Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0008879

Physical Location & Seq

Genomic Coordinates Forward (+)

34865359 .. 34868949

Gene Structure 3591 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1293000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGGAGGAGGAGAAGAGGGGTTTTGCAGAAGTCGTGATGGAATTAAAAGCTTTGGTGATTGAGGTGAGTTCTTTGGCTCAAAACTCAGAAATTCAAAGAGAAGTAGTGACTGAATTTGTAATCTTGGTTGGGAAATTAGCTCCAATTCTTGATGGATTAATGGAGAATACTAAGTTTCTTGATCACCAACCATTGAGAAAACCTGTTGAGTCTCTTGGGTTGGAACTTAAGAGAGCCAAGGCTTTGCTGAAAACCCAAGAGACAAAATCATTTGTTAGACAAATAGAGGATGTGGTTCATGATCTTGGGAGGTCATTAGGGTTAGTGCTCTTGGCAAGTTTAGAAGTGTCCACAGATTTGAAAGACAAGGTTGGGGGCTTACACAAGGATTTGATGAGTACGCGGTTTGATGTGAGTTCGTTTGCGAGTACTAGTTATGGTTCTGGTGTTGTTAGTGAGTTGGAAGTGGAAGTGGAAGAGGAAATACAAGAGGAGAAAACGGTTTGTTTTGGTATCGATGATGTTTCTTCGCAAATTAAGTATGGTGATGATGAACAACTTAAATTTGCTCTTTTGGAATTAAATGAGTTGATTGGAAACAAAAGGGTTGGATATGAATGGATTAATGATGAAGGTATTATTCCGATTCTGTTTAATCGGTTGAGTTCAAGTAATTCGGAGAATCGGCTTTGTATACTTCGATTGTTGAGAAGCCTTGCTTCAGATAATGCTGATAACAAGGAGAAAATGGCAGATGTTGGTTATTTGTCTGCGGCTGTGAAATCATTGGTACGGGATGAAGAAGAAAGGAAAGAAGCTGTGGGGTTTTTGCTGTATCTCTCAGATCTTCAGTCAGTAAGGCGCCGACTTGGGCGGATTCAAGGGTGTATAGTTATGTTGGTTGCCTTGCTAAATGAGGATGACCTTGTCGCTTCACGTAATGCAGGGAAGTTGTTGAATGCATTATCTAGCAACACGCAGAATGCGCTTCATATGGCAGAGGCTGGTTACTTTAAGCCCCTAGTGCAGTACCTCGAAGAAGGTTCGGACATGAGTAAAATCCTGATGGCAACAGCACTCTCAAGGATAGAGCTCACTGATCAAAGTCGAGCTTCCCTCGGGGAAAATGGTGCAATTGAACCCCTTGTCAGAATGTTTAGAGTAGGGAAGCTTGAAGCCAAGTTATCTGCTTTAAGTGCCTTGCAAAATCTATCAAACCTGACAGAAAATGTCCAACGGTTGATCAGTTCAGGCATTGTAGCATCTCTGCTTCAGCTCCTCTTCTCTGTAACATCAGTACTTATGGCTCTTCGGGAGCCTGTATCAGCAATTCTTGCAAGGATTGCTCAATCGGAATCTATTCTTGTGAATTCAGATGTTGCTCAGCAGATGCTCTCCCTTTTAAATCTCACCAGTCCGGTAATTCAAAATCACCTATTGCAAGCACTTAATAGTATTGCCTCCCATTCCAGAGCAGGCAAAGTTAGAAGAAGGATGAAAGAAAATGGCGCCTTTCAGCTTCTCCTACCCTTCCTCTTGGAAACTAACATTAAAATCAGGAGCAGTGCCTTGAGTTTGCTTTACACTCTTTCTAAAGATTTATTGGAAGAGTTGACAGACCAACTTGGAGAAACCAATATCAGAACAATCATCATTATCATCTCAACATCAACATCTGACTGCGAAAAAGCCGCTGGAGTTGGCATACTTAGCCATCTTCCCATAAGTGACAAAAAGGTGACGGATATATTAAAGAGAGCAAATTTGGTACCGATAATGGTATCCATAATGAATTCAAGATCTGAAATTCCAGCAGAGAAGATGTGCTGTTTAGCAGAAAGCATTACAGGTCTATTAATTCGGTTCACAAATCCTGCTGATAAGAAACTACAACTTTATTCAGCAGAACAAGGGGTAATTCCTTTACTTGTCAAGTTACTCTCGAGTGGATCACCTGTTGCTAAATGCAGGGCTGCAACGTCACTAGCTCAGTTTTCGCAGAATTCATCATCTCTAAAGAAGTCGATAAAACCAAGGTGGTCATGCGTTCCTCCTTCTCAAGATGCTGTTTGTGAAGTTCATGATGGAAAATGCTTTGTGAAAAGCACATTTTGTATGGTCAAGGCAGGTGCTATCTCTCCTATAATCCAAATATTGGAAGGTAAGGAGAGGGAAGCGGATGAAGCAGCACTGAGTGTCCTTGCAACCCTCTTGCACGATGACATTTGGGAAAACGGAAGCAAGTACATAGCCAAAAAGTCAGGAATTCCGGCCATCATCAAAGTCCTCGAATCCGGGAGCATCAAGGCTCAAGAGAAAGCACTATGGATATTGGAGAAGATATTTGGAGTTGAGGAACACCGAGTAACATACGGGGAATCTGCTCAAGCAGTGCTGATTGATCTAGCCCAGCAGGGTGACTCCAGATTGAAATCAACCACTGCAAAATTACTGGCGCAACTAGAGCTATTGCAAGTTCAATCTAGTTACTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm KAP

Protein Analysis

832

Amino Acids

91.26

Weight (kDa)

5.76

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	207 - 420	1.3e-09	ARMC5
ARM_ARMC5	PF24768	397 - 673	6.9e-06	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008879)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g02490 FvH4_7g02490 FvH4_7g02490
malus_domestica	MD02G1293000.v1.1 MD07G1034100.v1.1
prunus_persica	Prupe.2G030600_v2.0.a1 Prupe.2G030600_v2.0.a1
pyrus_communis	pycom02g24740 pycom07g02410
rosa_chinensis	RchiOBHm_Chr1g0321131
rosa_laevigata	RLG00000030449
rosa_multiflora	Rmu_sc0004660.1_g000007 Rmu_sc0007977.1_g000007
rosa_roxburghii	Rroxscaffold_160G00433740 Rroxscaffold_4G00328070
rosa_rugosa	Rorug01G0031200 Rorug01G0031300
rosa_samantha	Rh1AG043200 Rh1BG039900 Rh1CG045300 Rh1DG049900
rosa_wichuraiana	Rw0G001070 Rw1G003790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2117
Acc36I	ACCTGC	1 cut(s)	2117
Acc65I	GGTACC	1 cut(s)	1768
AccB1I	GGYRCC	3 cut(s)	861, 1508, 1768
AccB7I	CCANNNNNTGG	1 cut(s)	2155
AccI	GTMKAC	1 cut(s)	694
AccII	CGCG	1 cut(s)	403
AciI	CCGC	5 cut(s)	403, 773, 874, 1692, 2177
AclWI	GGATC	1 cut(s)	1957
AcoI	YGGCCR	1 cut(s)	2271
AcsI	RAATTY	9 cut(s)	90, 113, 563, 1369, 1762, 1792, 1806, 2002, 2265
AcuI	CTGAAG	3 cut(s)	705, 833, 1256
AcyI	GRCGYC	2 cut(s)	862, 1509
AdeI	CACNNNGTG	1 cut(s)	2195
AfaI	GTAC	7 cut(s)	400, 430, 792, 1031, 1299, 1770, 2246
AfiI	CCNNNNNNNGG	1 cut(s)	2155
AflII	CTTAAG	1 cut(s)	227
AhlI	ACTAGT	1 cut(s)	431
Alw21I	GWGCWC	2 cut(s)	330, 1095
Alw26I	GTCTC	2 cut(s)	216, 254
AlwI	GGATC	1 cut(s)	1957
AlwNI	CAGNNNCTG	1 cut(s)	1004
Ama87I	CYCGRG	2 cut(s)	1118, 1942
