Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000838.1

Orthogroup ID

OG0011637

Physical Location & Seq

Genomic Coordinates Reverse (-)

40166 .. 43374

Gene Structure 3209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000838.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

atggctaatgactctgattctgcatcaccggattcttcaccttcaccaccaacatcatcagactcctcgtcttcgtcgtcatcctcacccgcaccttcaaaggaatccccaaagaattcgaaagatacacagtcgccaaccccatctcctccaaaaaactcctcaccgccgccatcttcccctccaccgtcctcaccaccaccttcgtctcctcctccatcgacgcctcccccgaaggacgatgacgatcaatcgcccgagtcaccgaaacaaaactcctcgcctgctccaccaaaggacaactcgcagccagctccggccactccggcaactccggccactccggccactccagctggtagcaatacaccacccaaaccaaaagctccgggtgttccggctaccactgtctatgcgccgcctcccccacgtgctaaaacttcgccctccaatgcagtgacaccaccaccaccttccaacgactcttcagatgatagtagtggcaatgactccgataaaggggtggtggtaggagtggggatcggcgccggagtaattgtacttctgttgctcgtcatttgtgtgctttgcttcaggaggaagaggagaaagaatgaccacatgcaatattatggagatccactcaaaggtggtggtcatgactactacaacactacacagcaacacaattggaacatgaatacaccgccacaaggagaccatgtggtcaggctaaaccaagcggcagctggtagtaatcgtggtggtggtgcctggccttcaccgcctcctcctatgccgatgagcggtgaaatgacagggaatttctcaggaccccacggaccccccttgccacctccctcaccaaacatgtcactcggcgggttcaaccagaacaccttcacttatgatgacctagcaaccgctactaacgggttctcacaagccaatttgttgggtcaaggtgggttcgggtttgtgcacaagggcgtcctccccagtggaaaagaggttgcggtgaagagtctcaaggtcggtagtgggcaaggtgaacgggaatttgctgcggaggtcgagatcattagccgagttcatcaccgacatctagtgtcgctcgttggatattgcatttccggtggccatagattgttggtctatgagtttgttcccaattcaaccatggaacatcacttgcatggcaatggacttccaccaatggattgggcaactaggcttcggatcgcaactggatctgctaaagggcttgcctaccttcatgaggactgccatcccaagatcatccatcgtgatatcaaatctgctaatattctcctggataacaactatgaggccatggttgctgattttgggttggctaagctgtcatctgacaactacacccatgtttctacacgggttatgggtactttcgggtatttggctccagaatatgcatcaagtggaaagttgacagagaagtccgatgtcttctcatttggagtcatgcttttggaactcataactggaaaaagaccggttgatccttcaaatgccatggaagacagcttagtggactgggcacgaccacttctcacacgggcactagaggacggtaactatacagagttggtggatatccgcttggacaacacctacaacagtcaagaaatggcacgcatggtcgcctgtgctgctgccagtattcgtcactctgctaaacgacgcccaaagatgagccagattgtacgcgcattggaaggagatgtgtcgttagacgacttaaatgagggggtaaaaccagggcagaccgttatgatgaatcccgctgctggtggaagctcgggctataacacagaggcatacaatgccgacatgaagaagttcaggaagttagccctttcgagccagacgagcagtgagttcggaactaacagttccgactccacagaaatgaccatccctgcgaacccaaagccgccaccaaagttctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019722 GO:0019932 GO:0022622 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0090351 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

663

Amino Acids

70.08

Weight (kDa)

6.42

Isoelectric Point (pI)

