Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0011988

Physical Location & Seq

Genomic Coordinates Forward (+)

12996858 .. 12998846

Gene Structure 1989 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1156000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGAATATCCTCCCTCTCGTATCTGCTATAATTCTCACCATTTTTTGTTGTTCTTGTTTGATTTTTGCTCAGCAGCCCTACGAGGGACAGGCCTTCTCAGATTGTAACAACCCAGAAACTTACTCAAAATCTGTTCTTGGCTACACCTGCAATGGAGCAAGCAAGAGTTGCCAAACATTCCTCACCTTCAGATCCCGGGCGCCTTACAACGCGGTCTCTGCCATCTCCAAACTGCTGGCTTCCGACCCGTCTCCGCTGGCGGAGGTAAATTCGGTTTCTGAGACTGCAACGTTCGAAACCAACAAGTTGGTGATTGTTCCGATTAATTGCTCCTGCTCAGGTGAGTATTATCAGCTAAACACATCTCATGTTGTTGTCAATGGCGATACCTTTTTTATCATTGCGAATAACACATTGCAAGGCCTTTCGACATGTCAAGCTATGTTGAATCAGAATGGTAATCGAACTGCAGAAGACTTGTCTATTGGTGATAGACTCAATGTTCCTCTTAGATGTGCTTGTCCCACAAAGAACCAAACTGATCTAGGTTTCAAGTATCTTTTGACTTACTTAGTTGCCCCAGACGATTATGTTTCATTGATCAGCAATAGATTTGGATCATTTGGTTCAGATACAGGGAGAACTCTCGAAGCTAACGGCCTTCCGGAGCAGGGTTCCACAATTTATTCCTTCAGCACACTCTTAGTTCCTTTGAAGAACCCTCCAAATAATTCTCAAACCGTAGAGCCTCCCTCGTCATCACCATCACCTCCGGCAACACCTCCACCTCCACCTCCACCTCCCTCCAATAACTCAAACAAAACATGGGTTTACGCCCTTGTTGGGGTTCTTGGAGGAGGTGGGCTTGTATTGGTCATAGGCGTTATTATCTTTTGCGTATTTTTCCGCAGAAGTACTAAGAAGGGCTTCGATCCAGTTATCGCCTCAGAGAGCTTTGAGGCACTTGAGAAACCACAAGAGAAGGTGGAGGAAGAAGGATCTCGGGACTTCCTAGAGTCCTTATCTGGCATAGCTCAATCCCTCAAAGTTTACAAATTTGAGGAACTGCAACGCGCAACAGATGGTTTTAGCACTGCTTATTTGATTAAAGGGTCTATTTATCGCGCCAAAATTAATGAGGATTTGGCAGCCATTAAGGAGATGAATGGAGATGTGTCCAAAGAGATAAATTTACTAAAAAAAGTCAGCCATTCCAATATCATTCGCCTCTCTGGAGTTTGTTTTAATGACGGACATTCGTATCTTATCTACGAGTATGCTGTCAATGGACCCTTGAGTGATTGGATTTACAACAGTAGCAATGACGGGAAGTTCCTGAATTGGACACAGAGAATACAGATTATGCTGGATGTGGCCTCAGGGCTTCACTATCTCCACAGCTTCACCACTCCTCCCCATGTCCACAAGGATGTAATGAGCAGTAACATTCTTCTTGACAGCGATTTCAGGGCCAAGATTGCAAACTTCGGTCTAGCAAGGTCAACAGAAGCGCCGGAAGGTGAGTTTTCTTTGACAAATCACATTGTCGGAACAATAGGCTACATGGCTCCTGAGTACTTGGAAAATGGCTTGATATCCCCAAAGCTTGATGTCTACGCATTTGGCGTTCTCATGCTGGAAATACTCACTGGAAAAGAGGTTGCTATGTTTTACGATCTCTTGTCTGATGTTGTAAACTCTGTGCTTAACAACAAAGACGGAGGTCAGAGTTTGAGGGAGTTCATGGATCCTTCTATGCAAGAGAGTTATCCTCCAGAACTTGCTGTGTTCGTGATCAAACTGATTGATAACTGCTTGAACAAAAACCCCGCTGCTCGCCCGGGCATGGAGGAGATTGTACAGCTTCTGTCCAGAACCTTGAGCAATTCACTGAGTTGGGAATTGTCAAGCAACATCTCAGGCTACAAAACTTTAGTGGGAGTTCTTGGTAGTACCGAAACTGGAACAGGATCTCATTCAACTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002237 