Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0011637

Physical Location & Seq

Genomic Coordinates Reverse (-)

8719254 .. 8721276

Gene Structure 2023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0102200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGCATTCCAGGATTTCGACCAGATAACTGAGCGCCGAAAGACCGAGAATGCCCGTAAGCTCAAGAGGAGGATTATCATCGCAGTTGTTGCAGTCATCCTCCTTGTTGGAATTATCGTTGCAGCCATAGTGATTGTGAACAAAATGAAGACGGACAAGGCAACCGAAAAAGCTAGCAAACCTGCTCCAGCACCACCAAAGCCCACGGAAGATCCACCCACCCAAGATCCAACCAAGAATGAGACATCAACTTCTAGCAAGATTGTACAGCAGATGTGCGGATCAACTGATTACAAGGACAGGTGCAAGGAAGTCTTCAAAAATACAAAGGACCCCATCTCTAAACCCAAAGAAGTCATCAAGACCGCCATCTCTGGAGCCTCGGATGAGGCCAAGAGTGCCTTTACCAAAGCCAGCGAGCTCACTTTTGACAAAGAGGAAGACAAGGAAGCCTTTGAGGATTGCAAGGCACTATTTGACAATGCCAAGGAAGAATTAGAAGAATCCGTGGATCAAGTTGGCAACAGTACCACTTCTGGGAAAATGAGAACCGGTGTCTTGAACAGTTGGTTGAGTGCGGTCATATCATACCAGCAAACATGCATTGATGGGTTTCCTGATGGAGATGTGAAGTCCAAAATGACAGAGACCTTGGAGGCCACCAAGGAGCTCACTAGCAATTCCCTTGCCATGATTTCACTACTTTCCGAATTAAAGGTACCTGGCAGTGGAGGATCATCAGGTTCATCACGTCGTCTTCTGGCACAGGACAAGGATGGCTTTCCTTCCTGGCTGACCCATGAGGAGCGACGGGTGTTGAAGAAAAACGATGAAAAGCCCACACCCAATGTCACCGTGGCGAAAGATGGCAGTGGGAACTACAAATCCATTAGTGAAGCATTGTCGGCCATGCCTGAAAAATACGAAGGAAGGTATATCATCTATGTTAAAGAAGGAGTCTATGATGAGACTGTGAATGTGACAAAGAAGATGCCAAATCTCACCATATATGGTGATGGATCACAGAAGAGCATCATCACTGGGAATAAGAACAATGCAGACGGAGTTAAGCTGTTCAACACTGCAACTTTTGTGGCCTTAGGAGAAGGTTTCATTGCAAAGTCCATGGGATTCAGAAACACAGCTGGTCGTGAAAAGCAACAGGCAGTGGCAGCCAGAGTCCTAGGAGACCGTGCTATTTTCCTCAACTGCCGATTTGAAGGGTACCAAAACACATTATTTGTACAGGCTCATCGGCAATTCTATAAAAGCTGTGTTGTTTCCGGCACCGTTGATTTTATCTTCGGTGATGCTGCTGCTACCTTCCAGAACTGCATAATTTATATCCGGAAACCTAAGGAAAACCAACAGAACATAGTTACAGCCCAAGGAAGAACCGACAAACGTGAAACCACGGGAATAGTGTTGCACAATTGCAAAATCTTACCGGACAAAGAATTTGAGTCTGAGAAATCCCAATTCAAGAGTTACCTTGGGAGGCCGTGGAAGGAGTACTCAAGAACCATAGTGATGGAGTCTACAATAGAGGATGTGATTGACCAAGATGGATGGGCTGAAATGGATGGAGACTTTGGAACAAAGACTCTATTTTATGGTGAGTATAACAACAACGGACCCAGGTCCAATACTGATAACAGAGTGAAATGGCCTGGCTACAAGGTCCTTAATAAGGATGAGGCTATGGCTTTTACTATAGGTCCTTTCTTGAAAGGGAATGCTTGGCTCAAGAATCTCAATGGTGTTCCTGTTCGATTTGGCTTATTTGGTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019722 GO:0019932 GO:0022622 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0090351 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

