Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0011637

Physical Location & Seq

Genomic Coordinates Reverse (-)

12333312 .. 12336700

Gene Structure 3389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1149900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGTCTTCTGACAGTGAGCCGTCCCCGGACTCTTCATCTTCTTCACCACCTACGCCGGACTCGTCCAAGTCATCTCCATCTGGTCCATCTCCAAAGGAATCCCCAGAGGACTCATCTTCGGCGCCACCACCATCCTCGACGCCGGCATCATCACCACCACCGTCCTCGCCGCCTCCATCATCATCTCCGCCTCCAAAGGACTCGTCTTCATCATCATCGCCGCCTCCCAAGGACTCGTCTTCATCATCATCGCCACCTCCTAAGGACTCGTCTTCATCATCATCGCCACATCCACCCAAGCAGGGGTCCCAGTCTCCACCTGCACCAAAAGAGGCGACCCCATCTCCACCTCATGCTAAGGAATCACCGGGAAAGGCAACGCCGGCACAACAGACACCAGCGGCAGATGCTGAAGATGAGACTTTGAGTGCGCCTCCTCCTCCAGGGCGTTCTCGGACTTCTCCCTCTGGTGCACTCACGCCACCACGTGCTAGTAGTTCCTCATCAAAAAGTAGTTCTGATGATGACGACACATCATCATCTTCAAATAAAGGCAGGGCGGCGGGAGTTGCAATTGGGGCAGCTGTAATTATAATTGTCCTGCTCGTCGTTTGTGTGGTTTGCATCAGGAAGAGGAGGAGAAAGCGCCGCGATATGCAGTACTATGGAGATGCTCCTAAAGCTGGTGGTGGCTATTACAACACACAACAACAAAGTTGGCACGATATGAATAATCCACAAGGAGACCATGTGATGAGGCTAAACAACCAACCACCTGGTGGTGGTGGTGGTGCTTGGTCTTCAACACCTCCTCAAATGCCGATGAGCGGTGAAGTGAGCACCAATTACTCAGCACCCCCATTGCCACCTCCCTCACCATCAATGGCACTTGGTTTCAACAAGAGCACCTTCACATATGATGAGCTAGCAGCCGCTACTAATGGGTTTGATCAGGCCAATTTGTTGGGTCAGGGCGGGTTCGGGTATGTGCACAAAGGTGTTTTGCCCAATGGAACAATAATTGCAGTGAAAAGTCTCAAGTCGGGCAGTGGGCAAGGAGAAAGAGAATTCGCAGCAGAGGTGGAGATCATTAGTCGCGTTCATCATCGACATCTTGTGTCACTGGTTGGATATTGTATTGTTGGTGAGCAGAGAATGCTGGTCTATGAATTTGTTCCCAACAAAACCATGGAATATCACTTGCATGGAAAGGGTCTACCACCTATGGATTGGCCAACTAGACTTCGGATTGCAGTTGGGTCTGCCAAAGGGCTTGCATACCTTCATGAAGATTGCCACCCGAAAATCATCCATCGTGATATCAAATCTGCTAACATTCTCATTGATAACAACTTCGAAGCCATGGTTGCAGATTTTGGGTTGGCTAAGCTGTCTTCTGACAATAACACCCACGTATCGACACGAGTCATGGGAACTTTCGGGTATTTAGCTCCAGAATATGCATCAAGTGGAAAATTGACAGAAAAGTCTGATGTTTTCTCATTTGGGGTCATGCTCCTGGAACTCATAACTGGAAAGAAACCAGTGGATCCTTCAAATGCAATGGACGACAGCTTGGTTGACTGGGCCCGACCACTTCTCACTCGTGCATTAGAGGATAATAATTACGCGGAGCTAGTAGATATTCGTTTGGACAATAACTACAACCCTAATGAGATGGCCCGGATGGTCGCGTGCGCGGCTGCAAGTATCCGTCACTCTGCTAGAAAGCGCGCAAAGATGAGCCAGATAGTACGTGCACTGGAAGGAGATGTATCGCTCGATGATCTAAATGAAGGAACAAAACCCGGGAAGAGCTCTATGTTCAACGCCAGTGGAGGAAGCTCGGACTACGATACGCAGGCGTACAATGCTGACATGAAGAAGTTCAGAAAGTTAGCCCTTTCAAGCCAGGAATTTGGGAGCAGTGATTTCGGGACTTCAAGTAATGACTCCAGAGAAATGAGCACACCCAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019722 GO:0019932 GO:0022622 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0090351 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

