lysM domain receptor-like kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23770 |
| fragaria_vesca | FvH4_1g14190 |
| malus_domestica | MD02G1156000.v1.1 |
| prunus_persica | Prupe.7G147600_v2.0.a1 |
| pyrus_communis | pycom02g12330 |
| rosa_chinensis | RchiOBHm_Chr2g0102861 |
| rosa_laevigata | RLG00000017185 |
| rosa_multiflora | Rmu_sc0000388.1_g000048 Rmu_sc0000388.1_g000056 Rmu_sc0000388.1_g000057 Rmu_sc0006537.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00140240 |
| rosa_rugosa | Rorug02G0110200 |
| rosa_samantha | Rh2AG158600 Rh2BG165000 Rh2CG164700 Rh2DG163800 |
| rosa_wichuraiana | Rw2G012340 Rw2G012390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1512 |
| AccBSI | CCGCTC | 1 cut(s) | 1409 |
| AccI | GTMKAC | 2 cut(s) | 482, 1614 |
| AccII | CGCG | 1 cut(s) | 1125 |
| AciI | CCGC | 8 cut(s) | 285, 755, 889, 1125, 1407, 1664, 1744, 1946 |
| AclWI | GGATC | 5 cut(s) | 58, 1120, 1751, 1764, 1849 |
| AcsI | RAATTY | 3 cut(s) | 475, 1055, 1483 |
| AcuI | CTGAAG | 2 cut(s) | 172, 1072 |
| AfaI | GTAC | 6 cut(s) | 347, 490, 1277, 1562, 1577, 1963 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 86 |
| AflIII | ACRYGT | 1 cut(s) | 120 |
| AgsI | TTSAA | 7 cut(s) | 160, 419, 597, 641, 1316, 1676, 1828 |
| AjnI | CCWGG | 1 cut(s) | 1837 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1076, 1108 |
| Alw21I | GWGCWC | 1 cut(s) | 1689 |
| Alw26I | GTCTC | 2 cut(s) | 1011, 1232 |
| Alw44I | GTGCAC | 1 cut(s) | 1685 |
| AlwI | GGATC | 5 cut(s) | 58, 1120, 1751, 1764, 1849 |
| AoxI | GGCC | 3 cut(s) | 421, 1374, 1470 |
| ApaLI | GTGCAC | 1 cut(s) | 1685 |
| ApeKI | GCWGC | 6 cut(s) | 76, 147, 448, 782, 1148, 1870 |
| ApoI | RAATTY | 3 cut(s) | 475, 1055, 1483 |
| AspLEI | GCGC | 2 cut(s) | 946, 1513 |
| AspS9I | GGNCC | 2 cut(s) | 1289, 1470 |
| AsuC2I | CCSGG | 1 cut(s) | 1234 |
| AvaII | GGWCC | 1 cut(s) | 1289 |
| AxyI | CCTNAGG | 2 cut(s) | 1378, 1927 |
| BaeGI | GKGCMC | 2 cut(s) | 1630, 1689 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 906, 939 |
| BamHI | GGATCC | 1 cut(s) | 1756 |
| BbsI | GAAGAC | 2 cut(s) | 914, 1323 |
| Bbv12I | GWGCWC | 1 cut(s) | 1689 |
| BbvI | GCAGC | 6 cut(s) | 88, 134, 460, 769, 1135, 1882 |
| BciT130I | CCWGG | 1 cut(s) | 1839 |
| BciVI | GTATCC | 1 cut(s) | 134 |
| BclI | TGATCA | 2 cut(s) | 1104, 1803 |
| BcnI | CCSGG | 1 cut(s) | 1234 |
| BcoDI | GTCTC | 2 cut(s) | 1011, 1232 |
| BfaI | CTAG | 5 cut(s) | 492, 720, 1001, 1014, 1493 |
| BfmI | CTRYAG | 1 cut(s) | 959 |
| BfoI | RGCGCY | 1 cut(s) | 947 |
| BfuI | GTATCC | 1 cut(s) | 134 |
| BisI | GCNGC | 8 cut(s) | 77, 148, 449, 783, 1126, 1149, 1745, 1871 |
| BlpI | GCTNAGC | 1 cut(s) | 72 |
| BlsI | GCNGC | 8 cut(s) | 78, 149, 450, 784, 1127, 1150, 1746, 1872 |
| BmcAI | AGTACT | 2 cut(s) | 347, 1577 |