AoxI	GGCC	1 cut(s)	2271
ApeKI	GCWGC	2 cut(s)	1973, 2186
ApoI	RAATTY	9 cut(s)	90, 113, 563, 1369, 1762, 1792, 1806, 2002, 2265
AseI	ATTAAT	3 cut(s)	158, 624, 1856
Asp700I	GAANNNNTTC	1 cut(s)	1359
Asp718I	GGTACC	1 cut(s)	1768
AspLEI	GCGC	4 cut(s)	864, 988, 1511, 2458
AsuC2I	CCSGG	1 cut(s)	2296
AsuHPI	GGTGA	9 cut(s)	67, 76, 176, 557, 1402, 1424, 1750, 1944, 2429
AvaI	CYCGRG	2 cut(s)	1118, 1942
BanI	GGYRCC	3 cut(s)	861, 1508, 1768
BanII	GRGCYC	1 cut(s)	1095
BarI	GAAGNNNNNNTAC	2 cut(s)	468, 500
Bbv12I	GWGCWC	2 cut(s)	330, 1095
BbvI	GCAGC	2 cut(s)	1960, 2198
BccI	CCATC	6 cut(s)	31, 146, 1060, 1722, 2078, 2282
BciVI	GTATCC	1 cut(s)	1792
BclI	TGATCA	3 cut(s)	181, 1099, 1242
BcnI	CCSGG	1 cut(s)	2296
BcoDI	GTCTC	2 cut(s)	216, 254
BcuI	ACTAGT	1 cut(s)	431
BfaI	CTAG	7 cut(s)	432, 969, 1022, 1985, 2405, 2462, 2484
BfoI	RGCGCY	2 cut(s)	865, 1512
BfrI	CTTAAG	1 cut(s)	227
BfuAI	ACCTGC	1 cut(s)	2117
BfuI	GTATCC	1 cut(s)	1792
BglII	AGATCT	2 cut(s)	844, 1799
BisI	GCNGC	4 cut(s)	774, 1692, 1974, 2187
BlpI	GCTNAGC	1 cut(s)	1383
BlsI	GCNGC	4 cut(s)	775, 1693, 1975, 2188
BmcAI	AGTACT	2 cut(s)	430, 1299
Bme1390I	CCNGG	1 cut(s)	2296
BmeT110I	CYCGRG	2 cut(s)	1118, 1942
BmiI	GGNNCC	4 cut(s)	863, 1317, 1510, 1770
BmrFI	CCNGG	1 cut(s)	2296
BmsI	GCATC	4 cut(s)	1271, 1380, 2053, 2310
BplI	GAGNNNNNCTC	2 cut(s)	1101, 1133
BpmI	CTGGAG	2 cut(s)	1716, 2407
Bpu1102I	GCTNAGC	1 cut(s)	1383
BpuEI	CTTGAG	5 cut(s)	1066, 1591, 2043, 2295, 2370
BpuMI	CCSGG	1 cut(s)	2296
Bsa29I	ATCGAT	1 cut(s)	516
BsaAI	YACGTR	1 cut(s)	938
BsaBI	GATNNNNATC	1 cut(s)	2431
BsaHI	GRCGYC	2 cut(s)	862, 1509
BsaJI	CCNNGG	3 cut(s)	237, 1117, 2033
BsaWI	WCCGGW	1 cut(s)	1417
Bsc4I	CCNNNNNNNGG	1 cut(s)	2155
Bse1I	ACTGG	2 cut(s)	1413, 2457
Bse8I	GATNNNNATC	1 cut(s)	2431
BseCI	ATCGAT	1 cut(s)	516
BseDI	CCNNGG	3 cut(s)	237, 1117, 2033
BseGI	GGATG	5 cut(s)	295, 802, 925, 1500, 2185
BseJI	GATNNNNATC	1 cut(s)	2431
BseLI	CCNNNNNNNGG	1 cut(s)	2155
BseMII	CTCAG	5 cut(s)	99, 855, 1397, 2003, 2183
BseNI	ACTGG	2 cut(s)	1413, 2457
BseRI	GAGGAG	4 cut(s)	20, 23, 506, 1268
BseXI	GCAGC	2 cut(s)	1960, 2198
BseYI	CCCAGC	1 cut(s)	2409
BsgI	GTGCAG	1 cut(s)	1046
Bsh1236I	CGCG	1 cut(s)	403
BshFI	GGCC	1 cut(s)	2273
BshNI	GGYRCC	3 cut(s)	861, 1508, 1768
BshVI	ATCGAT	1 cut(s)	516
