U-box domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g02490 FvH4_7g02490 FvH4_7g02490 |
| malus_domestica | MD02G1293000.v1.1 MD07G1034100.v1.1 |
| prunus_persica | Prupe.2G030600_v2.0.a1 Prupe.2G030600_v2.0.a1 |
| pyrus_communis | pycom02g24740 pycom07g02410 |
| rosa_chinensis | RchiOBHm_Chr1g0321131 |
| rosa_laevigata | RLG00000030449 |
| rosa_multiflora | Rmu_sc0004660.1_g000007 Rmu_sc0007977.1_g000007 |
| rosa_roxburghii | Rroxscaffold_160G00433740 Rroxscaffold_4G00328070 |
| rosa_rugosa | Rorug01G0031200 Rorug01G0031300 |
| rosa_samantha | Rh1AG043200 Rh1BG039900 Rh1CG045300 Rh1DG049900 |
| rosa_wichuraiana | Rw0G001070 Rw1G003790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2300 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2027 |
| AccI | GTMKAC | 1 cut(s) | 1181 |
| AccII | CGCG | 2 cut(s) | 1846, 2961 |
| AciI | CCGC | 4 cut(s) | 1363, 1380, 2313, 2959 |
| AclWI | GGATC | 4 cut(s) | 1222, 1729, 1865, 3133 |
| AcoI | YGGCCR | 1 cut(s) | 2029 |
| AcuI | CTGAAG | 9 cut(s) | 1239, 1922, 2175, 2637, 2963, 2996, 3326, 3434, 3647 |
| AfaI | GTAC | 8 cut(s) | 1834, 1872, 1933, 1982, 2509, 2516, 2799, 3173 |
| AfeI | AGCGCT | 1 cut(s) | 896 |
| AflII | CTTAAG | 1 cut(s) | 3517 |
| AflIII | ACRYGT | 1 cut(s) | 2599 |
| AhlI | ACTAGT | 1 cut(s) | 1070 |
| AjnI | CCWGG | 5 cut(s) | 308, 529, 880, 1800, 3619 |
| AleI | CACNNNNGTG | 1 cut(s) | 1071 |
| Alw21I | GWGCWC | 1 cut(s) | 529 |
| Alw26I | GTCTC | 9 cut(s) | 325, 764, 1856, 2138, 3305, 3420, 3485, 3565, 3779 |
| Alw44I | GTGCAC | 1 cut(s) | 525 |
| AlwI | GGATC | 4 cut(s) | 1222, 1729, 1865, 3133 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3505, 3536 |
| Ama87I | CYCGRG | 1 cut(s) | 3017 |
| Aor51HI | AGCGCT | 1 cut(s) | 896 |
| AoxI | GGCC | 3 cut(s) | 1776, 2029, 3622 |
| ApaLI | GTGCAC | 1 cut(s) | 525 |
| ApeKI | GCWGC | 9 cut(s) | 897, 1540, 1827, 1885, 2296, 2842, 2881, 3330, 3513 |
| AseI | ATTAAT | 2 cut(s) | 953, 1508 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2421, 2913 |
| AspLEI | GCGC | 2 cut(s) | 897, 2301 |
| AspS9I | GGNCC | 1 cut(s) | 1053 |
| AsuC2I | CCSGG | 1 cut(s) | 2847 |
| AsuHPI | GGTGA | 6 cut(s) | 134, 866, 1903, 3230, 3595, 3721 |
| AsuII | TTCGAA | 1 cut(s) | 642 |
| AvaI | CYCGRG | 1 cut(s) | 3017 |
| AvaII | GGWCC | 1 cut(s) | 1053 |
| AxyI | CCTNAGG | 4 cut(s) | 924, 1562, 2988, 3135 |
| BaeGI | GKGCMC | 1 cut(s) | 529 |
| BalI | TGGCCA | 1 cut(s) | 2031 |
| BanII | GRGCYC | 1 cut(s) | 2974 |
| BbsI | GAAGAC | 3 cut(s) | 251, 2984, 3440 |
| Bbv12I | GWGCWC | 1 cut(s) | 529 |
| BbvI | GCAGC | 9 cut(s) | 884, 1527, 1839, 1897, 2283, 2829, 2868, 3317, 3525 |