661

Amino Acids

69.83

Weight (kDa)

6.58

Isoelectric Point (pI)

69.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	318 - 524	6.7e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	320 - 587	1.1e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18470 AT2G18470 AT2G18470 AT2G18470
fragaria_vesca	FvH4_1g13460
malus_domestica	MD02G1149900.v1.1 MD15G1264500.v1.1
prunus_persica	Prupe.7G153100_v2.0.a1 Prupe.7G153100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0101841
rosa_multiflora	Rmu_sc0000838.1_g000006
rosa_roxburghii	Rroxscaffold_2G00141000
rosa_rugosa	Rorug02G0102200 Rorug02G0102300
rosa_samantha	Rh2AG149800 Rh2BG155300 Rh2CG155700 Rh2DG155500
rosa_wichuraiana	Rw2G011720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	593
AarI	CACCTGC	1 cut(s)	328
AasI	GACNNNNNNGTC	1 cut(s)	1486
Acc36I	ACCTGC	1 cut(s)	328
AccB1I	GGYRCC	1 cut(s)	121
AccB7I	CCANNNNNTGG	1 cut(s)	779
AccBSI	CCGCTC	1 cut(s)	828
AccI	GTMKAC	1 cut(s)	1216
AccII	CGCG	6 cut(s)	651, 1098, 1631, 1694, 1700, 1734
AclWI	GGATC	2 cut(s)	1544, 1557
AcoI	YGGCCR	1 cut(s)	1232
AcsI	RAATTY	3 cut(s)	1067, 1169, 1916
AcuI	CTGAAG	1 cut(s)	432
AcvI	CACGTG	1 cut(s)	488
AcyI	GRCGYC	2 cut(s)	122, 140
AdeI	CACNNNGTG	2 cut(s)	488, 779
AfaI	GTAC	3 cut(s)	662, 1755, 1868
AfiI	CCNNNNNNNGG	7 cut(s)	302, 303, 443, 683, 779, 782, 827
AgsI	TTSAA	7 cut(s)	546, 804, 898, 1557, 1828, 1908, 1944
AjnI	CCWGG	4 cut(s)	442, 775, 1518, 1911
AleI	CACNNNNGTG	1 cut(s)	996
AluBI	AGCT	9 cut(s)	584, 683, 925, 1390, 1451, 1575, 1636, 1818, 1845
AluI	AGCT	9 cut(s)	584, 683, 925, 1390, 1451, 1575, 1636, 1818, 1845
Alw21I	GWGCWC	7 cut(s)	475, 842, 908, 993, 1762, 1820, 1970
Alw26I	GTCTC	4 cut(s)	318, 413, 738, 1040
Alw44I	GTGCAC	3 cut(s)	471, 989, 1758
AlwI	GGATC	2 cut(s)	1544, 1557
AlwNI	CAGNNNCTG	1 cut(s)	410
Ama87I	CYCGRG	1 cut(s)	1808
AoxI	GGCC	4 cut(s)	954, 1232, 1587, 1680
ApaI	GGGCCC	1 cut(s)	1591
ApaLI	GTGCAC	3 cut(s)	471, 989, 1758
ApeKI	GCWGC	4 cut(s)	581, 929, 1073, 1703
ApoI	RAATTY	3 cut(s)	1067, 1169, 1916
ArsI	GACNNNNNNTTYG	2 cut(s)	188, 220
Asp700I	GAANNNNTTC	2 cut(s)	1173, 1886
AspLEI	GCGC	6 cut(s)	124, 433, 648, 1700, 1734, 1736
AspS9I	GGNCC	5 cut(s)	83, 306, 1587, 1588, 1681
AsuC2I	CCSGG	5 cut(s)	26, 369, 1684, 1809, 1810
AsuHPI	GGTGA	6 cut(s)	36, 144, 357, 842, 867, 1157
