MD02G1141700.v1.1

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
11787118 .. 11789484
2367 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1141700.v1.1.491

Sequence Viewer

Length: 1488 bp
ATGAACTTGTTCTCCACCAGAGAAATGCCTTCTCCGTCGTCGTTGTTCTCTGCCTACGCCTCCATGGCAGCGTCAATCATGCTCTTCCGGTCCATGGCGAACGAGCTCATTCCTCAACCAGTTAGGGGCTACGTTTTATCTGCCATCAAATACGTCTTCAAGACTCATTCTCCTAAACTCACCCTAGTCATAGAGGAATCGAGCGGAATGTCGCGCAATCAAGTCTACGAAGCTGCGGAGGTTTATTTGTGCACGAAAATCAGCTCCAACACTGAGAGGATCAGAGTTAGCAAGAGCCCCAAGGGGAAGAACTTGACAATCAGACTCGAGAAAGGCGAGAAGTTGGTCGATTTCTATGAAGGGATTGAGCTCAAATGGAAGTTTCTTTGTACGGATTCCAAACAGAACAACCCTAATGATCCATCTCCGAGGTCCGAAAAGCGCTACTTTGAGCTAACATTCCACATGATGCACAAAGAAAAAGTATTGGGATGTTATTTGCCTTATGTTCTTGAAAGGGCCGACGCAATGAAAGATGAAGAAAGGGTATTGAAGATGTATACATTGAATGCCAACTATCCTTACAATGGCATCAAATGGGAGTCCATCAATCTCGAACACCCTGCAACGTTCGAGACTCTGGCCATGGACCAAGAGCTCAAAAATGCGGTTATCGATGATCTTAACAGGTTTGTGAAGAGGAAGGAGTTCTACAAGAAAGTAGGAAGGGCGTGGAAACGAGGGTATTTGTTGTATGGTCCTCCGGGCACTGGAAAATCGAGCTTGGTAGCAGCAATGGCTAATTATCTCAAGTTTGATGTCTATGACCTGCAGCTGGCTAACGTTCTTCGTGACTCGGACCTGAGAAAACTGCTGCTGGGCACCGCGAACAGGTCGATTCTTGTGATCGAGGACATTGATTGTACCGTTGATCTGCCTGATCGTCGACATACAGATGGAAAAAAGCAACACGATGTACAGTTGACACTCTCTGGACTACTAAACTTCATAGATGGCTTATGGTCTAGCTGTGGGGATGAGAGGATCATAATCTTTACCACTAACCACAAGGACAGGCTAGACCCCGCCCTTCTGCGGCCGGGGCGCATGGACATGCACATTCACATGTCCTACTGCACATACCACGGATTCAAACTCTTGGCCTCGAACTACTTGGACATCCATAACCACCATCACCTCTACGGAGAAATCCAAGACTTACTCAAGGAAACGGAGGTGACTCCAGCGCACGTTGCGGAAGAGCTGATGAAGAGTGAAGATGTTGATACTGCACTCGAAGGGCTTGTTAAGCTTTTAAAGAGGAAGAAATTGGAAGGCGATGAATGTGAGGCGGAGGCTGAGAAGAAGACTGCAGCAAAAAGGCAGAAAACTGGGAACCAACAGAAGAAATCTGTGAGGAATAACAGAAGAATCGCCACAAAAAGAAGCAGCAAACGTTTGTCCGCTAGAAATCCCAATTTGTATTAA

Protein Analysis

496

Amino Acids

56.92

Weight (kDa)

9.13

Isoelectric Point (pI)

51.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 37 - 130 1.1e-24 Domain associated at C-terminal with AAA
AAA PF00004 249 - 377 4.2e-21 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 379 - 445 1.2e-23 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014905)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17760 AT5G17760
