Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0011637

Physical Location & Seq

Genomic Coordinates Reverse (-)

13294882 .. 13299483

Gene Structure 4602 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG155300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGCTAATGACTCTGATTCTCCATCACCGGATTCTTCACCTTCACCACCAACATCATCAGACTCCTCGTCTTCGTCGTCATCCTCACCCGCACCTTCAAAGGAATCCCCAAAGAATTCGAAAGATACACAGTCGCCAACCCCATCTCCTCCAAAAAACTCCTCACCTCCGCCATCTTCCCCTCCACCGTCCTCACCACCACCTTCGTCTCCTCCTCCATCAACGCCTCCCCAGAAGGACGATGACGATCAATCGCCCGAGTCCCCGAAACAAAACTCCTCGCCTGCTCCACCAAAGGACAACTCGCAGCCAGCTCCGGCCACTCCGGCAACTCCGGCCACTCCAGCTGGTAGCAATACACCACCCAAACCAAAAGCTCCGGGTGTTCCGGCTACCACTGTCTATGCGCCGCCTCCCCCACGTGCTAAAACTTCGCCCTCCAATGCAGTGACACCACCACCACCTTCCAACGACTCTTCAGATGATAGCAGTGGCAATGACTCCGATAAAGGGGTGGTGGTAGGAGTGGGGATCGGCGCCGGAGTAATTGTACTTCTGTTGCTCGTCATTTGTGTGCTTTGCTTCAGGAGGAAGAGGAGAAAGAATGACCACATGCAATATTATGGAGATCCACTCAAAGGTGGTGGTCATGACTACTACAACACTACACAGCAACACAATTGGAACATGAATACACCGCCACAAGGAGACCATGTGGTCAGGCTAAACCAAGCAGCAGCTGGTAGTAATCGTGGTGGTGGTGCCTGGCCTTCACCGCCTCCTCCTATGCCGATGAGCGGTGAAATGACAGGGAATTTCTCAGGACCCCACGGACCCCCCTTGCCACCTCCCTCACCAAACATGTCACTCGGCGGGTTCAACCAGAACACCTTCACTTATGATGACCTAGCAACCGCTACTAACGGGTTCTCACAAGCCAATTTGTTGGGTCAAGGTGGGTTCGGGTTTGTGCACAAGGGCGTCCTCCCCAGTGGAAAAGAGGTTGCGGTGAAGAGTCTCAAGGTCGGTAGTGGGCAAGGTGAACGGGAATTTGCTGCGGAGGTCGAGATCATTAGCCGAGTTCATCACCGACATCTAGTGTCGCTCGTTGGATATTGCATTTCCGGTGGCCATAGATTGTTGGTCTATGAGTTTGTTCCCAATTCAACCATGGAACATCACTTGCATGGCAATGGACTTCCACCAATGGATTGGGCAACTAGGCTTCGGATCGCAACTGGATCTGCTAAAGGGCTTGCCTACCTTCATGAGGACTGCCATCCCAAGATCATCCATCGTGATATCAAATCTGCTAATATTCTCCTGGATAACAACTATGAGGCCATGGTTGCTGATTTTGGGTTGGCTAAGCTGTCATCTGACAACTACACCCATGTTTCTACACGGGTTATGGGTACTTTCGGGTATTTGGCTCCAGAATATGCATCAAGTGGAAAGTTGACAGAGAAGTCCGATGTCTTCTCATTTGGAGTCATGCTTTTGGAACTCATAACTGGAAAAAGACCGGTTGATCCTTCAAATGCCATGGAAGACAGCTTAGTGGACTGGGCTCGACCACTTCTCACACGGGCACTAGAGGACGGTAACTATACAGAGTTGGTGGATATCCGCTTGGACAACACCTACAACAGTCAAGAAATGGCACGCATGGTCGCCTGTGCTGCTGCCAGTATTCGTCACTCTGCTAAACGACGCCCAAAGATGAGCCAGGTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009845 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019722 GO:0019932 GO:0022622 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0090351 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

579

Amino Acids

61.3