| BceAI | ACGGC | 1 cut(s) | 1589 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2513, 2547 |
| BciT130I | CCWGG | 5 cut(s) | 310, 531, 882, 1802, 3621 |
| BciVI | GTATCC | 1 cut(s) | 2731 |
| BclI | TGATCA | 1 cut(s) | 2782 |
| BcnI | CCSGG | 1 cut(s) | 2847 |
| BcoDI | GTCTC | 9 cut(s) | 325, 764, 1856, 2138, 3305, 3420, 3485, 3565, 3779 |
| BcuI | ACTAGT | 1 cut(s) | 1070 |
| BfmI | CTRYAG | 5 cut(s) | 1499, 1545, 1883, 2364, 2882 |
| BfoI | RGCGCY | 1 cut(s) | 898 |
| BfrI | CTTAAG | 1 cut(s) | 3517 |
| BfuI | GTATCC | 1 cut(s) | 2731 |
| BglII | AGATCT | 2 cut(s) | 2050, 3694 |
| BisI | GCNGC | 9 cut(s) | 898, 1541, 1828, 1886, 2297, 2843, 2882, 3331, 3514 |
| BlpI | GCTNAGC | 1 cut(s) | 258 |
| BlsI | GCNGC | 9 cut(s) | 899, 1542, 1829, 1887, 2298, 2844, 2883, 3332, 3515 |
| BmcAI | AGTACT | 2 cut(s) | 1834, 3173 |
| Bme1390I | CCNGG | 6 cut(s) | 310, 531, 882, 1802, 2847, 3621 |
| Bme18I | GGWCC | 1 cut(s) | 1053 |
| BmeT110I | CYCGRG | 1 cut(s) | 3017 |
| BmgT120I | GGNCC | 1 cut(s) | 1053 |
| BmiI | GGNNCC | 3 cut(s) | 1329, 2119, 2361 |
| BmrFI | CCNGG | 6 cut(s) | 310, 531, 882, 1802, 2847, 3621 |
| BpiI | GAAGAC | 3 cut(s) | 251, 2984, 3440 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1473 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 258 |
| Bpu14I | TTCGAA | 1 cut(s) | 642 |
| BpuEI | CTTGAG | 7 cut(s) | 2474, 2885, 3257, 3266, 3329, 3395, 3740 |
| BpuMI | CCSGG | 1 cut(s) | 2847 |
| Bsa29I | ATCGAT | 2 cut(s) | 2523, 3847 |
| BsaBI | GATNNNNATC | 3 cut(s) | 678, 953, 1525 |
| BsaI | GGTCTC | 2 cut(s) | 764, 3305 |
| BsaJI | CCNNGG | 9 cut(s) | 309, 735, 880, 881, 1210, 1674, 2026, 2489, 3315 |
| BsaWI | WCCGGW | 1 cut(s) | 775 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1816, 1846, 2168, 2198 |
| Bse1I | ACTGG | 3 cut(s) | 800, 834, 1092 |
| Bse21I | CCTNAGG | 4 cut(s) | 924, 1562, 2988, 3135 |
| Bse3DI | GCAATG | 2 cut(s) | 2073, 3275 |
| Bse8I | GATNNNNATC | 3 cut(s) | 678, 953, 1525 |
| BseBI | CCWGG | 5 cut(s) | 310, 531, 882, 1802, 3621 |
| BseCI | ATCGAT | 2 cut(s) | 2523, 3847 |
| BseDI | CCNNGG | 9 cut(s) | 309, 735, 880, 881, 1210, 1674, 2026, 2489, 3315 |
| BseGI | GGATG | 8 cut(s) | 469, 972, 1771, 1810, 1956, 2113, 2499, 3891 |
| BseJI | GATNNNNATC | 3 cut(s) | 678, 953, 1525 |
| BseMI | GCAATG | 2 cut(s) | 2073, 3275 |
| BseMII | CTCAG | 6 cut(s) | 272, 1464, 2745, 3002, 3126, 3737 |
| BseNI | ACTGG | 3 cut(s) | 800, 834, 1092 |
| BseRI | GAGGAG | 2 cut(s) | 78, 176 |
| BseSI | GKGCMC | 1 cut(s) | 529 |
| BseXI | GCAGC | 9 cut(s) | 884, 1527, 1839, 1897, 2283, 2829, 2868, 3317, 3525 |
| BseYI | CCCAGC | 3 cut(s) | 492, 2219, 3509 |
| BsgI | GTGCAG | 2 cut(s) | 359, 2328 |
