY	1 cut(s)	720
NspV	TTCGAA	1 cut(s)	1781
PaeR7I	CTCGAG	1 cut(s)	1174
PctI	GAATGC	1 cut(s)	1626
PdiI	GCCGGC	1 cut(s)	1467
PdmI	GAANNNNTTC	1 cut(s)	1081
PfeI	GAWTC	4 cut(s)	765, 1409, 1433, 1471
PflMI	CCANNNNNTGG	1 cut(s)	446
PfoI	TCCNGGA	1 cut(s)	105
PkrI	GCNGC	6 cut(s)	39, 126, 286, 1243, 1549, 1777
PleI	GAGTC	2 cut(s)	175, 523
PmaCI	CACGTG	1 cut(s)	1721
PmlI	CACGTG	1 cut(s)	1721
PpsI	GAGTC	2 cut(s)	175, 523
Ppu21I	YACGTR	1 cut(s)	1721
PpuMI	RGGWCCY	3 cut(s)	811, 1685, 1730
PsiI	TTATAA	1 cut(s)	492
Psp5II	RGGWCCY	3 cut(s)	811, 1685, 1730
Psp6I	CCWGG	3 cut(s)	105, 886, 1291
PspCI	CACGTG	1 cut(s)	1721
PspGI	CCWGG	3 cut(s)	105, 886, 1291
PspN4I	GGNNCC	3 cut(s)	760, 940, 1731
PspPI	GGNCC	6 cut(s)	189, 437, 811, 1685, 1730, 1773
PspPPI	RGGWCCY	3 cut(s)	811, 1685, 1730
PspXI	VCTCGAGB	1 cut(s)	1174
PstNI	CAGNNNCTG	1 cut(s)	1400
PsuI	RGATCY	2 cut(s)	638, 662
RsaI	GTAC	1 cut(s)	17
RsaNI	GTAC	1 cut(s)	16
RseI	CAYNNNNRTG	2 cut(s)	647, 715
SacII	CCGCGG	1 cut(s)	41
SaqAI	TTAA	7 cut(s)	255, 477, 750, 1067, 1104, 1110, 1265
SatI	GCNGC	6 cut(s)	38, 125, 285, 1242, 1548, 1776
Sau96I	GGNCC	6 cut(s)	189, 437, 811, 1685, 1730, 1773
SchI	GAGTC	2 cut(s)	176, 524
ScrFI	CCNGG	4 cut(s)	107, 187, 888, 1293
SduI	GDGCHC	1 cut(s)	1720
SfaNI	GCATC	4 cut(s)	664, 1516, 1523, 1745
Sfr274I	CTCGAG	1 cut(s)	1174
Sfr303I	CCGCGG	1 cut(s)	41
SfuI	TTCGAA	1 cut(s)	1781
SgrBI	CCGCGG	1 cut(s)	41
SinI	GGWCC	5 cut(s)	189, 437, 811, 1685, 1730
SlaI	CTCGAG	1 cut(s)	1174
SmiMI	CAYNNNNRTG	2 cut(s)	647, 715
SmlI	CTYRAG	3 cut(s)	341, 1174, 1507
SmoI	CTYRAG	3 cut(s)	341, 1174, 1507
SspMI	CTAG	2 cut(s)	1017, 1377
StyD4I	CCNGG	4 cut(s)	105, 185, 886, 1291
TaaI	ACNGT	5 cut(s)	51, 328, 390, 879, 1391
TaiI	ACGT	6 cut(s)	17, 24, 96, 233, 1009, 1723
TaqI	TCGA	6 cut(s)	471, 768, 1175, 1648, 1781, 1789
TauI	GCSGC	4 cut(s)	40, 127, 287, 1778
TfiI	GAWTC	4 cut(s)	765, 1409, 1433, 1471
Tru1I	TTAA	7 cut(s)	255, 477, 750, 1067, 1104, 1110, 1265
Tru9I	TTAA	7 cut(s)	255, 477, 750, 1067, 1104, 1110, 1265
TscAI	CASTG	4 cut(s)	307, 1405, 1489, 1499
TseFI	GTSAC	4 cut(s)	10, 452, 723, 854
TseI	GCWGC	2 cut(s)	1241, 1547
Tsp45I	GTSAC	4 cut(s)	10, 452, 723, 854
TspDTI	ATGAA	6 cut(s)	17, 1085, 1113, 1314, 1467, 1554
TspRI	CASTG	4 cut(s)	307, 1405, 1489, 1499
Van91I	CCANNNNNTGG	1 cut(s)	446
VneI	GTGCAC	1 cut(s)	1716
VpaK11BI	GGWCC	5 cut(s)	189, 437, 811, 1685, 1730
XapI	RAATTY	4 cut(s)	76, 605, 746, 892
XceI	RCATGY	1 cut(s)	720
XhoI	CTCGAG	1 cut(s)	1174
XmnI	GAANNNNTTC	1 cut(s)	1081
XspI	CTAG	2 cut(s)	1017, 1377
ZraI	GACGTC	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.