Belongs to the AAA ATPase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17760 AT5G17760 |
| fragaria_vesca | FvH4_1g12741 |
| malus_domestica | MD02G1141700.v1.1 MD15G1254600.v1.1 |
| prunus_persica | Prupe.7G159000_v2.0.a1 |
| pyrus_communis | pycom02g11170 pycom15g22370 |
| rosa_chinensis | RchiOBHm_Chr2g0100821 |
| rosa_laevigata | RLG00000017014 |
| rosa_multiflora | Rmu_sc0001659.1_g000021 |
| rosa_roxburghii | Rroxscaffold_2G00141830 |
| rosa_rugosa | Rorug02G0093100 |
| rosa_samantha | Rh2CG146700 Rh2DG146100 |
| rosa_wichuraiana | Rw2G011010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1266 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 782, 1177 |
| AciI | CCGC | 4 cut(s) | 12, 145, 897, 1339 |
| AclWI | GGATC | 4 cut(s) | 81, 263, 410, 1070 |
| AcoI | YGGCCR | 3 cut(s) | 93, 654, 891 |
| AfaI | GTAC | 5 cut(s) | 108, 388, 563, 758, 996 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 122, 444, 599, 782, 903, 1177 |
| AflIII | ACRYGT | 1 cut(s) | 1143 |
| AgsI | TTSAA | 8 cut(s) | 157, 518, 556, 607, 639, 689, 923, 1316 |
| AhlI | ACTAGT | 1 cut(s) | 181 |
| AjnI | CCWGG | 2 cut(s) | 775, 1117 |
| Alw21I | GWGCWC | 4 cut(s) | 251, 369, 459, 672 |
| Alw26I | GTCTC | 1 cut(s) | 641 |
| Alw44I | GTGCAC | 1 cut(s) | 247 |
| AlwI | GGATC | 4 cut(s) | 81, 263, 410, 1070 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 782 |
| Ama87I | CYCGRG | 1 cut(s) | 323 |
| AoxI | GGCC | 5 cut(s) | 93, 522, 654, 891, 1179 |
| ApaLI | GTGCAC | 1 cut(s) | 247 |
| ApeKI | GCWGC | 5 cut(s) | 65, 230, 803, 844, 1476 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 719 |
| AspLEI | GCGC | 2 cut(s) | 1116, 1267 |
| AspS9I | GGNCC | 4 cut(s) | 435, 522, 770, 906 |
| AsuHPI | GGTGA | 3 cut(s) | 344, 575, 1267 |
| AvaI | CYCGRG | 1 cut(s) | 323 |
| AvaII | GGWCC | 3 cut(s) | 435, 770, 906 |
| BaeGI | GKGCMC | 1 cut(s) | 251 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1180, 1213 |
| BalI | TGGCCA | 3 cut(s) | 95, 656, 893 |
| BanII | GRGCYC | 3 cut(s) | 369, 459, 672 |
| BauI | CACGAG | 1 cut(s) | 250 |
| BbsI | GAAGAC | 1 cut(s) | 930 |
| Bbv12I | GWGCWC | 4 cut(s) | 251, 369, 459, 672 |
| BbvCI | CCTCAGC | 1 cut(s) | 111 |
| BbvI | GCAGC | 5 cut(s) | 77, 217, 815, 856, 1488 |
| BccI | CCATC | 5 cut(s) | 626, 825, 965, 1025, 1342 |
| BciT130I | CCWGG | 2 cut(s) | 777, 1119 |
| BciVI | GTATCC | 1 cut(s) | 1208 |
