Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0014905

Physical Location & Seq

Genomic Coordinates Forward (+)

80079519 .. 80082256

Gene Structure 2738 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00141830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGATGTTCTCCGCCAAAGAAATGCCTTCTCCTTCATCATTGTTCTCTGCTTATGCATCCATGGCAGCCTCAATGATGCTATTTAGATCCATGGCCAATGAGCTAGTACCTCAGCCAGTTAGAGGCTACCTTTACTCAACTCTCCACTACATCTTCAAAACTCACTCCACTATGCTCACACTAGTCATCGAGGAATCGAATAGCATAAGCCGAAACCAACTCTATGATGCTGCAGAGGTTTACTTGTGCACGAGGATCAGTTCCAAGACTGACAGGCTCAAAATCAGCAAAACCCCGAAAGCTAATAACTTAACAATTCGGCTCGAGAAAGGTGAGAAGTTGGTGGATTTCTATGAAGGGATTGAGCTCCAGTGGAAGTTTGTTTGTGCCGAGTCTGGACAGAACAACCCCAATGATCCATTTTCGCCTCCAAGGTCCGAAAAGAGGTTCTTTGAGCTCAAGTTCCACAAGAAGCACAAGGACAAAATCTTGGATTGTTATGTGCCTTATGTTGTTGAAAGGGCCAAAGCAATCAAAGATGAAGAAAGGGTTTTGAAGATGTACACATTAAACAGTTCCGGCCACCACCACCCTTACAATGGCTTCAAGTGGGACTCCATCAACCTCGAACACCCTTCAACATTTGAGACTCTGGCCATGGATTTGGAGCTCAAGAATGCTGTTATTGAAGATCTTAACAGGTTTGTGAAGAGGAAGGACTTCTATAAGAAAGTAGGGAGGGCATGGAAAAGAGGGTACTTGTTGTATGGTCCTCCAGGCACTGGAAAATCAAGCTTGGTTGCAGCCATGGCTAACCATCTCAAGTTTGATGTCTATGACTTGCAGCTTGCTAATATATTTCGTGATTCTGACCTGAGAAAACTGTTGCTGGCCACCGCAAATCGGTCCATTCTTGTGATTGAAGACATTGATTGTAGTGTTGATTTGCCTGATCGGGTTCGACATGGAGATGGAAGAAAGCAAGTGCCTGATGTACAGTTGACACTATCTGGACTACTGAACTTCATAGATGGATTATGGTCTAGTTGTGGAGATGAGAGGATCATAATATTTACCACTAATCACAAGGAGAGGTTAGACCCTGCCCTATTGCGCCCTGGACGCATGGACATGCATATTCACATGTCCTATTGCACATACCATGGCTTCCAACTCTTGGCCTCAAACTACTTGGGTATCCAGGACCACCACTACCTCTATGATGAAATCGAAGGCTTGCTGAAAGAAACAGAGGTGACTCCTGCGCAAGTAGCAGAAGAGTTGATGAAGAGTGAAGAAGTTGATATTGCACTTGAAGGACTGGTCAAGCTTTTAAAGCGGAAGAAGATGGAAGGAGATGAATGCGAGGTTGAGAATGAAAAGAAGATCGGGCCGAAAGGAGCAAAGAGGCAGAAAACTGAGAACAAACAGAAGAAACCTGTGAGGAATAGTAGGAAAAACACCACCAAAAGATGCAGCAACCGTTTATCAGCTAAAGCCAACTATTATGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

504

Amino Acids

57.99

Weight (kDa)

8.98

Isoelectric Point (pI)