597

Amino Acids

66.29

Weight (kDa)

8.59

Isoelectric Point (pI)

32.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	88 - 231	7.3e-30	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	283 - 579	1.6e-130	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18470 AT2G18470 AT2G18470 AT2G18470
fragaria_vesca	FvH4_1g13460
malus_domestica	MD02G1149900.v1.1 MD15G1264500.v1.1
prunus_persica	Prupe.7G153100_v2.0.a1 Prupe.7G153100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0101841
rosa_multiflora	Rmu_sc0000838.1_g000006
rosa_roxburghii	Rroxscaffold_2G00141000
rosa_rugosa	Rorug02G0102200 Rorug02G0102300
rosa_samantha	Rh2AG149800 Rh2BG155300 Rh2CG155700 Rh2DG155500
rosa_wichuraiana	Rw2G011720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	190
Acc65I	GGTACC	2 cut(s)	718, 1224
AccB1I	GGYRCC	3 cut(s)	718, 1224, 1286
AccI	GTMKAC	1 cut(s)	1538
AccIII	TCCGGA	1 cut(s)	1347
AciI	CCGC	3 cut(s)	279, 366, 578
AclWI	GGATC	6 cut(s)	206, 221, 289, 519, 742, 1027
AcoI	YGGCCR	1 cut(s)	906
AcsI	RAATTY	1 cut(s)	1457
AfaI	GTAC	6 cut(s)	267, 529, 720, 1226, 1245, 1514
AfiI	CCNNNNNNNGG	3 cut(s)	537, 728, 1690
AgeI	ACCGGT	1 cut(s)	551
AgsI	TTSAA	7 cut(s)	319, 562, 820, 1078, 1220, 1483, 1729
AjiI	CACGTC	1 cut(s)	752
AjnI	CCWGG	5 cut(s)	9, 721, 788, 1637, 1669
AloI	GAACNNNNNNTCC	2 cut(s)	869, 901
AluBI	AGCT	7 cut(s)	61, 173, 421, 670, 1072, 1145, 1272
AluI	AGCT	7 cut(s)	61, 173, 421, 670, 1072, 1145, 1272
Alw21I	GWGCWC	2 cut(s)	423, 672
Alw26I	GTCTC	5 cut(s)	236, 641, 962, 1182, 1581
AlwI	GGATC	6 cut(s)	206, 221, 289, 519, 742, 1027
Aor13HI	TCCGGA	1 cut(s)	1347
AoxI	GGCC	6 cut(s)	390, 657, 906, 1095, 1499, 1667
ApeKI	GCWGC	4 cut(s)	122, 1172, 1313, 1316
ApoI	RAATTY	1 cut(s)	1457
ArsI	GACNNNNNNTTYG	2 cut(s)	1442, 1474
AsiGI	ACCGGT	1 cut(s)	551
Asp718I	GGTACC	2 cut(s)	718, 1224
AspA2I	CCTAGG	1 cut(s)	1183
AspLEI	GCGC	1 cut(s)	36
AspS9I	GGNCC	5 cut(s)	331, 1634, 1641, 1681, 1718
AsuHPI	GGTGA	5 cut(s)	844, 994, 1025, 1319, 1628
AsuNHI	GCTAGC	1 cut(s)	173
AvaII	GGWCC	5 cut(s)	331, 1634, 1641, 1681, 1718
AvrII	CCTAGG	1 cut(s)	1183
AxyI	CCTNAGG	2 cut(s)	1099, 1356
BanI	GGYRCC	3 cut(s)	718, 1224, 1286
BanII	GRGCYC	2 cut(s)	423, 672