| BcoDI | GTCTC | 1 cut(s) | 641 |
| BcuI | ACTAGT | 1 cut(s) | 181 |
| BfaI | CTAG | 3 cut(s) | 104, 182, 1044 |
| BfmI | CTRYAG | 1 cut(s) | 231 |
| BfuI | GTATCC | 1 cut(s) | 1208 |
| BglII | AGATCT | 1 cut(s) | 691 |
| BisI | GCNGC | 5 cut(s) | 66, 231, 804, 845, 1477 |
| BlsI | GCNGC | 5 cut(s) | 67, 232, 805, 846, 1478 |
| Bme1390I | CCNGG | 2 cut(s) | 777, 1119 |
| Bme18I | GGWCC | 3 cut(s) | 435, 770, 906 |
| BmeT110I | CYCGRG | 1 cut(s) | 323 |
| BmgT120I | GGNCC | 4 cut(s) | 435, 522, 770, 906 |
| BmrFI | CCNGG | 2 cut(s) | 777, 1119 |
| BmsI | GCATC | 3 cut(s) | 66, 217, 1463 |
| BpiI | GAAGAC | 1 cut(s) | 930 |
| BpmI | CTGGAG | 2 cut(s) | 353, 759 |
| Bpu10I | CCTNAGC | 1 cut(s) | 111 |
| BpuEI | CTTGAG | 3 cut(s) | 443, 656, 806 |
| BsaJI | CCNNGG | 7 cut(s) | 60, 90, 431, 657, 807, 1117, 1162 |
| BsaWI | WCCGGW | 1 cut(s) | 578 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 122, 444, 599, 782, 903, 1177 |
| Bse1I | ACTGG | 4 cut(s) | 116, 370, 787, 1326 |
| BseBI | CCWGG | 2 cut(s) | 777, 1119 |
| BseDI | CCNNGG | 7 cut(s) | 60, 90, 431, 657, 807, 1117, 1162 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 122, 444, 599, 782, 903, 1177 |
| BseMII | CTCAG | 3 cut(s) | 125, 866, 1410 |
| BseNI | ACTGG | 4 cut(s) | 116, 370, 787, 1326 |
| BseRI | GAGGAG | 1 cut(s) | 724 |
| BseSI | GKGCMC | 1 cut(s) | 251 |
| BseXI | GCAGC | 5 cut(s) | 77, 217, 815, 856, 1488 |
| BsgI | GTGCAG | 1 cut(s) | 1138 |
| BshFI | GGCC | 5 cut(s) | 95, 524, 656, 893, 1181 |
| BsiHKAI | GWGCWC | 4 cut(s) | 251, 369, 459, 672 |
| BsiHKCI | CYCGRG | 1 cut(s) | 323 |
| BsiSI | CCGG | 1 cut(s) | 579 |
| BslFI | GGGAC | 2 cut(s) | 246, 626 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 122, 444, 599, 782, 903, 1177 |
| BsmAI | GTCTC | 1 cut(s) | 641 |
| BsmFI | GGGAC | 2 cut(s) | 246, 626 |
| BsmI | GAATGC | 2 cut(s) | 682, 1367 |
| BsnI | GGCC | 5 cut(s) | 95, 524, 656, 893, 1181 |
| BsoBI | CYCGRG | 1 cut(s) | 323 |
| Bsp1286I | GDGCHC | 4 cut(s) | 251, 369, 459, 672 |
| Bsp1407I | TGTACA | 2 cut(s) | 561, 994 |
| Bsp143I | GATC | 7 cut(s) | 86, 255, 415, 691, 952, 1062, 1386 |
| Bsp19I | CCATGG | 5 cut(s) | 60, 90, 657, 807, 1162 |
| BspACI | CCGC | 4 cut(s) | 12, 145, 897, 1339 |
| BspANI | GGCC | 5 cut(s) | 95, 524, 656, 893, 1181 |
| BspCNI | CTCAG | 3 cut(s) | 124, 867, 1411 |
| BspMAI | CTGCAG | 1 cut(s) | 235 |