51.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	36 - 129	1.9e-23	Domain associated at C-terminal with AAA
AAA	PF00004	253 - 383	4.2e-20	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	385 - 451	1.3e-22	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014905)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17760 AT5G17760
fragaria_vesca	FvH4_1g12741
malus_domestica	MD02G1141700.v1.1 MD15G1254600.v1.1
prunus_persica	Prupe.7G159000_v2.0.a1
pyrus_communis	pycom02g11170 pycom15g22370
rosa_chinensis	RchiOBHm_Chr2g0100821
rosa_laevigata	RLG00000017014
rosa_multiflora	Rmu_sc0001659.1_g000021
rosa_roxburghii	Rroxscaffold_2G00141830
rosa_rugosa	Rorug02G0093100
rosa_samantha	Rh2CG146700 Rh2DG146100
rosa_wichuraiana	Rw2G011010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1266
AccB7I	CCANNNNNTGG	2 cut(s)	782, 1177
AciI	CCGC	3 cut(s)	12, 897, 1339
AclWI	GGATC	4 cut(s)	81, 263, 410, 1070
AcoI	YGGCCR	4 cut(s)	93, 580, 654, 891
AfaI	GTAC	4 cut(s)	108, 563, 758, 996
AfiI	CCNNNNNNNGG	6 cut(s)	122, 444, 599, 782, 903, 1177
AflIII	ACRYGT	1 cut(s)	1143
AgsI	TTSAA	8 cut(s)	157, 518, 556, 607, 639, 689, 923, 1316
AhlI	ACTAGT	1 cut(s)	181
AjnI	CCWGG	3 cut(s)	775, 1117, 1200
AluBI	AGCT	9 cut(s)	103, 302, 367, 457, 670, 795, 847, 1330, 1493
AluI	AGCT	9 cut(s)	103, 302, 367, 457, 670, 795, 847, 1330, 1493
Alw21I	GWGCWC	4 cut(s)	251, 369, 459, 672
Alw26I	GTCTC	1 cut(s)	641
Alw44I	GTGCAC	1 cut(s)	247
AlwI	GGATC	4 cut(s)	81, 263, 410, 1070
AlwNI	CAGNNNCTG	1 cut(s)	782
Ama87I	CYCGRG	1 cut(s)	323
AoxI	GGCC	7 cut(s)	93, 522, 580, 654, 891, 1179, 1391
ApaLI	GTGCAC	1 cut(s)	247
ApeKI	GCWGC	5 cut(s)	65, 230, 803, 844, 1476
Asp700I	GAANNNNTTC	1 cut(s)	719
AspLEI	GCGC	2 cut(s)	1116, 1267
AspS9I	GGNCC	6 cut(s)	435, 522, 770, 906, 1204, 1391
AsuHPI	GGTGA	2 cut(s)	344, 1267
AvaI	CYCGRG	1 cut(s)	323
AvaII	GGWCC	4 cut(s)	435, 770, 906, 1204
BaeGI	GKGCMC	1 cut(s)	251
BaeI	ACNNNNGTAYC	2 cut(s)	1180, 1213
BalI	TGGCCA	3 cut(s)	95, 656, 893
BanII	GRGCYC	3 cut(s)	369, 459, 672
BauI	CACGAG	1 cut(s)	250
BbsI	GAAGAC	1 cut(s)	930
Bbv12I	GWGCWC	4 cut(s)	251, 369, 459, 672
BbvCI	CCTCAGC	1 cut(s)	111
BbvI	GCAGC	5 cut(s)	77, 217, 815, 856, 1488
BccI	CCATC	5 cut(s)	626, 825, 965, 1025, 1342
BciT130I	CCWGG	3 cut(s)	777, 1119, 1202
BciVI	GTATCC	1 cut(s)	1208