BbsI	GAAGAC	4 cut(s)	155, 307, 447, 749
Bbv12I	GWGCWC	2 cut(s)	423, 672
BbvI	GCAGC	4 cut(s)	134, 1184, 1300, 1303
BceAI	ACGGC	1 cut(s)	1486
BciT130I	CCWGG	5 cut(s)	11, 723, 790, 1639, 1671
BcoDI	GTCTC	5 cut(s)	236, 641, 962, 1182, 1581
BfaI	CTAG	5 cut(s)	174, 255, 675, 1184, 1792
BfmI	CTRYAG	1 cut(s)	1713
BfoI	RGCGCY	1 cut(s)	37
BfuAI	ACCTGC	1 cut(s)	190
BisI	GCNGC	4 cut(s)	123, 1173, 1314, 1317
BlnI	CCTAGG	1 cut(s)	1183
BlsI	GCNGC	4 cut(s)	124, 1174, 1315, 1318
BmcAI	AGTACT	1 cut(s)	1514
Bme1390I	CCNGG	5 cut(s)	11, 723, 790, 1639, 1671
Bme18I	GGWCC	5 cut(s)	331, 1634, 1641, 1681, 1718
BmgBI	CACGTC	1 cut(s)	752
BmgT120I	GGNCC	5 cut(s)	331, 1634, 1641, 1681, 1718
BmiI	GGNNCC	6 cut(s)	333, 379, 720, 1226, 1288, 1636
BmrFI	CCNGG	5 cut(s)	11, 723, 790, 1639, 1671
BmrI	ACTGGG	1 cut(s)	1050
BmsI	GCATC	3 cut(s)	981, 1041, 1300
BmtI	GCTAGC	1 cut(s)	177
BmuI	ACTGGG	1 cut(s)	1050
BoxI	GACNNNNGTC	1 cut(s)	1639
BpiI	GAAGAC	4 cut(s)	155, 307, 447, 749
BpmI	CTGGAG	2 cut(s)	171, 396
BpuEI	CTTGAG	3 cut(s)	47, 1501, 1730
BsaBI	GATNNNNATC	1 cut(s)	77
BsaI	GGTCTC	2 cut(s)	641, 1182
BsaWI	WCCGGW	3 cut(s)	551, 1347, 1447
Bsc4I	CCNNNNNNNGG	3 cut(s)	537, 728, 1690
Bse118I	RCCGGY	1 cut(s)	551
Bse1I	ACTGG	1 cut(s)	1045
Bse21I	CCTNAGG	2 cut(s)	1099, 1356
Bse3DI	GCAATG	1 cut(s)	1113
Bse8I	GATNNNNATC	1 cut(s)	77
BseAI	TCCGGA	1 cut(s)	1347
BseBI	CCWGG	5 cut(s)	11, 723, 790, 1639, 1671
BseGI	GGATG	7 cut(s)	96, 391, 781, 1555, 1574, 1588, 1699
BseJI	GATNNNNATC	1 cut(s)	77
BseLI	CCNNNNNNNGG	3 cut(s)	537, 728, 1690
BseMI	GCAATG	1 cut(s)	1113
BseMII	CTCAG	2 cut(s)	21, 1458
BseNI	ACTGG	1 cut(s)	1045
BseRI	GAGGAG	2 cut(s)	82, 818
BseXI	GCAGC	4 cut(s)	134, 1184, 1300, 1303
BshFI	GGCC	6 cut(s)	392, 659, 908, 1097, 1501, 1669
BshNI	GGYRCC	3 cut(s)	718, 1224, 1286
BshTI	ACCGGT	1 cut(s)	551
BsiHKAI	GWGCWC	2 cut(s)	423, 672
BsiSI	CCGG	4 cut(s)	552, 1284, 1348, 1448
BslI	CCNNNNNNNGG	3 cut(s)	537, 728, 1690
BsmAI	GTCTC	5 cut(s)	236, 641, 962, 1182, 1581
BsmI	GAATGC	3 cut(s)	5, 55, 1741
BsnI	GGCC	6 cut(s)	392, 659, 908, 1097, 1501, 1669
Bso31I	GGTCTC	2 cut(s)	641, 1182
Bsp1286I	GDGCHC	2 cut(s)	423, 672
Bsp13I	TCCGGA	1 cut(s)	1347
Bsp1407I	TGTACA	2 cut(s)	265, 1243
Bsp143I	GATC	6 cut(s)	211, 226, 281, 511, 734, 1019