| BspPI | GGATC | 4 cut(s) | 81, 263, 410, 1070 |
| BsrGI | TGTACA | 2 cut(s) | 561, 994 |
| BsrI | ACTGG | 4 cut(s) | 116, 370, 787, 1326 |
| BssECI | CCNNGG | 7 cut(s) | 60, 90, 431, 657, 807, 1117, 1162 |
| BssMI | GATC | 7 cut(s) | 86, 255, 415, 691, 952, 1062, 1386 |
| BssSI | CACGAG | 1 cut(s) | 250 |
| BssT1I | CCWWGG | 6 cut(s) | 60, 90, 431, 657, 807, 1162 |
| Bst2BI | CACGAG | 1 cut(s) | 250 |
| Bst2UI | CCWGG | 2 cut(s) | 777, 1119 |
| Bst4CI | ACNGT | 4 cut(s) | 575, 885, 999, 1484 |
| Bst6I | CTCTTC | 2 cut(s) | 1272, 1283 |
| BstAUI | TGTACA | 2 cut(s) | 561, 994 |
| BstC8I | GCNNGC | 2 cut(s) | 849, 891 |
| BstDEI | CTNAG | 3 cut(s) | 111, 875, 1419 |
| BstDSI | CCRYGG | 5 cut(s) | 60, 90, 657, 807, 1162 |
| BstEII | GGTNACC | 1 cut(s) | 581 |
| BstHHI | GCGC | 2 cut(s) | 1116, 1267 |
| BstKTI | GATC | 7 cut(s) | 89, 258, 418, 694, 955, 1065, 1389 |
| BstMAI | GTCTC | 1 cut(s) | 641 |
| BstMBI | GATC | 7 cut(s) | 86, 255, 415, 691, 952, 1062, 1386 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 62, 809, 1122, 1271, 1307, 1336, 1400 |
| BstNI | CCWGG | 2 cut(s) | 777, 1119 |
| BstNSI | RCATGY | 2 cut(s) | 1135, 1147 |
| BstPI | GGTNACC | 1 cut(s) | 581 |
| BstSCI | CCNGG | 2 cut(s) | 775, 1117 |
| BstSFI | CTRYAG | 1 cut(s) | 231 |
| BstSLI | GKGCMC | 1 cut(s) | 251 |
| BstV1I | GCAGC | 5 cut(s) | 77, 217, 815, 856, 1488 |
| BstV2I | GAAGAC | 1 cut(s) | 930 |
| BstX2I | RGATCY | 2 cut(s) | 86, 691 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 664 |
| BstYI | RGATCY | 2 cut(s) | 86, 691 |
| BsuI | GTATCC | 1 cut(s) | 1208 |
| BsuRI | GGCC | 5 cut(s) | 95, 524, 656, 893, 1181 |
| BtgI | CCRYGG | 5 cut(s) | 60, 90, 657, 807, 1162 |
| BtsIMutI | CAGTG | 2 cut(s) | 377, 780 |
| Cac8I | GCNNGC | 2 cut(s) | 849, 891 |
| CaiI | CAGNNNCTG | 1 cut(s) | 782 |
| CfoI | GCGC | 2 cut(s) | 1116, 1267 |
| Cfr13I | GGNCC | 4 cut(s) | 435, 522, 770, 906 |
| CseI | GACGC | 2 cut(s) | 45, 1131 |
| Csp6I | GTAC | 5 cut(s) | 107, 387, 562, 757, 995 |
| CviQI | GTAC | 5 cut(s) | 107, 387, 562, 757, 995 |
| DdeI | CTNAG | 3 cut(s) | 111, 875, 1419 |
| DpnI | GATC | 7 cut(s) | 88, 257, 417, 693, 954, 1064, 1388 |
| DpnII | GATC | 7 cut(s) | 86, 255, 415, 691, 952, 1062, 1386 |
| DraI | TTTAAA | 1 cut(s) | 1335 |
| EaeI | YGGCCR | 3 cut(s) | 93, 654, 891 |
| Eam1104I | CTCTTC | 2 cut(s) | 1272, 1283 |
| EarI | CTCTTC | 2 cut(s) | 1272, 1283 |
