Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0011637

Physical Location & Seq

Genomic Coordinates Forward (+)

79324498 .. 79328062

Gene Structure 3565 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00141000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGCTAATGACTCTGATTCTCCATCACCGGATTCTTCACCTTCACCACCAACATCATCAGACTCCTCGTCTTCGTCGTCATCCTCACCCGCACCTTCAAAGGAATCCCCAAAGAATTCGAAAGATACACAGTCGCCAACCCCATCTCCTCCAAAAAACTCCTCACCTCCGCCATCTTCCCCTCCACCGTCCTCACCACCACCTTCGTCTCCTCCTCCATCGACACCTCCCCCGAAGGACGATGACGATCAATCGCCCGAGTCCCCGAAACAAAACTCCTCGCCTGCTCCACCGAAGGACAACTCGCAGCCAGCTCCGGCCACTCCGGCAACTCCGGCCACTCCGGCTGGTAGCAATACACCACCCAAACCAAAAGCTCCGGGTGTTCCGGCTACCACTGTCTATGCGCCGCCTCCCCCACGTGCCAAAACTTCTACCTCCAATGCAGTGACACCACCACCACCTTCCAACGACTCTTCAGATGATAGCAGTGGCAATGACTCCGATAAAGGGGTGGTGGTAGGAGTGGGGATCGGCGCCGGAGTAATTGTACTTCTGTTGCTCGTCATTTGTGTGCTTTGCTTCAGGAGGAAGAGGAGAAAGAATGACCACATGCAATATTATGGAGATCCACTCAAAGGTGGTGGTCATGACTACTACAACACTACACAGCAACACAATTGGAACATGAATACACCGCCACAAGGAGACCATGTGGTCAGGCTAAACCAAGCAGCAGCTGGTAGTAATCGTGGTGGTGGTGCCTGGCCTTCACCGCCTCCTCCTATGCCGATGAGCGGTGAAATGACAGGGAATTTCTCAGGACCCCACGGACCCCCTTGCCACCTCCCTCACCAAACATGTCACTCGGCGGCAACCGCTACTAACGGGTTCTCACAAGCCAATTTGTTGGGTCAAGGTGGGTTCGGGTTTGTGCACAAGGGCGTCCTCCCCAGTGGAAAAGAGGTTGCGGTGAAGAGTCTCAAGGTCGGCAGTGGGCAAGGAGAACGGGAATTTGCTGCGGAGGTCGAGATCATTAGCCGAGTTCATCACCGACATCTAGTGTCGCTCGTTGGATATTGCATTTCCGGTGGCCATAGATTGTTGGTCTATGAGTTTGTTCCCAATTCAACCATGGAACATCACTTGCATGGCCATCCCAAGATCATCCATCGTGATATCAAATCTGCTAATATTCTCCTGGATAACAACTATGAGGCCATGGTTGCTGATTTTGGGTTGGCTAAGCTGTCATCTGACAACTACACCCATGTTTCTACACGGGTTATGGGTACTTTCGGGTATTTGGCTCCAGAATATGCATCAAGTGGAAAGTTGACAGAGAAGTCCGATGTCTTCTCATTTGGAGTCATGCTTTTGGAACTCATAACTGGAAAAAGACCGGTTGATCCTTCAAATGCCATGGAAGACAGCTTAGTGGACTGGGCTCGACCACTTCTCACGCGGGCACTAGAGGATGGTAACTATACAGAGTTGGTGGATATCCGCTTGGACAACGCCTACAACAGTCAAGAAATGGCACGCATGGTCGCCTGTGCTGCTGCGAGTATTCGTCACTCTGCTAAACGACGCCCAAAGATGAGCCAGATCGTACGCGCATTGGAAGGAGATGTGTCGTTAGACGACTTAAATGAGGGGGTAAAACCAGGGCAGACCGTTATGATGAATCCCGCAGCTGGTGGAAGCTCGGGCTATAACACGGAGGCATACAATGCCGACATGAAGAAGTTCAGGAAGTTAGCCCTTTCGAGCCAGACGAGCAGTGAGTTCGGAACTAACAGTTCCGACTCCACAGAAATGACCATCCCTGCGAACCCAAAGCCGCCACCAAAGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019722 GO:0019932 GO:0022622 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0090351 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