BsiHKAI	GWGCWC	2 cut(s)	330, 1095
BsiHKCI	CYCGRG	2 cut(s)	1118, 1942
BsiSI	CCGG	3 cut(s)	1418, 2270, 2295
BslI	CCNNNNNNNGG	1 cut(s)	2155
BsmAI	GTCTC	2 cut(s)	216, 254
BsmI	GAATGC	2 cut(s)	964, 988
BsnI	GGCC	1 cut(s)	2273
BsoBI	CYCGRG	2 cut(s)	1118, 1942
Bsp1286I	GDGCHC	2 cut(s)	330, 1095
Bsp143I	GATC	8 cut(s)	181, 301, 844, 1099, 1242, 1799, 1949, 2401
Bsp1720I	GCTNAGC	1 cut(s)	1383
BspACI	CCGC	5 cut(s)	403, 773, 874, 1692, 2177
BspANI	GGCC	1 cut(s)	2273
BspCNI	CTCAG	5 cut(s)	98, 854, 1396, 2002, 2184
BspDI	ATCGAT	1 cut(s)	516
BspFNI	CGCG	1 cut(s)	403
BspHI	TCATGA	2 cut(s)	298, 2080
BspLI	GGNNCC	4 cut(s)	863, 1317, 1510, 1770
BspMI	ACCTGC	1 cut(s)	2117
BspPI	GGATC	1 cut(s)	1957
BspQI	GCTCTTC	1 cut(s)	1314
BspT107I	GGYRCC	3 cut(s)	861, 1508, 1768
BspTI	CTTAAG	1 cut(s)	227
BsrI	ACTGG	2 cut(s)	1413, 2457
BssECI	CCNNGG	3 cut(s)	237, 1117, 2033
BssMI	GATC	8 cut(s)	181, 301, 844, 1099, 1242, 1799, 1949, 2401
BssNAI	GTATAC	1 cut(s)	695
BssNI	GRCGYC	2 cut(s)	862, 1509
BssT1I	CCWWGG	2 cut(s)	237, 2033
Bst1107I	GTATAC	1 cut(s)	695
Bst4CI	ACNGT	2 cut(s)	502, 1239
Bst6I	CTCTTC	5 cut(s)	8, 471, 1286, 1314, 1602
BstACI	GRCGYC	2 cut(s)	862, 1509
BstAFI	CTTAAG	1 cut(s)	227
BstAPI	GCANNNNNTGC	2 cut(s)	1334, 1343
BstBAI	YACGTR	1 cut(s)	938
BstC8I	GCNNGC	2 cut(s)	1443, 1477
BstDEI	CTNAG	7 cut(s)	85, 171, 841, 1383, 1709, 1989, 2192
BstF5I	GGATG	5 cut(s)	295, 802, 925, 1500, 2185
BstFNI	CGCG	1 cut(s)	403
BstH2I	RGCGCY	2 cut(s)	865, 1512
BstHHI	GCGC	4 cut(s)	864, 988, 1511, 2458
BstKTI	GATC	8 cut(s)	184, 304, 847, 1102, 1245, 1802, 1952, 2404
BstMAI	GTCTC	2 cut(s)	216, 254
BstMBI	GATC	8 cut(s)	181, 301, 844, 1099, 1242, 1799, 1949, 2401
BstMWI	GCNNNNNNNGC	8 cut(s)	985, 1024, 1196, 1334, 1343, 1710, 2183, 2464
BstSCI	CCNGG	1 cut(s)	2294
BstUI	CGCG	1 cut(s)	403
BstV1I	GCAGC	2 cut(s)	1960, 2198
BstX2I	RGATCY	2 cut(s)	844, 1799
BstYI	RGATCY	2 cut(s)	844, 1799
BstZ17I	GTATAC	1 cut(s)	695
Bsu15I	ATCGAT	1 cut(s)	516
BsuI	GTATCC	1 cut(s)	1792
BsuRI	GGCC	1 cut(s)	2273
BsuTUI	ATCGAT	1 cut(s)	516
BtsCI	GGATG	5 cut(s)	295, 802, 925, 1500, 2185
BtsI	GCAGTG	3 cut(s)	1570, 2397, 2439
BtsIMutI	CAGTG	5 cut(s)	1095, 1570, 2189, 2397, 2439
BveI	ACCTGC	1 cut(s)	2117
Cac8I	GCNNGC	2 cut(s)	1443, 1477
CaiI	CAGNNNCTG	1 cut(s)	1004
