MD15G1254600.v1.1

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
21507550 .. 21509969
2420 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1254600.v1.1.491

Sequence Viewer

Length: 1419 bp
ATGAACATGTTCTCCTCCAAAGAAATGCCCTCTCCGTCGTCGTTGTTCTCTGCCTACGCCTCCATGGCGGCCTCGATGATGCTATTTCGGTCCATGGCCAACGAGCTCATTCCTCATCCGGTTAGGGGCTACCTTTTATCTACCATCAGATACATTTTCAAGACTCATTCCCCTCAACTCACCCTAGTCATAGAGGAATCAAATGGAATATCGCGCAACCAAGTCTACGAAGCTGCAGAGATTTATTTGTGCACAAAGATCAGCTCCAACACCGAAAGGATCAGAGTTAGCAAGAGCCCCAAGGGGAAGAACTTGACAATCCGACTCGAGAAAGGCGAGAAGTTGGTCGATTTCTATGAAGGGATTCAACTCAAATGGCGGTTTGTTTGTGCAGAGTCACAACAGAACAACCGTAATGATCCATTTTCTCCTCCGAGGTCCGAAAAGCGCTACTTTGAGCTAACATTCCACAAGCAGCACAGAGAGAAAGTTTTGGATTGTTATGTGCCTTATATTCTTGAAAGGGCCAATGAAATGAAAGATGAAGAAAGGGTTTTGAAGATGTACACATTGAATTCAAACCCTTACGATGGCATCAAATGGGAACCCATCAATCTCGAACACCCTGCAACGTTTGAGACTCTGGCCATGGACCAAGAGCTCAAGAATGCAGTTATCGATGATCTTAACAGGTTTGTCAGGAGGAAGGAGTTCTACAAGAAAGTAGGAAGGGCGTGGAAACGAGGGTACTTGCTGTATGGTCCTCCGGGCACTGGAAAATCGAGCTTGGTCGCAGCCATGGCTAATTATCTCAAGTTTGATGTCTACGACTTGCAGCTTACTAACATATTTCGTGAGTCAGACCTGAGAAACCTGCTGCTGGGCACCGCGAACAGGTCAATTCTTGTGATTGAAGACATTGATTGTAGCGTGGATTTTCCCGATCGTCAACATACAGATGGAAGAAAGCAGCATCAAGTACAGTTAACACTGTCTGGACTACTAAACTTCATAGATGGCTTATGGTCTAGCTGTGGAGACGAGAGGATCATAATTTTTACCACTAACCACAAAGAAAGGCTAGACCCTGCGCTTTTACGCCCGGGCCGCATGGACATGCACATTCATATGTCCTACTGCACATACCACGGATTCAAACTCTTGGCCTCGAACTACTTAGGCATCTATAACCACCACCACCTCTACGGAGAAATCGAAGACCTACTCAAGGAAACGGAGGTAACTCCAGCGCACGTTGCAGAAGAGCTGATGAAGAACGAAGATGTTGATACTGCACTCGAAGGGCTTGTCAAGCTTTTAAAGAGGAAGAAATTGGAAGGCGATGAATGTGAGGCAGAGGCTGAGAAGAAGACTGCAGCAAAGAGGCAGAAATTGGGAAGCAACACAAGAAATCTGTGA

Protein Analysis

473

Amino Acids

54.61

Weight (kDa)

8.02

Isoelectric Point (pI)

46.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 37 - 130 1.1e-25 Domain associated at C-terminal with AAA
AAA PF00004 250 - 378 5.6e-21 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 380 - 446 1.2e-23 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014905)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17760 AT5G17760
fragaria_vesca FvH4_1g12741