619

Amino Acids

65.38

Weight (kDa)

6.7

Isoelectric Point (pI)

61.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	299 - 384	6.7e-10	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	301 - 386	1.6e-13	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	381 - 479	5.6e-24	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	388 - 541	3.6e-21	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18470 AT2G18470 AT2G18470 AT2G18470
fragaria_vesca	FvH4_1g13460
malus_domestica	MD02G1149900.v1.1 MD15G1264500.v1.1
prunus_persica	Prupe.7G153100_v2.0.a1 Prupe.7G153100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0101841
rosa_multiflora	Rmu_sc0000838.1_g000006
rosa_roxburghii	Rroxscaffold_2G00141000
rosa_rugosa	Rorug02G0102200 Rorug02G0102300
rosa_samantha	Rh2AG149800 Rh2BG155300 Rh2CG155700 Rh2DG155500
rosa_wichuraiana	Rw2G011720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	716, 1345
AccB1I	GGYRCC	2 cut(s)	536, 761
AccBSI	CCGCTC	1 cut(s)	798
AccII	CGCG	2 cut(s)	1465, 1617
AclWI	GGATC	3 cut(s)	539, 623, 1403
AcoI	YGGCCR	4 cut(s)	318, 336, 1093, 1153
AcsI	RAATTY	3 cut(s)	115, 814, 1013
AcuI	CTGAAG	2 cut(s)	462, 568
AcvI	CACGTG	1 cut(s)	422
AcyI	GRCGYC	3 cut(s)	537, 945, 1591
AfaI	GTAC	3 cut(s)	552, 1294, 1614
AfiI	CCNNNNNNNGG	5 cut(s)	510, 638, 704, 797, 1697
AflIII	ACRYGT	1 cut(s)	860
AgeI	ACCGGT	1 cut(s)	1402
AgsI	TTSAA	3 cut(s)	99, 1131, 1416
AhdI	GACNNNNNGTC	1 cut(s)	67
AjnI	CCWGG	3 cut(s)	764, 1200, 1666
AluBI	AGCT	7 cut(s)	314, 377, 740, 1249, 1434, 1697, 1707
AluI	AGCT	7 cut(s)	314, 377, 740, 1249, 1434, 1697, 1707
Alw21I	GWGCWC	1 cut(s)	939
Alw26I	GTCTC	3 cut(s)	213, 702, 986
Alw44I	GTGCAC	1 cut(s)	935
AlwI	GGATC	3 cut(s)	539, 623, 1403
AlwNI	CAGNNNCTG	1 cut(s)	740
Ama87I	CYCGRG	2 cut(s)	257, 1708
AoxI	GGCC	6 cut(s)	318, 336, 767, 1093, 1153, 1218
ApaLI	GTGCAC	1 cut(s)	935
ApeKI	GCWGC	7 cut(s)	307, 734, 737, 1019, 1559, 1562, 1694
ApoI	RAATTY	3 cut(s)	115, 814, 1013
AsiGI	ACCGGT	1 cut(s)	1402
Asp700I	GAANNNNTTC	1 cut(s)	1748
AspLEI	GCGC	3 cut(s)	409, 539, 1619
AspS9I	GGNCC	2 cut(s)	824, 833
AsuC2I	CCSGG	1 cut(s)	381
AsuII	TTCGAA	1 cut(s)	119
AvaI	CYCGRG	2 cut(s)	257, 1708
AvaII	GGWCC	2 cut(s)	824, 833
BaeGI	GKGCMC	2 cut(s)	939, 1471
BalI	TGGCCA	2 cut(s)	1095, 1155
BanI	GGYRCC	2 cut(s)	536, 761
BanII	GRGCYC	1 cut(s)	1450