Bsp19I	CCATGG	1 cut(s)	1125
BspACI	CCGC	3 cut(s)	279, 366, 578
BspANI	GGCC	6 cut(s)	392, 659, 908, 1097, 1501, 1669
BspCNI	CTCAG	2 cut(s)	22, 1459
BspEI	TCCGGA	1 cut(s)	1347
BspLI	GGNNCC	6 cut(s)	333, 379, 720, 1226, 1288, 1636
BspMI	ACCTGC	1 cut(s)	190
BspOI	GCTAGC	1 cut(s)	177
BspPI	GGATC	6 cut(s)	206, 221, 289, 519, 742, 1027
BspQI	GCTCTTC	1 cut(s)	1022
BspT107I	GGYRCC	3 cut(s)	718, 1224, 1286
BspTNI	GGTCTC	2 cut(s)	641, 1182
BsrDI	GCAATG	1 cut(s)	1113
BsrFI	RCCGGY	1 cut(s)	551
BsrGI	TGTACA	2 cut(s)	265, 1243
BsrI	ACTGG	1 cut(s)	1045
BssAI	RCCGGY	1 cut(s)	551
BssMI	GATC	6 cut(s)	211, 226, 281, 511, 734, 1019
BssT1I	CCWWGG	7 cut(s)	486, 651, 663, 1125, 1183, 1387, 1492
Bst2UI	CCWGG	5 cut(s)	11, 723, 790, 1639, 1671
Bst4CI	ACNGT	6 cut(s)	527, 566, 856, 973, 1193, 1291
Bst6I	CTCTTC	1 cut(s)	1022
BstAPI	GCANNNNNTGC	1 cut(s)	89
BstAUI	TGTACA	2 cut(s)	265, 1243
BstC8I	GCNNGC	3 cut(s)	175, 415, 419
BstDEI	CTNAG	4 cut(s)	30, 1099, 1356, 1467
BstDSI	CCRYGG	6 cut(s)	204, 507, 855, 1125, 1413, 1502
BstENI	CCTNNNNNAGG	1 cut(s)	1688
BstF5I	GGATG	7 cut(s)	96, 391, 781, 1555, 1574, 1588, 1699
BstH2I	RGCGCY	1 cut(s)	37
BstHHI	GCGC	1 cut(s)	36
BstKTI	GATC	6 cut(s)	214, 229, 284, 514, 737, 1022
BstMAI	GTCTC	5 cut(s)	236, 641, 962, 1182, 1581
BstMBI	GATC	6 cut(s)	211, 226, 281, 511, 734, 1019
BstMWI	GCNNNNNNNGC	4 cut(s)	89, 398, 905, 1172
BstNI	CCWGG	5 cut(s)	11, 723, 790, 1639, 1671
BstNSI	RCATGY	1 cut(s)	603
BstPAI	GACNNNNGTC	1 cut(s)	1639
BstSCI	CCNGG	5 cut(s)	9, 721, 788, 1637, 1669
BstSFI	CTRYAG	1 cut(s)	1713
BstV1I	GCAGC	4 cut(s)	134, 1184, 1300, 1303
BstV2I	GAAGAC	4 cut(s)	155, 307, 447, 749
BstX2I	RGATCY	2 cut(s)	211, 226
BstXI	CCANNNNNNTGG	1 cut(s)	1531
BstYI	RGATCY	2 cut(s)	211, 226
Bsu36I	CCTNAGG	2 cut(s)	1099, 1356
BsuRI	GGCC	6 cut(s)	392, 659, 908, 1097, 1501, 1669
BtgI	CCRYGG	6 cut(s)	204, 507, 855, 1125, 1413, 1502
BtgZI	GCGATG	1 cut(s)	64
BtrI	CACGTC	1 cut(s)	752
BtsCI	GGATG	7 cut(s)	96, 391, 781, 1555, 1574, 1588, 1699
BtsI	GCAGTG	4 cut(s)	733, 877, 1080, 1173
BtsIMutI	CAGTG	5 cut(s)	733, 877, 1038, 1080, 1173
BveI	ACCTGC	1 cut(s)	190
Cac8I	GCNNGC	3 cut(s)	175, 415, 419
CfoI	GCGC	1 cut(s)	36
Cfr10I	RCCGGY	1 cut(s)	551