| Bme1390I | CCNGG | 2 cut(s) | 1234, 1839 |
| Bme18I | GGWCC | 1 cut(s) | 1289 |
| BmgT120I | GGNCC | 2 cut(s) | 1289, 1470 |
| BmiI | GGNNCC | 3 cut(s) | 1291, 1569, 1758 |
| BmrFI | CCNGG | 2 cut(s) | 1234, 1839 |
| BmsI | GCATC | 2 cut(s) | 435, 607 |
| BpiI | GAAGAC | 2 cut(s) | 914, 1323 |
| BpmI | CTGGAG | 2 cut(s) | 762, 1078 |
| Bpu10I | CCTNAGC | 1 cut(s) | 337 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 72 |
| BpuEI | CTTGAG | 4 cut(s) | 968, 1315, 1767, 1864 |
| BpuMI | CCSGG | 1 cut(s) | 1234 |
| BsaAI | YACGTR | 1 cut(s) | 1564 |
| BsaJI | CCNNGG | 3 cut(s) | 1233, 1837, 1936 |
| BsaWI | WCCGGW | 1 cut(s) | 1649 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 831, 861, 1076, 1106, 1396, 1426 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 86 |
| Bse1I | ACTGG | 5 cut(s) | 304, 320, 490, 586, 1095 |
| Bse21I | CCTNAGG | 2 cut(s) | 1378, 1927 |
| Bse3DI | GCAATG | 1 cut(s) | 157 |
| BseBI | CCWGG | 1 cut(s) | 1839 |
| BseDI | CCNNGG | 3 cut(s) | 1233, 1837, 1936 |
| BseGI | GGATG | 3 cut(s) | 979, 1147, 1375 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 86 |
| BseMI | GCAATG | 1 cut(s) | 157 |
| BseMII | CTCAG | 9 cut(s) | 86, 266, 270, 351, 511, 1004, 1392, 1563, 1941 |
| BseNI | ACTGG | 5 cut(s) | 304, 320, 490, 586, 1095 |
| BseRI | GAGGAG | 3 cut(s) | 852, 1401, 1404 |
| BseSI | GKGCMC | 2 cut(s) | 1630, 1689 |
| BseXI | GCAGC | 6 cut(s) | 88, 134, 460, 769, 1135, 1882 |
| BseYI | CCCAGC | 1 cut(s) | 824 |
| BsgI | GTGCAG | 3 cut(s) | 1376, 1379, 1889 |
| Bsh1236I | CGCG | 1 cut(s) | 1125 |
| BshFI | GGCC | 3 cut(s) | 423, 1376, 1472 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1689 |
| BsiSI | CCGG | 3 cut(s) | 767, 1233, 1650 |
| BslFI | GGGAC | 1 cut(s) | 507 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 86 |
| BsmAI | GTCTC | 2 cut(s) | 1011, 1232 |
| BsmBI | CGTCTC | 1 cut(s) | 1232 |
| BsmFI | GGGAC | 1 cut(s) | 507 |
| BsnI | GGCC | 3 cut(s) | 423, 1376, 1472 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1630, 1689 |
| Bsp143I | GATC | 8 cut(s) | 63, 191, 1104, 1112, 1593, 1756, 1803, 1841 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 72 |
| BspACI | CCGC | 8 cut(s) | 285, 755, 889, 1125, 1407, 1664, 1744, 1946 |
| BspANI | GGCC | 3 cut(s) | 423, 1376, 1472 |
| BspCNI | CTCAG | 9 cut(s) | 85, 265, 271, 350, 510, 1003, 1391, 1564, 1940 |
| BspFNI | CGCG | 1 cut(s) | 1125 |
| BspHI | TCATGA | 1 cut(s) | 561 |
| BspLI | GGNNCC | 3 cut(s) | 1291, 1569, 1758 |
| BspPI | GGATC | 5 cut(s) | 58, 1120, 1751, 1764, 1849 |
| BsrBI | CCGCTC | 1 cut(s) | 1409 |
| BsrDI | GCAATG | 1 cut(s) | 157 |
| BsrI | ACTGG | 5 cut(s) | 304, 320, 490, 586, 1095 |
| BssECI | CCNNGG | 3 cut(s) | 1233, 1837, 1936 |