malus_domestica MD02G1141700.v1.1 MD15G1254600.v1.1
prunus_persica Prupe.7G159000_v2.0.a1
pyrus_communis pycom02g11170 pycom15g22370
rosa_chinensis RchiOBHm_Chr2g0100821
rosa_laevigata RLG00000017014
rosa_multiflora Rmu_sc0001659.1_g000021
rosa_roxburghii Rroxscaffold_2G00141830
rosa_rugosa Rorug02G0093100
rosa_samantha Rh2CG146700 Rh2DG146100
rosa_wichuraiana Rw2G011010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 882
AccB1I GGYRCC 1 cut(s) 884
AccI GTMKAC 2 cut(s) 225, 825
AccII CGCG 2 cut(s) 214, 890
AciI CCGC 4 cut(s) 68, 379, 888, 1108
AclI AACGTT 1 cut(s) 632
AclWI GGATC 3 cut(s) 287, 413, 1055
AcoI YGGCCR 2 cut(s) 96, 645
AcsI RAATTY 1 cut(s) 574
AfaI GTAC 3 cut(s) 566, 749, 981
AfeI AGCGCT 1 cut(s) 449
AfiI CCNNNNNNNGG 6 cut(s) 125, 590, 773, 880, 894, 1228
AflIII ACRYGT 1 cut(s) 6
AgsI TTSAA 8 cut(s) 160, 368, 521, 559, 574, 579, 914, 1156
AloI GAACNNNNNNTCC 1 cut(s) 28
Alw21I GWGCWC 3 cut(s) 108, 254, 663
Alw26I GTCTC 2 cut(s) 632, 1032
Alw44I GTGCAC 1 cut(s) 250
AlwI GGATC 3 cut(s) 287, 413, 1055
AlwNI CAGNNNCTG 1 cut(s) 1361
Ama87I CYCGRG 2 cut(s) 326, 1102
Aor51HI AGCGCT 1 cut(s) 449
AoxI GGCC 6 cut(s) 69, 96, 525, 645, 1105, 1164
ApaLI GTGCAC 1 cut(s) 250
ApeKI GCWGC 7 cut(s) 233, 475, 794, 835, 877, 970, 1376
ApoI RAATTY 1 cut(s) 574
ArsI GACNNNNNNTTYG 2 cut(s) 1293, 1325
Asp700I GAANNNNTTC 3 cut(s) 8, 363, 710
AspLEI GCGC 4 cut(s) 216, 450, 1093, 1252
AspS9I GGNCC 6 cut(s) 90, 438, 525, 652, 761, 1105
AsuC2I CCSGG 3 cut(s) 768, 1103, 1104
AsuHPI GGTGA 1 cut(s) 172
AvaI CYCGRG 2 cut(s) 326, 1102
AvaII GGWCC 4 cut(s) 90, 438, 652, 761
BaeGI GKGCMC 3 cut(s) 254, 773, 887
BalI TGGCCA 2 cut(s) 98, 647
BanI GGYRCC 1 cut(s) 884
BanII GRGCYC 3 cut(s) 108, 299, 663
BarI GAAGNNNNNNTAC 2 cut(s) 698, 730
BbsI GAAGAC 3 cut(s) 921, 1224, 1376
Bbv12I GWGCWC 3 cut(s) 108, 254, 663
BbvI GCAGC 7 cut(s) 220, 487, 806, 847, 864, 982, 1388
BccI CCATC 5 cut(s) 152, 584, 617, 953, 1010
BcgI CGANNNNNNTGC 2 cut(s) 608, 642
BcnI CCSGG 3 cut(s) 768, 1103, 1104
BcoDI GTCTC 2 cut(s) 632, 1032
BfaI CTAG 3 cut(s) 185, 1029, 1082
BfmI CTRYAG 2 cut(s) 234, 1374