BcoDI	GTCTC	1 cut(s)	641
BcuI	ACTAGT	1 cut(s)	181
BfaI	CTAG	3 cut(s)	104, 182, 1044
BfmI	CTRYAG	1 cut(s)	231
BfuI	GTATCC	1 cut(s)	1208
BglII	AGATCT	1 cut(s)	691
BisI	GCNGC	5 cut(s)	66, 231, 804, 845, 1477
BlsI	GCNGC	5 cut(s)	67, 232, 805, 846, 1478
Bme1390I	CCNGG	3 cut(s)	777, 1119, 1202
Bme18I	GGWCC	4 cut(s)	435, 770, 906, 1204
BmeT110I	CYCGRG	1 cut(s)	323
BmgT120I	GGNCC	6 cut(s)	435, 522, 770, 906, 1204, 1391
BmrFI	CCNGG	3 cut(s)	777, 1119, 1202
BmsI	GCATC	4 cut(s)	65, 66, 217, 1463
BpiI	GAAGAC	1 cut(s)	930
BpmI	CTGGAG	2 cut(s)	353, 759
Bpu10I	CCTNAGC	1 cut(s)	111
BpuEI	CTTGAG	3 cut(s)	443, 656, 806
BsaJI	CCNNGG	7 cut(s)	60, 90, 431, 657, 807, 1117, 1162
Bsc4I	CCNNNNNNNGG	6 cut(s)	122, 444, 599, 782, 903, 1177
Bse1I	ACTGG	4 cut(s)	116, 370, 787, 1326
BseBI	CCWGG	3 cut(s)	777, 1119, 1202
BseDI	CCNNGG	7 cut(s)	60, 90, 431, 657, 807, 1117, 1162
BseGI	GGATG	1 cut(s)	56
BseLI	CCNNNNNNNGG	6 cut(s)	122, 444, 599, 782, 903, 1177
BseMII	CTCAG	3 cut(s)	125, 866, 1410
BseNI	ACTGG	4 cut(s)	116, 370, 787, 1326
BseSI	GKGCMC	1 cut(s)	251
BseXI	GCAGC	5 cut(s)	77, 217, 815, 856, 1488
BshFI	GGCC	7 cut(s)	95, 524, 582, 656, 893, 1181, 1393
BsiHKAI	GWGCWC	4 cut(s)	251, 369, 459, 672
BsiHKCI	CYCGRG	1 cut(s)	323
BsiSI	CCGG	1 cut(s)	579
BslFI	GGGAC	1 cut(s)	626
BslI	CCNNNNNNNGG	6 cut(s)	122, 444, 599, 782, 903, 1177
BsmAI	GTCTC	1 cut(s)	641
BsmFI	GGGAC	1 cut(s)	626
BsmI	GAATGC	2 cut(s)	682, 1367
BsnI	GGCC	7 cut(s)	95, 524, 582, 656, 893, 1181, 1393
BsoBI	CYCGRG	1 cut(s)	323
Bsp1286I	GDGCHC	4 cut(s)	251, 369, 459, 672
Bsp1407I	TGTACA	2 cut(s)	561, 994
Bsp143I	GATC	7 cut(s)	86, 255, 415, 691, 952, 1062, 1386
Bsp19I	CCATGG	5 cut(s)	60, 90, 657, 807, 1162
BspACI	CCGC	3 cut(s)	12, 897, 1339
BspANI	GGCC	7 cut(s)	95, 524, 582, 656, 893, 1181, 1393
BspCNI	CTCAG	3 cut(s)	124, 867, 1411
BspMAI	CTGCAG	1 cut(s)	235
BspPI	GGATC	4 cut(s)	81, 263, 410, 1070
BsrGI	TGTACA	2 cut(s)	561, 994
BsrI	ACTGG	4 cut(s)	116, 370, 787, 1326
BssECI	CCNNGG	7 cut(s)	60, 90, 431, 657, 807, 1117, 1162
BssMI	GATC	7 cut(s)	86, 255, 415, 691, 952, 1062, 1386
BssSI	CACGAG	1 cut(s)	250
BssT1I	CCWWGG	6 cut(s)	60, 90, 431, 657, 807, 1162
Bst2BI	CACGAG	1 cut(s)	250
Bst2UI	CCWGG	3 cut(s)	777, 1119, 1202
Bst4CI	ACNGT	4 cut(s)	575, 885, 999, 1484
Bst6I	CTCTTC	3 cut(s)	704, 1272, 1283