Cfr13I	GGNCC	5 cut(s)	331, 1634, 1641, 1681, 1718
Csp6I	GTAC	6 cut(s)	266, 528, 719, 1225, 1244, 1513
CspAI	ACCGGT	1 cut(s)	551
CspCI	CAANNNNNGTGG	2 cut(s)	1074, 1109
CviAII	CATG	5 cut(s)	600, 691, 800, 910, 1126
CviQI	GTAC	6 cut(s)	266, 528, 719, 1225, 1244, 1513
DdeI	CTNAG	4 cut(s)	30, 1099, 1356, 1467
DpnI	GATC	6 cut(s)	213, 228, 283, 513, 736, 1021
DpnII	GATC	6 cut(s)	211, 226, 281, 511, 734, 1019
EaeI	YGGCCR	1 cut(s)	906
Eam1104I	CTCTTC	1 cut(s)	1022
EarI	CTCTTC	1 cut(s)	1022
Ecl136II	GAGCTC	2 cut(s)	421, 670
Eco130I	CCWWGG	7 cut(s)	486, 651, 663, 1125, 1183, 1387, 1492
Eco24I	GRGCYC	2 cut(s)	423, 672
Eco31I	GGTCTC	2 cut(s)	641, 1182
Eco47I	GGWCC	5 cut(s)	331, 1634, 1641, 1681, 1718
Eco53kI	GAGCTC	2 cut(s)	421, 670
Eco81I	CCTNAGG	2 cut(s)	1099, 1356
EcoICRI	GAGCTC	2 cut(s)	421, 670
EcoNI	CCTNNNNNAGG	1 cut(s)	1688
EcoO109I	RGGNCCY	3 cut(s)	331, 1681, 1718
EcoRII	CCWGG	5 cut(s)	9, 721, 788, 1637, 1669
EcoT14I	CCWWGG	7 cut(s)	486, 651, 663, 1125, 1183, 1387, 1492
EcoT22I	ATGCAT	1 cut(s)	605
EcoT38I	GRGCYC	2 cut(s)	423, 672
ErhI	CCWWGG	7 cut(s)	486, 651, 663, 1125, 1183, 1387, 1492
FaeI	CATG	5 cut(s)	603, 694, 803, 913, 1129
FalI	AAGNNNNNCTT	8 cut(s)	299, 331, 386, 418, 437, 469, 764, 796
FatI	CATG	5 cut(s)	599, 690, 799, 909, 1125
FblI	GTMKAC	1 cut(s)	1538
Fnu4HI	GCNGC	4 cut(s)	123, 1173, 1314, 1317
FokI	GGATG	7 cut(s)	83, 398, 788, 1562, 1581, 1595, 1706
FriOI	GRGCYC	2 cut(s)	423, 672
Fsp4HI	GCNGC	4 cut(s)	123, 1173, 1314, 1317
FspBI	CTAG	5 cut(s)	174, 255, 675, 1184, 1792
GlaI	GCGC	1 cut(s)	35
GluI	GCNGC	4 cut(s)	123, 1173, 1314, 1317
GsuI	CTGGAG	2 cut(s)	171, 396
HaeII	RGCGCY	1 cut(s)	37
HaeIII	GGCC	6 cut(s)	392, 659, 908, 1097, 1501, 1669
HapII	CCGG	4 cut(s)	552, 1284, 1348, 1448
HhaI	GCGC	1 cut(s)	36
Hin1II	CATG	5 cut(s)	603, 694, 803, 913, 1129
Hin6I	GCGC	1 cut(s)	34
HinP1I	GCGC	1 cut(s)	34
HinfI	GANTC	8 cut(s)	503, 957, 1131, 1179, 1463, 1535, 1603, 1750
HpaII	CCGG	4 cut(s)	552, 1284, 1348, 1448
HphI	GGTGA	5 cut(s)	844, 994, 1025, 1319, 1628
Hpy166II	GTNNAC	2 cut(s)	139, 1539
Hpy188I	TCNGA	4 cut(s)	385, 709, 1136, 1468
Hpy8I	GTNNAC	2 cut(s)	139, 1539
Hpy99I	CGWCG	2 cut(s)	756, 813
HpyAV	CCTTC	8 cut(s)	795, 920, 924, 947, 1100, 1214, 1333, 1501
HpyCH4III	ACNGT	6 cut(s)	527, 566, 856, 973, 1193, 1291