| Ecl136II | GAGCTC | 3 cut(s) | 367, 457, 670 |
| Eco130I | CCWWGG | 6 cut(s) | 60, 90, 431, 657, 807, 1162 |
| Eco24I | GRGCYC | 3 cut(s) | 369, 459, 672 |
| Eco47I | GGWCC | 3 cut(s) | 435, 770, 906 |
| Eco53kI | GAGCTC | 3 cut(s) | 367, 457, 670 |
| Eco88I | CYCGRG | 1 cut(s) | 323 |
| Eco91I | GGTNACC | 1 cut(s) | 581 |
| EcoICRI | GAGCTC | 3 cut(s) | 367, 457, 670 |
| EcoO65I | GGTNACC | 1 cut(s) | 581 |
| EcoRII | CCWGG | 2 cut(s) | 775, 1117 |
| EcoT14I | CCWWGG | 6 cut(s) | 60, 90, 431, 657, 807, 1162 |
| EcoT22I | ATGCAT | 2 cut(s) | 1137, 1513 |
| EcoT38I | GRGCYC | 3 cut(s) | 369, 459, 672 |
| ErhI | CCWWGG | 6 cut(s) | 60, 90, 431, 657, 807, 1162 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 434, 466 |
| FaqI | GGGAC | 2 cut(s) | 246, 626 |
| Fnu4HI | GCNGC | 5 cut(s) | 66, 231, 804, 845, 1477 |
| FriOI | GRGCYC | 3 cut(s) | 369, 459, 672 |
| Fsp4HI | GCNGC | 5 cut(s) | 66, 231, 804, 845, 1477 |
| FspBI | CTAG | 3 cut(s) | 104, 182, 1044 |
| FspI | TGCGCA | 1 cut(s) | 1266 |
| GlaI | GCGC | 2 cut(s) | 1115, 1266 |
| GluI | GCNGC | 5 cut(s) | 66, 231, 804, 845, 1477 |
| GsuI | CTGGAG | 2 cut(s) | 353, 759 |
| HaeIII | GGCC | 5 cut(s) | 95, 524, 656, 893, 1181 |
| HapII | CCGG | 1 cut(s) | 579 |
| HgaI | GACGC | 2 cut(s) | 45, 1131 |
| HhaI | GCGC | 2 cut(s) | 1116, 1267 |
| Hin6I | GCGC | 2 cut(s) | 1114, 1265 |
| HinP1I | GCGC | 2 cut(s) | 1114, 1265 |
| HincII | GTYRAC | 1 cut(s) | 1002 |
| HindII | GTYRAC | 1 cut(s) | 1002 |
| HindIII | AAGCTT | 2 cut(s) | 793, 1328 |
| HinfI | GANTC | 6 cut(s) | 194, 392, 614, 649, 866, 1258 |
| HpaI | GTTAAC | 1 cut(s) | 1002 |
| HpaII | CCGG | 1 cut(s) | 579 |
| HphI | GGTGA | 3 cut(s) | 344, 575, 1267 |
| Hpy166II | GTNNAC | 4 cut(s) | 241, 249, 564, 1002 |
| Hpy188I | TCNGA | 3 cut(s) | 439, 871, 1391 |
| Hpy188III | TCNNGA | 6 cut(s) | 325, 396, 673, 863, 1011, 1201 |
| Hpy8I | GTNNAC | 4 cut(s) | 241, 249, 564, 1002 |
| HpyAV | CCTTC | 8 cut(s) | 36, 42, 350, 645, 709, 1226, 1310, 1346 |
| HpyCH4III | ACNGT | 4 cut(s) | 575, 885, 999, 1484 |
| HpyCH4V | TGCA | 9 cut(s) | 233, 249, 803, 844, 1135, 1155, 1310, 1476, 1511 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 62, 809, 1122, 1271, 1307, 1336, 1400 |
| HpyF3I | CTNAG | 3 cut(s) | 111, 875, 1419 |
| HspAI | GCGC | 2 cut(s) | 1114, 1265 |
| KspAI | GTTAAC | 1 cut(s) | 1002 |
| Kzo9I | GATC | 7 cut(s) | 86, 255, 415, 691, 952, 1062, 1386 |
