Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0006766

Physical Location & Seq

Genomic Coordinates Reverse (-)

11226080 .. 11230668

Gene Structure 4589 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG133000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGCTGATGAAGATAGTGACGTACAACGTCAACGGGCTGAGGCCGCGGATCGCACAGTTCGGCTCTCTTCTGAAATTGCTGAATTCCTTGGACGCTGACGTCATTTGCTTCCAGGAAACCAAACTGAGGCGGCAGGAATTGACCGCCGATTTGGTAATGGCGGAAGGCTACGAGTCGTTCTTCTCCTGCACCCGGACTTCCGAGCGAGGCCGTGCTGGATATTCCGGTGTGGCTACGTTTTGTCGGGTCAAGTCGGCGTTTAATAGTGATGAGGTGGCGTTGCCGGTGGCGGCGGAGGAAGGGTTCAGTGGTTTGCTCGGAGAATTGGATACGGTGGCAGAAGGGCTTGAGGAGTTTTCGAAAGAGGAGCTTCTTCAGGTTGATGGAGAGGGACGGTGTGTTGTTACTGATCATCATCATTTTGTTCTATTCAATTTGTATGGACCAAGAGCTGGAGGTGACGATACGGAAAGGATCGAGTTTAAGCTCAATTTTTATAAGATGTTACAGAAAAGATGGGAGTCTCTCTTGCGTCAGGGGAGGAGGATAATTGTAGTTGGTGATCTGAACATTGCACCCACTTGCTTAGATCGTTGTGAAGCAGAACCAGAATTTGAGAACAATCAATTCAGAAGATGGTTTAGATCCATGTTAGTGGAGAATAGAGGATCTTTCTTTGATGTTTTCAGAGCAAAACATCCTGATAGAAGAGAAGCATACACATGCTGGTCACAAAGTAGTGGTGCTGAAGAATTTAATTATGGCTCCAGAATCGATCACATTCTTTGTGCTGGTTTATGTCTTCACCAAGAGCAGGACCTTCAAAACCATAACTTTGTAGCTTGCCATGTCAAGGAGTGTGACATATTGACACAATATAAACGGTGGAAACCAGGAAATTCACTGAGGTGGAAGGGAGGGCAGAGAAGTATCAAACTTGAAGGCTCCGATCATGCACCTGTTTACACTAGTTTACTGGAATTGCCTAATATCTGCCAGCATAGCACCCCACGTTTATCTGCTAGATATATTCCAATGGTTCGAGGTCTCCAGCAAACCCTTGTATCATTGTTAATGAAAAGAAAAGTTTCTGAACAAGTGGATGAAATTAACATTAAAGAGAGTTGTAGCGAGACAGAGACAAGCTCGCCTGACCAATTTGGCACACCCTGTTCTTCCTCGAGCCAAGACTTTGGATTCCTCAGTTCAAGTACAATTGAGTGTTCCAGCAGTTTTGCTAATGAGGCTGCTTGTAACACCTTAGTTACTTTAAGTAGTGAGCCTACCAAAACAAGGCCAGGGAATGAAACTAAGAAAAAAGCAAAAGGCAGTCAATTGTCCCAACTCTCATTGAGATCATTTTTCCAGAAAAGTTCAATCCCTAGCAAGAGCACCCGTGCAGACACTGGGACTGAATCAACTCAGATAGATGTTTCAGAATCTAATCATTTGCCAAATGAAACTCCCATGCCAGCGAATCAAAGTGGCAGTGTAGAGCAGTGTGTATTGCACTCAAGCGCATCAATTCAGGATGCAGATCAAGATGAACTCGCTGCTTGTTCTTTGAAGAAAGAGAAGAATAGTTTAGCTTTACTGGAGTGGCAAAGGTTACAGCAAGTCATGCAGAATAGCATACCACTTTGCAAGGGTCATCGAGAACCTTGTGTTCCTCGGGTTGTGAAGAAACAAGGTCCTAATTTTGGTCGCAGATTTTATGTTTGTGCACGTGCTGAGGCCGAACTGCTGAATCGGCTGTACCAGGTCTCTCTCCAACACCTTGGACACCAACAGTGGCAAGCACTCTATGGACCTGCATCAAATCCTGAAGCAAATTGTAATTATTTCAAATGGGCCGCTTCAAAACCTCGAAACAACAAGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001650 GO:0003674 GO:0003824 GO:0003906 GO:0004518 GO:0004527 GO:0004529 GO:0004536 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008296 GO:0008309 GO:0008311 GO:0008408 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0016796 GO:0016895 GO:0019866 GO:0031090 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