BfoI RGCGCY 1 cut(s) 451
BfuAI ACCTGC 1 cut(s) 882
BglI GCCNNNNNGGC 1 cut(s) 65
BisI GCNGC 9 cut(s) 69, 234, 476, 795, 836, 878, 971, 1108, 1377
BlsI GCNGC 9 cut(s) 70, 235, 477, 796, 837, 879, 972, 1109, 1378
Bme1390I CCNGG 3 cut(s) 768, 1103, 1104
Bme18I GGWCC 4 cut(s) 90, 438, 652, 761
BmeT110I CYCGRG 2 cut(s) 326, 1102
BmgT120I GGNCC 6 cut(s) 90, 438, 525, 652, 761, 1105
BmiI GGNNCC 2 cut(s) 606, 886
BmrFI CCNGG 3 cut(s) 768, 1103, 1104
BmsI GCATC 4 cut(s) 69, 603, 982, 1191
BpiI GAAGAC 3 cut(s) 921, 1224, 1376
BpmI CTGGAG 1 cut(s) 1230
BpuEI CTTGAG 3 cut(s) 647, 797, 1211
BpuMI CCSGG 3 cut(s) 768, 1103, 1104
Bsa29I ATCGAT 1 cut(s) 678
BsaJI CCNNGG 8 cut(s) 63, 93, 300, 434, 648, 798, 1102, 1147
BsaWI WCCGGW 1 cut(s) 118
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 6 cut(s) 125, 590, 773, 880, 894, 1228
Bse1I ACTGG 1 cut(s) 778
BseCI ATCGAT 1 cut(s) 678
BseDI CCNNGG 8 cut(s) 63, 93, 300, 434, 648, 798, 1102, 1147
BseGI GGATG 1 cut(s) 115
BseLI CCNNNNNNNGG 6 cut(s) 125, 590, 773, 880, 894, 1228
BseMII CTCAG 2 cut(s) 857, 1353
BseNI ACTGG 1 cut(s) 778
BseRI GAGGAG 2 cut(s) 4, 420
BseSI GKGCMC 3 cut(s) 254, 773, 887
BseXI GCAGC 7 cut(s) 220, 487, 806, 847, 864, 982, 1388
BseYI CCCAGC 1 cut(s) 880
BsgI GTGCAG 3 cut(s) 411, 1123, 1278
Bsh1236I CGCG 2 cut(s) 214, 890
Bsh1285I CGRYCG 1 cut(s) 946
BshFI GGCC 6 cut(s) 71, 98, 527, 647, 1107, 1166
BshNI GGYRCC 1 cut(s) 884
BshVI ATCGAT 1 cut(s) 678
BsiEI CGRYCG 1 cut(s) 946
BsiHKAI GWGCWC 3 cut(s) 108, 254, 663
BsiHKCI CYCGRG 2 cut(s) 326, 1102
BsiSI CCGG 3 cut(s) 119, 767, 1103
BslI CCNNNNNNNGG 6 cut(s) 125, 590, 773, 880, 894, 1228
BsmAI GTCTC 2 cut(s) 632, 1032
BsmBI CGTCTC 1 cut(s) 1032
BsmI GAATGC 1 cut(s) 673
BsnI GGCC 6 cut(s) 71, 98, 527, 647, 1107, 1166
BsoBI CYCGRG 2 cut(s) 326, 1102
Bsp1286I GDGCHC 6 cut(s) 108, 254, 299, 663, 773, 887
Bsp1407I TGTACA 1 cut(s) 564
Bsp143I GATC 6 cut(s) 258, 279, 418, 682, 943, 1047
Bsp19I CCATGG 4 cut(s) 63, 93, 648, 798
BspACI CCGC 4 cut(s) 68, 379, 888, 1108
BspANI GGCC 6 cut(s) 71, 98, 527, 647, 1107, 1166
BspCNI CTCAG 2 cut(s) 858, 1354
BspDI ATCGAT 1 cut(s) 678