AsuII	TTCGAA	1 cut(s)	1356
AsuNHI	GCTAGC	1 cut(s)	925
AvaI	CYCGRG	1 cut(s)	1808
AvaII	GGWCC	2 cut(s)	83, 306
AxyI	CCTNAGG	1 cut(s)	261
BaeGI	GKGCMC	4 cut(s)	475, 993, 1591, 1762
BaeI	ACNNNNGTAYC	2 cut(s)	1398, 1431
BalI	TGGCCA	1 cut(s)	1234
BamHI	GGATCC	1 cut(s)	1549
BanI	GGYRCC	1 cut(s)	121
BanII	GRGCYC	2 cut(s)	1591, 1820
BauI	CACGAG	2 cut(s)	1422, 1605
BbrPI	CACGTG	1 cut(s)	488
BbsI	GAAGAC	5 cut(s)	198, 231, 264, 792, 1386
Bbv12I	GWGCWC	7 cut(s)	475, 842, 908, 993, 1762, 1820, 1970
BbvI	GCAGC	4 cut(s)	593, 941, 1085, 1690
BccI	CCATC	9 cut(s)	85, 94, 139, 184, 349, 886, 1320, 1672, 1681
BceAI	ACGGC	1 cut(s)	4
BcgI	CGANNNNNNTGC	2 cut(s)	1915, 1949
BciT130I	CCWGG	4 cut(s)	444, 777, 1520, 1913
BciVI	GTATCC	1 cut(s)	1721
BclI	TGATCA	1 cut(s)	949
BcnI	CCSGG	5 cut(s)	26, 369, 1684, 1809, 1810
BcoDI	GTCTC	4 cut(s)	318, 413, 738, 1040
BfaI	CTAG	5 cut(s)	492, 926, 1239, 1637, 1725
BfoI	RGCGCY	2 cut(s)	125, 649
BfuAI	ACCTGC	1 cut(s)	328
BfuI	GTATCC	1 cut(s)	1721
BlpI	GCTNAGC	1 cut(s)	1386
BmcAI	AGTACT	1 cut(s)	662
Bme1390I	CCNGG	9 cut(s)	26, 369, 444, 777, 1520, 1684, 1809, 1810, 1913
Bme18I	GGWCC	2 cut(s)	83, 306
BmeT110I	CYCGRG	1 cut(s)	1808
BmgT120I	GGNCC	5 cut(s)	83, 306, 1587, 1588, 1681
BmiI	GGNNCC	5 cut(s)	123, 307, 308, 1551, 1589
BmrFI	CCNGG	9 cut(s)	26, 369, 444, 777, 1520, 1684, 1809, 1810, 1913
BmrI	ACTGGG	2 cut(s)	304, 1594
BmsI	GCATC	5 cut(s)	155, 397, 633, 661, 1472
BmtI	GCTAGC	1 cut(s)	929
BmuI	ACTGGG	2 cut(s)	304, 1594
BoxI	GACNNNNGTC	1 cut(s)	1424
BpiI	GAAGAC	5 cut(s)	198, 231, 264, 792, 1386
BplI	GAGNNNNNCTC	2 cut(s)	418, 450
BpmI	CTGGAG	3 cut(s)	426, 1437, 1939
Bpu10I	CCTNAGC	1 cut(s)	357
Bpu1102I	GCTNAGC	1 cut(s)	1386
Bpu14I	TTCGAA	1 cut(s)	1356
BpuEI	CTTGAG	1 cut(s)	1022
BpuMI	CCSGG	5 cut(s)	26, 369, 1684, 1809, 1810
BsaAI	YACGTR	3 cut(s)	488, 1414, 1757
BsaHI	GRCGYC	2 cut(s)	122, 140
BsaI	GGTCTC	1 cut(s)	738
BsaJI	CCNNGG	6 cut(s)	24, 228, 443, 1188, 1362, 1808
BsaXI	ACNNNNNCTCC	4 cut(s)	328, 358, 735, 765
Bsc4I	CCNNNNNNNGG	7 cut(s)	302, 303, 443, 683, 779, 782, 827
Bse118I	RCCGGY	2 cut(s)	142, 382
Bse1I	ACTGG	7 cut(s)	310, 1128, 1537, 1544, 1589, 1767, 1833
Bse21I	CCTNAGG	1 cut(s)	261
Bse3DI	GCAATG	2 cut(s)	860, 1569
BseBI	CCWGG	4 cut(s)	444, 777, 1520, 1913
BseDI	CCNNGG	6 cut(s)	24, 228, 443, 1188, 1362, 1808
BseGI	GGATG	4 cut(s)	131, 289, 1308, 1692
BseLI	CCNNNNNNNGG	7 cut(s)	302, 303, 443, 683, 779, 782, 827