| BssMI | GATC | 8 cut(s) | 63, 191, 1104, 1112, 1593, 1756, 1803, 1841 |
| BssNAI | GTATAC | 1 cut(s) | 483 |
| BssT1I | CCWWGG | 1 cut(s) | 1936 |
| Bst1107I | GTATAC | 1 cut(s) | 483 |
| Bst2UI | CCWGG | 1 cut(s) | 1839 |
| Bst4CI | ACNGT | 5 cut(s) | 214, 458, 919, 1460, 1520 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 293 |
| BstBAI | YACGTR | 1 cut(s) | 1564 |
| BstC8I | GCNNGC | 1 cut(s) | 258 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 84 |
| BstF5I | GGATG | 3 cut(s) | 979, 1147, 1375 |
| BstFNI | CGCG | 1 cut(s) | 1125 |
| BstH2I | RGCGCY | 1 cut(s) | 947 |
| BstHHI | GCGC | 2 cut(s) | 946, 1513 |
| BstKTI | GATC | 8 cut(s) | 66, 194, 1107, 1115, 1596, 1759, 1806, 1844 |
| BstMAI | GTCTC | 2 cut(s) | 1011, 1232 |
| BstMBI | GATC | 8 cut(s) | 63, 191, 1104, 1112, 1593, 1756, 1803, 1841 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 153, 293, 658, 1031, 1478, 1502, 1625 |
| BstNI | CCWGG | 1 cut(s) | 1839 |
| BstSCI | CCNGG | 2 cut(s) | 1232, 1837 |
| BstSFI | CTRYAG | 1 cut(s) | 959 |
| BstSLI | GKGCMC | 2 cut(s) | 1630, 1689 |
| BstUI | CGCG | 1 cut(s) | 1125 |
| BstV1I | GCAGC | 6 cut(s) | 88, 134, 460, 769, 1135, 1882 |
| BstV2I | GAAGAC | 2 cut(s) | 914, 1323 |
| BstX2I | RGATCY | 3 cut(s) | 1112, 1756, 1841 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 235 |
| BstYI | RGATCY | 3 cut(s) | 1112, 1756, 1841 |
| BstZ17I | GTATAC | 1 cut(s) | 483 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1378, 1927 |
| BsuI | GTATCC | 1 cut(s) | 134 |
| BsuRI | GGCC | 3 cut(s) | 423, 1376, 1472 |
| BtgZI | GCGATG | 1 cut(s) | 208 |
| BtsCI | GGATG | 3 cut(s) | 979, 1147, 1375 |
| BtsIMutI | CAGTG | 4 cut(s) | 210, 505, 1465, 1898 |
| Cac8I | GCNNGC | 1 cut(s) | 258 |
| CciI | TCATGA | 1 cut(s) | 561 |
| CfoI | GCGC | 2 cut(s) | 946, 1513 |
| Cfr13I | GGNCC | 2 cut(s) | 1289, 1470 |
| Csp6I | GTAC | 6 cut(s) | 346, 489, 1276, 1561, 1576, 1962 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1588, 1623 |
| CviQI | GTAC | 6 cut(s) | 346, 489, 1276, 1561, 1576, 1962 |
| DpnI | GATC | 8 cut(s) | 65, 193, 1106, 1114, 1595, 1758, 1805, 1843 |
| DpnII | GATC | 8 cut(s) | 63, 191, 1104, 1112, 1593, 1756, 1803, 1841 |
| DraI | TTTAAA | 1 cut(s) | 705 |
| Eco130I | CCWWGG | 1 cut(s) | 1936 |
| Eco147I | AGGCCT | 1 cut(s) | 423 |
| Eco47I | GGWCC | 1 cut(s) | 1289 |
| Eco57I | CTGAAG | 2 cut(s) | 172, 1072 |
| Eco81I | CCTNAGG | 2 cut(s) | 1378, 1927 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 84 |
| EcoRII | CCWGG | 1 cut(s) | 1837 |
| EcoT14I | CCWWGG | 1 cut(s) | 1936 |
| ErhI | CCWWGG | 1 cut(s) | 1936 |
| Esp3I | CGTCTC | 1 cut(s) | 1232 |
| FaqI | GGGAC | 1 cut(s) | 507 |
| FauI | CCCGC | 1 cut(s) | 1939 |
| FbaI | TGATCA | 2 cut(s) | 1104, 1803 |
| FblI | GTMKAC | 2 cut(s) | 482, 1614 |