BarI	GAAGNNNNNNTAC	2 cut(s)	537, 569
BbrPI	CACGTG	1 cut(s)	422
BbsI	GAAGAC	3 cut(s)	63, 1348, 1434
Bbv12I	GWGCWC	1 cut(s)	939
BbvI	GCAGC	7 cut(s)	319, 746, 749, 1006, 1546, 1549, 1706
BccI	CCATC	8 cut(s)	31, 151, 181, 226, 1164, 1179, 1472, 1832
BcgI	CGANNNNNNTGC	2 cut(s)	1771, 1805
BciT130I	CCWGG	3 cut(s)	766, 1202, 1668
BcnI	CCSGG	1 cut(s)	381
BcoDI	GTCTC	3 cut(s)	213, 702, 986
BfaI	CTAG	2 cut(s)	1061, 1472
BfoI	RGCGCY	1 cut(s)	540
BglI	GCCNNNNNGGC	2 cut(s)	326, 344
BlpI	GCTNAGC	1 cut(s)	1245
Bme1390I	CCNGG	4 cut(s)	381, 766, 1202, 1668
Bme18I	GGWCC	2 cut(s)	824, 833
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	2 cut(s)	257, 1708
BmgT120I	GGNCC	2 cut(s)	824, 833
BmiI	GGNNCC	5 cut(s)	538, 763, 826, 835, 1311
BmrFI	CCNGG	4 cut(s)	381, 766, 1202, 1668
BmrI	ACTGGG	2 cut(s)	948, 1453
BmsI	GCATC	1 cut(s)	1331
BmuI	ACTGGG	2 cut(s)	948, 1453
BpiI	GAAGAC	3 cut(s)	63, 1348, 1434
BplI	GAGNNNNNCTC	2 cut(s)	618, 650
BpmI	CTGGAG	1 cut(s)	1296
Bpu1102I	GCTNAGC	1 cut(s)	1245
Bpu14I	TTCGAA	1 cut(s)	119
BpuEI	CTTGAG	1 cut(s)	968
BpuMI	CCSGG	1 cut(s)	381
BsaAI	YACGTR	1 cut(s)	422
BsaBI	GATNNNNATC	1 cut(s)	246
BsaHI	GRCGYC	3 cut(s)	537, 945, 1591
BsaI	GGTCTC	1 cut(s)	702
BsaJI	CCNNGG	5 cut(s)	829, 1134, 1221, 1422, 1667
BsaWI	WCCGGW	3 cut(s)	28, 1088, 1402
BsaXI	ACNNNNNCTCC	6 cut(s)	130, 160, 534, 564, 699, 729
Bsc4I	CCNNNNNNNGG	5 cut(s)	510, 638, 704, 797, 1697
Bse118I	RCCGGY	1 cut(s)	1402
Bse1I	ACTGG	3 cut(s)	954, 1396, 1448
Bse3DI	GCAATG	1 cut(s)	502
Bse8I	GATNNNNATC	1 cut(s)	246
BseBI	CCWGG	3 cut(s)	766, 1202, 1668
BseDI	CCNNGG	5 cut(s)	829, 1134, 1221, 1422, 1667
BseGI	GGATG	5 cut(s)	80, 1156, 1167, 1483, 1824
BseJI	GATNNNNATC	1 cut(s)	246
BseLI	CCNNNNNNNGG	5 cut(s)	510, 638, 704, 797, 1697
BseMI	GCAATG	1 cut(s)	502
BseMII	CTCAG	1 cut(s)	834
BseNI	ACTGG	3 cut(s)	954, 1396, 1448
BseRI	GAGGAG	8 cut(s)	55, 138, 151, 201, 204, 268, 610, 771
BseSI	GKGCMC	2 cut(s)	939, 1471
BseXI	GCAGC	7 cut(s)	319, 746, 749, 1006, 1546, 1549, 1706
Bsh1236I	CGCG	2 cut(s)	1465, 1617
BshFI	GGCC	6 cut(s)	320, 338, 769, 1095, 1155, 1220
BshNI	GGYRCC	2 cut(s)	536, 761
BshTI	ACCGGT	1 cut(s)	1402
BsiHKAI	GWGCWC	1 cut(s)	939
BsiHKCI	CYCGRG	2 cut(s)	257, 1708
BsiWI	CGTACG	1 cut(s)	1612
BslFI	GGGAC	1 cut(s)	247
BslI	CCNNNNNNNGG	5 cut(s)	510, 638, 704, 797, 1697
BsmAI	GTCTC	3 cut(s)	213, 702, 986