BseMI	GCAATG	2 cut(s)	860, 1569
BseMII	CTCAG	1 cut(s)	864
BseNI	ACTGG	7 cut(s)	310, 1128, 1537, 1544, 1589, 1767, 1833
BsePI	GCGCGC	1 cut(s)	1732
BseRI	GAGGAG	5 cut(s)	426, 429, 649, 652, 801
BseSI	GKGCMC	4 cut(s)	475, 993, 1591, 1762
BseXI	GCAGC	4 cut(s)	593, 941, 1085, 1690
BsgI	GTGCAG	1 cut(s)	306
Bsh1236I	CGCG	6 cut(s)	651, 1098, 1631, 1694, 1700, 1734
BshFI	GGCC	4 cut(s)	956, 1234, 1589, 1682
BshNI	GGYRCC	1 cut(s)	121
BsiHKAI	GWGCWC	7 cut(s)	475, 842, 908, 993, 1762, 1820, 1970
BsiHKCI	CYCGRG	1 cut(s)	1808
BsiSI	CCGG	7 cut(s)	26, 56, 143, 368, 383, 1684, 1809
BslFI	GGGAC	3 cut(s)	7, 292, 1951
BslI	CCNNNNNNNGG	7 cut(s)	302, 303, 443, 683, 779, 782, 827
BsmAI	GTCTC	4 cut(s)	318, 413, 738, 1040
BsmFI	GGGAC	3 cut(s)	7, 292, 1951
BsmI	GAATGC	1 cut(s)	1161
BsnI	GGCC	4 cut(s)	956, 1234, 1589, 1682
Bso31I	GGTCTC	1 cut(s)	738
BsoBI	CYCGRG	1 cut(s)	1808
Bsp119I	TTCGAA	1 cut(s)	1356
Bsp120I	GGGCCC	1 cut(s)	1587
Bsp1286I	GDGCHC	8 cut(s)	475, 842, 908, 993, 1591, 1762, 1820, 1970
Bsp143I	GATC	4 cut(s)	949, 1086, 1549, 1786
Bsp1720I	GCTNAGC	1 cut(s)	1386
Bsp19I	CCATGG	2 cut(s)	1188, 1362
BspANI	GGCC	4 cut(s)	956, 1234, 1589, 1682
BspCNI	CTCAG	1 cut(s)	863
BspFNI	CGCG	6 cut(s)	651, 1098, 1631, 1694, 1700, 1734
BspHI	TCATGA	1 cut(s)	1285
BspLI	GGNNCC	5 cut(s)	123, 307, 308, 1551, 1589
BspMI	ACCTGC	1 cut(s)	328
BspOI	GCTAGC	1 cut(s)	929
BspPI	GGATC	2 cut(s)	1544, 1557
BspQI	GCTCTTC	1 cut(s)	1808
BspT104I	TTCGAA	1 cut(s)	1356
BspT107I	GGYRCC	1 cut(s)	121
BspTNI	GGTCTC	1 cut(s)	738
BsrBI	CCGCTC	1 cut(s)	828
BsrDI	GCAATG	2 cut(s)	860, 1569
BsrFI	RCCGGY	2 cut(s)	142, 382
BsrI	ACTGG	7 cut(s)	310, 1128, 1537, 1544, 1589, 1767, 1833
BssAI	RCCGGY	2 cut(s)	142, 382
BssECI	CCNNGG	6 cut(s)	24, 228, 443, 1188, 1362, 1808
BssHII	GCGCGC	1 cut(s)	1732
BssMI	GATC	4 cut(s)	949, 1086, 1549, 1786
BssNI	GRCGYC	2 cut(s)	122, 140
BssSI	CACGAG	2 cut(s)	1422, 1605
BssT1I	CCWWGG	3 cut(s)	228, 1188, 1362
Bst2BI	CACGAG	2 cut(s)	1422, 1605
Bst2UI	CCWGG	4 cut(s)	444, 777, 1520, 1913
Bst4CI	ACNGT	2 cut(s)	14, 162
Bst6I	CTCTTC	3 cut(s)	37, 626, 1808
BstACI	GRCGYC	2 cut(s)	122, 140
BstAPI	GCANNNNNTGC	1 cut(s)	1156
BstBAI	YACGTR	3 cut(s)	488, 1414, 1757
BstBI	TTCGAA	1 cut(s)	1356
BstC8I	GCNNGC	7 cut(s)	144, 384, 927, 1275, 1696, 1734, 1863
BstDEI	CTNAG	4 cut(s)	261, 357, 850, 1386
BstDSI	CCRYGG	2 cut(s)	1188, 1362
BstENI	CCTNNNNNAGG	1 cut(s)	441
