Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0011988

Physical Location & Seq

Genomic Coordinates Forward (+)

8891403 .. 8893391

Gene Structure 1989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g12330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGAATATCCTCCCTCTCGTATCTGCTATAATTCTCACCATTTTTTGTTGCTCTTGTTTGATTTTTGCTCAGCAGCCTTACGAGGGACAGGCCTTCTCAGATTGTCACAACCCAGAAACTTACTCAAAATCTGTTCTTGGCTACACCTGCAATGGAGCAAGCAAGAGTTGCCAATCATTCCTCACCTTCAGATCCCGAGCGCCTTACAACACGGTCTCTTCCATATCCAGTATGCTGGCTTCCGACCCGTCTCAGCTGGCGGAGATCAATTCGGTTTCTGAGACTGCAACGTTCGAAACCAATAAGTTGGTGATTGTTCCGATTAATTGCTCCTGCTCAGGTGAGTACTATCAGCTAAACACATCTCATGTTGTTGTCCATGGCGATACCATTTTTATCATTGCGAATAACACATTGCAAGGCCTTTCGACATGTCAAGCTATGTTGAGTCAGAATGCTAATCGAACTACAAAAGACTTGTATACTGGTAATAGACTCAATGTTCCTCTTAGATGTGCTTGTCCCACAAAGAACCAAACTGATCTAGGTTTTAAGTATCTTTTGACTTACTTAGTCGCCCCAGGCGATTATGTTTCATTGATCAGCAATAGATTTGGACCATTTGGTTCAGATACAGGGAGAACTCTCGAAGCTAACGGCCTTTCGGAGCAGGATTCCACAATTTTTTCCTTCAGCACACTCTTAGTTCCTTTGAAAAACCCTCCAAATAGTTCTCAAATTGTAGAGCCTCCCTCGTCATCACCATCACCTCCGGCAACACCTCCACCTGCCTCCAATAACTCAAACAAAACATGGGTTTACGCCCTTGTTGGGGCTCTTGGAGGAGGTGGGCTTGTATTAGTCATAGGCGTTATTATCTTCTGTGCATTTTTCCGCAGAAGTACTAAGAAGGGCTTCGATCCAGTTATCGCCTCAGAGAGCTTTGAGGCACTTGAGAAATCACAAGAGAAGAAGGTGGAGGAAGAAGGATCTCGGGACTTCTTAGAGTCCTTATCTGGCATAGCTCAATCCCTCAAAGTTTACAAATTTGAGGAACTGCAACGCGCAACAGATGGTTTTAGCACTGCTTATTTGATTAAAGGGTCTATTTATCGCGCCAAAATTAATGAGGATTTGGCAGCCATTAAGGAGATGAATGGAGATGTGTCCAAAGAGATTAATTTACTAAAAAAAATCAGCCATTCCAATATCATTCGCCTCTCTGGAGTTTGCTTTAATGATGGACATTCGTATCTTATCTACGAGTATGCTGTCAATGGACCCTTGAGTGATTGGATTTACAACAGTAGCAATGACGGGAAGTTCCTGAATTGGACACAGAGAATACAGATTATGCTGGATGTGGCCTCAGGGCTTCACTATCTCCACAGCTTCACAACTCCTCCCCATGTCCACAAGGATGTAATGAGCAGTAACATTCTTCTTGACAGTGATTTCAGGGCCAAGATTGCAAACTTCGGTCTAGCAAGGTCAACAGAAGCGCCGGAAGGTGAGTTTTCTTTGACAAATCACATTGTCGGAACAATAGGCTTCATGGCTCCTGAGTACTTGGAAAATGGCCTGATATCCCCAAAGCTTGATGTCTACGCATTTGGCGTTCTCATGCTGGAAATACTCACTGGAAAAGAGGTTGCTATGTTTTACGAAAAGAATATTCTCTTGTCTGATGTTGTAAACTCTGTGCTTAACAACAAAGACGGAGGTCAGAGTTTGAGGGAGTTCATGGATCCTTCTATGCAAGAGAGTTATCCTCCAGAACTTGCTGTGTTCGTGATCAAACTGATTGATAACTGCTTGAACAAAAACCCCACTGCTCGCCCGGGCATGGAGGAGATTGTACAGTTTCTGTCAAGAACCATGAGCAATTCACTGAGTTGGGAATTGTCAAGCAACGTCTCAGGCTACCAAACTTTAGTGGGAGTTCTTGGTAGTACCGAAACTGGAACAGGATCTCATTCAACTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002237 