Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0011637

Physical Location & Seq

Genomic Coordinates Reverse (-)

8737067 .. 8740231

Gene Structure 3165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0102300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGCTTCCGATCCATTGTGGATGGGAAAGTTTCTACTAGTGTTAGTACTCTTGTCGTTCCCATTTATTCACTGTGAAAATATCACAAACACGATACAGTCCGAGTGTTTGAAGGTTCCCAACTCGGAGTTTGCCGGGTCGATTGTGAACACCATTGATGTTATGCAGCAGGTGGTGTCTATTCTTTCCAGCGTTGCTAAGGGTTTCGGGGATTTCCGGCTTTCGAATGCCATCGACGACTGTCTGGATTTGATGGATAGCTCGGCTGATGAGTTGAGCTGGACTCTCTCTGCTACCCAGAATCAGAATGGCAAACATAACAGCACTGGGAATTTGAGTTCTGATCTGAGAACATGGCTGAGTGCTACACTGTTTAACCAGGACACATGCAGTGATGGATTTGATGGCACCAACGGCATTGTCAAAGACTTGGTGTCCGGTAGCCTTGACCAAATAACTTCCTTGGTCCTAGAACTACTCGGCCAAGTGCACCCAGTTTCGGATCAGCACGAGTCAAATGGCCAAACCCCAGCATGGTTTAGATCCGAGGACCGCAAACTGCTACAAGCAAATGGAATGCCTGTAGACGTTGTGGTAGCTCAGGATGGAACCGGGAACTTCACAAATATCACCTCCGCGATTTTATCAGTACCGGATTACAGCTTGAAGCGCTACGTGATTTACGTCAAGAGAGGGGTGTACAAGGAGTATGTGGAGATCAAGAAGAAGAAATGGAACATAATGATGATCGGAGATGGCATGGATGCTACTGTAATCAGTGGGAATCACAATTATGTGGATGGTTGGACCACATTTCGCTCTGCAACTTTTGCTGTTAGTGGAAGAGGATTCATAGCGCGCGACATCACATTCGAGAACACAGCAGGACCCGAGAAACACATGGCAGTGGCGCTACGATCCGACTCAGACCTCTCGGTCTTTTACCGGTGTGAGTTTCGGGGATACCAGGACACACTATACACACACTCTATGCGCCAATTCTATCGAGACTGCAAAATCAGCGGCACTGTTGATTTCATCTTCGGTGACGGCACTGTTGTGTTCCAGAACTGCCAAATCCAAGCCAGACAAGCCTTGCCAAACCAAAAGAACAGCATCACAGCCCATGGCCGAAAGTACGTAGATGAGCCAACAGGCTTTTCGATCCAATTCTGCAACATATCTGCACATCCAGACTTGTTAGCCACCCCGGTTAACTCTAGCACACCTACTTACCTTGGTAGACCATGGAAACAATTTTCAAGAACTATAATCATGCAGTCCTTCATGAGCAATATCATAAAGCCAGAAGGGTGGCTAGAGTGGAATGGTAGCATGTTTTTGGATTCATTGTTCTATGGAGAGTACATGAATTACGGGCCTGGAGCGGGCCTCGGGAGCCGGGTTACCTGGCCAGGATATCAAAAGTTTAACGAGTCCGGGCAGGCCAAGAACTATACAGTGTCCGAGTTTATTGAAGGAAACTTGTGGTTGCCCTCTACTGGTGTCAAATATACTGCAGGCTTTGGGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019722 GO:0019932 GO:0022622 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0090351 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

511

Amino Acids

56.82

Weight (kDa)

5.44

Isoelectric Point (pI)

31.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	60 - 156	5.1e-16	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	196 - 495	5.4e-143	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18470 AT2G18470 AT2G18470 AT2G18470