BstF5I	GGATG	4 cut(s)	131, 289, 1308, 1692
BstFNI	CGCG	6 cut(s)	651, 1098, 1631, 1694, 1700, 1734
BstH2I	RGCGCY	2 cut(s)	125, 649
BstHHI	GCGC	6 cut(s)	124, 433, 648, 1700, 1734, 1736
BstKTI	GATC	4 cut(s)	952, 1089, 1552, 1789
BstMAI	GTCTC	4 cut(s)	318, 413, 738, 1040
BstMBI	GATC	4 cut(s)	949, 1086, 1549, 1786
BstMWI	GCNNNNNNNGC	9 cut(s)	383, 407, 569, 578, 680, 1156, 1367, 1700, 1871
BstNI	CCWGG	4 cut(s)	444, 777, 1520, 1913
BstPAI	GACNNNNGTC	1 cut(s)	1424
BstSCI	CCNGG	9 cut(s)	24, 367, 442, 775, 1518, 1682, 1807, 1808, 1911
BstSLI	GKGCMC	4 cut(s)	475, 993, 1591, 1762
BstUI	CGCG	6 cut(s)	651, 1098, 1631, 1694, 1700, 1734
BstV1I	GCAGC	4 cut(s)	593, 941, 1085, 1690
BstV2I	GAAGAC	5 cut(s)	198, 231, 264, 792, 1386
BstX2I	RGATCY	1 cut(s)	1549
BstXI	CCANNNNNNTGG	3 cut(s)	776, 964, 1919
BstYI	RGATCY	1 cut(s)	1549
Bsu36I	CCTNAGG	1 cut(s)	261
BsuI	GTATCC	1 cut(s)	1721
BsuRI	GGCC	4 cut(s)	956, 1234, 1589, 1682
BtgI	CCRYGG	2 cut(s)	1188, 1362
BtgZI	GCGATG	3 cut(s)	201, 234, 267
BtsCI	GGATG	4 cut(s)	131, 289, 1308, 1692
BtsI	GCAGTG	3 cut(s)	1032, 1054, 1933
BtsIMutI	CAGTG	8 cut(s)	19, 1032, 1054, 1121, 1551, 1760, 1840, 1933
BveI	ACCTGC	1 cut(s)	328
Cac8I	GCNNGC	7 cut(s)	144, 384, 927, 1275, 1696, 1734, 1863
CaiI	CAGNNNCTG	1 cut(s)	410
CciI	TCATGA	1 cut(s)	1285
CfoI	GCGC	6 cut(s)	124, 433, 648, 1700, 1734, 1736
Cfr10I	RCCGGY	2 cut(s)	142, 382
Cfr13I	GGNCC	5 cut(s)	83, 306, 1587, 1588, 1681
Cfr9I	CCCGGG	1 cut(s)	1808
CseI	GACGC	1 cut(s)	148
CsiI	ACCWGGT	1 cut(s)	775
Csp6I	GTAC	3 cut(s)	661, 1754, 1867
CspCI	CAANNNNNGTGG	2 cut(s)	1816, 1851
CviAII	CATG	9 cut(s)	353, 749, 1189, 1205, 1286, 1363, 1429, 1513, 1879
CviQI	GTAC	3 cut(s)	661, 1754, 1867
DdeI	CTNAG	4 cut(s)	261, 357, 850, 1386
DinI	GGCGCC	1 cut(s)	123
DpnI	GATC	4 cut(s)	951, 1088, 1551, 1788
DpnII	GATC	4 cut(s)	949, 1086, 1549, 1786
DraIII	CACNNNGTG	2 cut(s)	488, 779
DrdI	GACNNNNNNGTC	1 cut(s)	1486
DseDI	GACNNNNNNGTC	1 cut(s)	1486
EaeI	YGGCCR	1 cut(s)	1232
Eam1104I	CTCTTC	3 cut(s)	37, 626, 1808
EarI	CTCTTC	3 cut(s)	37, 626, 1808
EciI	GGCGGA	1 cut(s)	177
Ecl136II	GAGCTC	1 cut(s)	1818
Eco130I	CCWWGG	3 cut(s)	228, 1188, 1362
Eco24I	GRGCYC	2 cut(s)	1591, 1820
Eco31I	GGTCTC	1 cut(s)	738
Eco32I	GATATC	1 cut(s)	1321
Eco47I	GGWCC	2 cut(s)	83, 306
Eco53kI	GAGCTC	1 cut(s)	1818
Eco57I	CTGAAG	1 cut(s)	432
Eco72I	CACGTG	1 cut(s)	488
Eco81I	CCTNAGG	1 cut(s)	261
Eco88I	CYCGRG	1 cut(s)	1808
EcoICRI	GAGCTC	1 cut(s)	1818