BspFNI CGCG 2 cut(s) 214, 890
BspLI GGNNCC 2 cut(s) 606, 886
BspMAI CTGCAG 2 cut(s) 238, 1378
BspMI ACCTGC 1 cut(s) 882
BspPI GGATC 3 cut(s) 287, 413, 1055
BspQI GCTCTTC 1 cut(s) 1257
BspT107I GGYRCC 1 cut(s) 884
BsrGI TGTACA 1 cut(s) 564
BsrI ACTGG 1 cut(s) 778
BssECI CCNNGG 8 cut(s) 63, 93, 300, 434, 648, 798, 1102, 1147
BssMI GATC 6 cut(s) 258, 279, 418, 682, 943, 1047
BssT1I CCWWGG 5 cut(s) 63, 93, 300, 648, 798
Bst4CI ACNGT 3 cut(s) 413, 984, 993
Bst6I CTCTTC 1 cut(s) 1257
BstAUI TGTACA 1 cut(s) 564
BstDEI CTNAG 3 cut(s) 866, 1177, 1362
BstDSI CCRYGG 5 cut(s) 63, 93, 648, 798, 1147
BstENI CCTNNNNNAGG 1 cut(s) 1226
BstF5I GGATG 1 cut(s) 115
BstFNI CGCG 2 cut(s) 214, 890
BstH2I RGCGCY 1 cut(s) 451
BstHHI GCGC 4 cut(s) 216, 450, 1093, 1252
BstKTI GATC 6 cut(s) 261, 282, 421, 685, 946, 1050
BstMAI GTCTC 2 cut(s) 632, 1032
BstMBI GATC 6 cut(s) 258, 279, 418, 682, 943, 1047
BstMCI CGRYCG 1 cut(s) 946
BstMWI GCNNNNNNNGC 5 cut(s) 65, 800, 1107, 1256, 1312
BstNSI RCATGY 2 cut(s) 10, 1120
BstSCI CCNGG 3 cut(s) 766, 1101, 1102
BstSFI CTRYAG 2 cut(s) 234, 1374
BstSLI GKGCMC 3 cut(s) 254, 773, 887
BstUI CGCG 2 cut(s) 214, 890
BstV1I GCAGC 7 cut(s) 220, 487, 806, 847, 864, 982, 1388
BstV2I GAAGAC 3 cut(s) 921, 1224, 1376
Bsu15I ATCGAT 1 cut(s) 678
BsuRI GGCC 6 cut(s) 71, 98, 527, 647, 1107, 1166
BsuTUI ATCGAT 1 cut(s) 678
BtgI CCRYGG 5 cut(s) 63, 93, 648, 798, 1147
BtgZI GCGATG 1 cut(s) 1356
BtsCI GGATG 1 cut(s) 115
BtsIMutI CAGTG 2 cut(s) 771, 989
BveI ACCTGC 1 cut(s) 882
CaiI CAGNNNCTG 1 cut(s) 1361
CfoI GCGC 4 cut(s) 216, 450, 1093, 1252
Cfr13I GGNCC 6 cut(s) 90, 438, 525, 652, 761, 1105
Cfr9I CCCGGG 1 cut(s) 1102
ClaI ATCGAT 1 cut(s) 678
Csp6I GTAC 3 cut(s) 565, 748, 980
CviAII CATG 7 cut(s) 7, 64, 94, 649, 799, 1111, 1117
CviQI GTAC 3 cut(s) 565, 748, 980
DdeI CTNAG 3 cut(s) 866, 1177, 1362
DpnI GATC 6 cut(s) 260, 281, 420, 684, 945, 1049
DpnII GATC 6 cut(s) 258, 279, 418, 682, 943, 1047
DraI TTTAAA 1 cut(s) 1320
EaeI YGGCCR 2 cut(s) 96, 645
Eam1104I CTCTTC 1 cut(s) 1257
EarI CTCTTC 1 cut(s) 1257
Ecl136II GAGCTC 2 cut(s) 106, 661