fragaria_vesca	FvH4_1g13460
malus_domestica	MD02G1149900.v1.1 MD15G1264500.v1.1
prunus_persica	Prupe.7G153100_v2.0.a1 Prupe.7G153100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0101841
rosa_multiflora	Rmu_sc0000838.1_g000006
rosa_roxburghii	Rroxscaffold_2G00141000
rosa_rugosa	Rorug02G0102200 Rorug02G0102300
rosa_samantha	Rh2AG149800 Rh2BG155300 Rh2CG155700 Rh2DG155500
rosa_wichuraiana	Rw2G011720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	160
AasI	GACNNNNNNGTC	1 cut(s)	935
Acc36I	ACCTGC	1 cut(s)	160
AccB1I	GGYRCC	1 cut(s)	407
AccBSI	CCGCTC	1 cut(s)	1388
AccI	GTMKAC	2 cut(s)	585, 1243
AccII	CGCG	3 cut(s)	638, 859, 861
AciI	CCGC	4 cut(s)	553, 636, 1023, 1388
AclWI	GGATC	5 cut(s)	5, 510, 537, 912, 1159
AcoI	YGGCCR	4 cut(s)	481, 520, 1129, 1412
AcsI	RAATTY	1 cut(s)	331
AfaI	GTAC	5 cut(s)	48, 651, 701, 1139, 1367
AfeI	AGCGCT	1 cut(s)	671
AfiI	CCNNNNNNNGG	4 cut(s)	499, 534, 1388, 1502
AgeI	ACCGGT	1 cut(s)	945
AgsI	TTSAA	4 cut(s)	112, 667, 1263, 1478
AhdI	GACNNNNNGTC	1 cut(s)	433
AhlI	ACTAGT	1 cut(s)	37
AjnI	CCWGG	5 cut(s)	378, 966, 1381, 1409, 1414
AjuI	GAANNNNNNNTTGG	2 cut(s)	1144, 1176
AleI	CACNNNNGTG	1 cut(s)	1058
AloI	GAACNNNNNNTCC	4 cut(s)	322, 354, 1337, 1369
AluBI	AGCT	4 cut(s)	261, 279, 599, 663
AluI	AGCT	4 cut(s)	261, 279, 599, 663
Alw21I	GWGCWC	1 cut(s)	492
Alw26I	GTCTC	1 cut(s)	1002
Alw44I	GTGCAC	1 cut(s)	488
AlwI	GGATC	5 cut(s)	5, 510, 537, 912, 1159
Ama87I	CYCGRG	2 cut(s)	890, 1394
Aor51HI	AGCGCT	1 cut(s)	671
AoxI	GGCC	7 cut(s)	481, 520, 1129, 1379, 1390, 1412, 1446
ApaLI	GTGCAC	1 cut(s)	488
ApeKI	GCWGC	1 cut(s)	166
ApoI	RAATTY	1 cut(s)	331
ArsI	GACNNNNNNTTYG	2 cut(s)	854, 886
AsiGI	ACCGGT	1 cut(s)	945
AspLEI	GCGC	5 cut(s)	672, 859, 861, 913, 996
AspS9I	GGNCC	6 cut(s)	466, 550, 807, 887, 1379, 1390
AsuC2I	CCSGG	5 cut(s)	136, 613, 1211, 1403, 1441
AsuHPI	GGTGA	2 cut(s)	622, 1058
AsuII	TTCGAA	1 cut(s)	224
AvaI	CYCGRG	2 cut(s)	890, 1394
AvaII	GGWCC	4 cut(s)	466, 550, 807, 887
BaeGI	GKGCMC	1 cut(s)	492
BalI	TGGCCA	2 cut(s)	522, 1414
BanI	GGYRCC	1 cut(s)	407
BauI	CACGAG	1 cut(s)	509
Bbv12I	GWGCWC	1 cut(s)	492
BbvI	GCAGC	1 cut(s)	178
BccI	CCATC	8 cut(s)	16, 239, 247, 389, 398, 599, 749, 794