| Bsh1236I | CGCG | 2 cut(s) | 1846, 2961 |
| BshFI | GGCC | 3 cut(s) | 1778, 2031, 3624 |
| BshVI | ATCGAT | 2 cut(s) | 2523, 3847 |
| BsiHKAI | GWGCWC | 1 cut(s) | 529 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3017 |
| BsiSI | CCGG | 2 cut(s) | 776, 2846 |
| BslFI | GGGAC | 3 cut(s) | 494, 598, 2235 |
| BsmAI | GTCTC | 9 cut(s) | 325, 764, 1856, 2138, 3305, 3420, 3485, 3565, 3779 |
| BsmBI | CGTCTC | 1 cut(s) | 3779 |
| BsmFI | GGGAC | 3 cut(s) | 494, 598, 2235 |
| BsmI | GAATGC | 2 cut(s) | 1244, 3678 |
| BsnI | GGCC | 3 cut(s) | 1778, 2031, 3624 |
| Bso31I | GGTCTC | 2 cut(s) | 764, 3305 |
| BsoBI | CYCGRG | 1 cut(s) | 3017 |
| Bsp119I | TTCGAA | 1 cut(s) | 642 |
| Bsp1286I | GDGCHC | 2 cut(s) | 529, 2974 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 258 |
| Bsp19I | CCATGG | 1 cut(s) | 1674 |
| Bsp68I | TCGCGA | 1 cut(s) | 1846 |
| BspACI | CCGC | 4 cut(s) | 1363, 1380, 2313, 2959 |
| BspANI | GGCC | 3 cut(s) | 1778, 2031, 3624 |
| BspCNI | CTCAG | 6 cut(s) | 271, 1465, 2746, 3001, 3127, 3738 |
| BspDI | ATCGAT | 2 cut(s) | 2523, 3847 |
| BspFNI | CGCG | 2 cut(s) | 1846, 2961 |
| BspHI | TCATGA | 1 cut(s) | 1891 |
| BspLI | GGNNCC | 3 cut(s) | 1329, 2119, 2361 |
| BspMAI | CTGCAG | 4 cut(s) | 1503, 1549, 1887, 2886 |
| BspPI | GGATC | 4 cut(s) | 1222, 1729, 1865, 3133 |
| BspQI | GCTCTTC | 1 cut(s) | 1458 |
| BspT104I | TTCGAA | 1 cut(s) | 642 |
| BspTI | CTTAAG | 1 cut(s) | 3517 |
| BspTNI | GGTCTC | 2 cut(s) | 764, 3305 |
| BsrDI | GCAATG | 2 cut(s) | 2073, 3275 |
| BsrI | ACTGG | 3 cut(s) | 800, 834, 1092 |
| BssECI | CCNNGG | 9 cut(s) | 309, 735, 880, 881, 1210, 1674, 2026, 2489, 3315 |
| BssT1I | CCWWGG | 5 cut(s) | 735, 1674, 2026, 2489, 3315 |
| Bst2UI | CCWGG | 5 cut(s) | 310, 531, 882, 1802, 3621 |
| Bst6I | CTCTTC | 3 cut(s) | 21, 1458, 3657 |
| BstAFI | CTTAAG | 1 cut(s) | 3517 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2007, 3505 |
| BstBI | TTCGAA | 1 cut(s) | 642 |
| BstC8I | GCNNGC | 4 cut(s) | 768, 1545, 2381, 2665 |
| BstDSI | CCRYGG | 2 cut(s) | 1210, 1674 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2987, 3341 |
| BstF5I | GGATG | 8 cut(s) | 469, 972, 1771, 1810, 1956, 2113, 2499, 3891 |
| BstFNI | CGCG | 2 cut(s) | 1846, 2961 |
| BstH2I | RGCGCY | 1 cut(s) | 898 |
| BstHHI | GCGC | 2 cut(s) | 897, 2301 |
| BstMAI | GTCTC | 9 cut(s) | 325, 764, 1856, 2138, 3305, 3420, 3485, 3565, 3779 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 746, 892, 1474, 1775, 2007, 3505 |
| BstNI | CCWGG | 5 cut(s) | 310, 531, 882, 1802, 3621 |
| BstNSI | RCATGY | 1 cut(s) | 2603 |
| BstSCI | CCNGG | 6 cut(s) | 308, 529, 880, 1800, 2845, 3619 |