Exo_endo_phos zf-GRF

Protein Analysis

627

Amino Acids

70.57

Weight (kDa)

7.18

Isoelectric Point (pI)

52.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	6 - 265	2.2e-20	Endonuclease/Exonuclease/phosphatase family
Zn_ribbon_GRF	PF06839	546 - 578	1e-07	GRF zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36050 AT4G36050 AT4G36050 AT4G36050 AT4G36050
fragaria_vesca	FvH4_1g11761 FvH4_1g11761 FvH4_1g11761 FvH4_1g11761 FvH4_1g11761
malus_domestica	MD02G1131900.v1.1
prunus_persica	Prupe.7G168600_v2.0.a1 Prupe.7G168600_v2.0.a1 Prupe.7G168600_v2.0.a1
pyrus_communis	pycom02g10280
rosa_chinensis	RchiOBHm_Chr2g0099381
rosa_laevigata	RLG00000016877
rosa_multiflora	Rmu_sc0002487.1_g000007
rosa_roxburghii	Rroxscaffold_2G00143120
rosa_rugosa	Rorug02G0079000 Rorug02G0079100
rosa_samantha	Rh2AG129000 Rh2BG132000 Rh2CG132800 Rh2DG133000
rosa_wichuraiana	Rw2G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	498
AasI	GACNNNNNNGTC	1 cut(s)	98
AatII	GACGTC	1 cut(s)	102
Acc36I	ACCTGC	1 cut(s)	1819
AccB7I	CCANNNNNTGG	1 cut(s)	452
AccII	CGCG	1 cut(s)	46
AciI	CCGC	8 cut(s)	44, 46, 130, 144, 161, 290, 293, 1854
AclWI	GGATC	4 cut(s)	56, 482, 639, 676
AcsI	RAATTY	4 cut(s)	82, 611, 752, 898
AcuI	CTGAAG	3 cut(s)	359, 768, 1845
AcvI	CACGTG	1 cut(s)	1727
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	3 cut(s)	23, 1213, 1757
AfiI	CCNNNNNNNGG	7 cut(s)	126, 192, 452, 814, 853, 1293, 1700
AgsI	TTSAA	8 cut(s)	433, 824, 941, 1209, 1377, 1567, 1846, 1860
AhlI	ACTAGT	1 cut(s)	968
AjnI	CCWGG	4 cut(s)	111, 892, 1297, 1758
AleI	CACNNNNGTG	1 cut(s)	907
AloI	GAACNNNNNNTCC	2 cut(s)	287, 319
AluBI	AGCT	6 cut(s)	370, 452, 487, 842, 1146, 1589
AluI	AGCT	6 cut(s)	370, 452, 487, 842, 1146, 1589
Alw21I	GWGCWC	2 cut(s)	1394, 1726
Alw26I	GTCTC	5 cut(s)	528, 1052, 1127, 1133, 1768
Alw44I	GTGCAC	1 cut(s)	1722
AlwI	GGATC	4 cut(s)	56, 482, 639, 676
AlwNI	CAGNNNCTG	1 cut(s)	1406
Ama87I	CYCGRG	2 cut(s)	1180, 1671
AoxI	GGCC	5 cut(s)	41, 208, 1295, 1734, 1851
ApaLI	GTGCAC	1 cut(s)	1722
ApeKI	GCWGC	2 cut(s)	1247, 1553
ApoI	RAATTY	4 cut(s)	82, 611, 752, 898
ArsI	GACNNNNNNTTYG	2 cut(s)	133, 165
Asp700I	GAANNNNTTC	1 cut(s)	1087
AspLEI	GCGC	1 cut(s)	1520
AspS9I	GGNCC	5 cut(s)	443, 817, 1691, 1808, 1851