BceAI	ACGGC	2 cut(s)	430, 1066
BciT130I	CCWGG	5 cut(s)	380, 968, 1383, 1411, 1416
BciVI	GTATCC	1 cut(s)	956
BcnI	CCSGG	5 cut(s)	136, 613, 1211, 1403, 1441
BcoDI	GTCTC	1 cut(s)	1002
BcuI	ACTAGT	1 cut(s)	37
BfaI	CTAG	4 cut(s)	38, 470, 1221, 1319
BfmI	CTRYAG	2 cut(s)	582, 1518
BfoI	RGCGCY	2 cut(s)	673, 914
BfuAI	ACCTGC	1 cut(s)	160
BfuI	GTATCC	1 cut(s)	956
BisI	GCNGC	2 cut(s)	167, 1024
BlsI	GCNGC	2 cut(s)	168, 1025
BmcAI	AGTACT	1 cut(s)	48
Bme18I	GGWCC	4 cut(s)	466, 550, 807, 887
BmeRI	GACNNNNNGTC	1 cut(s)	433
BmeT110I	CYCGRG	2 cut(s)	890, 1394
BmgT120I	GGNCC	6 cut(s)	466, 550, 807, 887, 1379, 1390
BmiI	GGNNCC	5 cut(s)	117, 409, 610, 889, 1400
BmrI	ACTGGG	2 cut(s)	336, 488
BmsI	GCATC	2 cut(s)	754, 1125
BmuI	ACTGGG	2 cut(s)	336, 488
BoxI	GACNNNNGTC	1 cut(s)	240
BplI	GAGNNNNNCTC	4 cut(s)	268, 300, 1377, 1409
BpmI	CTGGAG	1 cut(s)	1404
Bpu10I	CCTNAGC	2 cut(s)	198, 600
Bpu14I	TTCGAA	1 cut(s)	224
BpuMI	CCSGG	5 cut(s)	136, 613, 1211, 1403, 1441
BsaAI	YACGTR	2 cut(s)	676, 1141
BsaJI	CCNNGG	7 cut(s)	462, 546, 1126, 1209, 1237, 1247, 1393
BsaWI	WCCGGW	3 cut(s)	437, 652, 945
Bsc4I	CCNNNNNNNGG	4 cut(s)	499, 534, 1388, 1502
Bse118I	RCCGGY	1 cut(s)	945
Bse1I	ACTGG	3 cut(s)	331, 494, 1507
BseBI	CCWGG	5 cut(s)	380, 968, 1383, 1411, 1416
BseDI	CCNNGG	7 cut(s)	462, 546, 1126, 1209, 1237, 1247, 1393
BseGI	GGATG	5 cut(s)	27, 610, 769, 805, 1189
BseLI	CCNNNNNNNGG	4 cut(s)	499, 534, 1388, 1502
BseMII	CTCAG	4 cut(s)	338, 350, 614, 939
BseNI	ACTGG	3 cut(s)	331, 494, 1507
BsePI	GCGCGC	1 cut(s)	857
BseSI	GKGCMC	1 cut(s)	492
BseXI	GCAGC	1 cut(s)	178
BseYI	CCCAGC	1 cut(s)	529
BsgI	GTGCAG	1 cut(s)	1170
Bsh1236I	CGCG	3 cut(s)	638, 859, 861
BshFI	GGCC	7 cut(s)	483, 522, 1131, 1381, 1392, 1414, 1448
BshNI	GGYRCC	1 cut(s)	407
BshTI	ACCGGT	1 cut(s)	945
BsiHKAI	GWGCWC	1 cut(s)	492
BsiHKCI	CYCGRG	2 cut(s)	890, 1394
BsiSI	CCGG	9 cut(s)	135, 217, 438, 612, 653, 946, 1211, 1402, 1440
BslI	CCNNNNNNNGG	4 cut(s)	499, 534, 1388, 1502
BsmAI	GTCTC	1 cut(s)	1002
BsmI	GAATGC	2 cut(s)	232, 582
BsnI	GGCC	7 cut(s)	483, 522, 1131, 1381, 1392, 1414, 1448
BsoBI	CYCGRG	2 cut(s)	890, 1394
Bsp119I	TTCGAA	1 cut(s)	224
Bsp1286I	GDGCHC	1 cut(s)	492
Bsp1407I	TGTACA	1 cut(s)	699
Bsp143I	GATC	8 cut(s)	10, 343, 502, 542, 717, 747, 917, 1164
Bsp19I	CCATGG	2 cut(s)	1126, 1247