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046677 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0070887 GO:0071216 GO:0071219 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071944 GO:0097367 GO:0098542 GO:0140096 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

663

Amino Acids

72.38

Weight (kDa)

5.37

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	56 - 112	2e-18	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	116 - 171	4.1e-21	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	186 - 238	1.7e-15	LYK4/5 LysM3 domain
Pkinase	PF00069	369 - 621	5.3e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	384 - 623	4.7e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23770
fragaria_vesca	FvH4_1g14190
malus_domestica	MD02G1156000.v1.1
prunus_persica	Prupe.7G147600_v2.0.a1
pyrus_communis	pycom02g12330
rosa_chinensis	RchiOBHm_Chr2g0102861
rosa_laevigata	RLG00000017185
rosa_multiflora	Rmu_sc0000388.1_g000048 Rmu_sc0000388.1_g000056 Rmu_sc0000388.1_g000057 Rmu_sc0006537.1_g000006
rosa_roxburghii	Rroxscaffold_2G00140240
rosa_rugosa	Rorug02G0110200
rosa_samantha	Rh2AG158600 Rh2BG165000 Rh2CG164700 Rh2DG163800
rosa_wichuraiana	Rw2G012340 Rw2G012390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	155, 796
Acc36I	ACCTGC	2 cut(s)	155, 796
AccI	GTMKAC	2 cut(s)	482, 1605
AccII	CGCG	2 cut(s)	1065, 1116
AciI	CCGC	2 cut(s)	260, 895
AclI	AACGTT	1 cut(s)	290
AclWI	GGATC	6 cut(s)	186, 914, 997, 1742, 1755, 1978
AcsI	RAATTY	1 cut(s)	1046
AcuI	CTGAAG	2 cut(s)	172, 676
AfaI	GTAC	5 cut(s)	347, 904, 1568, 1860, 1954
AfiI	CCNNNNNNNGG	4 cut(s)	83, 831, 832, 1846
AflIII	ACRYGT	1 cut(s)	431
AgsI	TTSAA	3 cut(s)	715, 1819, 1980
AjnI	CCWGG	1 cut(s)	580
AluBI	AGCT	8 cut(s)	256, 355, 440, 653, 942, 1025, 1392, 1597
AluI	AGCT	8 cut(s)	256, 355, 440, 653, 942, 1025, 1392, 1597
Alw26I	GTCTC	4 cut(s)	220, 255, 275, 1921