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046677 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0070887 GO:0071216 GO:0071219 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0098542 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

663

Amino Acids

72.18

Weight (kDa)

5.11

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	56 - 112	1.1e-17	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	116 - 171	1.6e-21	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	186 - 238	7.1e-14	LYK4/5 LysM3 domain
Pkinase	PF00069	372 - 621	3.4e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	387 - 623	2.7e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23770
fragaria_vesca	FvH4_1g14190
malus_domestica	MD02G1156000.v1.1
prunus_persica	Prupe.7G147600_v2.0.a1
pyrus_communis	pycom02g12330
rosa_chinensis	RchiOBHm_Chr2g0102861
rosa_laevigata	RLG00000017185
rosa_multiflora	Rmu_sc0000388.1_g000048 Rmu_sc0000388.1_g000056 Rmu_sc0000388.1_g000057 Rmu_sc0006537.1_g000006
rosa_roxburghii	Rroxscaffold_2G00140240
rosa_rugosa	Rorug02G0110200
rosa_samantha	Rh2AG158600 Rh2BG165000 Rh2CG164700 Rh2DG163800
rosa_wichuraiana	Rw2G012340 Rw2G012390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	155
Acc36I	ACCTGC	1 cut(s)	155
AccB1I	GGYRCC	1 cut(s)	199
AccI	GTMKAC	1 cut(s)	1614
AccII	CGCG	3 cut(s)	212, 1074, 1125
AccIII	TCCGGA	1 cut(s)	664
AciI	CCGC	5 cut(s)	212, 254, 260, 907, 1830
AclI	AACGTT	1 cut(s)	290
AclWI	GGATC	7 cut(s)	186, 625, 926, 1006, 1742, 1755, 1978
AcsI	RAATTY	3 cut(s)	268, 1055, 1189
AcuI	CTGAAG	2 cut(s)	172, 676
AcyI	GRCGYC	1 cut(s)	200
AfaI	GTAC	4 cut(s)	916, 1577, 1860, 1954
AfiI	CCNNNNNNNGG	5 cut(s)	83, 671, 843, 844, 1846
AflIII	ACRYGT	1 cut(s)	431
AgsI	TTSAA	5 cut(s)	448, 553, 715, 1819, 1980
AluBI	AGCT	8 cut(s)	355, 440, 653, 954, 1034, 1401, 1606, 1864