HpyCH4IV	ACGT	2 cut(s)	751, 1405
HpyF10VI	GCNNNNNNNGC	4 cut(s)	89, 398, 905, 1172
HpyF3I	CTNAG	4 cut(s)	30, 1099, 1356, 1467
HpySE526I	ACGT	2 cut(s)	751, 1405
Hsp92II	CATG	5 cut(s)	603, 694, 803, 913, 1129
HspAI	GCGC	1 cut(s)	34
Kpn2I	TCCGGA	1 cut(s)	1347
KpnI	GGTACC	2 cut(s)	722, 1228
Kzo9I	GATC	6 cut(s)	211, 226, 281, 511, 734, 1019
LguI	GCTCTTC	1 cut(s)	1022
LmnI	GCTCC	4 cut(s)	190, 377, 667, 805
Lsp1109I	GCAGC	4 cut(s)	134, 1184, 1300, 1303
LweI	GCATC	3 cut(s)	981, 1041, 1300
MaeI	CTAG	5 cut(s)	174, 255, 675, 1184, 1792
MaeII	ACGT	2 cut(s)	751, 1405
MaeIII	GTNAC	5 cut(s)	850, 979, 1378, 1487, 1787
MalI	GATC	6 cut(s)	213, 228, 283, 513, 736, 1021
MboI	GATC	6 cut(s)	211, 226, 281, 511, 734, 1019
MfeI	CAATTG	1 cut(s)	1432
MflI	RGATCY	2 cut(s)	211, 226
MhlI	GDGCHC	2 cut(s)	423, 672
MluCI	AATT	9 cut(s)	111, 494, 679, 710, 1259, 1338, 1432, 1457, 1478
MlyI	GAGTC	5 cut(s)	966, 1188, 1472, 1544, 1597
MmeI	TCCRAC	2 cut(s)	88, 254
Mph1103I	ATGCAT	1 cut(s)	605
MroI	TCCGGA	1 cut(s)	1347
MseI	TTAA	4 cut(s)	713, 948, 1068, 1686
MslI	CAYNNNNRTG	1 cut(s)	1529
MspA1I	CMGCKG	1 cut(s)	1145
MspI	CCGG	4 cut(s)	552, 1284, 1348, 1448
MspR9I	CCNGG	5 cut(s)	11, 723, 790, 1639, 1671
MunI	CAATTG	1 cut(s)	1432
Mva1269I	GAATGC	3 cut(s)	5, 55, 1741
MvaI	CCWGG	5 cut(s)	11, 723, 790, 1639, 1671
MwoI	GCNNNNNNNGC	4 cut(s)	89, 398, 905, 1172
NcoI	CCATGG	1 cut(s)	1125
NdeII	GATC	6 cut(s)	211, 226, 281, 511, 734, 1019
NheI	GCTAGC	1 cut(s)	173
NlaIII	CATG	5 cut(s)	603, 694, 803, 913, 1129
NlaIV	GGNNCC	6 cut(s)	333, 379, 720, 1226, 1288, 1636
NmuCI	GTSAC	2 cut(s)	850, 979
NsiI	ATGCAT	1 cut(s)	605
NspI	RCATGY	1 cut(s)	603
PciSI	GCTCTTC	1 cut(s)	1022
PctI	GAATGC	3 cut(s)	5, 55, 1741
PfeI	GAWTC	3 cut(s)	503, 1131, 1750
PfoI	TCCNGGA	1 cut(s)	9
PinAI	ACCGGT	1 cut(s)	551
PkrI	GCNGC	4 cut(s)	124, 1174, 1315, 1318
PleI	GAGTC	5 cut(s)	965, 1187, 1471, 1543, 1597
PpsI	GAGTC	5 cut(s)	965, 1187, 1471, 1543, 1597
PpuMI	RGGWCCY	3 cut(s)	331, 1681, 1718
PshAI	GACNNNNGTC	1 cut(s)	1639
Psp124BI	GAGCTC	2 cut(s)	423, 672
Psp5II	RGGWCCY	3 cut(s)	331, 1681, 1718
Psp6I	CCWGG	5 cut(s)	9, 721, 788, 1637, 1669
PspGI	CCWGG	5 cut(s)	9, 721, 788, 1637, 1669
PspN4I	GGNNCC	6 cut(s)	333, 379, 720, 1226, 1288, 1636