BsmBI	CGTCTC	1 cut(s)	213
BsmFI	GGGAC	1 cut(s)	247
BsnI	GGCC	6 cut(s)	320, 338, 769, 1095, 1155, 1220
Bso31I	GGTCTC	1 cut(s)	702
BsoBI	CYCGRG	2 cut(s)	257, 1708
Bsp119I	TTCGAA	1 cut(s)	119
Bsp1286I	GDGCHC	3 cut(s)	939, 1450, 1471
Bsp143I	GATC	7 cut(s)	247, 531, 628, 1032, 1164, 1408, 1608
Bsp1720I	GCTNAGC	1 cut(s)	1245
Bsp19I	CCATGG	3 cut(s)	1134, 1221, 1422
BspANI	GGCC	6 cut(s)	320, 338, 769, 1095, 1155, 1220
BspCNI	CTCAG	1 cut(s)	833
BspFNI	CGCG	2 cut(s)	1465, 1617
BspHI	TCATGA	1 cut(s)	649
BspLI	GGNNCC	5 cut(s)	538, 763, 826, 835, 1311
BspPI	GGATC	3 cut(s)	539, 623, 1403
BspT104I	TTCGAA	1 cut(s)	119
BspT107I	GGYRCC	2 cut(s)	536, 761
BspTNI	GGTCTC	1 cut(s)	702
BsrBI	CCGCTC	1 cut(s)	798
BsrDI	GCAATG	1 cut(s)	502
BsrFI	RCCGGY	1 cut(s)	1402
BsrI	ACTGG	3 cut(s)	954, 1396, 1448
BssAI	RCCGGY	1 cut(s)	1402
BssECI	CCNNGG	5 cut(s)	829, 1134, 1221, 1422, 1667
BssMI	GATC	7 cut(s)	247, 531, 628, 1032, 1164, 1408, 1608
BssNI	GRCGYC	3 cut(s)	537, 945, 1591
BssT1I	CCWWGG	3 cut(s)	1134, 1221, 1422
Bst2UI	CCWGG	3 cut(s)	766, 1202, 1668
Bst4CI	ACNGT	6 cut(s)	132, 189, 400, 1529, 1678, 1802
Bst6I	CTCTTC	3 cut(s)	481, 587, 971
BstACI	GRCGYC	3 cut(s)	537, 945, 1591
BstAPI	GCANNNNNTGC	1 cut(s)	1733
BstBAI	YACGTR	1 cut(s)	422
BstBI	TTCGAA	1 cut(s)	119
BstC8I	GCNNGC	4 cut(s)	285, 312, 1467, 1543
BstDEI	CTNAG	3 cut(s)	820, 1245, 1435
BstDSI	CCRYGG	4 cut(s)	829, 1134, 1221, 1422
BstF5I	GGATG	5 cut(s)	80, 1156, 1167, 1483, 1824
BstFNI	CGCG	2 cut(s)	1465, 1617
BstH2I	RGCGCY	1 cut(s)	540
BstHHI	GCGC	3 cut(s)	409, 539, 1619
BstKTI	GATC	7 cut(s)	250, 534, 631, 1035, 1167, 1411, 1611
BstMAI	GTCTC	3 cut(s)	213, 702, 986
BstMBI	GATC	7 cut(s)	247, 531, 628, 1032, 1164, 1408, 1608
BstMWI	GCNNNNNNNGC	9 cut(s)	326, 335, 344, 775, 878, 1226, 1559, 1733, 1779
BstNI	CCWGG	3 cut(s)	766, 1202, 1668
BstNSI	RCATGY	2 cut(s)	616, 864
BstSCI	CCNGG	4 cut(s)	379, 764, 1200, 1666
BstSLI	GKGCMC	2 cut(s)	939, 1471
BstUI	CGCG	2 cut(s)	1465, 1617
BstV1I	GCAGC	7 cut(s)	319, 746, 749, 1006, 1546, 1549, 1706
BstV2I	GAAGAC	3 cut(s)	63, 1348, 1434
BstX2I	RGATCY	1 cut(s)	628
BstXI	CCANNNNNNTGG	1 cut(s)	910
BstYI	RGATCY	1 cut(s)	628
BsuRI	GGCC	6 cut(s)	320, 338, 769, 1095, 1155, 1220
BtgI	CCRYGG	4 cut(s)	829, 1134, 1221, 1422
BtsCI	GGATG	5 cut(s)	80, 1156, 1167, 1483, 1824
BtsI	GCAGTG	4 cut(s)	453, 496, 1000, 1789