AlwI	GGATC	6 cut(s)	186, 914, 997, 1742, 1755, 1978
AlwNI	CAGNNNCTG	1 cut(s)	1867
Ama87I	CYCGRG	3 cut(s)	195, 993, 1840
AoxI	GGCC	6 cut(s)	90, 421, 658, 1365, 1461, 1579
ApeKI	GCWGC	2 cut(s)	73, 1139
ApoI	RAATTY	1 cut(s)	1046
AseI	ATTAAT	3 cut(s)	324, 1125, 1179
Asp700I	GAANNNNTTC	1 cut(s)	914
AspLEI	GCGC	4 cut(s)	202, 1067, 1118, 1504
AspS9I	GGNCC	3 cut(s)	617, 1280, 1461
AsuC2I	CCSGG	2 cut(s)	1841, 1842
AsuHPI	GGTGA	7 cut(s)	28, 175, 322, 353, 753, 759, 1523
AsuII	TTCGAA	1 cut(s)	294
AvaI	CYCGRG	3 cut(s)	195, 993, 1840
AvaII	GGWCC	2 cut(s)	617, 1280
AxyI	CCTNAGG	1 cut(s)	1369
BaeI	ACNNNNGTAYC	2 cut(s)	1235, 1268
BamHI	GGATCC	1 cut(s)	1747
BanII	GRGCYC	1 cut(s)	838
BarI	GAAGNNNNNNTAC	2 cut(s)	223, 255
BbvI	GCAGC	2 cut(s)	85, 1151
BccI	CCATC	3 cut(s)	772, 1067, 1235
BceAI	ACGGC	1 cut(s)	673
BciT130I	CCWGG	1 cut(s)	582
BclI	TGATCA	2 cut(s)	600, 1794
BcnI	CCSGG	2 cut(s)	1841, 1842
BcoDI	GTCTC	4 cut(s)	220, 255, 275, 1921
BfaI	CTAG	2 cut(s)	545, 1484
BfoI	RGCGCY	2 cut(s)	203, 1505
BfuAI	ACCTGC	2 cut(s)	155, 796
BisI	GCNGC	2 cut(s)	74, 1140
BlpI	GCTNAGC	1 cut(s)	69
BlsI	GCNGC	2 cut(s)	75, 1141
BmcAI	AGTACT	3 cut(s)	347, 904, 1568
Bme1390I	CCNGG	3 cut(s)	582, 1841, 1842
Bme18I	GGWCC	2 cut(s)	617, 1280
BmeT110I	CYCGRG	3 cut(s)	195, 993, 1840
BmgT120I	GGNCC	3 cut(s)	617, 1280, 1461
BmiI	GGNNCC	3 cut(s)	1282, 1560, 1749
BmrFI	CCNGG	3 cut(s)	582, 1841, 1842
BoxI	GACNNNNGTC	1 cut(s)	1722
BplI	GAGNNNNNCTC	4 cut(s)	737, 769, 1756, 1788
BpmI	CTGGAG	2 cut(s)	1245, 1758
Bpu10I	CCTNAGC	1 cut(s)	337
Bpu1102I	GCTNAGC	1 cut(s)	69
Bpu14I	TTCGAA	1 cut(s)	294
BpuEI	CTTGAG	2 cut(s)	974, 1306
BpuMI	CCSGG	2 cut(s)	1841, 1842
BsaI	GGTCTC	1 cut(s)	220
BsaJI	CCNNGG	3 cut(s)	379, 580, 1840
BsaXI	ACNNNNNCTCC	2 cut(s)	1387, 1417
Bsc4I	CCNNNNNNNGG	4 cut(s)	83, 831, 832, 1846
Bse1I	ACTGG	5 cut(s)	228, 490, 923, 1645, 1966
Bse21I	CCTNAGG	1 cut(s)	1369
Bse3DI	GCAATG	4 cut(s)	157, 399, 413, 1318
BseBI	CCWGG	1 cut(s)	582
BseDI	CCNNGG	3 cut(s)	379, 580, 1840
BseGI	GGATG	2 cut(s)	1366, 1426
BseLI	CCNNNNNNNGG	4 cut(s)	83, 831, 832, 1846
BseMI	GCAATG	4 cut(s)	157, 399, 413, 1318
BseNI	ACTGG	5 cut(s)	228, 490, 923, 1645, 1966