Weight (kDa)

6.65

Isoelectric Point (pI)

66.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	311 - 518	3.9e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	313 - 513	7.5e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18470 AT2G18470 AT2G18470 AT2G18470
fragaria_vesca	FvH4_1g13460
malus_domestica	MD02G1149900.v1.1 MD15G1264500.v1.1
prunus_persica	Prupe.7G153100_v2.0.a1 Prupe.7G153100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0101841
rosa_multiflora	Rmu_sc0000838.1_g000006
rosa_roxburghii	Rroxscaffold_2G00141000
rosa_rugosa	Rorug02G0102200 Rorug02G0102300
rosa_samantha	Rh2AG149800 Rh2BG155300 Rh2CG155700 Rh2DG155500
rosa_wichuraiana	Rw2G011720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	716, 1468
AccB1I	GGYRCC	2 cut(s)	536, 761
AccBSI	CCGCTC	1 cut(s)	798
AclWI	GGATC	5 cut(s)	539, 623, 1238, 1249, 1526
AcoI	YGGCCR	3 cut(s)	318, 336, 1129
AcsI	RAATTY	3 cut(s)	115, 814, 1049
AcuI	CTGAAG	2 cut(s)	462, 568
AcvI	CACGTG	1 cut(s)	422
AcyI	GRCGYC	3 cut(s)	537, 981, 1714
AfaI	GTAC	2 cut(s)	552, 1417
AfiI	CCNNNNNNNGG	5 cut(s)	510, 638, 704, 797, 1270
AflIII	ACRYGT	1 cut(s)	861
AgeI	ACCGGT	1 cut(s)	1525
AgsI	TTSAA	4 cut(s)	99, 880, 1167, 1539
AhdI	GACNNNNNGTC	1 cut(s)	67
AjnI	CCWGG	3 cut(s)	764, 1323, 1728
AluBI	AGCT	6 cut(s)	314, 347, 377, 740, 1372, 1557
AluI	AGCT	6 cut(s)	314, 347, 377, 740, 1372, 1557
Alw21I	GWGCWC	2 cut(s)	975, 1737
Alw26I	GTCTC	3 cut(s)	213, 702, 1022
Alw44I	GTGCAC	1 cut(s)	971
AlwI	GGATC	5 cut(s)	539, 623, 1238, 1249, 1526
AlwNI	CAGNNNCTG	1 cut(s)	740
Ama87I	CYCGRG	1 cut(s)	257
AoxI	GGCC	5 cut(s)	318, 336, 767, 1129, 1341
ApaLI	GTGCAC	1 cut(s)	971
ApeKI	GCWGC	6 cut(s)	307, 734, 737, 1055, 1682, 1685
ApoI	RAATTY	3 cut(s)	115, 814, 1049
AsiGI	ACCGGT	1 cut(s)	1525
Asp700I	GAANNNNTTC	1 cut(s)	890
AspLEI	GCGC	2 cut(s)	409, 539
AspS9I	GGNCC	2 cut(s)	824, 833
AsuC2I	CCSGG	1 cut(s)	381
AsuII	TTCGAA	1 cut(s)	119
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	2 cut(s)	824, 833
BaeGI	GKGCMC	2 cut(s)	975, 1594
BalI	TGGCCA	1 cut(s)	1131
BanI	GGYRCC	2 cut(s)	536, 761
BanII	GRGCYC	1 cut(s)	1573
BarI	GAAGNNNNNNTAC	2 cut(s)	537, 569
BbrPI	CACGTG	1 cut(s)	422
BbsI	GAAGAC	3 cut(s)	63, 1471, 1557
Bbv12I	GWGCWC	2 cut(s)	975, 1737
BbvI	GCAGC	6 cut(s)	319, 746, 749, 1042, 1669, 1672
BccI	CCATC	6 cut(s)	31, 151, 181, 226, 1287, 1302