BspACI	CCGC	4 cut(s)	553, 636, 1023, 1388
BspANI	GGCC	7 cut(s)	483, 522, 1131, 1381, 1392, 1414, 1448
BspCNI	CTCAG	4 cut(s)	339, 351, 613, 938
BspFNI	CGCG	3 cut(s)	638, 859, 861
BspHI	TCATGA	1 cut(s)	1287
BspLI	GGNNCC	5 cut(s)	117, 409, 610, 889, 1400
BspMAI	CTGCAG	1 cut(s)	1522
BspMI	ACCTGC	1 cut(s)	160
BspPI	GGATC	5 cut(s)	5, 510, 537, 912, 1159
BspT104I	TTCGAA	1 cut(s)	224
BspT107I	GGYRCC	1 cut(s)	407
BsrBI	CCGCTC	1 cut(s)	1388
BsrFI	RCCGGY	1 cut(s)	945
BsrGI	TGTACA	1 cut(s)	699
BsrI	ACTGG	3 cut(s)	331, 494, 1507
BssAI	RCCGGY	1 cut(s)	945
BssECI	CCNNGG	7 cut(s)	462, 546, 1126, 1209, 1237, 1247, 1393
BssHII	GCGCGC	1 cut(s)	857
BssMI	GATC	8 cut(s)	10, 343, 502, 542, 717, 747, 917, 1164
BssSI	CACGAG	1 cut(s)	509
BssT1I	CCWWGG	4 cut(s)	462, 1126, 1237, 1247
Bst2BI	CACGAG	1 cut(s)	509
Bst2UI	CCWGG	5 cut(s)	380, 968, 1383, 1411, 1416
Bst4CI	ACNGT	8 cut(s)	74, 99, 242, 372, 772, 1030, 1057, 1462
Bst6I	CTCTTC	1 cut(s)	838
BstAPI	GCANNNNNTGC	1 cut(s)	830
BstAUI	TGTACA	1 cut(s)	699
BstBAI	YACGTR	2 cut(s)	676, 1141
BstBI	TTCGAA	1 cut(s)	224
BstC8I	GCNNGC	4 cut(s)	859, 1390, 1446, 1522
BstDEI	CTNAG	5 cut(s)	198, 347, 359, 600, 925
BstDSI	CCRYGG	2 cut(s)	1126, 1247
BstEII	GGTNACC	1 cut(s)	1405
BstF5I	GGATG	5 cut(s)	27, 610, 769, 805, 1189
BstFNI	CGCG	3 cut(s)	638, 859, 861
BstH2I	RGCGCY	2 cut(s)	673, 914
BstHHI	GCGC	5 cut(s)	672, 859, 861, 913, 996
BstKTI	GATC	8 cut(s)	13, 346, 505, 545, 720, 750, 920, 1167
BstMAI	GTCTC	1 cut(s)	1002
BstMBI	GATC	8 cut(s)	10, 343, 502, 542, 717, 747, 917, 1164
BstMWI	GCNNNNNNNGC	6 cut(s)	414, 669, 830, 1020, 1091, 1398
BstNI	CCWGG	5 cut(s)	380, 968, 1383, 1411, 1416
BstNSI	RCATGY	2 cut(s)	390, 1339
BstPAI	GACNNNNGTC	1 cut(s)	240
BstPI	GGTNACC	1 cut(s)	1405
BstSFI	CTRYAG	2 cut(s)	582, 1518
BstSLI	GKGCMC	1 cut(s)	492
BstSNI	TACGTA	1 cut(s)	1141
BstUI	CGCG	3 cut(s)	638, 859, 861
BstV1I	GCAGC	1 cut(s)	178
BstX2I	RGATCY	1 cut(s)	542
BstXI	CCANNNNNNTGG	1 cut(s)	1314
BstYI	RGATCY	1 cut(s)	542
BsuI	GTATCC	1 cut(s)	956
BsuRI	GGCC	7 cut(s)	483, 522, 1131, 1381, 1392, 1414, 1448
BtgI	CCRYGG	2 cut(s)	1126, 1247
BtsCI	GGATG	5 cut(s)	27, 610, 769, 805, 1189
BtsI	GCAGTG	2 cut(s)	397, 912
BtsIMutI	CAGTG	9 cut(s)	70, 324, 368, 397, 784, 912, 1026, 1053, 1467
BveI	ACCTGC	1 cut(s)	160