BseRI	GAGGAG	3 cut(s)	858, 1392, 1865
BseXI	GCAGC	2 cut(s)	85, 1151
Bsh1236I	CGCG	2 cut(s)	1065, 1116
BshFI	GGCC	6 cut(s)	92, 423, 660, 1367, 1463, 1581
BsiHKCI	CYCGRG	3 cut(s)	195, 993, 1840
BsiSI	CCGG	3 cut(s)	773, 1505, 1841
BslFI	GGGAC	3 cut(s)	99, 507, 1010
BslI	CCNNNNNNNGG	4 cut(s)	83, 831, 832, 1846
BsmAI	GTCTC	4 cut(s)	220, 255, 275, 1921
BsmBI	CGTCTC	2 cut(s)	255, 1921
BsmFI	GGGAC	3 cut(s)	99, 507, 1010
BsmI	GAATGC	1 cut(s)	460
BsnI	GGCC	6 cut(s)	92, 423, 660, 1367, 1463, 1581
Bso31I	GGTCTC	1 cut(s)	220
BsoBI	CYCGRG	3 cut(s)	195, 993, 1840
Bsp119I	TTCGAA	1 cut(s)	294
Bsp1286I	GDGCHC	1 cut(s)	838
Bsp1407I	TGTACA	1 cut(s)	1858
Bsp143I	GATC	9 cut(s)	191, 264, 541, 600, 919, 989, 1747, 1794, 1970
Bsp1720I	GCTNAGC	1 cut(s)	69
Bsp19I	CCATGG	1 cut(s)	379
BspACI	CCGC	2 cut(s)	260, 895
BspANI	GGCC	6 cut(s)	92, 423, 660, 1367, 1463, 1581
BspFNI	CGCG	2 cut(s)	1065, 1116
BspLI	GGNNCC	3 cut(s)	1282, 1560, 1749
BspMI	ACCTGC	2 cut(s)	155, 796
BspPI	GGATC	6 cut(s)	186, 914, 997, 1742, 1755, 1978
BspT104I	TTCGAA	1 cut(s)	294
BspTNI	GGTCTC	1 cut(s)	220
BsrDI	GCAATG	4 cut(s)	157, 399, 413, 1318
BsrGI	TGTACA	1 cut(s)	1858
BsrI	ACTGG	5 cut(s)	228, 490, 923, 1645, 1966
BssECI	CCNNGG	3 cut(s)	379, 580, 1840
BssMI	GATC	9 cut(s)	191, 264, 541, 600, 919, 989, 1747, 1794, 1970
BssNAI	GTATAC	1 cut(s)	483
BssT1I	CCWWGG	1 cut(s)	379
Bst1107I	GTATAC	1 cut(s)	483
Bst2UI	CCWGG	1 cut(s)	582
Bst4CI	ACNGT	4 cut(s)	214, 1307, 1451, 1863
Bst6I	CTCTTC	1 cut(s)	223
BstAPI	GCANNNNNTGC	1 cut(s)	168
BstAUI	TGTACA	1 cut(s)	1858
BstBI	TTCGAA	1 cut(s)	294
BstC8I	GCNNGC	4 cut(s)	160, 237, 258, 1837
BstDSI	CCRYGG	1 cut(s)	379
BstF5I	GGATG	2 cut(s)	1366, 1426
BstFNI	CGCG	2 cut(s)	1065, 1116
BstH2I	RGCGCY	2 cut(s)	203, 1505
BstHHI	GCGC	4 cut(s)	202, 1067, 1118, 1504
BstKTI	GATC	9 cut(s)	194, 267, 544, 603, 922, 992, 1750, 1797, 1973
BstMAI	GTCTC	4 cut(s)	220, 255, 275, 1921
BstMBI	GATC	9 cut(s)	191, 264, 541, 600, 919, 989, 1747, 1794, 1970
BstMWI	GCNNNNNNNGC	3 cut(s)	147, 168, 1469
BstNI	CCWGG	1 cut(s)	582
BstNSI	RCATGY	1 cut(s)	435
BstPAI	GACNNNNGTC	1 cut(s)	1722
BstSCI	CCNGG	3 cut(s)	580, 1839, 1840