PspPI	GGNCC	5 cut(s)	331, 1634, 1641, 1681, 1718
PspPPI	RGGWCCY	3 cut(s)	331, 1681, 1718
PsuI	RGATCY	2 cut(s)	211, 226
PvuII	CAGCTG	1 cut(s)	1145
RsaI	GTAC	6 cut(s)	267, 529, 720, 1226, 1245, 1514
RsaNI	GTAC	6 cut(s)	266, 528, 719, 1225, 1244, 1513
RseI	CAYNNNNRTG	1 cut(s)	1529
SacI	GAGCTC	2 cut(s)	423, 672
SapI	GCTCTTC	1 cut(s)	1022
SaqAI	TTAA	4 cut(s)	713, 948, 1068, 1686
SatI	GCNGC	4 cut(s)	123, 1173, 1314, 1317
Sau3AI	GATC	6 cut(s)	211, 226, 281, 511, 734, 1019
Sau96I	GGNCC	5 cut(s)	331, 1634, 1641, 1681, 1718
ScaI	AGTACT	1 cut(s)	1514
SchI	GAGTC	5 cut(s)	966, 1188, 1472, 1544, 1597
ScrFI	CCNGG	5 cut(s)	11, 723, 790, 1639, 1671
SduI	GDGCHC	2 cut(s)	423, 672
SfaNI	GCATC	3 cut(s)	981, 1041, 1300
SfcI	CTRYAG	1 cut(s)	1713
SinI	GGWCC	5 cut(s)	331, 1634, 1641, 1681, 1718
SmiMI	CAYNNNNRTG	1 cut(s)	1529
SmlI	CTYRAG	3 cut(s)	62, 1516, 1745
SmoI	CTYRAG	3 cut(s)	62, 1516, 1745
Sse9I	AATT	9 cut(s)	111, 494, 679, 710, 1259, 1338, 1432, 1457, 1478
SsiI	CCGC	3 cut(s)	279, 366, 578
SspMI	CTAG	5 cut(s)	174, 255, 675, 1184, 1792
SstI	GAGCTC	2 cut(s)	423, 672
StyD4I	CCNGG	5 cut(s)	9, 721, 788, 1637, 1669
StyI	CCWWGG	7 cut(s)	486, 651, 663, 1125, 1183, 1387, 1492
TaaI	ACNGT	6 cut(s)	527, 566, 856, 973, 1193, 1291
TaiI	ACGT	2 cut(s)	754, 1408
TaqI	TCGA	2 cut(s)	18, 1771
TaqII	GACCGA	1 cut(s)	59
TasI	AATT	9 cut(s)	111, 494, 679, 710, 1259, 1338, 1432, 1457, 1478
TatI	WGTACW	3 cut(s)	265, 1243, 1512
TfiI	GAWTC	3 cut(s)	503, 1131, 1750
Tru1I	TTAA	4 cut(s)	713, 948, 1068, 1686
Tru9I	TTAA	4 cut(s)	713, 948, 1068, 1686
TscAI	CASTG	5 cut(s)	733, 877, 1045, 1087, 1173
TseFI	GTSAC	2 cut(s)	850, 979
TseI	GCWGC	4 cut(s)	122, 1172, 1313, 1316
Tsp45I	GTSAC	2 cut(s)	850, 979
TspDTI	ATGAA	4 cut(s)	161, 735, 846, 1102
TspGWI	ACGGA	5 cut(s)	167, 221, 496, 1077, 1647
TspRI	CASTG	5 cut(s)	733, 877, 1045, 1087, 1173
VpaK11BI	GGWCC	5 cut(s)	331, 1634, 1641, 1681, 1718
XagI	CCTNNNNNAGG	1 cut(s)	1688
XapI	RAATTY	1 cut(s)	1457
XceI	RCATGY	1 cut(s)	603
XcmI	CCANNNNNNNNNTGG	1 cut(s)	853
XmaJI	CCTAGG	1 cut(s)	1183
XmiI	GTMKAC	1 cut(s)	1538
XspI	CTAG	5 cut(s)	174, 255, 675, 1184, 1792
ZrmI	AGTACT	1 cut(s)	1514
Zsp2I	ATGCAT	1 cut(s)	605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.