BciT130I	CCWGG	3 cut(s)	766, 1325, 1730
BcnI	CCSGG	1 cut(s)	381
BcoDI	GTCTC	3 cut(s)	213, 702, 1022
BfaI	CTAG	4 cut(s)	908, 1097, 1221, 1595
BfoI	RGCGCY	1 cut(s)	540
BglI	GCCNNNNNGGC	1 cut(s)	326
BisI	GCNGC	7 cut(s)	308, 410, 735, 738, 1056, 1683, 1686
BlpI	GCTNAGC	1 cut(s)	1368
BlsI	GCNGC	7 cut(s)	309, 411, 736, 739, 1057, 1684, 1687
Bme1390I	CCNGG	4 cut(s)	381, 766, 1325, 1730
Bme18I	GGWCC	2 cut(s)	824, 833
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	2 cut(s)	824, 833
BmiI	GGNNCC	5 cut(s)	538, 763, 826, 835, 1434
BmrFI	CCNGG	4 cut(s)	381, 766, 1325, 1730
BmrI	ACTGGG	2 cut(s)	984, 1576
BmsI	GCATC	1 cut(s)	1454
BmuI	ACTGGG	2 cut(s)	984, 1576
BpiI	GAAGAC	3 cut(s)	63, 1471, 1557
BplI	GAGNNNNNCTC	2 cut(s)	618, 650
BpmI	CTGGAG	2 cut(s)	327, 1419
Bpu1102I	GCTNAGC	1 cut(s)	1368
Bpu14I	TTCGAA	1 cut(s)	119
BpuEI	CTTGAG	1 cut(s)	1004
BpuMI	CCSGG	1 cut(s)	381
BsaAI	YACGTR	1 cut(s)	422
BsaBI	GATNNNNATC	1 cut(s)	246
BsaHI	GRCGYC	3 cut(s)	537, 981, 1714
BsaI	GGTCTC	1 cut(s)	702
BsaJI	CCNNGG	4 cut(s)	829, 1170, 1344, 1545
BsaWI	WCCGGW	3 cut(s)	28, 1124, 1525
BsaXI	ACNNNNNCTCC	6 cut(s)	130, 160, 534, 564, 699, 729
Bsc4I	CCNNNNNNNGG	5 cut(s)	510, 638, 704, 797, 1270
Bse118I	RCCGGY	1 cut(s)	1525
Bse1I	ACTGG	5 cut(s)	990, 1243, 1519, 1571, 1689
Bse3DI	GCAATG	2 cut(s)	502, 1198
Bse8I	GATNNNNATC	1 cut(s)	246
BseBI	CCWGG	3 cut(s)	766, 1325, 1730
BseDI	CCNNGG	4 cut(s)	829, 1170, 1344, 1545
BseGI	GGATG	3 cut(s)	80, 1279, 1290
BseJI	GATNNNNATC	1 cut(s)	246
BseLI	CCNNNNNNNGG	5 cut(s)	510, 638, 704, 797, 1270
BseMI	GCAATG	2 cut(s)	502, 1198
BseMII	CTCAG	1 cut(s)	834
BseNI	ACTGG	5 cut(s)	990, 1243, 1519, 1571, 1689
BseRI	GAGGAG	8 cut(s)	55, 138, 151, 201, 204, 268, 610, 771
BseSI	GKGCMC	2 cut(s)	975, 1594
BseXI	GCAGC	6 cut(s)	319, 746, 749, 1042, 1669, 1672
BshFI	GGCC	5 cut(s)	320, 338, 769, 1131, 1343
BshNI	GGYRCC	2 cut(s)	536, 761
BshTI	ACCGGT	1 cut(s)	1525
BsiHKAI	GWGCWC	2 cut(s)	975, 1737
BsiHKCI	CYCGRG	1 cut(s)	257
BsiSI	CCGG	9 cut(s)	29, 317, 326, 335, 380, 389, 540, 1125, 1526
BslFI	GGGAC	1 cut(s)	247
BslI	CCNNNNNNNGG	5 cut(s)	510, 638, 704, 797, 1270
BsmAI	GTCTC	3 cut(s)	213, 702, 1022
BsmBI	CGTCTC	1 cut(s)	213
BsmFI	GGGAC	1 cut(s)	247
BsnI	GGCC	5 cut(s)	320, 338, 769, 1131, 1343
Bso31I	GGTCTC	1 cut(s)	702
BsoBI	CYCGRG	1 cut(s)	257