BstUI	CGCG	2 cut(s)	1065, 1116
BstV1I	GCAGC	2 cut(s)	85, 1151
BstX2I	RGATCY	4 cut(s)	191, 989, 1747, 1970
BstXI	CCANNNNNNTGG	2 cut(s)	235, 307
BstYI	RGATCY	4 cut(s)	191, 989, 1747, 1970
BstZ17I	GTATAC	1 cut(s)	483
Bsu36I	CCTNAGG	1 cut(s)	1369
BsuRI	GGCC	6 cut(s)	92, 423, 660, 1367, 1463, 1581
BtgI	CCRYGG	1 cut(s)	379
BtsCI	GGATG	2 cut(s)	1366, 1426
BtsI	GCAGTG	2 cut(s)	1083, 1830
BtsIMutI	CAGTG	5 cut(s)	1083, 1456, 1638, 1830, 1889
BveI	ACCTGC	2 cut(s)	155, 796
Cac8I	GCNNGC	4 cut(s)	160, 237, 258, 1837
CaiI	CAGNNNCTG	1 cut(s)	1867
CfoI	GCGC	4 cut(s)	202, 1067, 1118, 1504
Cfr13I	GGNCC	3 cut(s)	617, 1280, 1461
Cfr9I	CCCGGG	1 cut(s)	1840
Csp6I	GTAC	5 cut(s)	346, 903, 1567, 1859, 1953
CviQI	GTAC	5 cut(s)	346, 903, 1567, 1859, 1953
DpnI	GATC	9 cut(s)	193, 266, 543, 602, 921, 991, 1749, 1796, 1972
DpnII	GATC	9 cut(s)	191, 264, 541, 600, 919, 989, 1747, 1794, 1970
Eam1104I	CTCTTC	1 cut(s)	223
EarI	CTCTTC	1 cut(s)	223
EciI	GGCGGA	1 cut(s)	275
Eco130I	CCWWGG	1 cut(s)	379
Eco147I	AGGCCT	2 cut(s)	92, 423
Eco24I	GRGCYC	1 cut(s)	838
Eco31I	GGTCTC	1 cut(s)	220
Eco32I	GATATC	1 cut(s)	1587
Eco47I	GGWCC	2 cut(s)	617, 1280
Eco57I	CTGAAG	2 cut(s)	172, 676
Eco81I	CCTNAGG	1 cut(s)	1369
Eco88I	CYCGRG	3 cut(s)	195, 993, 1840
EcoRII	CCWGG	1 cut(s)	580
EcoRV	GATATC	1 cut(s)	1587
EcoT14I	CCWWGG	1 cut(s)	379
EcoT38I	GRGCYC	1 cut(s)	838
ErhI	CCWWGG	1 cut(s)	379
Esp3I	CGTCTC	2 cut(s)	255, 1921
FalI	AAGNNNNNCTT	2 cut(s)	899, 931
FaqI	GGGAC	3 cut(s)	99, 507, 1010
FbaI	TGATCA	2 cut(s)	600, 1794
FblI	GTMKAC	2 cut(s)	482, 1605
Fnu4HI	GCNGC	2 cut(s)	74, 1140
FokI	GGATG	2 cut(s)	1373, 1433
FriOI	GRGCYC	1 cut(s)	838
Fsp4HI	GCNGC	2 cut(s)	74, 1140
FspBI	CTAG	2 cut(s)	545, 1484
GlaI	GCGC	4 cut(s)	201, 1066, 1117, 1503
GluI	GCNGC	2 cut(s)	74, 1140
GsuI	CTGGAG	2 cut(s)	1245, 1758
HaeII	RGCGCY	2 cut(s)	203, 1505
HaeIII	GGCC	6 cut(s)	92, 423, 660, 1367, 1463, 1581
HapII	CCGG	3 cut(s)	773, 1505, 1841
HhaI	GCGC	4 cut(s)	202, 1067, 1118, 1504
Hin6I	GCGC	4 cut(s)	200, 1065, 1116, 1502
HinP1I	GCGC	4 cut(s)	200, 1065, 1116, 1502
HincII	GTYRAC	1 cut(s)	1494
HindII	GTYRAC	1 cut(s)	1494
HindIII	AAGCTT	1 cut(s)	1595