AluI	AGCT	8 cut(s)	355, 440, 653, 954, 1034, 1401, 1606, 1864
Alw26I	GTCTC	3 cut(s)	220, 255, 275
AlwI	GGATC	7 cut(s)	186, 625, 926, 1006, 1742, 1755, 1978
AlwNI	CAGNNNCTG	1 cut(s)	1867
Ama87I	CYCGRG	3 cut(s)	195, 1002, 1840
Aor13HI	TCCGGA	1 cut(s)	664
AoxI	GGCC	5 cut(s)	90, 421, 658, 1374, 1470
ApeKI	GCWGC	3 cut(s)	73, 1148, 1832
ApoI	RAATTY	3 cut(s)	268, 1055, 1189
AseI	ATTAAT	2 cut(s)	324, 1134
Asp700I	GAANNNNTTC	1 cut(s)	926
AspLEI	GCGC	4 cut(s)	202, 1076, 1127, 1513
AspS9I	GGNCC	2 cut(s)	1289, 1470
AsuC2I	CCSGG	4 cut(s)	196, 197, 1841, 1842
AsuHPI	GGTGA	9 cut(s)	28, 175, 322, 353, 500, 753, 759, 1396, 1532
AsuII	TTCGAA	1 cut(s)	294
AvaI	CYCGRG	3 cut(s)	195, 1002, 1840
AvaII	GGWCC	1 cut(s)	1289
AxyI	CCTNAGG	1 cut(s)	1378
BaeI	ACNNNNGTAYC	2 cut(s)	1244, 1277
BamHI	GGATCC	1 cut(s)	1747
BanI	GGYRCC	1 cut(s)	199
BbsI	GAAGAC	1 cut(s)	480
BbvI	GCAGC	3 cut(s)	85, 1160, 1819
BccI	CCATC	3 cut(s)	230, 772, 1076
BceAI	ACGGC	1 cut(s)	673
BclI	TGATCA	2 cut(s)	600, 1794
BcnI	CCSGG	4 cut(s)	196, 197, 1841, 1842
BcoDI	GTCTC	3 cut(s)	220, 255, 275
BfaI	CTAG	3 cut(s)	545, 1013, 1493
BfmI	CTRYAG	1 cut(s)	468
BfoI	RGCGCY	2 cut(s)	203, 1514
BfuAI	ACCTGC	1 cut(s)	155
BisI	GCNGC	3 cut(s)	74, 1149, 1833
BlpI	GCTNAGC	1 cut(s)	69
BlsI	GCNGC	3 cut(s)	75, 1150, 1834
BmcAI	AGTACT	2 cut(s)	916, 1577
Bme1390I	CCNGG	4 cut(s)	196, 197, 1841, 1842
Bme18I	GGWCC	1 cut(s)	1289
BmeT110I	CYCGRG	3 cut(s)	195, 1002, 1840
BmgT120I	GGNCC	2 cut(s)	1289, 1470
BmiI	GGNNCC	5 cut(s)	201, 676, 1291, 1569, 1749
BmrFI	CCNGG	4 cut(s)	196, 197, 1841, 1842
BoxI	GACNNNNGTC	1 cut(s)	1722
BpiI	GAAGAC	1 cut(s)	480
BplI	GAGNNNNNCTC	4 cut(s)	737, 769, 1756, 1788
BpmI	CTGGAG	2 cut(s)	1254, 1758
Bpu10I	CCTNAGC	1 cut(s)	337
Bpu1102I	GCTNAGC	1 cut(s)	69
Bpu14I	TTCGAA	1 cut(s)	294
BpuEI	CTTGAG	3 cut(s)	986, 1315, 1900
BpuMI	CCSGG	4 cut(s)	196, 197, 1841, 1842
BsaBI	GATNNNNATC	1 cut(s)	616
BsaHI	GRCGYC	1 cut(s)	200
BsaI	GGTCTC	1 cut(s)	220
BsaJI	CCNNGG	2 cut(s)	195, 1840
BsaWI	WCCGGW	1 cut(s)	664
BsaXI	ACNNNNNCTCC	2 cut(s)	1396, 1426
Bsc4I	CCNNNNNNNGG	5 cut(s)	83, 671, 843, 844, 1846