Bsp119I	TTCGAA	1 cut(s)	119
Bsp1286I	GDGCHC	4 cut(s)	975, 1573, 1594, 1737
Bsp143I	GATC	8 cut(s)	247, 531, 628, 1068, 1230, 1241, 1287, 1531
Bsp1720I	GCTNAGC	1 cut(s)	1368
Bsp19I	CCATGG	3 cut(s)	1170, 1344, 1545
BspANI	GGCC	5 cut(s)	320, 338, 769, 1131, 1343
BspCNI	CTCAG	1 cut(s)	833
BspHI	TCATGA	2 cut(s)	649, 1267
BspLI	GGNNCC	5 cut(s)	538, 763, 826, 835, 1434
BspPI	GGATC	5 cut(s)	539, 623, 1238, 1249, 1526
BspT104I	TTCGAA	1 cut(s)	119
BspT107I	GGYRCC	2 cut(s)	536, 761
BspTNI	GGTCTC	1 cut(s)	702
BsrBI	CCGCTC	1 cut(s)	798
BsrDI	GCAATG	2 cut(s)	502, 1198
BsrFI	RCCGGY	1 cut(s)	1525
BsrI	ACTGG	5 cut(s)	990, 1243, 1519, 1571, 1689
BssAI	RCCGGY	1 cut(s)	1525
BssECI	CCNNGG	4 cut(s)	829, 1170, 1344, 1545
BssMI	GATC	8 cut(s)	247, 531, 628, 1068, 1230, 1241, 1287, 1531
BssNI	GRCGYC	3 cut(s)	537, 981, 1714
BssT1I	CCWWGG	3 cut(s)	1170, 1344, 1545
Bst2UI	CCWGG	3 cut(s)	766, 1325, 1730
Bst4CI	ACNGT	5 cut(s)	132, 189, 400, 1604, 1652
Bst6I	CTCTTC	3 cut(s)	481, 587, 1007
BstACI	GRCGYC	3 cut(s)	537, 981, 1714
BstBAI	YACGTR	1 cut(s)	422
BstBI	TTCGAA	1 cut(s)	119
BstC8I	GCNNGC	4 cut(s)	285, 312, 1257, 1666
BstDEI	CTNAG	3 cut(s)	820, 1368, 1558
BstDSI	CCRYGG	4 cut(s)	829, 1170, 1344, 1545
BstENI	CCTNNNNNAGG	1 cut(s)	1268
BstF5I	GGATG	3 cut(s)	80, 1279, 1290
BstH2I	RGCGCY	1 cut(s)	540
BstHHI	GCGC	2 cut(s)	409, 539
BstKTI	GATC	8 cut(s)	250, 534, 631, 1071, 1233, 1244, 1290, 1534
BstMAI	GTCTC	3 cut(s)	213, 702, 1022
BstMBI	GATC	8 cut(s)	247, 531, 628, 1068, 1230, 1241, 1287, 1531
BstMWI	GCNNNNNNNGC	6 cut(s)	326, 335, 344, 775, 1349, 1682
BstNI	CCWGG	3 cut(s)	766, 1325, 1730
BstNSI	RCATGY	2 cut(s)	616, 865
BstSCI	CCNGG	4 cut(s)	379, 764, 1323, 1728
BstSLI	GKGCMC	2 cut(s)	975, 1594
BstV1I	GCAGC	6 cut(s)	319, 746, 749, 1042, 1669, 1672
BstV2I	GAAGAC	3 cut(s)	63, 1471, 1557
BstX2I	RGATCY	2 cut(s)	628, 1241
BstXI	CCANNNNNNTGG	2 cut(s)	946, 1212
BstYI	RGATCY	2 cut(s)	628, 1241
BsuRI	GGCC	5 cut(s)	320, 338, 769, 1131, 1343
BtgI	CCRYGG	4 cut(s)	829, 1170, 1344, 1545
BtsCI	GGATG	3 cut(s)	80, 1279, 1290
BtsI	GCAGTG	2 cut(s)	453, 496
BtsIMutI	CAGTG	4 cut(s)	396, 453, 496, 997
Cac8I	GCNNGC	4 cut(s)	285, 312, 1257, 1666
CaiI	CAGNNNCTG	1 cut(s)	740
CciI	TCATGA	2 cut(s)	649, 1267
CfoI	GCGC	2 cut(s)	409, 539
Cfr10I	RCCGGY	1 cut(s)	1525
Cfr13I	GGNCC	2 cut(s)	824, 833
CseI	GACGC	2 cut(s)	970, 1722