| BstSFI | CTRYAG | 5 cut(s) | 1499, 1545, 1883, 2364, 2882 |
| BstSLI | GKGCMC | 1 cut(s) | 529 |
| BstUI | CGCG | 2 cut(s) | 1846, 2961 |
| BstV1I | GCAGC | 9 cut(s) | 884, 1527, 1839, 1897, 2283, 2829, 2868, 3317, 3525 |
| BstV2I | GAAGAC | 3 cut(s) | 251, 2984, 3440 |
| BstX2I | RGATCY | 3 cut(s) | 1214, 2050, 3694 |
| BstYI | RGATCY | 3 cut(s) | 1214, 2050, 3694 |
| Bsu15I | ATCGAT | 2 cut(s) | 2523, 3847 |
| Bsu36I | CCTNAGG | 4 cut(s) | 924, 1562, 2988, 3135 |
| BsuI | GTATCC | 1 cut(s) | 2731 |
| BsuRI | GGCC | 3 cut(s) | 1778, 2031, 3624 |
| BsuTUI | ATCGAT | 2 cut(s) | 2523, 3847 |
| BtgI | CCRYGG | 2 cut(s) | 1210, 1674 |
| BtsCI | GGATG | 8 cut(s) | 469, 972, 1771, 1810, 1956, 2113, 2499, 3891 |
| BtsI | GCAGTG | 4 cut(s) | 1762, 1880, 2413, 3128 |
| BtsIMutI | CAGTG | 8 cut(s) | 628, 1255, 1762, 1880, 2413, 2567, 3128, 3572 |
| BtuMI | TCGCGA | 1 cut(s) | 1846 |
| Cac8I | GCNNGC | 4 cut(s) | 768, 1545, 2381, 2665 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3505, 3536 |
| CciI | TCATGA | 1 cut(s) | 1891 |
| CfoI | GCGC | 2 cut(s) | 897, 2301 |
| Cfr13I | GGNCC | 1 cut(s) | 1053 |
| ClaI | ATCGAT | 2 cut(s) | 2523, 3847 |
| CseI | GACGC | 2 cut(s) | 2936, 3230 |
| Csp6I | GTAC | 8 cut(s) | 1833, 1871, 1932, 1981, 2508, 2515, 2798, 3172 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2478, 2513 |
| CviQI | GTAC | 8 cut(s) | 1833, 1871, 1932, 1981, 2508, 2515, 2798, 3172 |
| EaeI | YGGCCR | 1 cut(s) | 2029 |
| Eam1104I | CTCTTC | 3 cut(s) | 21, 1458, 3657 |
| EarI | CTCTTC | 3 cut(s) | 21, 1458, 3657 |
| Eco130I | CCWWGG | 5 cut(s) | 735, 1674, 2026, 2489, 3315 |
| Eco24I | GRGCYC | 1 cut(s) | 2974 |
| Eco31I | GGTCTC | 2 cut(s) | 764, 3305 |
| Eco32I | GATATC | 1 cut(s) | 805 |
| Eco47I | GGWCC | 1 cut(s) | 1053 |
| Eco47III | AGCGCT | 1 cut(s) | 896 |
| Eco57I | CTGAAG | 9 cut(s) | 1239, 1922, 2175, 2637, 2963, 2996, 3326, 3434, 3647 |
| Eco81I | CCTNAGG | 4 cut(s) | 924, 1562, 2988, 3135 |
| Eco88I | CYCGRG | 1 cut(s) | 3017 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2987, 3341 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1053 |
| EcoRI | GAATTC | 2 cut(s) | 2369, 3904 |
| EcoRII | CCWGG | 5 cut(s) | 308, 529, 880, 1800, 3619 |
| EcoRV | GATATC | 1 cut(s) | 805 |
| EcoT14I | CCWWGG | 5 cut(s) | 735, 1674, 2026, 2489, 3315 |
| EcoT22I | ATGCAT | 2 cut(s) | 1098, 2073 |
| EcoT38I | GRGCYC | 1 cut(s) | 2974 |
| ErhI | CCWWGG | 5 cut(s) | 735, 1674, 2026, 2489, 3315 |
| Esp3I | CGTCTC | 1 cut(s) | 3779 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 36, 68, 884, 916, 1597, 1629 |
| FaqI | GGGAC | 3 cut(s) | 494, 598, 2235 |
| FauI | CCCGC | 1 cut(s) | 1356 |