Bse1I	ACTGG	3 cut(s)	935, 1654, 1966
Bse21I	CCTNAGG	1 cut(s)	1378
Bse3DI	GCAATG	4 cut(s)	157, 399, 413, 1327
Bse8I	GATNNNNATC	1 cut(s)	616
BseAI	TCCGGA	1 cut(s)	664
BseDI	CCNNGG	2 cut(s)	195, 1840
BseGI	GGATG	2 cut(s)	1375, 1435
BseJI	GATNNNNATC	1 cut(s)	616
BseLI	CCNNNNNNNGG	5 cut(s)	83, 671, 843, 844, 1846
BseMI	GCAATG	4 cut(s)	157, 399, 413, 1327
BseMII	CTCAG	9 cut(s)	83, 111, 270, 351, 960, 1392, 1563, 1883, 1932
BseNI	ACTGG	3 cut(s)	935, 1654, 1966
BseRI	GAGGAG	3 cut(s)	870, 1401, 1865
BseXI	GCAGC	3 cut(s)	85, 1160, 1819
Bsh1236I	CGCG	3 cut(s)	212, 1074, 1125
BshFI	GGCC	5 cut(s)	92, 423, 660, 1376, 1472
BshNI	GGYRCC	1 cut(s)	199
BsiHKCI	CYCGRG	3 cut(s)	195, 1002, 1840
BsiSI	CCGG	5 cut(s)	196, 665, 773, 1514, 1841
BslFI	GGGAC	3 cut(s)	99, 507, 1019
BslI	CCNNNNNNNGG	5 cut(s)	83, 671, 843, 844, 1846
BsmAI	GTCTC	3 cut(s)	220, 255, 275
BsmBI	CGTCTC	1 cut(s)	255
BsmFI	GGGAC	3 cut(s)	99, 507, 1019
BsnI	GGCC	5 cut(s)	92, 423, 660, 1376, 1472
Bso31I	GGTCTC	1 cut(s)	220
BsoBI	CYCGRG	3 cut(s)	195, 1002, 1840
Bsp119I	TTCGAA	1 cut(s)	294
Bsp13I	TCCGGA	1 cut(s)	664
Bsp1407I	TGTACA	1 cut(s)	1858
Bsp1720I	GCTNAGC	1 cut(s)	69
BspACI	CCGC	5 cut(s)	212, 254, 260, 907, 1830
BspANI	GGCC	5 cut(s)	92, 423, 660, 1376, 1472
BspCNI	CTCAG	9 cut(s)	82, 110, 271, 350, 959, 1391, 1564, 1884, 1931
BspEI	TCCGGA	1 cut(s)	664
BspFNI	CGCG	3 cut(s)	212, 1074, 1125
BspLI	GGNNCC	5 cut(s)	201, 676, 1291, 1569, 1749
BspMAI	CTGCAG	1 cut(s)	472
BspMI	ACCTGC	1 cut(s)	155
BspPI	GGATC	7 cut(s)	186, 625, 926, 1006, 1742, 1755, 1978
BspT104I	TTCGAA	1 cut(s)	294
BspT107I	GGYRCC	1 cut(s)	199
BspTNI	GGTCTC	1 cut(s)	220
BsrDI	GCAATG	4 cut(s)	157, 399, 413, 1327
BsrGI	TGTACA	1 cut(s)	1858
BsrI	ACTGG	3 cut(s)	935, 1654, 1966
BssECI	CCNNGG	2 cut(s)	195, 1840
BssNI	GRCGYC	1 cut(s)	200
Bst4CI	ACNGT	2 cut(s)	742, 1316
BstACI	GRCGYC	1 cut(s)	200
BstAPI	GCANNNNNTGC	1 cut(s)	168
BstAUI	TGTACA	1 cut(s)	1858
BstBI	TTCGAA	1 cut(s)	294
BstC8I	GCNNGC	4 cut(s)	160, 237, 258, 1837
BstF5I	GGATG	2 cut(s)	1375, 1435
BstFNI	CGCG	3 cut(s)	212, 1074, 1125
BstH2I	RGCGCY	2 cut(s)	203, 1514