AsuC2I	CCSGG	1 cut(s)	193
AsuHPI	GGTGA	3 cut(s)	470, 572, 797
AsuII	TTCGAA	1 cut(s)	359
AvaI	CYCGRG	2 cut(s)	1180, 1671
AvaII	GGWCC	4 cut(s)	443, 817, 1691, 1808
BaeGI	GKGCMC	1 cut(s)	1726
BaeI	ACNNNNGTAYC	2 cut(s)	1047, 1080
BbrPI	CACGTG	1 cut(s)	1727
BbsI	GAAGAC	1 cut(s)	794
Bbv12I	GWGCWC	2 cut(s)	1394, 1726
BbvCI	CCTCAGC	2 cut(s)	38, 1731
BbvI	GCAGC	2 cut(s)	1234, 1540
BccI	CCATC	3 cut(s)	377, 510, 630
BceAI	ACGGC	1 cut(s)	195
BciT130I	CCWGG	4 cut(s)	113, 894, 1299, 1760
BciVI	GTATCC	1 cut(s)	322
BclI	TGATCA	1 cut(s)	409
BcnI	CCSGG	1 cut(s)	193
BcoDI	GTCTC	5 cut(s)	528, 1052, 1127, 1133, 1768
BcuI	ACTAGT	1 cut(s)	968
BfaI	CTAG	3 cut(s)	969, 1023, 1383
BfuAI	ACCTGC	1 cut(s)	1819
BfuI	GTATCC	1 cut(s)	322
BisI	GCNGC	6 cut(s)	44, 131, 291, 1248, 1554, 1854
BlsI	GCNGC	6 cut(s)	45, 132, 292, 1249, 1555, 1855
Bme1390I	CCNGG	5 cut(s)	113, 193, 894, 1299, 1760
Bme18I	GGWCC	4 cut(s)	443, 817, 1691, 1808
BmeT110I	CYCGRG	2 cut(s)	1180, 1671
BmgT120I	GGNCC	5 cut(s)	443, 817, 1691, 1808, 1851
BmiI	GGNNCC	2 cut(s)	766, 946
BmrFI	CCNGG	5 cut(s)	113, 193, 894, 1299, 1760
BmrI	ACTGGG	1 cut(s)	1416
BmsI	GCATC	3 cut(s)	1522, 1529, 1823
BmuI	ACTGGG	1 cut(s)	1416
BpiI	GAAGAC	1 cut(s)	794
BplI	GAGNNNNNCTC	2 cut(s)	1130, 1162
BpmI	CTGGAG	4 cut(s)	474, 751, 1034, 1616
Bpu10I	CCTNAGC	2 cut(s)	38, 1731
Bpu14I	TTCGAA	1 cut(s)	359
BpuEI	CTTGAG	2 cut(s)	368, 1498
BpuMI	CCSGG	1 cut(s)	193
Bsa29I	ATCGAT	1 cut(s)	774
BsaAI	YACGTR	1 cut(s)	1727
BsaBI	GATNNNNATC	2 cut(s)	414, 1536
BsaHI	GRCGYC	1 cut(s)	99
BsaI	GGTCTC	2 cut(s)	1052, 1768
BsaJI	CCNNGG	5 cut(s)	44, 87, 1298, 1670, 1777
BsaWI	WCCGGW	1 cut(s)	224
BsaXI	ACNNNNNCTCC	2 cut(s)	287, 317
Bsc4I	CCNNNNNNNGG	7 cut(s)	126, 192, 452, 814, 853, 1293, 1700
Bse118I	RCCGGY	1 cut(s)	283
Bse1I	ACTGG	3 cut(s)	981, 1411, 1599
Bse3DI	GCAATG	1 cut(s)	570
Bse8I	GATNNNNATC	2 cut(s)	414, 1536
BseBI	CCWGG	4 cut(s)	113, 894, 1299, 1760
BseCI	ATCGAT	1 cut(s)	774
BseDI	CCNNGG	5 cut(s)	44, 87, 1298, 1670, 1777
BseGI	GGATG	3 cut(s)	697, 1108, 1537
BseJI	GATNNNNATC	2 cut(s)	414, 1536
BseLI	CCNNNNNNNGG	7 cut(s)	126, 192, 452, 814, 853, 1293, 1700
BseMI	GCAATG	1 cut(s)	570
BseMII	CTCAG	6 cut(s)	29, 116, 896, 1216, 1436, 1722
BseNI	ACTGG	3 cut(s)	981, 1411, 1599
BseRI	GAGGAG	3 cut(s)	365, 380, 556