BstAUI	TGTACA	2 cut(s)	561, 994
BstC8I	GCNNGC	3 cut(s)	849, 891, 1238
BstDEI	CTNAG	3 cut(s)	111, 875, 1419
BstDSI	CCRYGG	5 cut(s)	60, 90, 657, 807, 1162
BstF5I	GGATG	1 cut(s)	56
BstHHI	GCGC	2 cut(s)	1116, 1267
BstKTI	GATC	7 cut(s)	89, 258, 418, 694, 955, 1065, 1389
BstMAI	GTCTC	1 cut(s)	641
BstMBI	GATC	7 cut(s)	86, 255, 415, 691, 952, 1062, 1386
BstMWI	GCNNNNNNNGC	5 cut(s)	62, 809, 1122, 1271, 1336
BstNI	CCWGG	3 cut(s)	777, 1119, 1202
BstNSI	RCATGY	2 cut(s)	1135, 1147
BstSCI	CCNGG	3 cut(s)	775, 1117, 1200
BstSFI	CTRYAG	1 cut(s)	231
BstSLI	GKGCMC	1 cut(s)	251
BstV1I	GCAGC	5 cut(s)	77, 217, 815, 856, 1488
BstV2I	GAAGAC	1 cut(s)	930
BstX2I	RGATCY	2 cut(s)	86, 691
BstXI	CCANNNNNNTGG	1 cut(s)	664
BstYI	RGATCY	2 cut(s)	86, 691
BsuI	GTATCC	1 cut(s)	1208
BsuRI	GGCC	7 cut(s)	95, 524, 582, 656, 893, 1181, 1393
BtgI	CCRYGG	5 cut(s)	60, 90, 657, 807, 1162
BtsCI	GGATG	1 cut(s)	56
BtsIMutI	CAGTG	2 cut(s)	377, 780
Cac8I	GCNNGC	3 cut(s)	849, 891, 1238
CaiI	CAGNNNCTG	1 cut(s)	782
CfoI	GCGC	2 cut(s)	1116, 1267
Cfr13I	GGNCC	6 cut(s)	435, 522, 770, 906, 1204, 1391
CseI	GACGC	1 cut(s)	1131
Csp6I	GTAC	4 cut(s)	107, 562, 757, 995
CviQI	GTAC	4 cut(s)	107, 562, 757, 995
DdeI	CTNAG	3 cut(s)	111, 875, 1419
DpnI	GATC	7 cut(s)	88, 257, 417, 693, 954, 1064, 1388
DpnII	GATC	7 cut(s)	86, 255, 415, 691, 952, 1062, 1386
DraI	TTTAAA	1 cut(s)	1335
EaeI	YGGCCR	4 cut(s)	93, 580, 654, 891
Eam1104I	CTCTTC	3 cut(s)	704, 1272, 1283
EarI	CTCTTC	3 cut(s)	704, 1272, 1283
Ecl136II	GAGCTC	3 cut(s)	367, 457, 670
Eco130I	CCWWGG	6 cut(s)	60, 90, 431, 657, 807, 1162
Eco24I	GRGCYC	3 cut(s)	369, 459, 672
Eco47I	GGWCC	4 cut(s)	435, 770, 906, 1204
Eco53kI	GAGCTC	3 cut(s)	367, 457, 670
Eco88I	CYCGRG	1 cut(s)	323
EcoICRI	GAGCTC	3 cut(s)	367, 457, 670
EcoRII	CCWGG	3 cut(s)	775, 1117, 1200
EcoT14I	CCWWGG	6 cut(s)	60, 90, 431, 657, 807, 1162
EcoT22I	ATGCAT	3 cut(s)	58, 1137, 1513
EcoT38I	GRGCYC	3 cut(s)	369, 459, 672
ErhI	CCWWGG	6 cut(s)	60, 90, 431, 657, 807, 1162
FalI	AAGNNNNNCTT	2 cut(s)	434, 466
FaqI	GGGAC	1 cut(s)	626
Fnu4HI	GCNGC	5 cut(s)	66, 231, 804, 845, 1477
FokI	GGATG	1 cut(s)	43
FriOI	GRGCYC	3 cut(s)	369, 459, 672
Fsp4HI	GCNGC	5 cut(s)	66, 231, 804, 845, 1477
FspBI	CTAG	3 cut(s)	104, 182, 1044
FspI	TGCGCA	1 cut(s)	1266
GlaI	GCGC	2 cut(s)	1115, 1266
GluI	GCNGC	5 cut(s)	66, 231, 804, 845, 1477