EcoNI	CCTNNNNNAGG	1 cut(s)	441
EcoO109I	RGGNCCY	1 cut(s)	306
EcoRI	GAATTC	1 cut(s)	1067
EcoRII	CCWGG	4 cut(s)	442, 775, 1518, 1911
EcoRV	GATATC	1 cut(s)	1321
EcoT14I	CCWWGG	3 cut(s)	228, 1188, 1362
EcoT22I	ATGCAT	1 cut(s)	1465
EcoT38I	GRGCYC	2 cut(s)	1591, 1820
EgeI	GGCGCC	1 cut(s)	123
EheI	GGCGCC	1 cut(s)	123
ErhI	CCWWGG	3 cut(s)	228, 1188, 1362
FaeI	CATG	9 cut(s)	356, 752, 1192, 1208, 1289, 1366, 1432, 1516, 1882
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FaqI	GGGAC	3 cut(s)	7, 292, 1951
FatI	CATG	9 cut(s)	352, 748, 1188, 1204, 1285, 1362, 1428, 1512, 1878
FauI	CCCGC	2 cut(s)	556, 968
FauNDI	CATATG	1 cut(s)	916
FbaI	TGATCA	1 cut(s)	949
FblI	GTMKAC	1 cut(s)	1216
FokI	GGATG	4 cut(s)	118, 276, 1295, 1699
FriOI	GRGCYC	2 cut(s)	1591, 1820
FspBI	CTAG	5 cut(s)	492, 926, 1239, 1637, 1725
GlaI	GCGC	6 cut(s)	123, 432, 647, 1699, 1733, 1735
GsuI	CTGGAG	3 cut(s)	426, 1437, 1939
HaeII	RGCGCY	2 cut(s)	125, 649
HaeIII	GGCC	4 cut(s)	956, 1234, 1589, 1682
HapII	CCGG	7 cut(s)	26, 56, 143, 368, 383, 1684, 1809
HgaI	GACGC	1 cut(s)	148
HhaI	GCGC	6 cut(s)	124, 433, 648, 1700, 1734, 1736
Hin1I	GRCGYC	2 cut(s)	122, 140
Hin1II	CATG	9 cut(s)	356, 752, 1192, 1208, 1289, 1366, 1432, 1516, 1882
Hin6I	GCGC	6 cut(s)	122, 431, 646, 1698, 1732, 1734
HinP1I	GCGC	6 cut(s)	122, 431, 646, 1698, 1732, 1734
HincII	GTYRAC	1 cut(s)	1582
HindII	GTYRAC	1 cut(s)	1582
HpaII	CCGG	7 cut(s)	26, 56, 143, 368, 383, 1684, 1809
HphI	GGTGA	6 cut(s)	36, 144, 357, 842, 867, 1157
Hpy166II	GTNNAC	5 cut(s)	473, 991, 1217, 1582, 1760
Hpy188I	TCNGA	8 cut(s)	10, 456, 520, 1248, 1399, 1492, 1849, 1892
Hpy188III	TCNNGA	6 cut(s)	628, 1286, 1316, 1454, 1936, 1956
Hpy8I	GTNNAC	5 cut(s)	473, 991, 1217, 1582, 1760
Hpy99I	CGWCG	2 cut(s)	142, 611
HpyAV	CCTTC	5 cut(s)	919, 1292, 1563, 1760, 1790
HpyCH4III	ACNGT	2 cut(s)	14, 162
HpyCH4IV	ACGT	3 cut(s)	487, 1413, 1756
HpyF10VI	GCNNNNNNNGC	9 cut(s)	383, 407, 569, 578, 680, 1156, 1367, 1700, 1871
HpyF3I	CTNAG	4 cut(s)	261, 357, 850, 1386
HpySE526I	ACGT	3 cut(s)	487, 1413, 1756
Hsp92I	GRCGYC	2 cut(s)	122, 140
Hsp92II	CATG	9 cut(s)	356, 752, 1192, 1208, 1289, 1366, 1432, 1516, 1882
HspAI	GCGC	6 cut(s)	122, 431, 646, 1698, 1732, 1734
KasI	GGCGCC	1 cut(s)	121
KflI	GGGWCCC	1 cut(s)	306
KroI	GCCGGC	2 cut(s)	142, 382
KroNI	GCCGGC	2 cut(s)	144, 384
Ksp22I	TGATCA	1 cut(s)	949
Kzo9I	GATC	4 cut(s)	949, 1086, 1549, 1786
LguI	GCTCTTC	1 cut(s)	1808