Cac8I	GCNNGC	4 cut(s)	859, 1390, 1446, 1522
CciI	TCATGA	1 cut(s)	1287
CfoI	GCGC	5 cut(s)	672, 859, 861, 913, 996
Cfr10I	RCCGGY	1 cut(s)	945
Cfr13I	GGNCC	6 cut(s)	466, 550, 807, 887, 1379, 1390
Csp6I	GTAC	5 cut(s)	47, 650, 700, 1138, 1366
CspAI	ACCGGT	1 cut(s)	945
CviQI	GTAC	5 cut(s)	47, 650, 700, 1138, 1366
DdeI	CTNAG	5 cut(s)	198, 347, 359, 600, 925
DpnI	GATC	8 cut(s)	12, 345, 504, 544, 719, 749, 919, 1166
DpnII	GATC	8 cut(s)	10, 343, 502, 542, 717, 747, 917, 1164
DrdI	GACNNNNNNGTC	1 cut(s)	935
DriI	GACNNNNNGTC	1 cut(s)	433
DseDI	GACNNNNNNGTC	1 cut(s)	935
EaeI	YGGCCR	4 cut(s)	481, 520, 1129, 1412
Eam1104I	CTCTTC	1 cut(s)	838
Eam1105I	GACNNNNNGTC	1 cut(s)	433
EarI	CTCTTC	1 cut(s)	838
Eco105I	TACGTA	1 cut(s)	1141
Eco130I	CCWWGG	4 cut(s)	462, 1126, 1237, 1247
Eco32I	GATATC	1 cut(s)	1421
Eco47I	GGWCC	4 cut(s)	466, 550, 807, 887
Eco47III	AGCGCT	1 cut(s)	671
Eco88I	CYCGRG	2 cut(s)	890, 1394
Eco91I	GGTNACC	1 cut(s)	1405
EcoO109I	RGGNCCY	1 cut(s)	887
EcoO65I	GGTNACC	1 cut(s)	1405
EcoRII	CCWGG	5 cut(s)	378, 966, 1381, 1409, 1414
EcoRV	GATATC	1 cut(s)	1421
EcoT14I	CCWWGG	4 cut(s)	462, 1126, 1237, 1247
ErhI	CCWWGG	4 cut(s)	462, 1126, 1237, 1247
FauI	CCCGC	1 cut(s)	1381
FblI	GTMKAC	2 cut(s)	585, 1243
Fnu4HI	GCNGC	2 cut(s)	167, 1024
FokI	GGATG	5 cut(s)	34, 617, 776, 812, 1176
Fsp4HI	GCNGC	2 cut(s)	167, 1024
FspBI	CTAG	4 cut(s)	38, 470, 1221, 1319
GlaI	GCGC	5 cut(s)	671, 858, 860, 912, 995
GluI	GCNGC	2 cut(s)	167, 1024
GsaI	CCCAGC	1 cut(s)	533
GsuI	CTGGAG	1 cut(s)	1404
HaeII	RGCGCY	2 cut(s)	673, 914
HaeIII	GGCC	7 cut(s)	483, 522, 1131, 1381, 1392, 1414, 1448
HapII	CCGG	9 cut(s)	135, 217, 438, 612, 653, 946, 1211, 1402, 1440
HhaI	GCGC	5 cut(s)	672, 859, 861, 913, 996
Hin6I	GCGC	5 cut(s)	670, 857, 859, 911, 994
HinP1I	GCGC	5 cut(s)	670, 857, 859, 911, 994
HincII	GTYRAC	1 cut(s)	1216
HindII	GTYRAC	1 cut(s)	1216
HinfI	GANTC	8 cut(s)	283, 301, 512, 784, 849, 923, 1346, 1436
HpaI	GTTAAC	1 cut(s)	1216
HpaII	CCGG	9 cut(s)	135, 217, 438, 612, 653, 946, 1211, 1402, 1440
HphI	GGTGA	2 cut(s)	622, 1058
Hpy166II	GTNNAC	6 cut(s)	148, 490, 586, 700, 1216, 1244
Hpy8I	GTNNAC	6 cut(s)	148, 490, 586, 700, 1216, 1244
Hpy99I	CGWCG	1 cut(s)	239
HpyAV	CCTTC	4 cut(s)	106, 1294, 1304, 1472