BseSI	GKGCMC	1 cut(s)	1726
BseXI	GCAGC	2 cut(s)	1234, 1540
BsgI	GTGCAG	2 cut(s)	172, 1419
Bsh1236I	CGCG	1 cut(s)	46
BshFI	GGCC	5 cut(s)	43, 210, 1297, 1736, 1853
BshVI	ATCGAT	1 cut(s)	774
BsiHKAI	GWGCWC	2 cut(s)	1394, 1726
BsiHKCI	CYCGRG	2 cut(s)	1180, 1671
BsiSI	CCGG	3 cut(s)	193, 225, 284
BslFI	GGGAC	3 cut(s)	405, 1324, 1423
BslI	CCNNNNNNNGG	7 cut(s)	126, 192, 452, 814, 853, 1293, 1700
BsmAI	GTCTC	5 cut(s)	528, 1052, 1127, 1133, 1768
BsmFI	GGGAC	3 cut(s)	405, 1324, 1423
BsnI	GGCC	5 cut(s)	43, 210, 1297, 1736, 1853
Bso31I	GGTCTC	2 cut(s)	1052, 1768
BsoBI	CYCGRG	2 cut(s)	1180, 1671
Bsp119I	TTCGAA	1 cut(s)	359
Bsp1286I	GDGCHC	2 cut(s)	1394, 1726
BspACI	CCGC	8 cut(s)	44, 46, 130, 144, 161, 290, 293, 1854
BspANI	GGCC	5 cut(s)	43, 210, 1297, 1736, 1853
BspCNI	CTCAG	6 cut(s)	30, 117, 897, 1215, 1435, 1723
BspDI	ATCGAT	1 cut(s)	774
BspFNI	CGCG	1 cut(s)	46
BspLI	GGNNCC	2 cut(s)	766, 946
BspMI	ACCTGC	1 cut(s)	1819
BspPI	GGATC	4 cut(s)	56, 482, 639, 676
BspT104I	TTCGAA	1 cut(s)	359
BspTNI	GGTCTC	2 cut(s)	1052, 1768
BsrDI	GCAATG	1 cut(s)	570
BsrFI	RCCGGY	1 cut(s)	283
BsrI	ACTGG	3 cut(s)	981, 1411, 1599
BssAI	RCCGGY	1 cut(s)	283
BssECI	CCNNGG	5 cut(s)	44, 87, 1298, 1670, 1777
BssNI	GRCGYC	1 cut(s)	99
BssT1I	CCWWGG	2 cut(s)	87, 1777
Bst2UI	CCWGG	4 cut(s)	113, 894, 1299, 1760
Bst4CI	ACNGT	5 cut(s)	57, 334, 396, 885, 1791
Bst6I	CTCTTC	2 cut(s)	72, 703
BstACI	GRCGYC	1 cut(s)	99
BstAPI	GCANNNNNTGC	1 cut(s)	1621
BstBAI	YACGTR	1 cut(s)	1727
BstBI	TTCGAA	1 cut(s)	359
BstC8I	GCNNGC	5 cut(s)	844, 998, 1148, 1473, 1797
BstDEI	CTNAG	9 cut(s)	38, 125, 586, 905, 1202, 1261, 1311, 1422, 1731
BstDSI	CCRYGG	1 cut(s)	44
BstF5I	GGATG	3 cut(s)	697, 1108, 1537
BstFNI	CGCG	1 cut(s)	46
BstHHI	GCGC	1 cut(s)	1520
BstMAI	GTCTC	5 cut(s)	528, 1052, 1127, 1133, 1768
BstMWI	GCNNNNNNNGC	5 cut(s)	43, 1002, 1244, 1621, 1750
BstNI	CCWGG	4 cut(s)	113, 894, 1299, 1760
BstNSI	RCATGY	1 cut(s)	726
BstSCI	CCNGG	5 cut(s)	111, 191, 892, 1297, 1758
BstSLI	GKGCMC	1 cut(s)	1726
BstUI	CGCG	1 cut(s)	46
BstV1I	GCAGC	2 cut(s)	1234, 1540
BstV2I	GAAGAC	1 cut(s)	794
BstX2I	RGATCY	2 cut(s)	644, 668
BstXI	CCANNNNNNTGG	3 cut(s)	655, 1193, 1778
BstYI	RGATCY	2 cut(s)	644, 668
Bsu15I	ATCGAT	1 cut(s)	774
BsuI	GTATCC	1 cut(s)	322