fragaria_vesca FvH4_1g12741
malus_domestica MD02G1141700.v1.1 MD15G1254600.v1.1
prunus_persica Prupe.7G159000_v2.0.a1
pyrus_communis pycom02g11170 pycom15g22370
rosa_chinensis RchiOBHm_Chr2g0100821
rosa_laevigata RLG00000017014
rosa_multiflora Rmu_sc0001659.1_g000021
rosa_roxburghii Rroxscaffold_2G00141830
rosa_rugosa Rorug02G0093100
rosa_samantha Rh2CG146700 Rh2DG146100
rosa_wichuraiana Rw2G011010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 837
AccB1I GGYRCC 1 cut(s) 881
AccBSI CCGCTC 1 cut(s) 204
AccI GTMKAC 3 cut(s) 225, 560, 946
AccII CGCG 2 cut(s) 214, 887
AciI CCGC 9 cut(s) 204, 236, 668, 885, 1086, 1096, 1256, 1352, 1464
AclI AACGTT 3 cut(s) 629, 843, 1456
AclWI GGATC 3 cut(s) 287, 413, 1052
AcoI YGGCCR 2 cut(s) 642, 1097
AfaI GTAC 3 cut(s) 391, 925, 978
AfeI AGCGCT 1 cut(s) 443
AfiI CCNNNNNNNGG 7 cut(s) 94, 125, 587, 770, 835, 891, 1095
AflIII ACRYGT 1 cut(s) 1125
AgsI TTSAA 5 cut(s) 160, 515, 553, 568, 1153
AloI GAACNNNNNNTCC 1 cut(s) 28
Alw21I GWGCWC 4 cut(s) 108, 254, 372, 660
Alw26I GTCTC 1 cut(s) 629
Alw44I GTGCAC 1 cut(s) 250
AlwI GGATC 3 cut(s) 287, 413, 1052
Ama87I CYCGRG 1 cut(s) 326
Aor51HI AGCGCT 1 cut(s) 443
AoxI GGCC 4 cut(s) 519, 642, 1097, 1161
ApaLI GTGCAC 1 cut(s) 250
ApeKI GCWGC 7 cut(s) 68, 233, 791, 832, 874, 1373, 1449
Asp700I GAANNNNTTC 2 cut(s) 8, 707
AspLEI GCGC 4 cut(s) 216, 444, 1107, 1249
AspS9I GGNCC 6 cut(s) 90, 432, 519, 649, 758, 859
AsuC2I CCSGG 2 cut(s) 765, 1101
AsuHPI GGTGA 3 cut(s) 172, 1187, 1249
AvaI CYCGRG 1 cut(s) 326
AvaII GGWCC 5 cut(s) 90, 432, 649, 758, 859
BaeGI GKGCMC 3 cut(s) 254, 770, 884
BalI TGGCCA 1 cut(s) 644
BanI GGYRCC 1 cut(s) 881
BanII GRGCYC 4 cut(s) 108, 299, 372, 660
BarI GAAGNNNNNNTAC 2 cut(s) 695, 727
BbsI GAAGAC 2 cut(s) 148, 1373
Bbv12I GWGCWC 4 cut(s) 108, 254, 372, 660
BbvI GCAGC 7 cut(s) 80, 220, 803, 844, 861, 1385, 1461
BccI CCATC 6 cut(s) 152, 430, 614, 950, 1007, 1200
BcgI CGANNNNNNTGC 2 cut(s) 605, 639
BcnI CCSGG 2 cut(s) 765, 1101
BcoDI GTCTC 1 cut(s) 629
BfaI CTAG 4 cut(s) 185, 1026, 1079, 1467
BfmI CTRYAG 2 cut(s) 830, 1371
BfoI RGCGCY 1 cut(s) 445
BfuAI ACCTGC 1 cut(s) 837
BglI GCCNNNNNGGC 1 cut(s) 65