Eco130I CCWWGG 5 cut(s) 63, 93, 300, 648, 798
Eco24I GRGCYC 3 cut(s) 108, 299, 663
Eco47I GGWCC 4 cut(s) 90, 438, 652, 761
Eco47III AGCGCT 1 cut(s) 449
Eco53kI GAGCTC 2 cut(s) 106, 661
Eco88I CYCGRG 2 cut(s) 326, 1102
EcoICRI GAGCTC 2 cut(s) 106, 661
EcoNI CCTNNNNNAGG 1 cut(s) 1226
EcoRI GAATTC 1 cut(s) 574
EcoT14I CCWWGG 5 cut(s) 63, 93, 300, 648, 798
EcoT38I GRGCYC 3 cut(s) 108, 299, 663
ErhI CCWWGG 5 cut(s) 63, 93, 300, 648, 798
Esp3I CGTCTC 1 cut(s) 1032
FaeI CATG 7 cut(s) 10, 67, 97, 652, 802, 1114, 1120
FalI AAGNNNNNCTT 2 cut(s) 437, 469
FatI CATG 7 cut(s) 6, 63, 93, 648, 798, 1110, 1116
FauNDI CATATG 1 cut(s) 1128
FblI GTMKAC 2 cut(s) 225, 825
Fnu4HI GCNGC 9 cut(s) 69, 234, 476, 795, 836, 878, 971, 1108, 1377
FokI GGATG 1 cut(s) 102
FriOI GRGCYC 3 cut(s) 108, 299, 663
Fsp4HI GCNGC 9 cut(s) 69, 234, 476, 795, 836, 878, 971, 1108, 1377
FspBI CTAG 3 cut(s) 185, 1029, 1082
GlaI GCGC 4 cut(s) 215, 449, 1092, 1251
GluI GCNGC 9 cut(s) 69, 234, 476, 795, 836, 878, 971, 1108, 1377
GsaI CCCAGC 1 cut(s) 884
GsuI CTGGAG 1 cut(s) 1230
HaeII RGCGCY 1 cut(s) 451
HaeIII GGCC 6 cut(s) 71, 98, 527, 647, 1107, 1166
HapII CCGG 3 cut(s) 119, 767, 1103
HhaI GCGC 4 cut(s) 216, 450, 1093, 1252
Hin1II CATG 7 cut(s) 10, 67, 97, 652, 802, 1114, 1120
Hin6I GCGC 4 cut(s) 214, 448, 1091, 1250
HinP1I GCGC 4 cut(s) 214, 448, 1091, 1250
HincII GTYRAC 2 cut(s) 950, 987
HindII GTYRAC 2 cut(s) 950, 987
HindIII AAGCTT 1 cut(s) 1313
HinfI GANTC 8 cut(s) 163, 197, 324, 364, 395, 640, 857, 1152
HpaI GTTAAC 1 cut(s) 987
HpaII CCGG 3 cut(s) 119, 767, 1103
HphI GGTGA 1 cut(s) 172
Hpy166II GTNNAC 6 cut(s) 226, 252, 567, 826, 950, 987
Hpy188I TCNGA 6 cut(s) 149, 284, 323, 435, 442, 862
Hpy188III TCNNGA 9 cut(s) 160, 328, 518, 617, 664, 700, 854, 941, 996
Hpy8I GTNNAC 6 cut(s) 226, 252, 567, 826, 950, 987
Hpy99I CGWCG 2 cut(s) 40, 43
HpyAV CCTTC 5 cut(s) 353, 700, 723, 1295, 1331
HpyCH4III ACNGT 3 cut(s) 413, 984, 993
HpyCH4IV ACGT 2 cut(s) 632, 1254
HpyF10VI GCNNNNNNNGC 5 cut(s) 65, 800, 1107, 1256, 1312
HpyF3I CTNAG 3 cut(s) 866, 1177, 1362
HpySE526I ACGT 2 cut(s) 632, 1254
Hsp92II CATG 7 cut(s) 10, 67, 97, 652, 802, 1114, 1120