| Fnu4HI | GCNGC | 8 cut(s) | 77, 148, 449, 783, 1126, 1149, 1745, 1871 |
| FokI | GGATG | 3 cut(s) | 986, 1154, 1382 |
| Fsp4HI | GCNGC | 8 cut(s) | 77, 148, 449, 783, 1126, 1149, 1745, 1871 |
| FspBI | CTAG | 5 cut(s) | 492, 720, 1001, 1014, 1493 |
| FspI | TGCGCA | 1 cut(s) | 1512 |
| GlaI | GCGC | 2 cut(s) | 945, 1512 |
| GluI | GCNGC | 8 cut(s) | 77, 148, 449, 783, 1126, 1149, 1745, 1871 |
| GsaI | CCCAGC | 1 cut(s) | 828 |
| GsuI | CTGGAG | 2 cut(s) | 762, 1078 |
| HaeII | RGCGCY | 1 cut(s) | 947 |
| HaeIII | GGCC | 3 cut(s) | 423, 1376, 1472 |
| HapII | CCGG | 3 cut(s) | 767, 1233, 1650 |
| HhaI | GCGC | 2 cut(s) | 946, 1513 |
| Hin6I | GCGC | 2 cut(s) | 944, 1511 |
| HinP1I | GCGC | 2 cut(s) | 944, 1511 |
| HindIII | AAGCTT | 2 cut(s) | 934, 1604 |
| HinfI | GANTC | 9 cut(s) | 281, 495, 549, 634, 980, 986, 1004, 1222, 1537 |
| HpaII | CCGG | 3 cut(s) | 767, 1233, 1650 |
| Hpy166II | GTNNAC | 6 cut(s) | 483, 725, 1051, 1423, 1615, 1687 |
| Hpy8I | GTNNAC | 6 cut(s) | 483, 725, 1051, 1423, 1615, 1687 |
| HpyAV | CCTTC | 7 cut(s) | 20, 80, 106, 196, 624, 691, 753 |
| HpyCH4III | ACNGT | 5 cut(s) | 214, 458, 919, 1460, 1520 |
| HpyCH4IV | ACGT | 3 cut(s) | 120, 180, 1563 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 153, 293, 658, 1031, 1478, 1502, 1625 |
| HpySE526I | ACGT | 3 cut(s) | 120, 180, 1563 |
| HspAI | GCGC | 2 cut(s) | 944, 1511 |
| Ksp22I | TGATCA | 2 cut(s) | 1104, 1803 |
| Kzo9I | GATC | 8 cut(s) | 63, 191, 1104, 1112, 1593, 1756, 1803, 1841 |
| LmnI | GCTCC | 3 cut(s) | 1097, 1414, 1573 |
| Lsp1109I | GCAGC | 6 cut(s) | 88, 134, 460, 769, 1135, 1882 |
| LweI | GCATC | 2 cut(s) | 435, 607 |
| MaeI | CTAG | 5 cut(s) | 492, 720, 1001, 1014, 1493 |
| MaeII | ACGT | 3 cut(s) | 120, 180, 1563 |
| MaeIII | GTNAC | 7 cut(s) | 107, 181, 322, 566, 574, 1442, 1520 |
| MalI | GATC | 8 cut(s) | 65, 193, 1106, 1114, 1595, 1758, 1805, 1843 |
| MbiI | CCGCTC | 1 cut(s) | 1409 |
| MboI | GATC | 8 cut(s) | 63, 191, 1104, 1112, 1593, 1756, 1803, 1841 |
| MflI | RGATCY | 3 cut(s) | 1112, 1756, 1841 |
| MhlI | GDGCHC | 2 cut(s) | 1630, 1689 |
| MlyI | GAGTC | 4 cut(s) | 290, 489, 628, 1013 |
| MmeI | TCCRAC | 4 cut(s) | 1322, 1347, 1528, 1617 |
| MseI | TTAA | 4 cut(s) | 704, 1245, 1386, 1716 |
| MspA1I | CMGCKG | 4 cut(s) | 147, 782, 1505, 1946 |
| MspI | CCGG | 3 cut(s) | 767, 1233, 1650 |
| MspR9I | CCNGG | 2 cut(s) | 1234, 1839 |
| MvaI | CCWGG | 1 cut(s) | 1839 |
| MvnI | CGCG | 1 cut(s) | 1125 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 153, 293, 658, 1031, 1478, 1502, 1625 |
| NciI | CCSGG | 1 cut(s) | 1234 |
| NdeII | GATC | 8 cut(s) | 63, 191, 1104, 1112, 1593, 1756, 1803, 1841 |
| NlaIV | GGNNCC | 3 cut(s) | 1291, 1569, 1758 |
| NmuCI | GTSAC | 3 cut(s) | 181, 322, 1520 |