BisI GCNGC 8 cut(s) 69, 234, 792, 833, 875, 1097, 1374, 1450
BlsI GCNGC 8 cut(s) 70, 235, 793, 834, 876, 1098, 1375, 1451
Bme1390I CCNGG 2 cut(s) 765, 1101
Bme18I GGWCC 5 cut(s) 90, 432, 649, 758, 859
BmeT110I CYCGRG 1 cut(s) 326
BmgT120I GGNCC 6 cut(s) 90, 432, 519, 649, 758, 859
BmiI GGNNCC 2 cut(s) 883, 1397
BmrFI CCNGG 2 cut(s) 765, 1101
BmrI ACTGGG 1 cut(s) 1401
BmsI GCATC 2 cut(s) 459, 600
BmuI ACTGGG 1 cut(s) 1401
BpiI GAAGAC 2 cut(s) 148, 1373
BpmI CTGGAG 1 cut(s) 1227
BpuEI CTTGAG 2 cut(s) 794, 1208
BpuMI CCSGG 2 cut(s) 765, 1101
Bsa29I ATCGAT 1 cut(s) 675
BsaBI GATNNNNATC 1 cut(s) 1049
BsaJI CCNNGG 7 cut(s) 63, 93, 300, 428, 645, 1100, 1144
BsaWI WCCGGW 1 cut(s) 87
BsaXI ACNNNNNCTCC 3 cut(s) 26, 154, 184
Bsc4I CCNNNNNNNGG 7 cut(s) 94, 125, 587, 770, 835, 891, 1095
Bse1I ACTGG 3 cut(s) 119, 775, 1396
Bse3DI GCAATG 2 cut(s) 534, 801
Bse8I GATNNNNATC 1 cut(s) 1049
BseCI ATCGAT 1 cut(s) 675
BseDI CCNNGG 7 cut(s) 63, 93, 300, 428, 645, 1100, 1144
BseGI GGATG 3 cut(s) 497, 1042, 1179
BseJI GATNNNNATC 1 cut(s) 1049
BseLI CCNNNNNNNGG 7 cut(s) 94, 125, 587, 770, 835, 891, 1095
BseMI GCAATG 2 cut(s) 534, 801
BseMII CTCAG 3 cut(s) 264, 854, 1350
BseNI ACTGG 3 cut(s) 119, 775, 1396
BseSI GKGCMC 3 cut(s) 254, 770, 884
BseX3I CGGCCG 1 cut(s) 1097
BseXI GCAGC 7 cut(s) 80, 220, 803, 844, 861, 1385, 1461
BseYI CCCAGC 1 cut(s) 877
BsgI GTGCAG 2 cut(s) 1120, 1275
Bsh1236I CGCG 2 cut(s) 214, 887
Bsh1285I CGRYCG 1 cut(s) 1100
BshFI GGCC 4 cut(s) 521, 644, 1099, 1163
BshNI GGYRCC 1 cut(s) 881
BshVI ATCGAT 1 cut(s) 675
BsiEI CGRYCG 1 cut(s) 1100
BsiHKAI GWGCWC 4 cut(s) 108, 254, 372, 660
BsiHKCI CYCGRG 1 cut(s) 326
BsiSI CCGG 3 cut(s) 88, 764, 1100
BslI CCNNNNNNNGG 7 cut(s) 94, 125, 587, 770, 835, 891, 1095
BsmAI GTCTC 1 cut(s) 629
BsmI GAATGC 1 cut(s) 574
BsnI GGCC 4 cut(s) 521, 644, 1099, 1163
BsoBI CYCGRG 1 cut(s) 326
Bsp1286I GDGCHC 7 cut(s) 108, 254, 299, 372, 660, 770, 884
Bsp1407I TGTACA 1 cut(s) 976
Bsp143I GATC 7 cut(s) 279, 418, 679, 906, 931, 940, 1044
Bsp19I CCATGG 3 cut(s) 63, 93, 645
BspACI CCGC 9 cut(s) 204, 236, 668, 885, 1086, 1096, 1256, 1352, 1464
BspANI GGCC 4 cut(s) 521, 644, 1099, 1163