GsuI	CTGGAG	2 cut(s)	353, 759
HaeIII	GGCC	7 cut(s)	95, 524, 582, 656, 893, 1181, 1393
HapII	CCGG	1 cut(s)	579
HgaI	GACGC	1 cut(s)	1131
HhaI	GCGC	2 cut(s)	1116, 1267
Hin6I	GCGC	2 cut(s)	1114, 1265
HinP1I	GCGC	2 cut(s)	1114, 1265
HincII	GTYRAC	1 cut(s)	1002
HindII	GTYRAC	1 cut(s)	1002
HindIII	AAGCTT	2 cut(s)	793, 1328
HinfI	GANTC	6 cut(s)	194, 392, 614, 649, 866, 1258
HpaII	CCGG	1 cut(s)	579
HphI	GGTGA	2 cut(s)	344, 1267
Hpy166II	GTNNAC	4 cut(s)	241, 249, 564, 1002
Hpy188I	TCNGA	2 cut(s)	439, 871
Hpy188III	TCNNGA	5 cut(s)	325, 396, 673, 863, 1011
Hpy8I	GTNNAC	4 cut(s)	241, 249, 564, 1002
HpyAV	CCTTC	8 cut(s)	36, 42, 350, 645, 709, 1226, 1310, 1346
HpyCH4III	ACNGT	4 cut(s)	575, 885, 999, 1484
HpyF10VI	GCNNNNNNNGC	5 cut(s)	62, 809, 1122, 1271, 1336
HpyF3I	CTNAG	3 cut(s)	111, 875, 1419
HspAI	GCGC	2 cut(s)	1114, 1265
Kzo9I	GATC	7 cut(s)	86, 255, 415, 691, 952, 1062, 1386
LmnI	GCTCC	3 cut(s)	372, 667, 1400
Lsp1109I	GCAGC	5 cut(s)	77, 217, 815, 856, 1488
LweI	GCATC	4 cut(s)	65, 66, 217, 1463
MaeI	CTAG	3 cut(s)	104, 182, 1044
MaeIII	GTNAC	1 cut(s)	1255
MalI	GATC	7 cut(s)	88, 257, 417, 693, 954, 1064, 1388
MboI	GATC	7 cut(s)	86, 255, 415, 691, 952, 1062, 1386
MflI	RGATCY	2 cut(s)	86, 691
MhlI	GDGCHC	4 cut(s)	251, 369, 459, 672
MlsI	TGGCCA	3 cut(s)	95, 656, 893
MluCI	AATT	1 cut(s)	315
MluNI	TGGCCA	3 cut(s)	95, 656, 893
MlyI	GAGTC	4 cut(s)	401, 608, 643, 1252
MmeI	TCCRAC	1 cut(s)	1195
Mox20I	TGGCCA	3 cut(s)	95, 656, 893
Mph1103I	ATGCAT	3 cut(s)	58, 1137, 1513
MroXI	GAANNNNTTC	1 cut(s)	719
MscI	TGGCCA	3 cut(s)	95, 656, 893
MseI	TTAA	4 cut(s)	311, 569, 696, 1334
MslI	CAYNNNNRTG	3 cut(s)	914, 969, 1130
Msp20I	TGGCCA	3 cut(s)	95, 656, 893
MspI	CCGG	1 cut(s)	579
MspR9I	CCNGG	3 cut(s)	777, 1119, 1202
Mva1269I	GAATGC	2 cut(s)	682, 1367
MvaI	CCWGG	3 cut(s)	777, 1119, 1202
MwoI	GCNNNNNNNGC	5 cut(s)	62, 809, 1122, 1271, 1336
NcoI	CCATGG	5 cut(s)	60, 90, 657, 807, 1162
NdeII	GATC	7 cut(s)	86, 255, 415, 691, 952, 1062, 1386
NmeAIII	GCCGAG	1 cut(s)	415
NmuCI	GTSAC	1 cut(s)	1255
NsbI	TGCGCA	1 cut(s)	1266
NsiI	ATGCAT	3 cut(s)	58, 1137, 1513
NspI	RCATGY	2 cut(s)	1135, 1147
PaeR7I	CTCGAG	1 cut(s)	323
PciI	ACATGT	1 cut(s)	1143
PctI	GAATGC	2 cut(s)	682, 1367
PdmI	GAANNNNTTC	1 cut(s)	719
PfeI	GAWTC	2 cut(s)	194, 866
PflMI	CCANNNNNTGG	2 cut(s)	782, 1177