BtsIMutI	CAGTG	6 cut(s)	396, 453, 496, 961, 1000, 1789
Cac8I	GCNNGC	4 cut(s)	285, 312, 1467, 1543
CaiI	CAGNNNCTG	1 cut(s)	740
CciI	TCATGA	1 cut(s)	649
CfoI	GCGC	3 cut(s)	409, 539, 1619
Cfr10I	RCCGGY	1 cut(s)	1402
Cfr13I	GGNCC	2 cut(s)	824, 833
CseI	GACGC	2 cut(s)	934, 1599
Csp6I	GTAC	3 cut(s)	551, 1293, 1613
CspAI	ACCGGT	1 cut(s)	1402
CspCI	CAANNNNNGTGG	2 cut(s)	625, 660
CviQI	GTAC	3 cut(s)	551, 1293, 1613
DdeI	CTNAG	3 cut(s)	820, 1245, 1435
DinI	GGCGCC	1 cut(s)	538
DpnI	GATC	7 cut(s)	249, 533, 630, 1034, 1166, 1410, 1610
DpnII	GATC	7 cut(s)	247, 531, 628, 1032, 1164, 1408, 1608
DrdI	GACNNNNNNGTC	2 cut(s)	716, 1345
DriI	GACNNNNNGTC	1 cut(s)	67
DseDI	GACNNNNNNGTC	2 cut(s)	716, 1345
EaeI	YGGCCR	4 cut(s)	318, 336, 1093, 1153
Eam1104I	CTCTTC	3 cut(s)	481, 587, 971
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	3 cut(s)	481, 587, 971
EciI	GGCGGA	1 cut(s)	159
Eco130I	CCWWGG	3 cut(s)	1134, 1221, 1422
Eco24I	GRGCYC	1 cut(s)	1450
Eco31I	GGTCTC	1 cut(s)	702
Eco32I	GATATC	2 cut(s)	1180, 1504
Eco47I	GGWCC	2 cut(s)	824, 833
Eco57I	CTGAAG	2 cut(s)	462, 568
Eco72I	CACGTG	1 cut(s)	422
Eco88I	CYCGRG	2 cut(s)	257, 1708
EcoO109I	RGGNCCY	1 cut(s)	824
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	3 cut(s)	764, 1200, 1666
EcoRV	GATATC	2 cut(s)	1180, 1504
EcoT14I	CCWWGG	3 cut(s)	1134, 1221, 1422
EcoT22I	ATGCAT	1 cut(s)	1324
EcoT38I	GRGCYC	1 cut(s)	1450
EgeI	GGCGCC	1 cut(s)	538
EheI	GGCGCC	1 cut(s)	538
ErhI	CCWWGG	3 cut(s)	1134, 1221, 1422
Esp3I	CGTCTC	1 cut(s)	213
FaqI	GGGAC	1 cut(s)	247
FauI	CCCGC	3 cut(s)	97, 1458, 1699
FokI	GGATG	5 cut(s)	67, 1143, 1154, 1490, 1811
FriOI	GRGCYC	1 cut(s)	1450
FspBI	CTAG	2 cut(s)	1061, 1472
GlaI	GCGC	3 cut(s)	408, 538, 1618
GsuI	CTGGAG	1 cut(s)	1296
HaeII	RGCGCY	1 cut(s)	540
HaeIII	GGCC	6 cut(s)	320, 338, 769, 1095, 1155, 1220
HgaI	GACGC	2 cut(s)	934, 1599
HhaI	GCGC	3 cut(s)	409, 539, 1619
Hin1I	GRCGYC	3 cut(s)	537, 945, 1591
Hin6I	GCGC	3 cut(s)	407, 537, 1617
HinP1I	GCGC	3 cut(s)	407, 537, 1617
HincII	GTYRAC	1 cut(s)	1338
HindII	GTYRAC	1 cut(s)	1338
Hpy166II	GTNNAC	3 cut(s)	937, 1338, 1441
Hpy188I	TCNGA	9 cut(s)	16, 61, 481, 505, 1258, 1351, 1793, 1807, 1859
Hpy188III	TCNNGA	8 cut(s)	586, 650, 822, 1030, 1175, 1313, 1532, 1753
Hpy8I	GTNNAC	3 cut(s)	937, 1338, 1441
Hpy99I	CGWCG	2 cut(s)	79, 1593
HpyAV	CCTTC	9 cut(s)	51, 105, 213, 229, 289, 474, 780, 1422, 1619