BspCNI CTCAG 3 cut(s) 265, 855, 1351
BspDI ATCGAT 1 cut(s) 675
BspFNI CGCG 2 cut(s) 214, 887
BspLI GGNNCC 2 cut(s) 883, 1397
BspMAI CTGCAG 2 cut(s) 834, 1375
BspMI ACCTGC 1 cut(s) 837
BspPI GGATC 3 cut(s) 287, 413, 1052
BspQI GCTCTTC 2 cut(s) 89, 1254
BspT107I GGYRCC 1 cut(s) 881
BsrBI CCGCTC 1 cut(s) 204
BsrDI GCAATG 2 cut(s) 534, 801
BsrGI TGTACA 1 cut(s) 976
BsrI ACTGG 3 cut(s) 119, 775, 1396
BssECI CCNNGG 7 cut(s) 63, 93, 300, 428, 645, 1100, 1144
BssMI GATC 7 cut(s) 279, 418, 679, 906, 931, 940, 1044
BssNAI GTATAC 1 cut(s) 561
BssT1I CCWWGG 4 cut(s) 63, 93, 300, 645
Bst1107I GTATAC 1 cut(s) 561
Bst4CI ACNGT 2 cut(s) 928, 981
Bst6I CTCTTC 4 cut(s) 89, 692, 1254, 1265
BstAUI TGTACA 1 cut(s) 976
BstC8I GCNNGC 1 cut(s) 837
BstDEI CTNAG 3 cut(s) 273, 863, 1359
BstDSI CCRYGG 4 cut(s) 63, 93, 645, 1144
BstF5I GGATG 3 cut(s) 497, 1042, 1179
BstFNI CGCG 2 cut(s) 214, 887
BstH2I RGCGCY 1 cut(s) 445
BstHHI GCGC 4 cut(s) 216, 444, 1107, 1249
BstKTI GATC 7 cut(s) 282, 421, 682, 909, 934, 943, 1047
BstMAI GTCTC 1 cut(s) 629
BstMBI GATC 7 cut(s) 279, 418, 679, 906, 931, 940, 1044
BstMCI CGRYCG 1 cut(s) 1100
BstMWI GCNNNNNNNGC 5 cut(s) 65, 797, 1102, 1253, 1309
BstNSI RCATGY 2 cut(s) 1117, 1129
BstSCI CCNGG 2 cut(s) 763, 1099
BstSFI CTRYAG 2 cut(s) 830, 1371
BstSLI GKGCMC 3 cut(s) 254, 770, 884
BstUI CGCG 2 cut(s) 214, 887
BstV1I GCAGC 7 cut(s) 80, 220, 803, 844, 861, 1385, 1461
BstV2I GAAGAC 2 cut(s) 148, 1373
BstZ17I GTATAC 1 cut(s) 561
BstZI CGGCCG 1 cut(s) 1097
Bsu15I ATCGAT 1 cut(s) 675
BsuRI GGCC 4 cut(s) 521, 644, 1099, 1163
BsuTUI ATCGAT 1 cut(s) 675
BtgI CCRYGG 4 cut(s) 63, 93, 645, 1144
BtgZI GCGATG 1 cut(s) 1353
BtsCI GGATG 3 cut(s) 497, 1042, 1179
BtsIMutI CAGTG 2 cut(s) 270, 768
BveI ACCTGC 1 cut(s) 837
Cac8I GCNNGC 1 cut(s) 837
CfoI GCGC 4 cut(s) 216, 444, 1107, 1249
Cfr13I GGNCC 6 cut(s) 90, 432, 519, 649, 758, 859
ClaI ATCGAT 1 cut(s) 675
CseI GACGC 2 cut(s) 60, 533
Csp6I GTAC 3 cut(s) 390, 924, 977
CviAII CATG 8 cut(s) 64, 79, 94, 466, 646, 1108, 1114, 1126
CviQI GTAC 3 cut(s) 390, 924, 977
DdeI CTNAG 3 cut(s) 273, 863, 1359
DpnI GATC 7 cut(s) 281, 420, 681, 908, 933, 942, 1046
DpnII GATC 7 cut(s) 279, 418, 679, 906, 931, 940, 1044