HspAI GCGC 4 cut(s) 214, 448, 1091, 1250
KspAI GTTAAC 1 cut(s) 987
Kzo9I GATC 6 cut(s) 258, 279, 418, 682, 943, 1047
LguI GCTCTTC 1 cut(s) 1257
LmnI GCTCC 1 cut(s) 269
Lsp1109I GCAGC 7 cut(s) 220, 487, 806, 847, 864, 982, 1388
LweI GCATC 4 cut(s) 69, 603, 982, 1191
MaeI CTAG 3 cut(s) 185, 1029, 1082
MaeII ACGT 2 cut(s) 632, 1254
MaeIII GTNAC 2 cut(s) 396, 1240
MalI GATC 6 cut(s) 260, 281, 420, 684, 945, 1049
MboI GATC 6 cut(s) 258, 279, 418, 682, 943, 1047
MhlI GDGCHC 6 cut(s) 108, 254, 299, 663, 773, 887
MlsI TGGCCA 2 cut(s) 98, 647
MluCI AATT 6 cut(s) 574, 805, 900, 1053, 1331, 1391
MluNI TGGCCA 2 cut(s) 98, 647
MlyI GAGTC 5 cut(s) 157, 318, 404, 634, 866
MmeI TCCRAC 2 cut(s) 291, 346
Mox20I TGGCCA 2 cut(s) 98, 647
MroXI GAANNNNTTC 3 cut(s) 8, 363, 710
MscI TGGCCA 2 cut(s) 98, 647
MseI TTAA 3 cut(s) 687, 986, 1319
MslI CAYNNNNRTG 3 cut(s) 957, 1115, 1127
Msp20I TGGCCA 2 cut(s) 98, 647
MspI CCGG 3 cut(s) 119, 767, 1103
MspR9I CCNGG 3 cut(s) 768, 1103, 1104
Mva1269I GAATGC 1 cut(s) 673
MvnI CGCG 2 cut(s) 214, 890
MwoI GCNNNNNNNGC 5 cut(s) 65, 800, 1107, 1256, 1312
NciI CCSGG 3 cut(s) 768, 1103, 1104
NcoI CCATGG 4 cut(s) 63, 93, 648, 798
NdeI CATATG 1 cut(s) 1128
NdeII GATC 6 cut(s) 258, 279, 418, 682, 943, 1047
NlaIII CATG 7 cut(s) 10, 67, 97, 652, 802, 1114, 1120
NlaIV GGNNCC 2 cut(s) 606, 886
NmuCI GTSAC 1 cut(s) 396
NspI RCATGY 2 cut(s) 10, 1120
PaeR7I CTCGAG 1 cut(s) 326
PciI ACATGT 1 cut(s) 6
PciSI GCTCTTC 1 cut(s) 1257
PcsI WCGNNNNNNNCGW 2 cut(s) 333, 1212
PctI GAATGC 1 cut(s) 673
PdmI GAANNNNTTC 3 cut(s) 8, 363, 710
PfeI GAWTC 3 cut(s) 197, 364, 1152
PkrI GCNGC 9 cut(s) 70, 235, 477, 796, 837, 879, 972, 1109, 1378
Ple19I CGATCG 1 cut(s) 946
PleI GAGTC 5 cut(s) 157, 318, 403, 634, 865
PpsI GAGTC 5 cut(s) 157, 318, 403, 634, 865
PscI ACATGT 1 cut(s) 6
Psp124BI GAGCTC 2 cut(s) 108, 663
Psp1406I AACGTT 1 cut(s) 632
PspFI CCCAGC 1 cut(s) 880
PspN4I GGNNCC 2 cut(s) 606, 886
PspPI GGNCC 6 cut(s) 90, 438, 525, 652, 761, 1105
PstI CTGCAG 2 cut(s) 238, 1378
PstNI CAGNNNCTG 1 cut(s) 1361
PvuI CGATCG 1 cut(s) 946
RsaI GTAC 3 cut(s) 566, 749, 981