61.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18470 AT2G18470 AT2G18470 AT2G18470
fragaria_vesca	FvH4_1g13460
malus_domestica	MD02G1149900.v1.1 MD15G1264500.v1.1
prunus_persica	Prupe.7G153100_v2.0.a1 Prupe.7G153100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0101841
rosa_multiflora	Rmu_sc0000838.1_g000006
rosa_roxburghii	Rroxscaffold_2G00141000
rosa_rugosa	Rorug02G0102200 Rorug02G0102300
rosa_samantha	Rh2AG149800 Rh2BG155300 Rh2CG155700 Rh2DG155500
rosa_wichuraiana	Rw2G011720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	725, 1477
AccB1I	GGYRCC	2 cut(s)	545, 770
AccBSI	CCGCTC	1 cut(s)	807
AccII	CGCG	1 cut(s)	1749
AclWI	GGATC	5 cut(s)	548, 632, 1247, 1258, 1535
AcoI	YGGCCR	4 cut(s)	318, 336, 345, 1138
AcsI	RAATTY	3 cut(s)	115, 823, 1058
AcuI	CTGAAG	2 cut(s)	471, 577
AcvI	CACGTG	1 cut(s)	431
AcyI	GRCGYC	4 cut(s)	224, 546, 990, 1723
AfaI	GTAC	3 cut(s)	561, 1426, 1746
AfiI	CCNNNNNNNGG	6 cut(s)	519, 647, 713, 806, 1279, 1829
AflIII	ACRYGT	1 cut(s)	870
AgeI	ACCGGT	1 cut(s)	1534
AgsI	TTSAA	4 cut(s)	99, 889, 1176, 1548
AhdI	GACNNNNNGTC	1 cut(s)	67
AjnI	CCWGG	3 cut(s)	773, 1332, 1798
AluBI	AGCT	7 cut(s)	314, 356, 386, 749, 1381, 1566, 1839
AluI	AGCT	7 cut(s)	314, 356, 386, 749, 1381, 1566, 1839
Alw21I	GWGCWC	1 cut(s)	984
Alw26I	GTCTC	3 cut(s)	213, 711, 1031
Alw44I	GTGCAC	1 cut(s)	980
AlwI	GGATC	5 cut(s)	548, 632, 1247, 1258, 1535
Ama87I	CYCGRG	2 cut(s)	257, 1840
AoxI	GGCC	6 cut(s)	318, 336, 345, 776, 1138, 1350
ApaLI	GTGCAC	1 cut(s)	980
ApeKI	GCWGC	6 cut(s)	307, 746, 1064, 1691, 1694, 1826
ApoI	RAATTY	3 cut(s)	115, 823, 1058
AsiGI	ACCGGT	1 cut(s)	1534
Asp700I	GAANNNNTTC	2 cut(s)	899, 1880
AspLEI	GCGC	3 cut(s)	418, 548, 1751
AspS9I	GGNCC	2 cut(s)	833, 842
AsuC2I	CCSGG	1 cut(s)	390
AsuII	TTCGAA	1 cut(s)	119
AvaI	CYCGRG	2 cut(s)	257, 1840
AvaII	GGWCC	2 cut(s)	833, 842
BaeGI	GKGCMC	3 cut(s)	984, 1582, 1603
BalI	TGGCCA	1 cut(s)	1140
BanI	GGYRCC	2 cut(s)	545, 770
BarI	GAAGNNNNNNTAC	2 cut(s)	546, 578
BbrPI	CACGTG	1 cut(s)	431
BbsI	GAAGAC	3 cut(s)	63, 1480, 1566
Bbv12I	GWGCWC	1 cut(s)	984
BbvI	GCAGC	6 cut(s)	319, 758, 1051, 1678, 1681, 1813
BccI	CCATC	6 cut(s)	151, 181, 226, 1296, 1311, 1964
BcgI	CGANNNNNNTGC	2 cut(s)	1903, 1937
BciT130I	CCWGG	3 cut(s)	775, 1334, 1800
BcnI	CCSGG	1 cut(s)	390