| LmnI | GCTCC | 4 cut(s) | 372, 667, 1391, 1400 |
| Lsp1109I | GCAGC | 5 cut(s) | 77, 217, 815, 856, 1488 |
| LweI | GCATC | 3 cut(s) | 66, 217, 1463 |
| MaeI | CTAG | 3 cut(s) | 104, 182, 1044 |
| MaeIII | GTNAC | 2 cut(s) | 581, 1255 |
| MalI | GATC | 7 cut(s) | 88, 257, 417, 693, 954, 1064, 1388 |
| MboI | GATC | 7 cut(s) | 86, 255, 415, 691, 952, 1062, 1386 |
| MflI | RGATCY | 2 cut(s) | 86, 691 |
| MhlI | GDGCHC | 4 cut(s) | 251, 369, 459, 672 |
| MlsI | TGGCCA | 3 cut(s) | 95, 656, 893 |
| MluCI | AATT | 2 cut(s) | 315, 1305 |
| MluNI | TGGCCA | 3 cut(s) | 95, 656, 893 |
| MlyI | GAGTC | 4 cut(s) | 401, 608, 643, 1252 |
| MmeI | TCCRAC | 1 cut(s) | 1195 |
| Mox20I | TGGCCA | 3 cut(s) | 95, 656, 893 |
| Mph1103I | ATGCAT | 2 cut(s) | 1137, 1513 |
| MroXI | GAANNNNTTC | 1 cut(s) | 719 |
| MscI | TGGCCA | 3 cut(s) | 95, 656, 893 |
| MseI | TTAA | 5 cut(s) | 311, 569, 696, 1001, 1334 |
| MslI | CAYNNNNRTG | 3 cut(s) | 914, 969, 1130 |
| Msp20I | TGGCCA | 3 cut(s) | 95, 656, 893 |
| MspI | CCGG | 1 cut(s) | 579 |
| MspR9I | CCNGG | 2 cut(s) | 777, 1119 |
| Mva1269I | GAATGC | 2 cut(s) | 682, 1367 |
| MvaI | CCWGG | 2 cut(s) | 777, 1119 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 62, 809, 1122, 1271, 1307, 1336, 1400 |
| NcoI | CCATGG | 5 cut(s) | 60, 90, 657, 807, 1162 |
| NdeII | GATC | 7 cut(s) | 86, 255, 415, 691, 952, 1062, 1386 |
| NmuCI | GTSAC | 2 cut(s) | 581, 1255 |
| NsbI | TGCGCA | 1 cut(s) | 1266 |
| NsiI | ATGCAT | 2 cut(s) | 1137, 1513 |
| NspI | RCATGY | 2 cut(s) | 1135, 1147 |
| PaeR7I | CTCGAG | 1 cut(s) | 323 |
| PciI | ACATGT | 1 cut(s) | 1143 |
| PctI | GAATGC | 2 cut(s) | 682, 1367 |
| PdmI | GAANNNNTTC | 1 cut(s) | 719 |
| PfeI | GAWTC | 2 cut(s) | 194, 866 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 782, 1177 |
| PkrI | GCNGC | 5 cut(s) | 67, 232, 805, 846, 1478 |
| PleI | GAGTC | 4 cut(s) | 400, 608, 643, 1252 |
| PpsI | GAGTC | 4 cut(s) | 400, 608, 643, 1252 |
| PscI | ACATGT | 1 cut(s) | 1143 |
| Psp124BI | GAGCTC | 3 cut(s) | 369, 459, 672 |
| Psp6I | CCWGG | 2 cut(s) | 775, 1117 |
| PspEI | GGTNACC | 1 cut(s) | 581 |
| PspGI | CCWGG | 2 cut(s) | 775, 1117 |
| PspPI | GGNCC | 4 cut(s) | 435, 522, 770, 906 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1196, 1228 |
| PstI | CTGCAG | 1 cut(s) | 235 |
| PstNI | CAGNNNCTG | 1 cut(s) | 782 |
| PsuI | RGATCY | 2 cut(s) | 86, 691 |