HpyCH4III	ACNGT	6 cut(s)	132, 189, 400, 1529, 1678, 1802
HpyCH4IV	ACGT	1 cut(s)	421
HpyCH4V	TGCA	6 cut(s)	446, 616, 937, 1083, 1150, 1322
HpyF10VI	GCNNNNNNNGC	9 cut(s)	326, 335, 344, 775, 878, 1226, 1559, 1733, 1779
HpyF3I	CTNAG	3 cut(s)	820, 1245, 1435
HpySE526I	ACGT	1 cut(s)	421
Hsp92I	GRCGYC	3 cut(s)	537, 945, 1591
HspAI	GCGC	3 cut(s)	407, 537, 1617
KasI	GGCGCC	1 cut(s)	536
Kzo9I	GATC	7 cut(s)	247, 531, 628, 1032, 1164, 1408, 1608
LmnI	GCTCC	4 cut(s)	292, 319, 382, 1315
Lsp1109I	GCAGC	7 cut(s)	319, 746, 749, 1006, 1546, 1549, 1706
LweI	GCATC	1 cut(s)	1331
MaeI	CTAG	2 cut(s)	1061, 1472
MaeII	ACGT	1 cut(s)	421
MaeIII	GTNAC	4 cut(s)	448, 863, 1481, 1574
MalI	GATC	7 cut(s)	249, 533, 630, 1034, 1166, 1410, 1610
MbiI	CCGCTC	1 cut(s)	798
MboI	GATC	7 cut(s)	247, 531, 628, 1032, 1164, 1408, 1608
MboII	GAAGA	9 cut(s)	27, 63, 168, 468, 604, 988, 1348, 1439, 1756
MfeI	CAATTG	1 cut(s)	679
MflI	RGATCY	1 cut(s)	628
MhlI	GDGCHC	3 cut(s)	939, 1450, 1471
MlsI	TGGCCA	2 cut(s)	1095, 1155
MluCI	AATT	7 cut(s)	115, 546, 679, 814, 904, 1013, 1126
MluNI	TGGCCA	2 cut(s)	1095, 1155
Mly113I	GGCGCC	1 cut(s)	537
MlyI	GAGTC	8 cut(s)	5, 56, 269, 467, 494, 988, 1377, 1802
MmeI	TCCRAC	3 cut(s)	492, 1054, 1830
Mox20I	TGGCCA	2 cut(s)	1095, 1155
Mph1103I	ATGCAT	1 cut(s)	1324
MroXI	GAANNNNTTC	1 cut(s)	1748
MscI	TGGCCA	2 cut(s)	1095, 1155
MseI	TTAA	1 cut(s)	1649
MslI	CAYNNNNRTG	3 cut(s)	572, 1149, 1817
Msp20I	TGGCCA	2 cut(s)	1095, 1155
MspA1I	CMGCKG	2 cut(s)	740, 1697
MspR9I	CCNGG	4 cut(s)	381, 766, 1202, 1668
MunI	CAATTG	1 cut(s)	679
MvaI	CCWGG	3 cut(s)	766, 1202, 1668
MvnI	CGCG	2 cut(s)	1465, 1617
MwoI	GCNNNNNNNGC	9 cut(s)	326, 335, 344, 775, 878, 1226, 1559, 1733, 1779
NarI	GGCGCC	1 cut(s)	537
NciI	CCSGG	1 cut(s)	381
NcoI	CCATGG	3 cut(s)	1134, 1221, 1422
NdeII	GATC	7 cut(s)	247, 531, 628, 1032, 1164, 1408, 1608
NlaIV	GGNNCC	5 cut(s)	538, 763, 826, 835, 1311
NmeAIII	GCCGAG	2 cut(s)	848, 1067
NmuCI	GTSAC	3 cut(s)	448, 863, 1574
NsiI	ATGCAT	1 cut(s)	1324
NspI	RCATGY	2 cut(s)	616, 864
NspV	TTCGAA	1 cut(s)	119
PagI	TCATGA	1 cut(s)	649
PciI	ACATGT	1 cut(s)	860
PcsI	WCGNNNNNNNCGW	2 cut(s)	74, 1775
PdmI	GAANNNNTTC	1 cut(s)	1748
PfeI	GAWTC	4 cut(s)	17, 32, 104, 1687
Pfl23II	CGTACG	1 cut(s)	1612
PfoI	TCCNGGA	1 cut(s)	1200
PinAI	ACCGGT	1 cut(s)	1402
PleI	GAGTC	8 cut(s)	5, 56, 268, 467, 494, 987, 1376, 1802