Csp6I	GTAC	2 cut(s)	551, 1416
CspAI	ACCGGT	1 cut(s)	1525
CspCI	CAANNNNNGTGG	2 cut(s)	625, 660
CviQI	GTAC	2 cut(s)	551, 1416
DdeI	CTNAG	3 cut(s)	820, 1368, 1558
DinI	GGCGCC	1 cut(s)	538
DpnI	GATC	8 cut(s)	249, 533, 630, 1070, 1232, 1243, 1289, 1533
DpnII	GATC	8 cut(s)	247, 531, 628, 1068, 1230, 1241, 1287, 1531
DrdI	GACNNNNNNGTC	2 cut(s)	716, 1468
DriI	GACNNNNNGTC	1 cut(s)	67
DseDI	GACNNNNNNGTC	2 cut(s)	716, 1468
EaeI	YGGCCR	3 cut(s)	318, 336, 1129
Eam1104I	CTCTTC	3 cut(s)	481, 587, 1007
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	3 cut(s)	481, 587, 1007
EciI	GGCGGA	1 cut(s)	159
Eco130I	CCWWGG	3 cut(s)	1170, 1344, 1545
Eco24I	GRGCYC	1 cut(s)	1573
Eco31I	GGTCTC	1 cut(s)	702
Eco32I	GATATC	2 cut(s)	1303, 1627
Eco47I	GGWCC	2 cut(s)	824, 833
Eco57I	CTGAAG	2 cut(s)	462, 568
Eco72I	CACGTG	1 cut(s)	422
Eco88I	CYCGRG	1 cut(s)	257
EcoNI	CCTNNNNNAGG	1 cut(s)	1268
EcoO109I	RGGNCCY	1 cut(s)	824
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	3 cut(s)	764, 1323, 1728
EcoRV	GATATC	2 cut(s)	1303, 1627
EcoT14I	CCWWGG	3 cut(s)	1170, 1344, 1545
EcoT22I	ATGCAT	1 cut(s)	1447
EcoT38I	GRGCYC	1 cut(s)	1573
EgeI	GGCGCC	1 cut(s)	538
EheI	GGCGCC	1 cut(s)	538
ErhI	CCWWGG	3 cut(s)	1170, 1344, 1545
Esp3I	CGTCTC	1 cut(s)	213
FaqI	GGGAC	1 cut(s)	247
FauI	CCCGC	2 cut(s)	97, 866
Fnu4HI	GCNGC	7 cut(s)	308, 410, 735, 738, 1056, 1683, 1686
FokI	GGATG	3 cut(s)	67, 1266, 1277
FriOI	GRGCYC	1 cut(s)	1573
Fsp4HI	GCNGC	7 cut(s)	308, 410, 735, 738, 1056, 1683, 1686
FspBI	CTAG	4 cut(s)	908, 1097, 1221, 1595
GlaI	GCGC	2 cut(s)	408, 538
GluI	GCNGC	7 cut(s)	308, 410, 735, 738, 1056, 1683, 1686
GsuI	CTGGAG	2 cut(s)	327, 1419
HaeII	RGCGCY	1 cut(s)	540
HaeIII	GGCC	5 cut(s)	320, 338, 769, 1131, 1343
HapII	CCGG	9 cut(s)	29, 317, 326, 335, 380, 389, 540, 1125, 1526
HgaI	GACGC	2 cut(s)	970, 1722
HhaI	GCGC	2 cut(s)	409, 539
Hin1I	GRCGYC	3 cut(s)	537, 981, 1714
Hin6I	GCGC	2 cut(s)	407, 537
HinP1I	GCGC	2 cut(s)	407, 537
HincII	GTYRAC	1 cut(s)	1461
HindII	GTYRAC	1 cut(s)	1461
HpaII	CCGG	9 cut(s)	29, 317, 326, 335, 380, 389, 540, 1125, 1526
Hpy166II	GTNNAC	4 cut(s)	973, 1043, 1461, 1564
Hpy188I	TCNGA	7 cut(s)	16, 61, 481, 505, 1230, 1381, 1474
Hpy188III	TCNNGA	8 cut(s)	586, 650, 822, 1066, 1268, 1298, 1436, 1655
Hpy8I	GTNNAC	4 cut(s)	973, 1043, 1461, 1564
Hpy99I	CGWCG	2 cut(s)	79, 1716