HinfI	GANTC	4 cut(s)	448, 495, 674, 1007
HpaII	CCGG	3 cut(s)	773, 1505, 1841
HphI	GGTGA	7 cut(s)	28, 175, 322, 353, 753, 759, 1523
Hpy166II	GTNNAC	7 cut(s)	483, 820, 1042, 1414, 1494, 1606, 1696
Hpy8I	GTNNAC	7 cut(s)	483, 820, 1042, 1414, 1494, 1606, 1696
HpyAV	CCTTC	8 cut(s)	103, 196, 700, 904, 967, 980, 1502, 1761
HpyCH4III	ACNGT	4 cut(s)	214, 1307, 1451, 1863
HpyCH4IV	ACGT	2 cut(s)	290, 1914
HpyCH4V	TGCA	7 cut(s)	150, 287, 418, 887, 1060, 1472, 1759
HpyF10VI	GCNNNNNNNGC	3 cut(s)	147, 168, 1469
HpySE526I	ACGT	2 cut(s)	290, 1914
HspAI	GCGC	4 cut(s)	200, 1065, 1116, 1502
Ksp22I	TGATCA	2 cut(s)	600, 1794
Kzo9I	GATC	9 cut(s)	191, 264, 541, 600, 919, 989, 1747, 1794, 1970
LmnI	GCTCC	4 cut(s)	155, 335, 667, 1564
Lsp1109I	GCAGC	2 cut(s)	85, 1151
MaeI	CTAG	2 cut(s)	545, 1484
MaeII	ACGT	2 cut(s)	290, 1914
MaeIII	GTNAC	2 cut(s)	104, 1433
MalI	GATC	9 cut(s)	193, 266, 543, 602, 921, 991, 1749, 1796, 1972
MboI	GATC	9 cut(s)	191, 264, 541, 600, 919, 989, 1747, 1794, 1970
MboII	GAAGA	5 cut(s)	210, 871, 982, 995, 1433
MflI	RGATCY	4 cut(s)	191, 989, 1747, 1970
MhlI	GDGCHC	1 cut(s)	838
MlyI	GAGTC	3 cut(s)	457, 489, 1016
MmeI	TCCRAC	2 cut(s)	267, 1519
MroXI	GAANNNNTTC	1 cut(s)	914
MseI	TTAA	8 cut(s)	324, 552, 1098, 1125, 1146, 1179, 1236, 1707
MslI	CAYNNNNRTG	1 cut(s)	1419
MspA1I	CMGCKG	1 cut(s)	256
MspI	CCGG	3 cut(s)	773, 1505, 1841
MspR9I	CCNGG	3 cut(s)	582, 1841, 1842
Mva1269I	GAATGC	1 cut(s)	460
MvaI	CCWGG	1 cut(s)	582
MvnI	CGCG	2 cut(s)	1065, 1116
MwoI	GCNNNNNNNGC	3 cut(s)	147, 168, 1469
NciI	CCSGG	2 cut(s)	1841, 1842
NcoI	CCATGG	1 cut(s)	379
NdeII	GATC	9 cut(s)	191, 264, 541, 600, 919, 989, 1747, 1794, 1970
NlaIV	GGNNCC	3 cut(s)	1282, 1560, 1749
NmuCI	GTSAC	1 cut(s)	104
NspI	RCATGY	1 cut(s)	435
NspV	TTCGAA	1 cut(s)	294
PaqCI	CACCTGC	2 cut(s)	155, 796
PceI	AGGCCT	2 cut(s)	92, 423
PciI	ACATGT	1 cut(s)	431
PcsI	WCGNNNNNNNCGW	2 cut(s)	582, 1614
PctI	GAATGC	1 cut(s)	460
PdmI	GAANNNNTTC	1 cut(s)	914
PfeI	GAWTC	1 cut(s)	674
PkrI	GCNGC	2 cut(s)	75, 1141
PleI	GAGTC	3 cut(s)	456, 489, 1015
PpsI	GAGTC	3 cut(s)	456, 489, 1015
PscI	ACATGT	1 cut(s)	431
PshAI	GACNNNNGTC	1 cut(s)	1722