DraI TTTAAA 1 cut(s) 1317
EaeI YGGCCR 2 cut(s) 642, 1097
EagI CGGCCG 1 cut(s) 1097
Eam1104I CTCTTC 4 cut(s) 89, 692, 1254, 1265
EarI CTCTTC 4 cut(s) 89, 692, 1254, 1265
EciI GGCGGA 1 cut(s) 1367
Ecl136II GAGCTC 3 cut(s) 106, 370, 658
EclXI CGGCCG 1 cut(s) 1097
Eco130I CCWWGG 4 cut(s) 63, 93, 300, 645
Eco24I GRGCYC 4 cut(s) 108, 299, 372, 660
Eco47I GGWCC 5 cut(s) 90, 432, 649, 758, 859
Eco47III AGCGCT 1 cut(s) 443
Eco52I CGGCCG 1 cut(s) 1097
Eco53kI GAGCTC 3 cut(s) 106, 370, 658
Eco88I CYCGRG 1 cut(s) 326
EcoICRI GAGCTC 3 cut(s) 106, 370, 658
EcoT14I CCWWGG 4 cut(s) 63, 93, 300, 645
EcoT38I GRGCYC 4 cut(s) 108, 299, 372, 660
ErhI CCWWGG 4 cut(s) 63, 93, 300, 645
FaeI CATG 8 cut(s) 67, 82, 97, 469, 649, 1111, 1117, 1129
FalI AAGNNNNNCTT 2 cut(s) 431, 463
FatI CATG 8 cut(s) 63, 78, 93, 465, 645, 1107, 1113, 1125
FauI CCCGC 1 cut(s) 1093
FblI GTMKAC 3 cut(s) 225, 560, 946
Fnu4HI GCNGC 8 cut(s) 69, 234, 792, 833, 875, 1097, 1374, 1450
FokI GGATG 3 cut(s) 504, 1049, 1166
FriOI GRGCYC 4 cut(s) 108, 299, 372, 660
Fsp4HI GCNGC 8 cut(s) 69, 234, 792, 833, 875, 1097, 1374, 1450
FspBI CTAG 4 cut(s) 185, 1026, 1079, 1467
GlaI GCGC 4 cut(s) 215, 443, 1106, 1248
GluI GCNGC 8 cut(s) 69, 234, 792, 833, 875, 1097, 1374, 1450
GsaI CCCAGC 1 cut(s) 881
GsuI CTGGAG 1 cut(s) 1227
HaeII RGCGCY 1 cut(s) 445
HaeIII GGCC 4 cut(s) 521, 644, 1099, 1163
HapII CCGG 3 cut(s) 88, 764, 1100
HgaI GACGC 2 cut(s) 60, 533
HhaI GCGC 4 cut(s) 216, 444, 1107, 1249
Hin1II CATG 8 cut(s) 67, 82, 97, 469, 649, 1111, 1117, 1129
Hin6I GCGC 4 cut(s) 214, 442, 1105, 1247
HinP1I GCGC 4 cut(s) 214, 442, 1105, 1247
HincII GTYRAC 2 cut(s) 947, 984
HindII GTYRAC 2 cut(s) 947, 984
HindIII AAGCTT 1 cut(s) 1310
HpaII CCGG 3 cut(s) 88, 764, 1100
HphI GGTGA 3 cut(s) 172, 1187, 1249
Hpy166II GTNNAC 5 cut(s) 226, 252, 561, 947, 984
Hpy188I TCNGA 5 cut(s) 284, 323, 429, 436, 859
Hpy188III TCNNGA 7 cut(s) 160, 328, 512, 614, 634, 851, 993
Hpy8I GTNNAC 5 cut(s) 226, 252, 561, 947, 984
Hpy99I CGWCG 4 cut(s) 40, 43, 527, 948
HpyAV CCTTC 7 cut(s) 39, 353, 697, 720, 1100, 1292, 1328
HpyCH4III ACNGT 2 cut(s) 928, 981