BstHHI	GCGC	4 cut(s)	202, 1076, 1127, 1513
BstMAI	GTCTC	3 cut(s)	220, 255, 275
BstMWI	GCNNNNNNNGC	4 cut(s)	147, 168, 218, 1478
BstNSI	RCATGY	1 cut(s)	435
BstPAI	GACNNNNGTC	1 cut(s)	1722
BstSCI	CCNGG	4 cut(s)	194, 195, 1839, 1840
BstSFI	CTRYAG	1 cut(s)	468
BstUI	CGCG	3 cut(s)	212, 1074, 1125
BstV1I	GCAGC	3 cut(s)	85, 1160, 1819
BstV2I	GAAGAC	1 cut(s)	480
BstX2I	RGATCY	4 cut(s)	191, 998, 1747, 1970
BstXI	CCANNNNNNTGG	2 cut(s)	235, 307
BstYI	RGATCY	4 cut(s)	191, 998, 1747, 1970
Bsu36I	CCTNAGG	1 cut(s)	1378
BsuRI	GGCC	5 cut(s)	92, 423, 660, 1376, 1472
BtsCI	GGATG	2 cut(s)	1375, 1435
BtsI	GCAGTG	1 cut(s)	1092
BtsIMutI	CAGTG	3 cut(s)	1092, 1647, 1889
BveI	ACCTGC	1 cut(s)	155
Cac8I	GCNNGC	4 cut(s)	160, 237, 258, 1837
CaiI	CAGNNNCTG	1 cut(s)	1867
CfoI	GCGC	4 cut(s)	202, 1076, 1127, 1513
Cfr13I	GGNCC	2 cut(s)	1289, 1470
Cfr9I	CCCGGG	2 cut(s)	195, 1840
Csp6I	GTAC	4 cut(s)	915, 1576, 1859, 1953
CviAII	CATG	8 cut(s)	368, 432, 825, 1418, 1564, 1633, 1744, 1846
CviQI	GTAC	4 cut(s)	915, 1576, 1859, 1953
DinI	GGCGCC	1 cut(s)	201
EciI	GGCGGA	1 cut(s)	275
Eco147I	AGGCCT	2 cut(s)	92, 423
Eco31I	GGTCTC	1 cut(s)	220
Eco32I	GATATC	1 cut(s)	1596
Eco47I	GGWCC	1 cut(s)	1289
Eco57I	CTGAAG	2 cut(s)	172, 676
Eco81I	CCTNAGG	1 cut(s)	1378
Eco88I	CYCGRG	3 cut(s)	195, 1002, 1840
EcoRV	GATATC	1 cut(s)	1596
EgeI	GGCGCC	1 cut(s)	201
EheI	GGCGCC	1 cut(s)	201
Esp3I	CGTCTC	1 cut(s)	255
FaeI	CATG	8 cut(s)	371, 435, 828, 1421, 1567, 1636, 1747, 1849
FalI	AAGNNNNNCTT	2 cut(s)	911, 943
FaqI	GGGAC	3 cut(s)	99, 507, 1019
FatI	CATG	8 cut(s)	367, 431, 824, 1417, 1563, 1632, 1743, 1845
FauI	CCCGC	1 cut(s)	1837
FbaI	TGATCA	2 cut(s)	600, 1794
FblI	GTMKAC	1 cut(s)	1614
Fnu4HI	GCNGC	3 cut(s)	74, 1149, 1833
FokI	GGATG	2 cut(s)	1382, 1442
Fsp4HI	GCNGC	3 cut(s)	74, 1149, 1833
FspBI	CTAG	3 cut(s)	545, 1013, 1493
GlaI	GCGC	4 cut(s)	201, 1075, 1126, 1512
GluI	GCNGC	3 cut(s)	74, 1149, 1833
GsuI	CTGGAG	2 cut(s)	1254, 1758
HaeII	RGCGCY	2 cut(s)	203, 1514
HaeIII	GGCC	5 cut(s)	92, 423, 660, 1376, 1472
HapII	CCGG	5 cut(s)	196, 665, 773, 1514, 1841
HhaI	GCGC	4 cut(s)	202, 1076, 1127, 1513
Hin1I	GRCGYC	1 cut(s)	200