PshBI	ATTAAT	3 cut(s)	324, 1125, 1179
Psp1406I	AACGTT	1 cut(s)	290
Psp6I	CCWGG	1 cut(s)	580
PspGI	CCWGG	1 cut(s)	580
PspN4I	GGNNCC	3 cut(s)	1282, 1560, 1749
PspPI	GGNCC	3 cut(s)	617, 1280, 1461
PstNI	CAGNNNCTG	1 cut(s)	1867
PsuI	RGATCY	4 cut(s)	191, 989, 1747, 1970
PvuII	CAGCTG	1 cut(s)	256
RsaI	GTAC	5 cut(s)	347, 904, 1568, 1860, 1954
RsaNI	GTAC	5 cut(s)	346, 903, 1567, 1859, 1953
RseI	CAYNNNNRTG	1 cut(s)	1419
SaqAI	TTAA	8 cut(s)	324, 552, 1098, 1125, 1146, 1179, 1236, 1707
SatI	GCNGC	2 cut(s)	74, 1140
Sau3AI	GATC	9 cut(s)	191, 264, 541, 600, 919, 989, 1747, 1794, 1970
Sau96I	GGNCC	3 cut(s)	617, 1280, 1461
ScaI	AGTACT	3 cut(s)	347, 904, 1568
SchI	GAGTC	3 cut(s)	457, 489, 1016
ScrFI	CCNGG	3 cut(s)	582, 1841, 1842
SduI	GDGCHC	1 cut(s)	838
SfuI	TTCGAA	1 cut(s)	294
SinI	GGWCC	2 cut(s)	617, 1280
SmaI	CCCGGG	1 cut(s)	1842
SmiMI	CAYNNNNRTG	1 cut(s)	1419
SmlI	CTYRAG	2 cut(s)	953, 1285
SmoI	CTYRAG	2 cut(s)	953, 1285
SrfI	GCCCGGGC	1 cut(s)	1842
SseBI	AGGCCT	2 cut(s)	92, 423
SsiI	CCGC	2 cut(s)	260, 895
SspI	AATATT	1 cut(s)	1675
SspMI	CTAG	2 cut(s)	545, 1484
StuI	AGGCCT	2 cut(s)	92, 423
StyD4I	CCNGG	3 cut(s)	580, 1839, 1840
StyI	CCWWGG	1 cut(s)	379
TaaI	ACNGT	4 cut(s)	214, 1307, 1451, 1863
TaiI	ACGT	2 cut(s)	293, 1917
TaqI	TCGA	5 cut(s)	294, 428, 463, 648, 918
TaqII	GACCGA	1 cut(s)	1469
TatI	WGTACW	4 cut(s)	345, 902, 1566, 1858
TfiI	GAWTC	1 cut(s)	674
Tru1I	TTAA	8 cut(s)	324, 552, 1098, 1125, 1146, 1179, 1236, 1707
Tru9I	TTAA	8 cut(s)	324, 552, 1098, 1125, 1146, 1179, 1236, 1707
TscAI	CASTG	5 cut(s)	1090, 1456, 1645, 1837, 1896
TseFI	GTSAC	1 cut(s)	104
TseI	GCWGC	2 cut(s)	73, 1139
Tsp45I	GTSAC	1 cut(s)	104
TspDTI	ATGAA	5 cut(s)	17, 585, 1169, 1543, 1732
TspGWI	ACGGA	1 cut(s)	1734
TspMI	CCCGGG	1 cut(s)	1840
TspRI	CASTG	5 cut(s)	1090, 1456, 1645, 1837, 1896
VpaK11BI	GGWCC	2 cut(s)	617, 1280
VspI	ATTAAT	3 cut(s)	324, 1125, 1179
XapI	RAATTY	1 cut(s)	1046
XceI	RCATGY	1 cut(s)	435
XmaI	CCCGGG	1 cut(s)	1840
XmiI	GTMKAC	2 cut(s)	482, 1605
XmnI	GAANNNNTTC	1 cut(s)	914
XspI	CTAG	2 cut(s)	545, 1484
ZrmI	AGTACT	3 cut(s)	347, 904, 1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.