HpyAV	CCTTC	9 cut(s)	51, 105, 213, 229, 474, 780, 901, 1274, 1545
HpyCH4III	ACNGT	5 cut(s)	132, 189, 400, 1604, 1652
HpyCH4IV	ACGT	1 cut(s)	421
HpyCH4V	TGCA	6 cut(s)	446, 616, 973, 1119, 1186, 1445
HpyF10VI	GCNNNNNNNGC	6 cut(s)	326, 335, 344, 775, 1349, 1682
HpyF3I	CTNAG	3 cut(s)	820, 1368, 1558
HpySE526I	ACGT	1 cut(s)	421
Hsp92I	GRCGYC	3 cut(s)	537, 981, 1714
HspAI	GCGC	2 cut(s)	407, 537
KasI	GGCGCC	1 cut(s)	536
Kzo9I	GATC	8 cut(s)	247, 531, 628, 1068, 1230, 1241, 1287, 1531
LmnI	GCTCC	4 cut(s)	292, 319, 382, 1438
Lsp1109I	GCAGC	6 cut(s)	319, 746, 749, 1042, 1669, 1672
LweI	GCATC	1 cut(s)	1454
MaeI	CTAG	4 cut(s)	908, 1097, 1221, 1595
MaeII	ACGT	1 cut(s)	421
MaeIII	GTNAC	4 cut(s)	448, 864, 1604, 1697
MalI	GATC	8 cut(s)	249, 533, 630, 1070, 1232, 1243, 1289, 1533
MbiI	CCGCTC	1 cut(s)	798
MboI	GATC	8 cut(s)	247, 531, 628, 1068, 1230, 1241, 1287, 1531
MboII	GAAGA	8 cut(s)	27, 63, 168, 468, 604, 1024, 1471, 1562
MfeI	CAATTG	1 cut(s)	679
MflI	RGATCY	2 cut(s)	628, 1241
MhlI	GDGCHC	4 cut(s)	975, 1573, 1594, 1737
MlsI	TGGCCA	1 cut(s)	1131
MluCI	AATT	7 cut(s)	115, 546, 679, 814, 940, 1049, 1162
MluNI	TGGCCA	1 cut(s)	1131
Mly113I	GGCGCC	1 cut(s)	537
MlyI	GAGTC	7 cut(s)	5, 56, 269, 467, 494, 1024, 1500
MmeI	TCCRAC	2 cut(s)	492, 1090
Mox20I	TGGCCA	1 cut(s)	1131
Mph1103I	ATGCAT	1 cut(s)	1447
MroXI	GAANNNNTTC	1 cut(s)	890
MscI	TGGCCA	1 cut(s)	1131
MslI	CAYNNNNRTG	3 cut(s)	572, 1185, 1191
Msp20I	TGGCCA	1 cut(s)	1131
MspA1I	CMGCKG	2 cut(s)	347, 740
MspI	CCGG	9 cut(s)	29, 317, 326, 335, 380, 389, 540, 1125, 1526
MspR9I	CCNGG	4 cut(s)	381, 766, 1325, 1730
MunI	CAATTG	1 cut(s)	679
MvaI	CCWGG	3 cut(s)	766, 1325, 1730
MwoI	GCNNNNNNNGC	6 cut(s)	326, 335, 344, 775, 1349, 1682
NarI	GGCGCC	1 cut(s)	537
NciI	CCSGG	1 cut(s)	381
NcoI	CCATGG	3 cut(s)	1170, 1344, 1545
NdeII	GATC	8 cut(s)	247, 531, 628, 1068, 1230, 1241, 1287, 1531
NlaIV	GGNNCC	5 cut(s)	538, 763, 826, 835, 1434
NmeAIII	GCCGAG	2 cut(s)	849, 1103
NmuCI	GTSAC	3 cut(s)	448, 864, 1697
NsiI	ATGCAT	1 cut(s)	1447
NspI	RCATGY	2 cut(s)	616, 865
NspV	TTCGAA	1 cut(s)	119
PagI	TCATGA	2 cut(s)	649, 1267
PciI	ACATGT	1 cut(s)	861
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PdmI	GAANNNNTTC	1 cut(s)	890
PfeI	GAWTC	3 cut(s)	17, 32, 104
PfoI	TCCNGGA	1 cut(s)	1323
PinAI	ACCGGT	1 cut(s)	1525
PkrI	GCNGC	7 cut(s)	309, 411, 736, 739, 1057, 1684, 1687