BsuRI	GGCC	5 cut(s)	43, 210, 1297, 1736, 1853
BsuTUI	ATCGAT	1 cut(s)	774
BtgI	CCRYGG	1 cut(s)	44
BtsCI	GGATG	3 cut(s)	697, 1108, 1537
BtsI	GCAGTG	2 cut(s)	1495, 1505
BtsIMutI	CAGTG	6 cut(s)	313, 902, 1404, 1495, 1505, 1796
BveI	ACCTGC	1 cut(s)	1819
Cac8I	GCNNGC	5 cut(s)	844, 998, 1148, 1473, 1797
CaiI	CAGNNNCTG	1 cut(s)	1406
CfoI	GCGC	1 cut(s)	1520
Cfr10I	RCCGGY	1 cut(s)	283
Cfr13I	GGNCC	5 cut(s)	443, 817, 1691, 1808, 1851
Cfr42I	CCGCGG	1 cut(s)	47
ClaI	ATCGAT	1 cut(s)	774
CseI	GACGC	2 cut(s)	101, 521
CsiI	ACCWGGT	1 cut(s)	1758
Csp6I	GTAC	3 cut(s)	22, 1212, 1756
CviAII	CATG	6 cut(s)	649, 723, 848, 953, 1468, 1621
CviQI	GTAC	3 cut(s)	22, 1212, 1756
DdeI	CTNAG	9 cut(s)	38, 125, 586, 905, 1202, 1261, 1311, 1422, 1731
DrdI	GACNNNNNNGTC	1 cut(s)	98
DseDI	GACNNNNNNGTC	1 cut(s)	98
Eam1104I	CTCTTC	2 cut(s)	72, 703
EarI	CTCTTC	2 cut(s)	72, 703
EciI	GGCGGA	2 cut(s)	176, 308
Eco130I	CCWWGG	2 cut(s)	87, 1777
Eco31I	GGTCTC	2 cut(s)	1052, 1768
Eco47I	GGWCC	4 cut(s)	443, 817, 1691, 1808
Eco57I	CTGAAG	3 cut(s)	359, 768, 1845
Eco72I	CACGTG	1 cut(s)	1727
Eco88I	CYCGRG	2 cut(s)	1180, 1671
EcoO109I	RGGNCCY	2 cut(s)	817, 1691
EcoRI	GAATTC	1 cut(s)	82
EcoRII	CCWGG	4 cut(s)	111, 892, 1297, 1758
EcoT14I	CCWWGG	2 cut(s)	87, 1777
ErhI	CCWWGG	2 cut(s)	87, 1777
FaeI	CATG	6 cut(s)	652, 726, 851, 956, 1471, 1624
FalI	AAGNNNNNCTT	2 cut(s)	354, 386
FaqI	GGGAC	3 cut(s)	405, 1324, 1423
FatI	CATG	6 cut(s)	648, 722, 847, 952, 1467, 1620
FbaI	TGATCA	1 cut(s)	409
Fnu4HI	GCNGC	6 cut(s)	44, 131, 291, 1248, 1554, 1854
FokI	GGATG	3 cut(s)	684, 1115, 1544
Fsp4HI	GCNGC	6 cut(s)	44, 131, 291, 1248, 1554, 1854
FspBI	CTAG	3 cut(s)	969, 1023, 1383
GlaI	GCGC	1 cut(s)	1519
GluI	GCNGC	6 cut(s)	44, 131, 291, 1248, 1554, 1854
GsuI	CTGGAG	4 cut(s)	474, 751, 1034, 1616
HaeIII	GGCC	5 cut(s)	43, 210, 1297, 1736, 1853
HapII	CCGG	3 cut(s)	193, 225, 284
HgaI	GACGC	2 cut(s)	101, 521
HhaI	GCGC	1 cut(s)	1520
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	6 cut(s)	652, 726, 851, 956, 1471, 1624
Hin6I	GCGC	1 cut(s)	1518
HinP1I	GCGC	1 cut(s)	1518
HincII	GTYRAC	1 cut(s)	31
HindII	GTYRAC	1 cut(s)	31
HinfI	GANTC	8 cut(s)	173, 521, 771, 1197, 1415, 1439, 1477, 1747
HpaII	CCGG	3 cut(s)	193, 225, 284
HphI	GGTGA	3 cut(s)	470, 572, 797