CciI	TCATGA	2 cut(s)	298, 2080
CfoI	GCGC	4 cut(s)	864, 988, 1511, 2458
ClaI	ATCGAT	1 cut(s)	516
Csp6I	GTAC	7 cut(s)	399, 429, 791, 1030, 1298, 1769, 2245
CviAII	CATG	4 cut(s)	299, 1051, 2043, 2081
CviQI	GTAC	7 cut(s)	399, 429, 791, 1030, 1298, 1769, 2245
DdeI	CTNAG	7 cut(s)	85, 171, 841, 1383, 1709, 1989, 2192
DinI	GGCGCC	2 cut(s)	863, 1510
DpnI	GATC	8 cut(s)	183, 303, 846, 1101, 1244, 1801, 1951, 2403
DpnII	GATC	8 cut(s)	181, 301, 844, 1099, 1242, 1799, 1949, 2401
DraI	TTTAAA	1 cut(s)	1404
DraIII	CACNNNGTG	1 cut(s)	2195
EaeI	YGGCCR	1 cut(s)	2271
Eam1104I	CTCTTC	5 cut(s)	8, 471, 1286, 1314, 1602
EarI	CTCTTC	5 cut(s)	8, 471, 1286, 1314, 1602
EciI	GGCGGA	1 cut(s)	889
Ecl136II	GAGCTC	1 cut(s)	1093
Eco130I	CCWWGG	2 cut(s)	237, 2033
Eco24I	GRGCYC	1 cut(s)	1095
Eco53kI	GAGCTC	1 cut(s)	1093
Eco57I	CTGAAG	3 cut(s)	705, 833, 1256
Eco88I	CYCGRG	2 cut(s)	1118, 1942
EcoICRI	GAGCTC	1 cut(s)	1093
EcoRI	GAATTC	4 cut(s)	1369, 1792, 2002, 2265
EcoT14I	CCWWGG	2 cut(s)	237, 2033
EcoT22I	ATGCAT	1 cut(s)	964
EcoT38I	GRGCYC	1 cut(s)	1095
EgeI	GGCGCC	2 cut(s)	863, 1510
EheI	GGCGCC	2 cut(s)	863, 1510
ErhI	CCWWGG	2 cut(s)	237, 2033
FaeI	CATG	4 cut(s)	302, 1054, 2046, 2084
FalI	AAGNNNNNCTT	4 cut(s)	703, 735, 1096, 1128
FatI	CATG	4 cut(s)	298, 1050, 2042, 2080
FauNDI	CATATG	1 cut(s)	993
FbaI	TGATCA	3 cut(s)	181, 1099, 1242
FblI	GTMKAC	1 cut(s)	694
Fnu4HI	GCNGC	4 cut(s)	774, 1692, 1974, 2187
FokI	GGATG	5 cut(s)	302, 809, 932, 1507, 2192
FriOI	GRGCYC	1 cut(s)	1095
Fsp4HI	GCNGC	4 cut(s)	774, 1692, 1974, 2187
FspBI	CTAG	7 cut(s)	432, 969, 1022, 1985, 2405, 2462, 2484
GlaI	GCGC	4 cut(s)	863, 987, 1510, 2457
GluI	GCNGC	4 cut(s)	774, 1692, 1974, 2187
GsaI	CCCAGC	1 cut(s)	2413
GsuI	CTGGAG	2 cut(s)	1716, 2407
HaeII	RGCGCY	2 cut(s)	865, 1512
HaeIII	GGCC	1 cut(s)	2273
HapII	CCGG	3 cut(s)	1418, 2270, 2295
HhaI	GCGC	4 cut(s)	864, 988, 1511, 2458
Hin1I	GRCGYC	2 cut(s)	862, 1509
Hin1II	CATG	4 cut(s)	302, 1054, 2046, 2084
Hin6I	GCGC	4 cut(s)	862, 986, 1509, 2456
HinP1I	GCGC	4 cut(s)	862, 986, 1509, 2456
HincII	GTYRAC	1 cut(s)	1614
HindII	GTYRAC	1 cut(s)	1614
HindIII	AAGCTT	2 cut(s)	48, 1169
HinfI	GANTC	8 cut(s)	209, 646, 682, 877, 1355, 2291, 2378, 2420
HpaII	CCGG	3 cut(s)	1418, 2270, 2295
HphI	GGTGA	9 cut(s)	67, 76, 176, 557, 1402, 1424, 1750, 1944, 2429