BcoDI	GTCTC	3 cut(s)	213, 711, 1031
BfaI	CTAG	4 cut(s)	917, 1106, 1230, 1604
BfoI	RGCGCY	1 cut(s)	549
BglI	GCCNNNNNGGC	2 cut(s)	326, 344
BlpI	GCTNAGC	1 cut(s)	1377
Bme1390I	CCNGG	4 cut(s)	390, 775, 1334, 1800
Bme18I	GGWCC	2 cut(s)	833, 842
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	2 cut(s)	257, 1840
BmgT120I	GGNCC	2 cut(s)	833, 842
BmiI	GGNNCC	5 cut(s)	547, 772, 835, 844, 1443
BmrFI	CCNGG	4 cut(s)	390, 775, 1334, 1800
BmrI	ACTGGG	2 cut(s)	993, 1585
BmsI	GCATC	2 cut(s)	32, 1463
BmuI	ACTGGG	2 cut(s)	993, 1585
BpiI	GAAGAC	3 cut(s)	63, 1480, 1566
BplI	GAGNNNNNCTC	2 cut(s)	627, 659
BpmI	CTGGAG	2 cut(s)	336, 1428
Bpu1102I	GCTNAGC	1 cut(s)	1377
Bpu14I	TTCGAA	1 cut(s)	119
BpuEI	CTTGAG	1 cut(s)	1013
BpuMI	CCSGG	1 cut(s)	390
BsaAI	YACGTR	1 cut(s)	431
BsaBI	GATNNNNATC	1 cut(s)	246
BsaHI	GRCGYC	4 cut(s)	224, 546, 990, 1723
BsaI	GGTCTC	1 cut(s)	711
BsaJI	CCNNGG	5 cut(s)	838, 1179, 1353, 1554, 1799
BsaWI	WCCGGW	3 cut(s)	28, 1133, 1534
BsaXI	ACNNNNNCTCC	6 cut(s)	130, 160, 543, 573, 708, 738
Bsc4I	CCNNNNNNNGG	6 cut(s)	519, 647, 713, 806, 1279, 1829
Bse118I	RCCGGY	1 cut(s)	1534
Bse1I	ACTGG	5 cut(s)	999, 1252, 1528, 1580, 1698
Bse3DI	GCAATG	2 cut(s)	511, 1207
Bse8I	GATNNNNATC	1 cut(s)	246
BseBI	CCWGG	3 cut(s)	775, 1334, 1800
BseDI	CCNNGG	5 cut(s)	838, 1179, 1353, 1554, 1799
BseGI	GGATG	4 cut(s)	80, 1288, 1299, 1956
BseJI	GATNNNNATC	1 cut(s)	246
BseLI	CCNNNNNNNGG	6 cut(s)	519, 647, 713, 806, 1279, 1829
BseMI	GCAATG	2 cut(s)	511, 1207
BseMII	CTCAG	1 cut(s)	843
BseNI	ACTGG	5 cut(s)	999, 1252, 1528, 1580, 1698
BseRI	GAGGAG	8 cut(s)	55, 138, 151, 201, 204, 268, 619, 780
BseSI	GKGCMC	3 cut(s)	984, 1582, 1603
BseXI	GCAGC	6 cut(s)	319, 758, 1051, 1678, 1681, 1813
Bsh1236I	CGCG	1 cut(s)	1749
BshFI	GGCC	6 cut(s)	320, 338, 347, 778, 1140, 1352
BshNI	GGYRCC	2 cut(s)	545, 770
BshTI	ACCGGT	1 cut(s)	1534
BsiHKAI	GWGCWC	1 cut(s)	984
BsiHKCI	CYCGRG	2 cut(s)	257, 1840
BslI	CCNNNNNNNGG	6 cut(s)	519, 647, 713, 806, 1279, 1829
BsmAI	GTCTC	3 cut(s)	213, 711, 1031
BsmBI	CGTCTC	1 cut(s)	213
BsnI	GGCC	6 cut(s)	320, 338, 347, 778, 1140, 1352
Bso31I	GGTCTC	1 cut(s)	711
BsoBI	CYCGRG	2 cut(s)	257, 1840
Bsp119I	TTCGAA	1 cut(s)	119
Bsp1286I	GDGCHC	3 cut(s)	984, 1582, 1603
Bsp143I	GATC	8 cut(s)	247, 540, 637, 1077, 1239, 1250, 1296, 1540