HpyCH4IV ACGT 6 cut(s) 132, 153, 629, 843, 1251, 1456
HpyCH4V TGCA 8 cut(s) 252, 472, 626, 832, 1117, 1137, 1292, 1373
HpyF10VI GCNNNNNNNGC 5 cut(s) 65, 797, 1102, 1253, 1309
HpyF3I CTNAG 3 cut(s) 273, 863, 1359
HpySE526I ACGT 6 cut(s) 132, 153, 629, 843, 1251, 1456
Hsp92II CATG 8 cut(s) 67, 82, 97, 469, 649, 1111, 1117, 1129
HspAI GCGC 4 cut(s) 214, 442, 1105, 1247
Kzo9I GATC 7 cut(s) 279, 418, 679, 906, 931, 940, 1044
LguI GCTCTTC 2 cut(s) 89, 1254
LmnI GCTCC 1 cut(s) 269
Lsp1109I GCAGC 7 cut(s) 80, 220, 803, 844, 861, 1385, 1461
LweI GCATC 2 cut(s) 459, 600
MaeI CTAG 4 cut(s) 185, 1026, 1079, 1467
MaeII ACGT 6 cut(s) 132, 153, 629, 843, 1251, 1456
MaeIII GTNAC 2 cut(s) 851, 1237
MalI GATC 7 cut(s) 281, 420, 681, 908, 933, 942, 1046
MbiI CCGCTC 1 cut(s) 204
MboI GATC 7 cut(s) 279, 418, 679, 906, 931, 940, 1044
MhlI GDGCHC 7 cut(s) 108, 254, 299, 372, 660, 770, 884
MlsI TGGCCA 1 cut(s) 644
MluCI AATT 3 cut(s) 802, 1328, 1477
MluNI TGGCCA 1 cut(s) 644
MlyI GAGTC 6 cut(s) 157, 318, 611, 631, 848, 1234
MmeI TCCRAC 1 cut(s) 291
Mox20I TGGCCA 1 cut(s) 644
MroXI GAANNNNTTC 2 cut(s) 8, 707
MscI TGGCCA 1 cut(s) 644
MseI TTAA 4 cut(s) 684, 1308, 1316, 1486
MslI CAYNNNNRTG 3 cut(s) 954, 1112, 1124
Msp20I TGGCCA 1 cut(s) 644
MspA1I CMGCKG 1 cut(s) 835
MspI CCGG 3 cut(s) 88, 764, 1100
MspR9I CCNGG 2 cut(s) 765, 1101
Mva1269I GAATGC 1 cut(s) 574
MvnI CGCG 2 cut(s) 214, 887
MwoI GCNNNNNNNGC 5 cut(s) 65, 797, 1102, 1253, 1309
NciI CCSGG 2 cut(s) 765, 1101
NcoI CCATGG 3 cut(s) 63, 93, 645
NdeII GATC 7 cut(s) 279, 418, 679, 906, 931, 940, 1044
NlaIII CATG 8 cut(s) 67, 82, 97, 469, 649, 1111, 1117, 1129
NlaIV GGNNCC 2 cut(s) 883, 1397
NmuCI GTSAC 2 cut(s) 851, 1237
NspI RCATGY 2 cut(s) 1117, 1129
PaeR7I CTCGAG 1 cut(s) 326
PciI ACATGT 1 cut(s) 1125
PciSI GCTCTTC 2 cut(s) 89, 1254
PcsI WCGNNNNNNNCGW 1 cut(s) 333
PctI GAATGC 1 cut(s) 574
PdmI GAANNNNTTC 2 cut(s) 8, 707
PfeI GAWTC 5 cut(s) 197, 395, 898, 1149, 1431
PkrI GCNGC 8 cut(s) 70, 235, 793, 834, 876, 1098, 1375, 1451
PleI GAGTC 6 cut(s) 157, 318, 610, 631, 848, 1234
PpsI GAGTC 6 cut(s) 157, 318, 610, 631, 848, 1234
PscI ACATGT 1 cut(s) 1125
Psp124BI GAGCTC 3 cut(s) 108, 372, 660