LmnI	GCTCC	5 cut(s)	679, 1456, 1521, 1633, 1923
Lsp1109I	GCAGC	4 cut(s)	593, 941, 1085, 1690
LweI	GCATC	5 cut(s)	155, 397, 633, 661, 1472
MabI	ACCWGGT	1 cut(s)	775
MaeI	CTAG	5 cut(s)	492, 926, 1239, 1637, 1725
MaeII	ACGT	3 cut(s)	487, 1413, 1756
MaeIII	GTNAC	2 cut(s)	1119, 1715
MalI	GATC	4 cut(s)	951, 1088, 1551, 1788
MbiI	CCGCTC	1 cut(s)	828
MboI	GATC	4 cut(s)	949, 1086, 1549, 1786
MfeI	CAATTG	1 cut(s)	573
MflI	RGATCY	1 cut(s)	1549
MhlI	GDGCHC	8 cut(s)	475, 842, 908, 993, 1591, 1762, 1820, 1970
MlsI	TGGCCA	1 cut(s)	1234
MluNI	TGGCCA	1 cut(s)	1234
Mly113I	GGCGCC	1 cut(s)	122
MlyI	GAGTC	8 cut(s)	23, 53, 104, 194, 227, 260, 1434, 1946
MmeI	TCCRAC	1 cut(s)	1108
Mox20I	TGGCCA	1 cut(s)	1234
Mph1103I	ATGCAT	1 cut(s)	1465
MroNI	GCCGGC	2 cut(s)	142, 382
MroXI	GAANNNNTTC	2 cut(s)	1173, 1886
MscI	TGGCCA	1 cut(s)	1234
MslI	CAYNNNNRTG	2 cut(s)	996, 1203
Msp20I	TGGCCA	1 cut(s)	1234
MspA1I	CMGCKG	2 cut(s)	401, 584
MspI	CCGG	7 cut(s)	26, 56, 143, 368, 383, 1684, 1809
MspR9I	CCNGG	9 cut(s)	26, 369, 444, 777, 1520, 1684, 1809, 1810, 1913
MunI	CAATTG	1 cut(s)	573
Mva1269I	GAATGC	1 cut(s)	1161
MvaI	CCWGG	4 cut(s)	444, 777, 1520, 1913
MvnI	CGCG	6 cut(s)	651, 1098, 1631, 1694, 1700, 1734
MwoI	GCNNNNNNNGC	9 cut(s)	383, 407, 569, 578, 680, 1156, 1367, 1700, 1871
NaeI	GCCGGC	2 cut(s)	144, 384
NarI	GGCGCC	1 cut(s)	122
NciI	CCSGG	5 cut(s)	26, 369, 1684, 1809, 1810
NcoI	CCATGG	2 cut(s)	1188, 1362
NdeI	CATATG	1 cut(s)	916
NdeII	GATC	4 cut(s)	949, 1086, 1549, 1786
NgoMIV	GCCGGC	2 cut(s)	142, 382
NheI	GCTAGC	1 cut(s)	925
NlaIII	CATG	9 cut(s)	356, 752, 1192, 1208, 1289, 1366, 1432, 1516, 1882
NlaIV	GGNNCC	5 cut(s)	123, 307, 308, 1551, 1589
NmuCI	GTSAC	2 cut(s)	1119, 1715
NsiI	ATGCAT	1 cut(s)	1465
NspV	TTCGAA	1 cut(s)	1356
OliI	CACNNNNGTG	1 cut(s)	996
PagI	TCATGA	1 cut(s)	1285
PaqCI	CACCTGC	1 cut(s)	328
PauI	GCGCGC	1 cut(s)	1732
PciSI	GCTCTTC	1 cut(s)	1808
PcsI	WCGNNNNNNNCGW	1 cut(s)	59
PctI	GAATGC	1 cut(s)	1161
PdiI	GCCGGC	2 cut(s)	144, 384
PdmI	GAANNNNTTC	2 cut(s)	1173, 1886
PfeI	GAWTC	2 cut(s)	98, 362
PflMI	CCANNNNNTGG	1 cut(s)	779
PfoI	TCCNGGA	1 cut(s)	1518
PleI	GAGTC	8 cut(s)	23, 53, 104, 194, 227, 260, 1433, 1946
PluTI	GGCGCC	1 cut(s)	125
PmaCI	CACGTG	1 cut(s)	488
PmlI	CACGTG	1 cut(s)	488
PpsI	GAGTC	8 cut(s)	23, 53, 104, 194, 227, 260, 1433, 1946
Ppu21I	YACGTR	3 cut(s)	488, 1414, 1757
PpuMI	RGGWCCY	1 cut(s)	306
PshAI	GACNNNNGTC	1 cut(s)	1424