Bsp1720I	GCTNAGC	1 cut(s)	1377
Bsp19I	CCATGG	3 cut(s)	1179, 1353, 1554
BspANI	GGCC	6 cut(s)	320, 338, 347, 778, 1140, 1352
BspCNI	CTCAG	1 cut(s)	842
BspFNI	CGCG	1 cut(s)	1749
BspHI	TCATGA	2 cut(s)	658, 1276
BspLI	GGNNCC	5 cut(s)	547, 772, 835, 844, 1443
BspPI	GGATC	5 cut(s)	548, 632, 1247, 1258, 1535
BspT104I	TTCGAA	1 cut(s)	119
BspT107I	GGYRCC	2 cut(s)	545, 770
BspTNI	GGTCTC	1 cut(s)	711
BsrBI	CCGCTC	1 cut(s)	807
BsrDI	GCAATG	2 cut(s)	511, 1207
BsrFI	RCCGGY	1 cut(s)	1534
BsrI	ACTGG	5 cut(s)	999, 1252, 1528, 1580, 1698
BssAI	RCCGGY	1 cut(s)	1534
BssECI	CCNNGG	5 cut(s)	838, 1179, 1353, 1554, 1799
BssMI	GATC	8 cut(s)	247, 540, 637, 1077, 1239, 1250, 1296, 1540
BssNI	GRCGYC	4 cut(s)	224, 546, 990, 1723
BssT1I	CCWWGG	3 cut(s)	1179, 1353, 1554
Bst2UI	CCWGG	3 cut(s)	775, 1334, 1800
Bst4CI	ACNGT	7 cut(s)	132, 189, 409, 1613, 1661, 1810, 1934
Bst6I	CTCTTC	3 cut(s)	490, 596, 1016
BstACI	GRCGYC	4 cut(s)	224, 546, 990, 1723
BstAPI	GCANNNNNTGC	1 cut(s)	1865
BstBAI	YACGTR	1 cut(s)	431
BstBI	TTCGAA	1 cut(s)	119
BstC8I	GCNNGC	4 cut(s)	285, 312, 1266, 1675
BstDEI	CTNAG	3 cut(s)	829, 1377, 1567
BstDSI	CCRYGG	4 cut(s)	838, 1179, 1353, 1554
BstENI	CCTNNNNNAGG	1 cut(s)	1277
BstF5I	GGATG	4 cut(s)	80, 1288, 1299, 1956
BstFNI	CGCG	1 cut(s)	1749
BstH2I	RGCGCY	1 cut(s)	549
BstHHI	GCGC	3 cut(s)	418, 548, 1751
BstKTI	GATC	8 cut(s)	250, 543, 640, 1080, 1242, 1253, 1299, 1543
BstMAI	GTCTC	3 cut(s)	213, 711, 1031
BstMBI	GATC	8 cut(s)	247, 540, 637, 1077, 1239, 1250, 1296, 1540
BstMWI	GCNNNNNNNGC	9 cut(s)	326, 335, 344, 353, 784, 1358, 1691, 1865, 1911
BstNI	CCWGG	3 cut(s)	775, 1334, 1800
BstNSI	RCATGY	2 cut(s)	625, 874
BstSCI	CCNGG	4 cut(s)	388, 773, 1332, 1798
BstSLI	GKGCMC	3 cut(s)	984, 1582, 1603
BstUI	CGCG	1 cut(s)	1749
BstV1I	GCAGC	6 cut(s)	319, 758, 1051, 1678, 1681, 1813
BstV2I	GAAGAC	3 cut(s)	63, 1480, 1566
BstX2I	RGATCY	2 cut(s)	637, 1250
BstXI	CCANNNNNNTGG	2 cut(s)	955, 1221
BstYI	RGATCY	2 cut(s)	637, 1250
BsuRI	GGCC	6 cut(s)	320, 338, 347, 778, 1140, 1352
BtgI	CCRYGG	4 cut(s)	838, 1179, 1353, 1554
BtsCI	GGATG	4 cut(s)	80, 1288, 1299, 1956
BtsI	GCAGTG	2 cut(s)	462, 1921
BtsIMutI	CAGTG	4 cut(s)	405, 462, 1006, 1921
Cac8I	GCNNGC	4 cut(s)	285, 312, 1266, 1675
CciI	TCATGA	2 cut(s)	658, 1276