Hpy166II	GTNNAC	4 cut(s)	351, 695, 1614, 1866
Hpy8I	GTNNAC	4 cut(s)	351, 695, 1614, 1866
HpyAV	CCTTC	6 cut(s)	626, 1034, 1485, 1540, 2064, 2153
HpyCH4III	ACNGT	2 cut(s)	502, 1239
HpyCH4IV	ACGT	2 cut(s)	937, 1979
HpyF10VI	GCNNNNNNNGC	8 cut(s)	985, 1024, 1196, 1334, 1343, 1710, 2183, 2464
HpyF3I	CTNAG	7 cut(s)	85, 171, 841, 1383, 1709, 1989, 2192
HpySE526I	ACGT	2 cut(s)	937, 1979
Hsp92I	GRCGYC	2 cut(s)	862, 1509
Hsp92II	CATG	4 cut(s)	302, 1054, 2046, 2084
HspAI	GCGC	4 cut(s)	862, 986, 1509, 2456
KasI	GGCGCC	2 cut(s)	861, 1508
KpnI	GGTACC	1 cut(s)	1772
Ksp22I	TGATCA	3 cut(s)	181, 1099, 1242
Kzo9I	GATC	8 cut(s)	181, 301, 844, 1099, 1242, 1799, 1949, 2401
LguI	GCTCTTC	1 cut(s)	1314
LmnI	GCTCC	5 cut(s)	145, 1281, 1315, 1560, 2298
Lsp1109I	GCAGC	2 cut(s)	1960, 2198
LweI	GCATC	4 cut(s)	1271, 1380, 2053, 2310
MaeI	CTAG	7 cut(s)	432, 969, 1022, 1985, 2405, 2462, 2484
MaeII	ACGT	2 cut(s)	937, 1979
MalI	GATC	8 cut(s)	183, 303, 846, 1101, 1244, 1801, 1951, 2403
MboI	GATC	8 cut(s)	181, 301, 844, 1099, 1242, 1799, 1949, 2401
MfeI	CAATTG	1 cut(s)	1134
MflI	RGATCY	2 cut(s)	844, 1799
MhlI	GDGCHC	2 cut(s)	330, 1095
Mly113I	GGCGCC	2 cut(s)	862, 1509
MlyI	GAGTC	2 cut(s)	218, 2414
MmeI	TCCRAC	4 cut(s)	201, 441, 589, 1258
Mph1103I	ATGCAT	1 cut(s)	964
MroXI	GAANNNNTTC	1 cut(s)	1359
MspA1I	CMGCKG	1 cut(s)	1694
MspCI	CTTAAG	1 cut(s)	227
MspI	CCGG	3 cut(s)	1418, 2270, 2295
MspR9I	CCNGG	1 cut(s)	2296
MunI	CAATTG	1 cut(s)	1134
Mva1269I	GAATGC	2 cut(s)	964, 988
MvnI	CGCG	1 cut(s)	403
MwoI	GCNNNNNNNGC	8 cut(s)	985, 1024, 1196, 1334, 1343, 1710, 2183, 2464
NarI	GGCGCC	2 cut(s)	862, 1509
NciI	CCSGG	1 cut(s)	2296
NdeI	CATATG	1 cut(s)	993
NdeII	GATC	8 cut(s)	181, 301, 844, 1099, 1242, 1799, 1949, 2401
NlaIII	CATG	4 cut(s)	302, 1054, 2046, 2084
NlaIV	GGNNCC	4 cut(s)	863, 1317, 1510, 1770
NmuCI	GTSAC	5 cut(s)	106, 1727, 1738, 1980, 2417
NsiI	ATGCAT	1 cut(s)	964
PaeR7I	CTCGAG	1 cut(s)	1942
PagI	TCATGA	2 cut(s)	298, 2080
PaqCI	CACCTGC	1 cut(s)	2117
PciSI	GCTCTTC	1 cut(s)	1314
PctI	GAATGC	2 cut(s)	964, 988
PdmI	GAANNNNTTC	1 cut(s)	1359
PfeI	GAWTC	6 cut(s)	646, 682, 877, 1355, 2291, 2378
PflFI	GACNNNGTC	1 cut(s)	926
PflMI	CCANNNNNTGG	1 cut(s)	2155
PfoI	TCCNGGA	1 cut(s)	2294
PkrI	GCNGC	4 cut(s)	775, 1693, 1975, 2188