PsiI	TTATAA	1 cut(s)	593
Psp124BI	GAGCTC	1 cut(s)	1820
Psp5II	RGGWCCY	1 cut(s)	306
Psp6I	CCWGG	4 cut(s)	442, 775, 1518, 1911
PspCI	CACGTG	1 cut(s)	488
PspGI	CCWGG	4 cut(s)	442, 775, 1518, 1911
PspN4I	GGNNCC	5 cut(s)	123, 307, 308, 1551, 1589
PspOMI	GGGCCC	1 cut(s)	1587
PspPI	GGNCC	5 cut(s)	83, 306, 1587, 1588, 1681
PspPPI	RGGWCCY	1 cut(s)	306
PstNI	CAGNNNCTG	1 cut(s)	410
PsuI	RGATCY	1 cut(s)	1549
PteI	GCGCGC	1 cut(s)	1732
PvuII	CAGCTG	1 cut(s)	584
RsaI	GTAC	3 cut(s)	662, 1755, 1868
RsaNI	GTAC	3 cut(s)	661, 1754, 1867
RseI	CAYNNNNRTG	2 cut(s)	996, 1203
SacI	GAGCTC	1 cut(s)	1820
SapI	GCTCTTC	1 cut(s)	1808
Sau3AI	GATC	4 cut(s)	949, 1086, 1549, 1786
Sau96I	GGNCC	5 cut(s)	83, 306, 1587, 1588, 1681
ScaI	AGTACT	1 cut(s)	662
SchI	GAGTC	8 cut(s)	23, 53, 104, 194, 227, 260, 1434, 1946
ScrFI	CCNGG	9 cut(s)	26, 369, 444, 777, 1520, 1684, 1809, 1810, 1913
SduI	GDGCHC	8 cut(s)	475, 842, 908, 993, 1591, 1762, 1820, 1970
SexAI	ACCWGGT	1 cut(s)	775
SfaNI	GCATC	5 cut(s)	155, 397, 633, 661, 1472
SfoI	GGCGCC	1 cut(s)	123
SfuI	TTCGAA	1 cut(s)	1356
SinI	GGWCC	2 cut(s)	83, 306
SmaI	CCCGGG	1 cut(s)	1810
SmiMI	CAYNNNNRTG	2 cut(s)	996, 1203
SmlI	CTYRAG	1 cut(s)	1037
SmoI	CTYRAG	1 cut(s)	1037
SspDI	GGCGCC	1 cut(s)	121
SspMI	CTAG	5 cut(s)	492, 926, 1239, 1637, 1725
SstI	GAGCTC	1 cut(s)	1820
StyD4I	CCNGG	9 cut(s)	24, 367, 442, 775, 1518, 1682, 1807, 1808, 1911
StyI	CCWWGG	3 cut(s)	228, 1188, 1362
TaaI	ACNGT	2 cut(s)	14, 162
TaiI	ACGT	3 cut(s)	490, 1416, 1759
TaqI	TCGA	5 cut(s)	137, 1108, 1356, 1418, 1782
TatI	WGTACW	1 cut(s)	660
TauI	GCSGC	7 cut(s)	172, 223, 404, 563, 651, 935, 1703
TfiI	GAWTC	2 cut(s)	98, 362
TscAI	CASTG	8 cut(s)	19, 1032, 1054, 1128, 1551, 1767, 1840, 1933
TseFI	GTSAC	2 cut(s)	1119, 1715
TseI	GCWGC	4 cut(s)	581, 929, 1073, 1703
Tsp45I	GTSAC	2 cut(s)	1119, 1715
TspGWI	ACGGA	1 cut(s)	1703
TspMI	CCCGGG	1 cut(s)	1808
TspRI	CASTG	8 cut(s)	19, 1032, 1054, 1128, 1551, 1767, 1840, 1933
Van91I	CCANNNNNTGG	1 cut(s)	779
VneI	GTGCAC	3 cut(s)	471, 989, 1758
VpaK11BI	GGWCC	2 cut(s)	83, 306
XagI	CCTNNNNNAGG	1 cut(s)	441
XapI	RAATTY	3 cut(s)	1067, 1169, 1916
XcmI	CCANNNNNNNNNTGG	3 cut(s)	776, 1186, 1227
XmaI	CCCGGG	1 cut(s)	1808
XmiI	GTMKAC	1 cut(s)	1216
XmnI	GAANNNNTTC	2 cut(s)	1173, 1886
XspI	CTAG	5 cut(s)	492, 926, 1239, 1637, 1725
ZrmI	AGTACT	1 cut(s)	662
Zsp2I	ATGCAT	1 cut(s)	1465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.