CfoI	GCGC	3 cut(s)	418, 548, 1751
Cfr10I	RCCGGY	1 cut(s)	1534
Cfr13I	GGNCC	2 cut(s)	833, 842
CseI	GACGC	3 cut(s)	232, 979, 1731
Csp6I	GTAC	3 cut(s)	560, 1425, 1745
CspAI	ACCGGT	1 cut(s)	1534
CspCI	CAANNNNNGTGG	2 cut(s)	634, 669
CviQI	GTAC	3 cut(s)	560, 1425, 1745
DdeI	CTNAG	3 cut(s)	829, 1377, 1567
DinI	GGCGCC	1 cut(s)	547
DpnI	GATC	8 cut(s)	249, 542, 639, 1079, 1241, 1252, 1298, 1542
DpnII	GATC	8 cut(s)	247, 540, 637, 1077, 1239, 1250, 1296, 1540
DrdI	GACNNNNNNGTC	2 cut(s)	725, 1477
DriI	GACNNNNNGTC	1 cut(s)	67
DseDI	GACNNNNNNGTC	2 cut(s)	725, 1477
EaeI	YGGCCR	4 cut(s)	318, 336, 345, 1138
Eam1104I	CTCTTC	3 cut(s)	490, 596, 1016
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	3 cut(s)	490, 596, 1016
Eco130I	CCWWGG	3 cut(s)	1179, 1353, 1554
Eco31I	GGTCTC	1 cut(s)	711
Eco32I	GATATC	2 cut(s)	1312, 1636
Eco47I	GGWCC	2 cut(s)	833, 842
Eco57I	CTGAAG	2 cut(s)	471, 577
Eco72I	CACGTG	1 cut(s)	431
Eco88I	CYCGRG	2 cut(s)	257, 1840
EcoNI	CCTNNNNNAGG	1 cut(s)	1277
EcoO109I	RGGNCCY	1 cut(s)	833
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	3 cut(s)	773, 1332, 1798
EcoRV	GATATC	2 cut(s)	1312, 1636
EcoT14I	CCWWGG	3 cut(s)	1179, 1353, 1554
EcoT22I	ATGCAT	1 cut(s)	1456
EgeI	GGCGCC	1 cut(s)	547
EheI	GGCGCC	1 cut(s)	547
ErhI	CCWWGG	3 cut(s)	1179, 1353, 1554
Esp3I	CGTCTC	1 cut(s)	213
FauI	CCCGC	3 cut(s)	97, 875, 1831
FokI	GGATG	4 cut(s)	67, 1275, 1286, 1943
FspBI	CTAG	4 cut(s)	917, 1106, 1230, 1604
GlaI	GCGC	3 cut(s)	417, 547, 1750
GsuI	CTGGAG	2 cut(s)	336, 1428
HaeII	RGCGCY	1 cut(s)	549
HaeIII	GGCC	6 cut(s)	320, 338, 347, 778, 1140, 1352
HgaI	GACGC	3 cut(s)	232, 979, 1731
HhaI	GCGC	3 cut(s)	418, 548, 1751
Hin1I	GRCGYC	4 cut(s)	224, 546, 990, 1723
Hin6I	GCGC	3 cut(s)	416, 546, 1749
HinP1I	GCGC	3 cut(s)	416, 546, 1749
HincII	GTYRAC	1 cut(s)	1470
HindII	GTYRAC	1 cut(s)	1470
Hpy166II	GTNNAC	4 cut(s)	982, 1052, 1470, 1573
Hpy188III	TCNNGA	9 cut(s)	595, 659, 831, 1075, 1277, 1307, 1445, 1664, 1885
Hpy8I	GTNNAC	4 cut(s)	982, 1052, 1470, 1573
Hpy99I	CGWCG	3 cut(s)	79, 226, 1725
HpyCH4III	ACNGT	7 cut(s)	132, 189, 409, 1613, 1661, 1810, 1934
HpyCH4IV	ACGT	1 cut(s)	430
HpyCH4V	TGCA	7 cut(s)	23, 455, 625, 982, 1128, 1195, 1454
HpyF10VI	GCNNNNNNNGC	9 cut(s)	326, 335, 344, 353, 784, 1358, 1691, 1865, 1911