| RsaI | GTAC | 5 cut(s) | 108, 388, 563, 758, 996 |
| RsaNI | GTAC | 5 cut(s) | 107, 387, 562, 757, 995 |
| RseI | CAYNNNNRTG | 3 cut(s) | 914, 969, 1130 |
| SacI | GAGCTC | 3 cut(s) | 369, 459, 672 |
| SaqAI | TTAA | 5 cut(s) | 311, 569, 696, 1001, 1334 |
| SatI | GCNGC | 5 cut(s) | 66, 231, 804, 845, 1477 |
| Sau3AI | GATC | 7 cut(s) | 86, 255, 415, 691, 952, 1062, 1386 |
| Sau96I | GGNCC | 4 cut(s) | 435, 522, 770, 906 |
| SchI | GAGTC | 4 cut(s) | 401, 608, 643, 1252 |
| ScrFI | CCNGG | 2 cut(s) | 777, 1119 |
| SduI | GDGCHC | 4 cut(s) | 251, 369, 459, 672 |
| SfaNI | GCATC | 3 cut(s) | 66, 217, 1463 |
| SfcI | CTRYAG | 1 cut(s) | 231 |
| Sfr274I | CTCGAG | 1 cut(s) | 323 |
| SinI | GGWCC | 3 cut(s) | 435, 770, 906 |
| SlaI | CTCGAG | 1 cut(s) | 323 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 914, 969, 1130 |
| SmlI | CTYRAG | 4 cut(s) | 323, 458, 671, 821 |
| SmoI | CTYRAG | 4 cut(s) | 323, 458, 671, 821 |
| SpeI | ACTAGT | 1 cut(s) | 181 |
| Sse9I | AATT | 2 cut(s) | 315, 1305 |
| SsiI | CCGC | 4 cut(s) | 12, 145, 897, 1339 |
| SspI | AATATT | 1 cut(s) | 1071 |
| SspMI | CTAG | 3 cut(s) | 104, 182, 1044 |
| SstI | GAGCTC | 3 cut(s) | 369, 459, 672 |
| StyD4I | CCNGG | 2 cut(s) | 775, 1117 |
| StyI | CCWWGG | 6 cut(s) | 60, 90, 431, 657, 807, 1162 |
| TaaI | ACNGT | 4 cut(s) | 575, 885, 999, 1484 |
| TaqI | TCGA | 7 cut(s) | 189, 197, 324, 627, 961, 1218, 1230 |
| TaqII | GACCGA | 1 cut(s) | 894 |
| TasI | AATT | 2 cut(s) | 315, 1305 |
| TatI | WGTACW | 2 cut(s) | 561, 994 |
| TfiI | GAWTC | 2 cut(s) | 194, 866 |
| Tru1I | TTAA | 5 cut(s) | 311, 569, 696, 1001, 1334 |
| Tru9I | TTAA | 5 cut(s) | 311, 569, 696, 1001, 1334 |
| TscAI | CASTG | 2 cut(s) | 377, 787 |
| TseFI | GTSAC | 2 cut(s) | 581, 1255 |
| TseI | GCWGC | 5 cut(s) | 65, 230, 803, 844, 1476 |
| Tsp45I | GTSAC | 2 cut(s) | 581, 1255 |
| TspDTI | ATGAA | 7 cut(s) | 24, 369, 555, 1015, 1239, 1301, 1374 |
| TspRI | CASTG | 2 cut(s) | 377, 787 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 782, 1177 |
| VneI | GTGCAC | 1 cut(s) | 247 |
| VpaK11BI | GGWCC | 3 cut(s) | 435, 770, 906 |
| XceI | RCATGY | 2 cut(s) | 1135, 1147 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 596 |
| XhoI | CTCGAG | 1 cut(s) | 323 |
| XmnI | GAANNNNTTC | 1 cut(s) | 719 |
| XspI | CTAG | 3 cut(s) | 104, 182, 1044 |
| Zsp2I | ATGCAT | 2 cut(s) | 1137, 1513 |