PfoI	TCCNGGA	1 cut(s)	1200
PkrI	GCNGC	5 cut(s)	67, 232, 805, 846, 1478
PleI	GAGTC	4 cut(s)	400, 608, 643, 1252
PpsI	GAGTC	4 cut(s)	400, 608, 643, 1252
PscI	ACATGT	1 cut(s)	1143
Psp124BI	GAGCTC	3 cut(s)	369, 459, 672
Psp6I	CCWGG	3 cut(s)	775, 1117, 1200
PspGI	CCWGG	3 cut(s)	775, 1117, 1200
PspPI	GGNCC	6 cut(s)	435, 522, 770, 906, 1204, 1391
PstI	CTGCAG	1 cut(s)	235
PstNI	CAGNNNCTG	1 cut(s)	782
PsuI	RGATCY	2 cut(s)	86, 691
RsaI	GTAC	4 cut(s)	108, 563, 758, 996
RsaNI	GTAC	4 cut(s)	107, 562, 757, 995
RseI	CAYNNNNRTG	3 cut(s)	914, 969, 1130
SacI	GAGCTC	3 cut(s)	369, 459, 672
SaqAI	TTAA	4 cut(s)	311, 569, 696, 1334
SatI	GCNGC	5 cut(s)	66, 231, 804, 845, 1477
Sau3AI	GATC	7 cut(s)	86, 255, 415, 691, 952, 1062, 1386
Sau96I	GGNCC	6 cut(s)	435, 522, 770, 906, 1204, 1391
SchI	GAGTC	4 cut(s)	401, 608, 643, 1252
ScrFI	CCNGG	3 cut(s)	777, 1119, 1202
SduI	GDGCHC	4 cut(s)	251, 369, 459, 672
SfaNI	GCATC	4 cut(s)	65, 66, 217, 1463
SfcI	CTRYAG	1 cut(s)	231
Sfr274I	CTCGAG	1 cut(s)	323
SinI	GGWCC	4 cut(s)	435, 770, 906, 1204
SlaI	CTCGAG	1 cut(s)	323
SmiMI	CAYNNNNRTG	3 cut(s)	914, 969, 1130
SmlI	CTYRAG	4 cut(s)	323, 458, 671, 821
SmoI	CTYRAG	4 cut(s)	323, 458, 671, 821
SpeI	ACTAGT	1 cut(s)	181
Sse9I	AATT	1 cut(s)	315
SsiI	CCGC	3 cut(s)	12, 897, 1339
SspI	AATATT	1 cut(s)	1071
SspMI	CTAG	3 cut(s)	104, 182, 1044
SstI	GAGCTC	3 cut(s)	369, 459, 672
StyD4I	CCNGG	3 cut(s)	775, 1117, 1200
StyI	CCWWGG	6 cut(s)	60, 90, 431, 657, 807, 1162
TaaI	ACNGT	4 cut(s)	575, 885, 999, 1484
TaqI	TCGA	6 cut(s)	189, 197, 324, 627, 961, 1230
TaqII	GACCGA	1 cut(s)	894
TasI	AATT	1 cut(s)	315
TatI	WGTACW	2 cut(s)	561, 994
TfiI	GAWTC	2 cut(s)	194, 866
Tru1I	TTAA	4 cut(s)	311, 569, 696, 1334
Tru9I	TTAA	4 cut(s)	311, 569, 696, 1334
TscAI	CASTG	2 cut(s)	377, 787
TseFI	GTSAC	1 cut(s)	1255
TseI	GCWGC	5 cut(s)	65, 230, 803, 844, 1476
Tsp45I	GTSAC	1 cut(s)	1255
TspDTI	ATGAA	8 cut(s)	24, 369, 555, 1015, 1239, 1301, 1374, 1392
TspRI	CASTG	2 cut(s)	377, 787
Van91I	CCANNNNNTGG	2 cut(s)	782, 1177
VneI	GTGCAC	1 cut(s)	247
VpaK11BI	GGWCC	4 cut(s)	435, 770, 906, 1204
XceI	RCATGY	2 cut(s)	1135, 1147
XcmI	CCANNNNNNNNNTGG	1 cut(s)	596
XhoI	CTCGAG	1 cut(s)	323
XmnI	GAANNNNTTC	1 cut(s)	719
XspI	CTAG	3 cut(s)	104, 182, 1044
Zsp2I	ATGCAT	3 cut(s)	58, 1137, 1513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.