HpyF3I	CTNAG	3 cut(s)	829, 1377, 1567
HpySE526I	ACGT	1 cut(s)	430
Hsp92I	GRCGYC	4 cut(s)	224, 546, 990, 1723
HspAI	GCGC	3 cut(s)	416, 546, 1749
KasI	GGCGCC	1 cut(s)	545
Kzo9I	GATC	8 cut(s)	247, 540, 637, 1077, 1239, 1250, 1296, 1540
LmnI	GCTCC	4 cut(s)	292, 319, 391, 1447
Lsp1109I	GCAGC	6 cut(s)	319, 758, 1051, 1678, 1681, 1813
LweI	GCATC	2 cut(s)	32, 1463
MaeI	CTAG	4 cut(s)	917, 1106, 1230, 1604
MaeII	ACGT	1 cut(s)	430
MaeIII	GTNAC	5 cut(s)	261, 457, 873, 1613, 1706
MalI	GATC	8 cut(s)	249, 542, 639, 1079, 1241, 1252, 1298, 1542
MbiI	CCGCTC	1 cut(s)	807
MboI	GATC	8 cut(s)	247, 540, 637, 1077, 1239, 1250, 1296, 1540
MboII	GAAGA	9 cut(s)	27, 63, 168, 477, 613, 1033, 1480, 1571, 1888
MfeI	CAATTG	1 cut(s)	688
MflI	RGATCY	2 cut(s)	637, 1250
MhlI	GDGCHC	3 cut(s)	984, 1582, 1603
MlsI	TGGCCA	1 cut(s)	1140
MluCI	AATT	7 cut(s)	115, 555, 688, 823, 949, 1058, 1171
MluNI	TGGCCA	1 cut(s)	1140
Mly113I	GGCGCC	1 cut(s)	546
MlyI	GAGTC	8 cut(s)	5, 56, 269, 476, 503, 1033, 1509, 1934
MmeI	TCCRAC	3 cut(s)	501, 1099, 1962
Mox20I	TGGCCA	1 cut(s)	1140
Mph1103I	ATGCAT	1 cut(s)	1456
MroXI	GAANNNNTTC	2 cut(s)	899, 1880
MscI	TGGCCA	1 cut(s)	1140
MseI	TTAA	1 cut(s)	1781
MslI	CAYNNNNRTG	4 cut(s)	581, 1194, 1200, 1949
Msp20I	TGGCCA	1 cut(s)	1140
MspA1I	CMGCKG	3 cut(s)	356, 749, 1826
MspR9I	CCNGG	4 cut(s)	390, 775, 1334, 1800
MunI	CAATTG	1 cut(s)	688
MvaI	CCWGG	3 cut(s)	775, 1334, 1800
MvnI	CGCG	1 cut(s)	1749
MwoI	GCNNNNNNNGC	9 cut(s)	326, 335, 344, 353, 784, 1358, 1691, 1865, 1911
NarI	GGCGCC	1 cut(s)	546
NciI	CCSGG	1 cut(s)	390
NcoI	CCATGG	3 cut(s)	1179, 1353, 1554
NdeII	GATC	8 cut(s)	247, 540, 637, 1077, 1239, 1250, 1296, 1540
NlaIV	GGNNCC	5 cut(s)	547, 772, 835, 844, 1443
NmeAIII	GCCGAG	2 cut(s)	858, 1112
NmuCI	GTSAC	4 cut(s)	261, 457, 873, 1706
NsiI	ATGCAT	1 cut(s)	1456
NspI	RCATGY	2 cut(s)	625, 874
NspV	TTCGAA	1 cut(s)	119
PagI	TCATGA	2 cut(s)	658, 1276
PciI	ACATGT	1 cut(s)	870
PcsI	WCGNNNNNNNCGW	3 cut(s)	74, 230, 1907
PdmI	GAANNNNTTC	2 cut(s)	899, 1880
PfeI	GAWTC	4 cut(s)	17, 32, 104, 1819
PfoI	TCCNGGA	1 cut(s)	1332
PinAI	ACCGGT	1 cut(s)	1534
PleI	GAGTC	8 cut(s)	5, 56, 268, 476, 503, 1032, 1508, 1934
PluTI	GGCGCC	1 cut(s)	549
PmaCI	CACGTG	1 cut(s)	431
PmlI	CACGTG	1 cut(s)	431
PpsI	GAGTC	8 cut(s)	5, 56, 268, 476, 503, 1032, 1508, 1934