PluTI	GGCGCC	1 cut(s)	540
PmaCI	CACGTG	1 cut(s)	422
PmlI	CACGTG	1 cut(s)	422
PpsI	GAGTC	8 cut(s)	5, 56, 268, 467, 494, 987, 1376, 1802
Ppu21I	YACGTR	1 cut(s)	422
PpuMI	RGGWCCY	1 cut(s)	824
PscI	ACATGT	1 cut(s)	860
Psp5II	RGGWCCY	1 cut(s)	824
Psp6I	CCWGG	3 cut(s)	764, 1200, 1666
PspCI	CACGTG	1 cut(s)	422
PspGI	CCWGG	3 cut(s)	764, 1200, 1666
PspLI	CGTACG	1 cut(s)	1612
PspN4I	GGNNCC	5 cut(s)	538, 763, 826, 835, 1311
PspPI	GGNCC	2 cut(s)	824, 833
PspPPI	RGGWCCY	1 cut(s)	824
PstNI	CAGNNNCTG	1 cut(s)	740
PsuI	RGATCY	1 cut(s)	628
PvuII	CAGCTG	2 cut(s)	740, 1697
RsaI	GTAC	3 cut(s)	552, 1294, 1614
RsaNI	GTAC	3 cut(s)	551, 1293, 1613
RseI	CAYNNNNRTG	3 cut(s)	572, 1149, 1817
SaqAI	TTAA	1 cut(s)	1649
Sau3AI	GATC	7 cut(s)	247, 531, 628, 1032, 1164, 1408, 1608
Sau96I	GGNCC	2 cut(s)	824, 833
SchI	GAGTC	8 cut(s)	5, 56, 269, 467, 494, 988, 1377, 1802
ScrFI	CCNGG	4 cut(s)	381, 766, 1202, 1668
SduI	GDGCHC	3 cut(s)	939, 1450, 1471
SfaNI	GCATC	1 cut(s)	1331
SfoI	GGCGCC	1 cut(s)	538
SfuI	TTCGAA	1 cut(s)	119
SinI	GGWCC	2 cut(s)	824, 833
SmiMI	CAYNNNNRTG	3 cut(s)	572, 1149, 1817
SmlI	CTYRAG	1 cut(s)	983
SmoI	CTYRAG	1 cut(s)	983
Sse9I	AATT	7 cut(s)	115, 546, 679, 814, 904, 1013, 1126
SspDI	GGCGCC	1 cut(s)	536
SspI	AATATT	2 cut(s)	620, 1195
SspMI	CTAG	2 cut(s)	1061, 1472
StyD4I	CCNGG	4 cut(s)	379, 764, 1200, 1666
StyI	CCWWGG	3 cut(s)	1134, 1221, 1422
TaaI	ACNGT	6 cut(s)	132, 189, 400, 1529, 1678, 1802
TaiI	ACGT	1 cut(s)	424
TaqI	TCGA	5 cut(s)	119, 221, 1029, 1450, 1769
TasI	AATT	7 cut(s)	115, 546, 679, 814, 904, 1013, 1126
TatI	WGTACW	1 cut(s)	550
TauI	GCSGC	3 cut(s)	412, 875, 1846
TfiI	GAWTC	4 cut(s)	17, 32, 104, 1687
Tru1I	TTAA	1 cut(s)	1649
Tru9I	TTAA	1 cut(s)	1649
TscAI	CASTG	6 cut(s)	403, 453, 496, 961, 1000, 1789
TseFI	GTSAC	3 cut(s)	448, 863, 1574
TseI	GCWGC	7 cut(s)	307, 734, 737, 1019, 1559, 1562, 1694
Tsp45I	GTSAC	3 cut(s)	448, 863, 1574
TspDTI	ATGAA	4 cut(s)	704, 1037, 1700, 1757
TspGWI	ACGGA	2 cut(s)	846, 1736
TspRI	CASTG	6 cut(s)	403, 453, 496, 961, 1000, 1789
VneI	GTGCAC	1 cut(s)	935
VpaK11BI	GGWCC	2 cut(s)	824, 833
XapI	RAATTY	3 cut(s)	115, 814, 1013
XceI	RCATGY	2 cut(s)	616, 864
XcmI	CCANNNNNNNNNTGG	2 cut(s)	737, 1132
XmnI	GAANNNNTTC	1 cut(s)	1748
XspI	CTAG	2 cut(s)	1061, 1472
Zsp2I	ATGCAT	1 cut(s)	1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.