Hin1II	CATG	8 cut(s)	371, 435, 828, 1421, 1567, 1636, 1747, 1849
Hin6I	GCGC	4 cut(s)	200, 1074, 1125, 1511
HinP1I	GCGC	4 cut(s)	200, 1074, 1125, 1511
HincII	GTYRAC	1 cut(s)	1503
HindII	GTYRAC	1 cut(s)	1503
HindIII	AAGCTT	1 cut(s)	1604
HinfI	GANTC	3 cut(s)	448, 495, 1016
HpaII	CCGG	5 cut(s)	196, 665, 773, 1514, 1841
HphI	GGTGA	9 cut(s)	28, 175, 322, 353, 500, 753, 759, 1396, 1532
Hpy166II	GTNNAC	6 cut(s)	832, 1051, 1423, 1503, 1615, 1696
Hpy8I	GTNNAC	6 cut(s)	832, 1051, 1423, 1503, 1615, 1696
HpyAV	CCTTC	9 cut(s)	103, 196, 671, 700, 916, 976, 989, 1511, 1761
HpyCH4III	ACNGT	2 cut(s)	742, 1316
HpyCH4IV	ACGT	1 cut(s)	290
HpyCH4V	TGCA	7 cut(s)	150, 287, 418, 470, 1069, 1481, 1759
HpyF10VI	GCNNNNNNNGC	4 cut(s)	147, 168, 218, 1478
HpySE526I	ACGT	1 cut(s)	290
Hsp92I	GRCGYC	1 cut(s)	200
Hsp92II	CATG	8 cut(s)	371, 435, 828, 1421, 1567, 1636, 1747, 1849
HspAI	GCGC	4 cut(s)	200, 1074, 1125, 1511
KasI	GGCGCC	1 cut(s)	199
Kpn2I	TCCGGA	1 cut(s)	664
Ksp22I	TGATCA	2 cut(s)	600, 1794
LmnI	GCTCC	4 cut(s)	155, 335, 667, 1573
Lsp1109I	GCAGC	3 cut(s)	85, 1160, 1819
MaeI	CTAG	3 cut(s)	545, 1013, 1493
MaeII	ACGT	1 cut(s)	290
MaeIII	GTNAC	2 cut(s)	104, 1442
MboII	GAAGA	4 cut(s)	485, 727, 1004, 1442
MflI	RGATCY	4 cut(s)	191, 998, 1747, 1970
Mly113I	GGCGCC	1 cut(s)	200
MlyI	GAGTC	2 cut(s)	489, 1025
MmeI	TCCRAC	2 cut(s)	267, 1528
MroI	TCCGGA	1 cut(s)	664
MroXI	GAANNNNTTC	1 cut(s)	926
MseI	TTAA	6 cut(s)	324, 1107, 1134, 1155, 1245, 1707
MslI	CAYNNNNRTG	1 cut(s)	1428
MspA1I	CMGCKG	2 cut(s)	256, 1832
MspI	CCGG	5 cut(s)	196, 665, 773, 1514, 1841
MspR9I	CCNGG	4 cut(s)	196, 197, 1841, 1842
MvnI	CGCG	3 cut(s)	212, 1074, 1125
MwoI	GCNNNNNNNGC	4 cut(s)	147, 168, 218, 1478
NarI	GGCGCC	1 cut(s)	200
NciI	CCSGG	4 cut(s)	196, 197, 1841, 1842
NlaIII	CATG	8 cut(s)	371, 435, 828, 1421, 1567, 1636, 1747, 1849
NlaIV	GGNNCC	5 cut(s)	201, 676, 1291, 1569, 1749
NspI	RCATGY	1 cut(s)	435
NspV	TTCGAA	1 cut(s)	294
PaqCI	CACCTGC	1 cut(s)	155
PceI	AGGCCT	2 cut(s)	92, 423
PciI	ACATGT	1 cut(s)	431
PcsI	WCGNNNNNNNCGW	1 cut(s)	1623
PdmI	GAANNNNTTC	1 cut(s)	926
PfeI	GAWTC	1 cut(s)	448