PleI	GAGTC	7 cut(s)	5, 56, 268, 467, 494, 1023, 1499
PluTI	GGCGCC	1 cut(s)	540
PmaCI	CACGTG	1 cut(s)	422
PmlI	CACGTG	1 cut(s)	422
PpsI	GAGTC	7 cut(s)	5, 56, 268, 467, 494, 1023, 1499
Ppu21I	YACGTR	1 cut(s)	422
PpuMI	RGGWCCY	1 cut(s)	824
PscI	ACATGT	1 cut(s)	861
Psp5II	RGGWCCY	1 cut(s)	824
Psp6I	CCWGG	3 cut(s)	764, 1323, 1728
PspCI	CACGTG	1 cut(s)	422
PspGI	CCWGG	3 cut(s)	764, 1323, 1728
PspN4I	GGNNCC	5 cut(s)	538, 763, 826, 835, 1434
PspPI	GGNCC	2 cut(s)	824, 833
PspPPI	RGGWCCY	1 cut(s)	824
PstNI	CAGNNNCTG	1 cut(s)	740
PsuI	RGATCY	2 cut(s)	628, 1241
PvuII	CAGCTG	2 cut(s)	347, 740
RsaI	GTAC	2 cut(s)	552, 1417
RsaNI	GTAC	2 cut(s)	551, 1416
RseI	CAYNNNNRTG	3 cut(s)	572, 1185, 1191
SatI	GCNGC	7 cut(s)	308, 410, 735, 738, 1056, 1683, 1686
Sau3AI	GATC	8 cut(s)	247, 531, 628, 1068, 1230, 1241, 1287, 1531
Sau96I	GGNCC	2 cut(s)	824, 833
SchI	GAGTC	7 cut(s)	5, 56, 269, 467, 494, 1024, 1500
ScrFI	CCNGG	4 cut(s)	381, 766, 1325, 1730
SduI	GDGCHC	4 cut(s)	975, 1573, 1594, 1737
SfaNI	GCATC	1 cut(s)	1454
SfoI	GGCGCC	1 cut(s)	538
SfuI	TTCGAA	1 cut(s)	119
SinI	GGWCC	2 cut(s)	824, 833
SmiMI	CAYNNNNRTG	3 cut(s)	572, 1185, 1191
SmlI	CTYRAG	1 cut(s)	1019
SmoI	CTYRAG	1 cut(s)	1019
Sse9I	AATT	7 cut(s)	115, 546, 679, 814, 940, 1049, 1162
SspDI	GGCGCC	1 cut(s)	536
SspI	AATATT	2 cut(s)	620, 1318
SspMI	CTAG	4 cut(s)	908, 1097, 1221, 1595
StyD4I	CCNGG	4 cut(s)	379, 764, 1323, 1728
StyI	CCWWGG	3 cut(s)	1170, 1344, 1545
TaaI	ACNGT	5 cut(s)	132, 189, 400, 1604, 1652
TaiI	ACGT	1 cut(s)	424
TaqI	TCGA	3 cut(s)	119, 1065, 1573
TasI	AATT	7 cut(s)	115, 546, 679, 814, 940, 1049, 1162
TatI	WGTACW	1 cut(s)	550
TauI	GCSGC	1 cut(s)	412
TfiI	GAWTC	3 cut(s)	17, 32, 104
TscAI	CASTG	4 cut(s)	403, 453, 496, 997
TseFI	GTSAC	3 cut(s)	448, 864, 1697
TseI	GCWGC	6 cut(s)	307, 734, 737, 1055, 1682, 1685
Tsp45I	GTSAC	3 cut(s)	448, 864, 1697
TspDTI	ATGAA	3 cut(s)	704, 1073, 1256
TspGWI	ACGGA	1 cut(s)	846
TspRI	CASTG	4 cut(s)	403, 453, 496, 997
VneI	GTGCAC	1 cut(s)	971
VpaK11BI	GGWCC	2 cut(s)	824, 833
XagI	CCTNNNNNAGG	1 cut(s)	1268
XapI	RAATTY	3 cut(s)	115, 814, 1049
XceI	RCATGY	2 cut(s)	616, 865
XcmI	CCANNNNNNNNNTGG	3 cut(s)	737, 1168, 1209
XmnI	GAANNNNTTC	1 cut(s)	890
XspI	CTAG	4 cut(s)	908, 1097, 1221, 1595
Zsp2I	ATGCAT	1 cut(s)	1447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.