HpyCH4III	ACNGT	8 cut(s)	74, 99, 242, 372, 772, 1030, 1057, 1462
HpyCH4IV	ACGT	4 cut(s)	588, 675, 684, 1140
HpyCH4V	TGCA	9 cut(s)	166, 390, 490, 824, 1014, 1176, 1187, 1279, 1520
HpyF10VI	GCNNNNNNNGC	6 cut(s)	414, 669, 830, 1020, 1091, 1398
HpyF3I	CTNAG	5 cut(s)	198, 347, 359, 600, 925
HpySE526I	ACGT	4 cut(s)	588, 675, 684, 1140
HspAI	GCGC	5 cut(s)	670, 857, 859, 911, 994
KspAI	GTTAAC	1 cut(s)	1216
Kzo9I	GATC	8 cut(s)	10, 343, 502, 542, 717, 747, 917, 1164
LmnI	GCTCC	2 cut(s)	1385, 1398
Lsp1109I	GCAGC	1 cut(s)	178
LweI	GCATC	2 cut(s)	754, 1125
MaeI	CTAG	4 cut(s)	38, 470, 1221, 1319
MaeII	ACGT	4 cut(s)	588, 675, 684, 1140
MaeIII	GTNAC	2 cut(s)	1046, 1405
MalI	GATC	8 cut(s)	12, 345, 504, 544, 719, 749, 919, 1166
MbiI	CCGCTC	1 cut(s)	1388
MboI	GATC	8 cut(s)	10, 343, 502, 542, 717, 747, 917, 1164
MboII	GAAGA	4 cut(s)	736, 739, 855, 1033
MflI	RGATCY	1 cut(s)	542
MhlI	GDGCHC	1 cut(s)	492
MlsI	TGGCCA	2 cut(s)	522, 1414
MluCI	AATT	6 cut(s)	331, 790, 998, 1169, 1256, 1372
MluNI	TGGCCA	2 cut(s)	522, 1414
MlyI	GAGTC	4 cut(s)	277, 521, 917, 1445
MmeI	TCCRAC	2 cut(s)	785, 945
MnlI	CCTC	7 cut(s)	541, 643, 686, 839, 941, 1403, 1507
Mox20I	TGGCCA	2 cut(s)	522, 1414
MscI	TGGCCA	2 cut(s)	522, 1414
MseI	TTAA	4 cut(s)	375, 1215, 1431, 1534
MslI	CAYNNNNRTG	4 cut(s)	743, 792, 905, 1058
Msp20I	TGGCCA	2 cut(s)	522, 1414
MspA1I	CMGCKG	1 cut(s)	1023
MspI	CCGG	9 cut(s)	135, 217, 438, 612, 653, 946, 1211, 1402, 1440
Mva1269I	GAATGC	2 cut(s)	232, 582
MvaI	CCWGG	5 cut(s)	380, 968, 1383, 1411, 1416
MvnI	CGCG	3 cut(s)	638, 859, 861
MwoI	GCNNNNNNNGC	6 cut(s)	414, 669, 830, 1020, 1091, 1398
NciI	CCSGG	5 cut(s)	136, 613, 1211, 1403, 1441
NcoI	CCATGG	2 cut(s)	1126, 1247
NdeII	GATC	8 cut(s)	10, 343, 502, 542, 717, 747, 917, 1164
NlaIV	GGNNCC	5 cut(s)	117, 409, 610, 889, 1400
NmeAIII	GCCGAG	2 cut(s)	242, 459
NmuCI	GTSAC	1 cut(s)	1046
NspI	RCATGY	2 cut(s)	390, 1339
NspV	TTCGAA	1 cut(s)	224
OliI	CACNNNNGTG	1 cut(s)	1058
PagI	TCATGA	1 cut(s)	1287
PaqCI	CACCTGC	1 cut(s)	160
PauI	GCGCGC	1 cut(s)	857
PcsI	WCGNNNNNNNCGW	1 cut(s)	681
PctI	GAATGC	2 cut(s)	232, 582
PfeI	GAWTC	4 cut(s)	301, 784, 849, 1346
PinAI	ACCGGT	1 cut(s)	945
PkrI	GCNGC	2 cut(s)	168, 1025
PleI	GAGTC	4 cut(s)	277, 520, 917, 1444
PpsI	GAGTC	4 cut(s)	277, 520, 917, 1444
Ppu21I	YACGTR	2 cut(s)	676, 1141