Psp1406I AACGTT 3 cut(s) 629, 843, 1456
PspFI CCCAGC 1 cut(s) 877
PspN4I GGNNCC 2 cut(s) 883, 1397
PspPI GGNCC 6 cut(s) 90, 432, 519, 649, 758, 859
PstI CTGCAG 2 cut(s) 834, 1375
PvuII CAGCTG 1 cut(s) 835
RsaI GTAC 3 cut(s) 391, 925, 978
RsaNI GTAC 3 cut(s) 390, 924, 977
RseI CAYNNNNRTG 3 cut(s) 954, 1112, 1124
SacI GAGCTC 3 cut(s) 108, 372, 660
SalI GTCGAC 1 cut(s) 945
SapI GCTCTTC 2 cut(s) 89, 1254
SaqAI TTAA 4 cut(s) 684, 1308, 1316, 1486
SatI GCNGC 8 cut(s) 69, 234, 792, 833, 875, 1097, 1374, 1450
Sau3AI GATC 7 cut(s) 279, 418, 679, 906, 931, 940, 1044
Sau96I GGNCC 6 cut(s) 90, 432, 519, 649, 758, 859
SchI GAGTC 6 cut(s) 157, 318, 611, 631, 848, 1234
ScrFI CCNGG 2 cut(s) 765, 1101
SduI GDGCHC 7 cut(s) 108, 254, 299, 372, 660, 770, 884
SfaNI GCATC 2 cut(s) 459, 600
SfcI CTRYAG 2 cut(s) 830, 1371
Sfr274I CTCGAG 1 cut(s) 326
SinI GGWCC 5 cut(s) 90, 432, 649, 758, 859
SlaI CTCGAG 1 cut(s) 326
SmiMI CAYNNNNRTG 3 cut(s) 954, 1112, 1124
SmlI CTYRAG 3 cut(s) 326, 809, 1223
SmoI CTYRAG 3 cut(s) 326, 809, 1223
Sse9I AATT 3 cut(s) 802, 1328, 1477
SsiI CCGC 9 cut(s) 204, 236, 668, 885, 1086, 1096, 1256, 1352, 1464
SspMI CTAG 4 cut(s) 185, 1026, 1079, 1467
SstI GAGCTC 3 cut(s) 108, 372, 660
StyD4I CCNGG 2 cut(s) 763, 1099
StyI CCWWGG 4 cut(s) 63, 93, 300, 645
TaaI ACNGT 2 cut(s) 928, 981
TaiI ACGT 6 cut(s) 135, 156, 632, 846, 1254, 1459
TasI AATT 3 cut(s) 802, 1328, 1477
TatI WGTACW 1 cut(s) 976
TauI GCSGC 1 cut(s) 1099
TfiI GAWTC 5 cut(s) 197, 395, 898, 1149, 1431
Tru1I TTAA 4 cut(s) 684, 1308, 1316, 1486
Tru9I TTAA 4 cut(s) 684, 1308, 1316, 1486
TscAI CASTG 2 cut(s) 277, 775
TseFI GTSAC 2 cut(s) 851, 1237
TseI GCWGC 7 cut(s) 68, 233, 791, 832, 874, 1373, 1449
Tsp45I GTSAC 2 cut(s) 851, 1237
TspDTI ATGAA 7 cut(s) 17, 372, 545, 552, 997, 1283, 1356
TspGWI ACGGA 5 cut(s) 24, 407, 1161, 1218, 1247
TspRI CASTG 2 cut(s) 277, 775
VneI GTGCAC 1 cut(s) 250
VpaK11BI GGWCC 5 cut(s) 90, 432, 649, 758, 859
XceI RCATGY 2 cut(s) 1117, 1129
XhoI CTCGAG 1 cut(s) 326
XmiI GTMKAC 3 cut(s) 225, 560, 946
XmnI GAANNNNTTC 2 cut(s) 8, 707
XspI CTAG 4 cut(s) 185, 1026, 1079, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.