Hpy166II	GTNNAC	4 cut(s)	31, 964, 974, 1724
Hpy188III	TCNNGA	7 cut(s)	701, 768, 1366, 1529, 1541, 1655, 1823
Hpy8I	GTNNAC	4 cut(s)	31, 964, 974, 1724
HpyAV	CCTTC	6 cut(s)	158, 293, 335, 830, 907, 935
HpyCH4III	ACNGT	5 cut(s)	57, 334, 396, 885, 1791
HpyCH4IV	ACGT	6 cut(s)	20, 27, 99, 236, 1012, 1726
HpyF10VI	GCNNNNNNNGC	5 cut(s)	43, 1002, 1244, 1621, 1750
HpyF3I	CTNAG	9 cut(s)	38, 125, 586, 905, 1202, 1261, 1311, 1422, 1731
HpySE526I	ACGT	6 cut(s)	20, 27, 99, 236, 1012, 1726
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	6 cut(s)	652, 726, 851, 956, 1471, 1624
HspAI	GCGC	1 cut(s)	1518
Ksp22I	TGATCA	1 cut(s)	409
KspI	CCGCGG	1 cut(s)	47
LmnI	GCTCC	3 cut(s)	367, 770, 950
Lsp1109I	GCAGC	2 cut(s)	1234, 1540
LweI	GCATC	3 cut(s)	1522, 1529, 1823
MabI	ACCWGGT	1 cut(s)	1758
MaeI	CTAG	3 cut(s)	969, 1023, 1383
MaeII	ACGT	6 cut(s)	20, 27, 99, 236, 1012, 1726
MaeIII	GTNAC	9 cut(s)	16, 403, 458, 504, 729, 860, 1253, 1264, 1608
MfeI	CAATTG	2 cut(s)	1215, 1334
MflI	RGATCY	2 cut(s)	644, 668
MhlI	GDGCHC	2 cut(s)	1394, 1726
MlyI	GAGTC	2 cut(s)	182, 530
MmeI	TCCRAC	1 cut(s)	1795
MroXI	GAANNNNTTC	1 cut(s)	1087
MseI	TTAA	7 cut(s)	261, 483, 756, 1073, 1110, 1116, 1271
MslI	CAYNNNNRTG	3 cut(s)	653, 721, 907
MspA1I	CMGCKG	1 cut(s)	46
MspI	CCGG	3 cut(s)	193, 225, 284
MspR9I	CCNGG	5 cut(s)	113, 193, 894, 1299, 1760
MunI	CAATTG	2 cut(s)	1215, 1334
MvaI	CCWGG	4 cut(s)	113, 894, 1299, 1760
MvnI	CGCG	1 cut(s)	46
MwoI	GCNNNNNNNGC	5 cut(s)	43, 1002, 1244, 1621, 1750
NciI	CCSGG	1 cut(s)	193
NlaIII	CATG	6 cut(s)	652, 726, 851, 956, 1471, 1624
NlaIV	GGNNCC	2 cut(s)	766, 946
NmuCI	GTSAC	4 cut(s)	16, 458, 729, 860
NspI	RCATGY	1 cut(s)	726
NspV	TTCGAA	1 cut(s)	359
OliI	CACNNNNGTG	1 cut(s)	907
PaeR7I	CTCGAG	1 cut(s)	1180
PdmI	GAANNNNTTC	1 cut(s)	1087
PfeI	GAWTC	6 cut(s)	771, 1197, 1415, 1439, 1477, 1747
PflMI	CCANNNNNTGG	1 cut(s)	452
PfoI	TCCNGGA	1 cut(s)	111
PkrI	GCNGC	6 cut(s)	45, 132, 292, 1249, 1555, 1855
PleI	GAGTC	2 cut(s)	181, 529
PmaCI	CACGTG	1 cut(s)	1727
PmlI	CACGTG	1 cut(s)	1727
PpsI	GAGTC	2 cut(s)	181, 529
Ppu21I	YACGTR	1 cut(s)	1727
PpuMI	RGGWCCY	2 cut(s)	817, 1691
PsiI	TTATAA	1 cut(s)	498
Psp5II	RGGWCCY	2 cut(s)	817, 1691
Psp6I	CCWGG	4 cut(s)	111, 892, 1297, 1758
PspCI	CACGTG	1 cut(s)	1727