PpuMI	RGGWCCY	1 cut(s)	887
PshAI	GACNNNNGTC	1 cut(s)	240
Psp5II	RGGWCCY	1 cut(s)	887
Psp6I	CCWGG	5 cut(s)	378, 966, 1381, 1409, 1414
PspEI	GGTNACC	1 cut(s)	1405
PspFI	CCCAGC	1 cut(s)	529
PspGI	CCWGG	5 cut(s)	378, 966, 1381, 1409, 1414
PspN4I	GGNNCC	5 cut(s)	117, 409, 610, 889, 1400
PspPI	GGNCC	6 cut(s)	466, 550, 807, 887, 1379, 1390
PspPPI	RGGWCCY	1 cut(s)	887
PstI	CTGCAG	1 cut(s)	1522
PsuI	RGATCY	1 cut(s)	542
PteI	GCGCGC	1 cut(s)	857
RsaI	GTAC	5 cut(s)	48, 651, 701, 1139, 1367
RsaNI	GTAC	5 cut(s)	47, 650, 700, 1138, 1366
RseI	CAYNNNNRTG	4 cut(s)	743, 792, 905, 1058
SaqAI	TTAA	4 cut(s)	375, 1215, 1431, 1534
SatI	GCNGC	2 cut(s)	167, 1024
Sau3AI	GATC	8 cut(s)	10, 343, 502, 542, 717, 747, 917, 1164
Sau96I	GGNCC	6 cut(s)	466, 550, 807, 887, 1379, 1390
ScaI	AGTACT	1 cut(s)	48
SchI	GAGTC	4 cut(s)	277, 521, 917, 1445
SduI	GDGCHC	1 cut(s)	492
SfaNI	GCATC	2 cut(s)	754, 1125
SfcI	CTRYAG	2 cut(s)	582, 1518
SfuI	TTCGAA	1 cut(s)	224
SinI	GGWCC	4 cut(s)	466, 550, 807, 887
SmiMI	CAYNNNNRTG	4 cut(s)	743, 792, 905, 1058
SnaBI	TACGTA	1 cut(s)	1141
SpeI	ACTAGT	1 cut(s)	37
Sse9I	AATT	6 cut(s)	331, 790, 998, 1169, 1256, 1372
SsiI	CCGC	4 cut(s)	553, 636, 1023, 1388
SspMI	CTAG	4 cut(s)	38, 470, 1221, 1319
StyI	CCWWGG	4 cut(s)	462, 1126, 1237, 1247
TaaI	ACNGT	8 cut(s)	74, 99, 242, 372, 772, 1030, 1057, 1462
TaiI	ACGT	4 cut(s)	591, 678, 687, 1143
TaqI	TCGA	6 cut(s)	140, 224, 234, 873, 1006, 1163
TaqII	GACCGA	1 cut(s)	925
TasI	AATT	6 cut(s)	331, 790, 998, 1169, 1256, 1372
TatI	WGTACW	3 cut(s)	46, 699, 1365
TauI	GCSGC	1 cut(s)	1026
TfiI	GAWTC	4 cut(s)	301, 784, 849, 1346
Tru1I	TTAA	4 cut(s)	375, 1215, 1431, 1534
Tru9I	TTAA	4 cut(s)	375, 1215, 1431, 1534
TscAI	CASTG	9 cut(s)	77, 331, 375, 397, 784, 912, 1033, 1060, 1467
TseFI	GTSAC	1 cut(s)	1046
TseI	GCWGC	1 cut(s)	166
Tsp45I	GTSAC	1 cut(s)	1046
TspDTI	ATGAA	5 cut(s)	841, 1027, 1276, 1338, 1385
TspRI	CASTG	9 cut(s)	77, 331, 375, 397, 784, 912, 1033, 1060, 1467
VneI	GTGCAC	1 cut(s)	488
VpaK11BI	GGWCC	4 cut(s)	466, 550, 807, 887
XapI	RAATTY	1 cut(s)	331
XceI	RCATGY	2 cut(s)	390, 1339
XcmI	CCANNNNNNNNNTGG	1 cut(s)	305
XmiI	GTMKAC	2 cut(s)	585, 1243
XspI	CTAG	4 cut(s)	38, 470, 1221, 1319
ZrmI	AGTACT	1 cut(s)	48

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.