Ppu21I	YACGTR	1 cut(s)	431
PpuMI	RGGWCCY	1 cut(s)	833
PscI	ACATGT	1 cut(s)	870
Psp5II	RGGWCCY	1 cut(s)	833
Psp6I	CCWGG	3 cut(s)	773, 1332, 1798
PspCI	CACGTG	1 cut(s)	431
PspGI	CCWGG	3 cut(s)	773, 1332, 1798
PspN4I	GGNNCC	5 cut(s)	547, 772, 835, 844, 1443
PspPI	GGNCC	2 cut(s)	833, 842
PspPPI	RGGWCCY	1 cut(s)	833
PsuI	RGATCY	2 cut(s)	637, 1250
PvuII	CAGCTG	2 cut(s)	356, 749
RsaI	GTAC	3 cut(s)	561, 1426, 1746
RsaNI	GTAC	3 cut(s)	560, 1425, 1745
RseI	CAYNNNNRTG	4 cut(s)	581, 1194, 1200, 1949
SaqAI	TTAA	1 cut(s)	1781
Sau3AI	GATC	8 cut(s)	247, 540, 637, 1077, 1239, 1250, 1296, 1540
Sau96I	GGNCC	2 cut(s)	833, 842
SchI	GAGTC	8 cut(s)	5, 56, 269, 476, 503, 1033, 1509, 1934
ScrFI	CCNGG	4 cut(s)	390, 775, 1334, 1800
SduI	GDGCHC	3 cut(s)	984, 1582, 1603
SfaNI	GCATC	2 cut(s)	32, 1463
SfiI	GGCCNNNNNGGCC	1 cut(s)	344
SfoI	GGCGCC	1 cut(s)	547
SfuI	TTCGAA	1 cut(s)	119
SinI	GGWCC	2 cut(s)	833, 842
SmiMI	CAYNNNNRTG	4 cut(s)	581, 1194, 1200, 1949
SmlI	CTYRAG	1 cut(s)	1028
SmoI	CTYRAG	1 cut(s)	1028
Sse9I	AATT	7 cut(s)	115, 555, 688, 823, 949, 1058, 1171
SspDI	GGCGCC	1 cut(s)	545
SspI	AATATT	2 cut(s)	629, 1327
SspMI	CTAG	4 cut(s)	917, 1106, 1230, 1604
StyD4I	CCNGG	4 cut(s)	388, 773, 1332, 1798
StyI	CCWWGG	3 cut(s)	1179, 1353, 1554
TaaI	ACNGT	7 cut(s)	132, 189, 409, 1613, 1661, 1810, 1934
TaiI	ACGT	1 cut(s)	433
TaqI	TCGA	4 cut(s)	119, 221, 1074, 1901
TasI	AATT	7 cut(s)	115, 555, 688, 823, 949, 1058, 1171
TatI	WGTACW	1 cut(s)	559
TauI	GCSGC	4 cut(s)	172, 421, 746, 1978
TfiI	GAWTC	4 cut(s)	17, 32, 104, 1819
Tru1I	TTAA	1 cut(s)	1781
Tru9I	TTAA	1 cut(s)	1781
TscAI	CASTG	4 cut(s)	412, 462, 1006, 1921
TseFI	GTSAC	4 cut(s)	261, 457, 873, 1706
TseI	GCWGC	6 cut(s)	307, 746, 1064, 1691, 1694, 1826
Tsp45I	GTSAC	4 cut(s)	261, 457, 873, 1706
TspDTI	ATGAA	5 cut(s)	713, 1082, 1265, 1832, 1889
TspGWI	ACGGA	1 cut(s)	855
TspRI	CASTG	4 cut(s)	412, 462, 1006, 1921
VneI	GTGCAC	1 cut(s)	980
VpaK11BI	GGWCC	2 cut(s)	833, 842
XagI	CCTNNNNNAGG	1 cut(s)	1277
XapI	RAATTY	3 cut(s)	115, 823, 1058
XceI	RCATGY	2 cut(s)	625, 874
XcmI	CCANNNNNNNNNTGG	3 cut(s)	746, 1177, 1218
XmnI	GAANNNNTTC	2 cut(s)	899, 1880
XspI	CTAG	4 cut(s)	917, 1106, 1230, 1604
Zsp2I	ATGCAT	1 cut(s)	1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.