RsaNI GTAC 3 cut(s) 565, 748, 980
RseI CAYNNNNRTG 3 cut(s) 957, 1115, 1127
SacI GAGCTC 2 cut(s) 108, 663
SapI GCTCTTC 1 cut(s) 1257
SaqAI TTAA 3 cut(s) 687, 986, 1319
SatI GCNGC 9 cut(s) 69, 234, 476, 795, 836, 878, 971, 1108, 1377
Sau3AI GATC 6 cut(s) 258, 279, 418, 682, 943, 1047
Sau96I GGNCC 6 cut(s) 90, 438, 525, 652, 761, 1105
SchI GAGTC 5 cut(s) 157, 318, 404, 634, 866
ScrFI CCNGG 3 cut(s) 768, 1103, 1104
SduI GDGCHC 6 cut(s) 108, 254, 299, 663, 773, 887
SfaNI GCATC 4 cut(s) 69, 603, 982, 1191
SfcI CTRYAG 2 cut(s) 234, 1374
Sfr274I CTCGAG 1 cut(s) 326
SinI GGWCC 4 cut(s) 90, 438, 652, 761
SlaI CTCGAG 1 cut(s) 326
SmaI CCCGGG 1 cut(s) 1104
SmiMI CAYNNNNRTG 3 cut(s) 957, 1115, 1127
SmlI CTYRAG 4 cut(s) 326, 662, 812, 1226
SmoI CTYRAG 4 cut(s) 326, 662, 812, 1226
SrfI GCCCGGGC 1 cut(s) 1104
Sse9I AATT 6 cut(s) 574, 805, 900, 1053, 1331, 1391
SsiI CCGC 4 cut(s) 68, 379, 888, 1108
SspMI CTAG 3 cut(s) 185, 1029, 1082
SstI GAGCTC 2 cut(s) 108, 663
StyD4I CCNGG 3 cut(s) 766, 1101, 1102
StyI CCWWGG 5 cut(s) 63, 93, 300, 648, 798
TaaI ACNGT 3 cut(s) 413, 984, 993
TaiI ACGT 2 cut(s) 635, 1257
TaqI TCGA 9 cut(s) 74, 327, 348, 618, 678, 782, 1169, 1215, 1299
TaqII GACCGA 1 cut(s) 78
TasI AATT 6 cut(s) 574, 805, 900, 1053, 1331, 1391
TatI WGTACW 2 cut(s) 564, 979
TauI GCSGC 2 cut(s) 71, 1110
TfiI GAWTC 3 cut(s) 197, 364, 1152
Tru1I TTAA 3 cut(s) 687, 986, 1319
Tru9I TTAA 3 cut(s) 687, 986, 1319
TscAI CASTG 2 cut(s) 778, 996
TseFI GTSAC 1 cut(s) 396
TseI GCWGC 7 cut(s) 233, 475, 794, 835, 877, 970, 1376
Tsp45I GTSAC 1 cut(s) 396
TspDTI ATGAA 9 cut(s) 17, 372, 546, 551, 558, 1000, 1115, 1286, 1359
TspGWI ACGGA 4 cut(s) 24, 1164, 1221, 1250
TspMI CCCGGG 1 cut(s) 1102
TspRI CASTG 2 cut(s) 778, 996
VneI GTGCAC 1 cut(s) 250
VpaK11BI GGWCC 4 cut(s) 90, 438, 652, 761
XagI CCTNNNNNAGG 1 cut(s) 1226
XapI RAATTY 1 cut(s) 574
XceI RCATGY 2 cut(s) 10, 1120
XhoI CTCGAG 1 cut(s) 326
XmaI CCCGGG 1 cut(s) 1102
XmiI GTMKAC 2 cut(s) 225, 825
XmnI GAANNNNTTC 3 cut(s) 8, 363, 710
XspI CTAG 3 cut(s) 185, 1029, 1082
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.