PleI	GAGTC	2 cut(s)	217, 2414
PluTI	GGCGCC	2 cut(s)	865, 1512
PpsI	GAGTC	2 cut(s)	217, 2414
Ppu21I	YACGTR	1 cut(s)	938
PshBI	ATTAAT	3 cut(s)	158, 624, 1856
Psp124BI	GAGCTC	1 cut(s)	1095
PspFI	CCCAGC	1 cut(s)	2409
PspN4I	GGNNCC	4 cut(s)	863, 1317, 1510, 1770
PstNI	CAGNNNCTG	1 cut(s)	1004
PsuI	RGATCY	2 cut(s)	844, 1799
PsyI	GACNNNGTC	1 cut(s)	926
RsaI	GTAC	7 cut(s)	400, 430, 792, 1031, 1299, 1770, 2246
RsaNI	GTAC	7 cut(s)	399, 429, 791, 1030, 1298, 1769, 2245
SacI	GAGCTC	1 cut(s)	1095
SapI	GCTCTTC	1 cut(s)	1314
SatI	GCNGC	4 cut(s)	774, 1692, 1974, 2187
Sau3AI	GATC	8 cut(s)	181, 301, 844, 1099, 1242, 1799, 1949, 2401
ScaI	AGTACT	2 cut(s)	430, 1299
SchI	GAGTC	2 cut(s)	218, 2414
ScrFI	CCNGG	1 cut(s)	2296
SduI	GDGCHC	2 cut(s)	330, 1095
SfaNI	GCATC	4 cut(s)	1271, 1380, 2053, 2310
SfoI	GGCGCC	2 cut(s)	863, 1510
Sfr274I	CTCGAG	1 cut(s)	1942
SlaI	CTCGAG	1 cut(s)	1942
SmlI	CTYRAG	7 cut(s)	227, 1081, 1570, 1942, 2058, 2310, 2385
SmoI	CTYRAG	7 cut(s)	227, 1081, 1570, 1942, 2058, 2310, 2385
SpeI	ACTAGT	1 cut(s)	431
SsiI	CCGC	5 cut(s)	403, 773, 874, 1692, 2177
SspDI	GGCGCC	2 cut(s)	861, 1508
SspI	AATATT	1 cut(s)	2154
SspMI	CTAG	7 cut(s)	432, 969, 1022, 1985, 2405, 2462, 2484
SstI	GAGCTC	1 cut(s)	1095
StyD4I	CCNGG	1 cut(s)	2294
StyI	CCWWGG	2 cut(s)	237, 2033
TaaI	ACNGT	2 cut(s)	502, 1239
TaiI	ACGT	2 cut(s)	940, 1982
TaqI	TCGA	7 cut(s)	516, 700, 1035, 1108, 1943, 2024, 2289
TatI	WGTACW	3 cut(s)	428, 1297, 2244
TauI	GCSGC	2 cut(s)	776, 1694
TfiI	GAWTC	6 cut(s)	646, 682, 877, 1355, 2291, 2378
TscAI	CASTG	5 cut(s)	1102, 1570, 2196, 2397, 2446
TseFI	GTSAC	5 cut(s)	106, 1727, 1738, 1980, 2417
TseI	GCWGC	2 cut(s)	1973, 2186
Tsp45I	GTSAC	5 cut(s)	106, 1727, 1738, 1980, 2417
TspGWI	ACGGA	2 cut(s)	1757, 2250
TspRI	CASTG	5 cut(s)	1102, 1570, 2196, 2397, 2446
Tth111I	GACNNNGTC	1 cut(s)	926
Van91I	CCANNNNNTGG	1 cut(s)	2155
Vha464I	CTTAAG	1 cut(s)	227
VspI	ATTAAT	3 cut(s)	158, 624, 1856
XapI	RAATTY	9 cut(s)	90, 113, 563, 1369, 1762, 1792, 1806, 2002, 2265
XhoI	CTCGAG	1 cut(s)	1942
XmiI	GTMKAC	1 cut(s)	694
XmnI	GAANNNNTTC	1 cut(s)	1359
XspI	CTAG	7 cut(s)	432, 969, 1022, 1985, 2405, 2462, 2484
ZrmI	AGTACT	2 cut(s)	430, 1299
Zsp2I	ATGCAT	1 cut(s)	964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.