PspGI	CCWGG	4 cut(s)	111, 892, 1297, 1758
PspN4I	GGNNCC	2 cut(s)	766, 946
PspPI	GGNCC	5 cut(s)	443, 817, 1691, 1808, 1851
PspPPI	RGGWCCY	2 cut(s)	817, 1691
PspXI	VCTCGAGB	1 cut(s)	1180
PstNI	CAGNNNCTG	1 cut(s)	1406
PsuI	RGATCY	2 cut(s)	644, 668
RsaI	GTAC	3 cut(s)	23, 1213, 1757
RsaNI	GTAC	3 cut(s)	22, 1212, 1756
RseI	CAYNNNNRTG	3 cut(s)	653, 721, 907
SacII	CCGCGG	1 cut(s)	47
SaqAI	TTAA	7 cut(s)	261, 483, 756, 1073, 1110, 1116, 1271
SatI	GCNGC	6 cut(s)	44, 131, 291, 1248, 1554, 1854
Sau96I	GGNCC	5 cut(s)	443, 817, 1691, 1808, 1851
SchI	GAGTC	2 cut(s)	182, 530
ScrFI	CCNGG	5 cut(s)	113, 193, 894, 1299, 1760
SduI	GDGCHC	2 cut(s)	1394, 1726
SexAI	ACCWGGT	1 cut(s)	1758
SfaNI	GCATC	3 cut(s)	1522, 1529, 1823
Sfr274I	CTCGAG	1 cut(s)	1180
Sfr303I	CCGCGG	1 cut(s)	47
SfuI	TTCGAA	1 cut(s)	359
SgrBI	CCGCGG	1 cut(s)	47
SinI	GGWCC	4 cut(s)	443, 817, 1691, 1808
SlaI	CTCGAG	1 cut(s)	1180
SmiMI	CAYNNNNRTG	3 cut(s)	653, 721, 907
SmlI	CTYRAG	3 cut(s)	347, 1180, 1513
SmoI	CTYRAG	3 cut(s)	347, 1180, 1513
SpeI	ACTAGT	1 cut(s)	968
SsiI	CCGC	8 cut(s)	44, 46, 130, 144, 161, 290, 293, 1854
SspMI	CTAG	3 cut(s)	969, 1023, 1383
StyD4I	CCNGG	5 cut(s)	111, 191, 892, 1297, 1758
StyI	CCWWGG	2 cut(s)	87, 1777
TaaI	ACNGT	5 cut(s)	57, 334, 396, 885, 1791
TaiI	ACGT	6 cut(s)	23, 30, 102, 239, 1015, 1729
TaqI	TCGA	7 cut(s)	359, 477, 774, 1042, 1181, 1654, 1867
TatI	WGTACW	1 cut(s)	1211
TauI	GCSGC	4 cut(s)	46, 133, 293, 1856
TfiI	GAWTC	6 cut(s)	771, 1197, 1415, 1439, 1477, 1747
Tru1I	TTAA	7 cut(s)	261, 483, 756, 1073, 1110, 1116, 1271
Tru9I	TTAA	7 cut(s)	261, 483, 756, 1073, 1110, 1116, 1271
TscAI	CASTG	6 cut(s)	313, 909, 1411, 1495, 1505, 1796
TseFI	GTSAC	4 cut(s)	16, 458, 729, 860
TseI	GCWGC	2 cut(s)	1247, 1553
Tsp45I	GTSAC	4 cut(s)	16, 458, 729, 860
TspDTI	ATGAA	6 cut(s)	23, 1091, 1119, 1320, 1473, 1560
TspGWI	ACGGA	1 cut(s)	482
TspRI	CASTG	6 cut(s)	313, 909, 1411, 1495, 1505, 1796
Van91I	CCANNNNNTGG	1 cut(s)	452
VneI	GTGCAC	1 cut(s)	1722
VpaK11BI	GGWCC	4 cut(s)	443, 817, 1691, 1808
XapI	RAATTY	4 cut(s)	82, 611, 752, 898
XceI	RCATGY	1 cut(s)	726
XhoI	CTCGAG	1 cut(s)	1180
XmnI	GAANNNNTTC	1 cut(s)	1087
XspI	CTAG	3 cut(s)	969, 1023, 1383
ZraI	GACGTC	1 cut(s)	100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.