| NsbI | TGCGCA | 1 cut(s) | 1512 |
| PagI | TCATGA | 1 cut(s) | 561 |
| PceI | AGGCCT | 1 cut(s) | 423 |
| PfeI | GAWTC | 5 cut(s) | 549, 980, 986, 1222, 1537 |
| PkrI | GCNGC | 8 cut(s) | 78, 149, 450, 784, 1127, 1150, 1746, 1872 |
| PleI | GAGTC | 4 cut(s) | 289, 489, 628, 1012 |
| PpsI | GAGTC | 4 cut(s) | 289, 489, 628, 1012 |
| Ppu21I | YACGTR | 1 cut(s) | 1564 |
| Psp6I | CCWGG | 1 cut(s) | 1837 |
| PspFI | CCCAGC | 1 cut(s) | 824 |
| PspGI | CCWGG | 1 cut(s) | 1837 |
| PspN4I | GGNNCC | 3 cut(s) | 1291, 1569, 1758 |
| PspPI | GGNCC | 2 cut(s) | 1289, 1470 |
| PsuI | RGATCY | 3 cut(s) | 1112, 1756, 1841 |
| PvuII | CAGCTG | 3 cut(s) | 147, 782, 1505 |
| RsaI | GTAC | 6 cut(s) | 347, 490, 1277, 1562, 1577, 1963 |
| RsaNI | GTAC | 6 cut(s) | 346, 489, 1276, 1561, 1576, 1962 |
| SaqAI | TTAA | 4 cut(s) | 704, 1245, 1386, 1716 |
| SatI | GCNGC | 8 cut(s) | 77, 148, 449, 783, 1126, 1149, 1745, 1871 |
| Sau3AI | GATC | 8 cut(s) | 63, 191, 1104, 1112, 1593, 1756, 1803, 1841 |
| Sau96I | GGNCC | 2 cut(s) | 1289, 1470 |
| ScaI | AGTACT | 2 cut(s) | 347, 1577 |
| SchI | GAGTC | 4 cut(s) | 290, 489, 628, 1013 |
| ScrFI | CCNGG | 2 cut(s) | 1234, 1839 |
| SduI | GDGCHC | 2 cut(s) | 1630, 1689 |
| SfaNI | GCATC | 2 cut(s) | 435, 607 |
| SfcI | CTRYAG | 1 cut(s) | 959 |
| SinI | GGWCC | 1 cut(s) | 1289 |
| SmlI | CTYRAG | 4 cut(s) | 947, 1294, 1782, 1879 |
| SmoI | CTYRAG | 4 cut(s) | 947, 1294, 1782, 1879 |
| SseBI | AGGCCT | 1 cut(s) | 423 |
| SsiI | CCGC | 8 cut(s) | 285, 755, 889, 1125, 1407, 1664, 1744, 1946 |
| SspMI | CTAG | 5 cut(s) | 492, 720, 1001, 1014, 1493 |
| StuI | AGGCCT | 1 cut(s) | 423 |
| StyD4I | CCNGG | 2 cut(s) | 1232, 1837 |
| StyI | CCWWGG | 1 cut(s) | 1936 |
| TaaI | ACNGT | 5 cut(s) | 214, 458, 919, 1460, 1520 |
| TaiI | ACGT | 3 cut(s) | 123, 183, 1566 |
| TaqI | TCGA | 2 cut(s) | 125, 788 |
| TatI | WGTACW | 2 cut(s) | 345, 1575 |
| TauI | GCSGC | 2 cut(s) | 1128, 1747 |
| TfiI | GAWTC | 5 cut(s) | 549, 980, 986, 1222, 1537 |
| Tru1I | TTAA | 4 cut(s) | 704, 1245, 1386, 1716 |
| Tru9I | TTAA | 4 cut(s) | 704, 1245, 1386, 1716 |
| TscAI | CASTG | 4 cut(s) | 217, 505, 1465, 1905 |
| TseFI | GTSAC | 3 cut(s) | 181, 322, 1520 |
| TseI | GCWGC | 6 cut(s) | 76, 147, 448, 782, 1148, 1870 |
| Tsp45I | GTSAC | 3 cut(s) | 181, 322, 1520 |
| TspDTI | ATGAA | 9 cut(s) | 12, 99, 368, 735, 990, 1178, 1737, 1741, 1871 |
| TspRI | CASTG | 4 cut(s) | 217, 505, 1465, 1905 |
| VneI | GTGCAC | 1 cut(s) | 1685 |
| VpaK11BI | GGWCC | 1 cut(s) | 1289 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 84 |
| XapI | RAATTY | 3 cut(s) | 475, 1055, 1483 |
| XbaI | TCTAGA | 2 cut(s) | 1000, 1013 |
| XmiI | GTMKAC | 2 cut(s) | 482, 1614 |
| XspI | CTAG | 5 cut(s) | 492, 720, 1001, 1014, 1493 |
| ZrmI | AGTACT | 2 cut(s) | 347, 1577 |