PkrI	GCNGC	3 cut(s)	75, 1150, 1834
PleI	GAGTC	2 cut(s)	489, 1024
PluTI	GGCGCC	1 cut(s)	203
PpsI	GAGTC	2 cut(s)	489, 1024
PscI	ACATGT	1 cut(s)	431
PshAI	GACNNNNGTC	1 cut(s)	1722
PshBI	ATTAAT	2 cut(s)	324, 1134
Psp1406I	AACGTT	1 cut(s)	290
PspN4I	GGNNCC	5 cut(s)	201, 676, 1291, 1569, 1749
PspPI	GGNCC	2 cut(s)	1289, 1470
PstI	CTGCAG	1 cut(s)	472
PstNI	CAGNNNCTG	1 cut(s)	1867
PsuI	RGATCY	4 cut(s)	191, 998, 1747, 1970
RsaI	GTAC	4 cut(s)	916, 1577, 1860, 1954
RsaNI	GTAC	4 cut(s)	915, 1576, 1859, 1953
RseI	CAYNNNNRTG	1 cut(s)	1428
SaqAI	TTAA	6 cut(s)	324, 1107, 1134, 1155, 1245, 1707
SatI	GCNGC	3 cut(s)	74, 1149, 1833
Sau96I	GGNCC	2 cut(s)	1289, 1470
ScaI	AGTACT	2 cut(s)	916, 1577
SchI	GAGTC	2 cut(s)	489, 1025
ScrFI	CCNGG	4 cut(s)	196, 197, 1841, 1842
SfcI	CTRYAG	1 cut(s)	468
SfoI	GGCGCC	1 cut(s)	201
SfuI	TTCGAA	1 cut(s)	294
SinI	GGWCC	1 cut(s)	1289
SmaI	CCCGGG	2 cut(s)	197, 1842
SmiMI	CAYNNNNRTG	1 cut(s)	1428
SmlI	CTYRAG	3 cut(s)	965, 1294, 1879
SmoI	CTYRAG	3 cut(s)	965, 1294, 1879
SrfI	GCCCGGGC	1 cut(s)	1842
SseBI	AGGCCT	2 cut(s)	92, 423
SsiI	CCGC	5 cut(s)	212, 254, 260, 907, 1830
SspDI	GGCGCC	1 cut(s)	199
SspMI	CTAG	3 cut(s)	545, 1013, 1493
StuI	AGGCCT	2 cut(s)	92, 423
StyD4I	CCNGG	4 cut(s)	194, 195, 1839, 1840
TaaI	ACNGT	2 cut(s)	742, 1316
TaiI	ACGT	1 cut(s)	293
TaqI	TCGA	5 cut(s)	294, 428, 463, 648, 930
TaqII	GACCGA	1 cut(s)	1478
TatI	WGTACW	3 cut(s)	914, 1575, 1858
TfiI	GAWTC	1 cut(s)	448
Tru1I	TTAA	6 cut(s)	324, 1107, 1134, 1155, 1245, 1707
Tru9I	TTAA	6 cut(s)	324, 1107, 1134, 1155, 1245, 1707
TscAI	CASTG	3 cut(s)	1099, 1654, 1896
TseI	GCWGC	3 cut(s)	73, 1148, 1832
TspDTI	ATGAA	4 cut(s)	17, 585, 1178, 1732
TspGWI	ACGGA	2 cut(s)	1266, 1734
TspMI	CCCGGG	2 cut(s)	195, 1840
TspRI	CASTG	3 cut(s)	1099, 1654, 1896
VpaK11BI	GGWCC	1 cut(s)	1289
VspI	ATTAAT	2 cut(s)	324, 1134
XapI	RAATTY	3 cut(s)	268, 1055, 1189
XceI	RCATGY	1 cut(s)	435
XmaI	CCCGGG	2 cut(s)	195, 1840
XmiI	GTMKAC	1 cut(s)	1614
XmnI	GAANNNNTTC	1 cut(s)	926
XspI	CTAG	3 cut(s)	545, 1013, 1493
ZrmI	AGTACT	2 cut(s)	916, 1577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.