| FauNDI | CATATG | 1 cut(s) | 3096 |
| FbaI | TGATCA | 1 cut(s) | 2782 |
| FblI | GTMKAC | 1 cut(s) | 1181 |
| Fnu4HI | GCNGC | 9 cut(s) | 898, 1541, 1828, 1886, 2297, 2843, 2882, 3331, 3514 |
| FokI | GGATG | 8 cut(s) | 476, 979, 1778, 1817, 1963, 2120, 2506, 3878 |
| FriOI | GRGCYC | 1 cut(s) | 2974 |
| Fsp4HI | GCNGC | 9 cut(s) | 898, 1541, 1828, 1886, 2297, 2843, 2882, 3331, 3514 |
| FspI | TGCGCA | 1 cut(s) | 2300 |
| GlaI | GCGC | 2 cut(s) | 896, 2300 |
| GluI | GCNGC | 9 cut(s) | 898, 1541, 1828, 1886, 2297, 2843, 2882, 3331, 3514 |
| GsaI | CCCAGC | 3 cut(s) | 496, 2223, 3513 |
| HaeII | RGCGCY | 1 cut(s) | 898 |
| HaeIII | GGCC | 3 cut(s) | 1778, 2031, 3624 |
| HapII | CCGG | 2 cut(s) | 776, 2846 |
| HgaI | GACGC | 2 cut(s) | 2936, 3230 |
| HhaI | GCGC | 2 cut(s) | 897, 2301 |
| Hin6I | GCGC | 2 cut(s) | 895, 2299 |
| HinP1I | GCGC | 2 cut(s) | 895, 2299 |
| HincII | GTYRAC | 2 cut(s) | 1636, 2259 |
| HindII | GTYRAC | 2 cut(s) | 1636, 2259 |
| HindIII | AAGCTT | 1 cut(s) | 3548 |
| HpaI | GTTAAC | 2 cut(s) | 1636, 2259 |
| HpaII | CCGG | 2 cut(s) | 776, 2846 |
| HphI | GGTGA | 6 cut(s) | 134, 866, 1903, 3230, 3595, 3721 |
| Hpy166II | GTNNAC | 8 cut(s) | 527, 715, 1182, 1636, 1968, 2259, 2268, 2852 |
| Hpy8I | GTNNAC | 8 cut(s) | 527, 715, 1182, 1636, 1968, 2259, 2268, 2852 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 746, 892, 1474, 1775, 2007, 3505 |
| HspAI | GCGC | 2 cut(s) | 895, 2299 |
| Ksp22I | TGATCA | 1 cut(s) | 2782 |
| KspAI | GTTAAC | 2 cut(s) | 1636, 2259 |
| LguI | GCTCTTC | 1 cut(s) | 1458 |
| LmnI | GCTCC | 6 cut(s) | 1824, 2230, 2315, 2793, 2992, 3774 |
| Lsp1109I | GCAGC | 9 cut(s) | 884, 1527, 1839, 1897, 2283, 2829, 2868, 3317, 3525 |
| MaeIII | GTNAC | 7 cut(s) | 405, 1073, 1080, 1707, 3222, 3385, 3532 |
| MfeI | CAATTG | 3 cut(s) | 219, 1410, 1770 |
| MflI | RGATCY | 3 cut(s) | 1214, 2050, 3694 |
| MhlI | GDGCHC | 2 cut(s) | 529, 2974 |
| MlsI | TGGCCA | 1 cut(s) | 2031 |
| MluNI | TGGCCA | 1 cut(s) | 2031 |
| MlyI | GAGTC | 6 cut(s) | 103, 374, 516, 2665, 3157, 3681 |
| MmeI | TCCRAC | 5 cut(s) | 1087, 1131, 2653, 2683, 3438 |
| Mox20I | TGGCCA | 1 cut(s) | 2031 |
| Mph1103I | ATGCAT | 2 cut(s) | 1098, 2073 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2421, 2913 |
| MscI | TGGCCA | 1 cut(s) | 2031 |
| MslI | CAYNNNNRTG | 6 cut(s) | 138, 1071, 1803, 1973, 1992, 3849 |
| Msp20I | TGGCCA | 1 cut(s) | 2031 |
| MspCI | CTTAAG | 1 cut(s) | 3517 |
| MspI | CCGG | 2 cut(s) | 776, 2846 |
| MspR9I | CCNGG | 6 cut(s) | 310, 531, 882, 1802, 2847, 3621 |
| MunI | CAATTG | 3 cut(s) | 219, 1410, 1770 |
| Mva1269I | GAATGC | 2 cut(s) | 1244, 3678 |
| MvaI | CCWGG | 5 cut(s) | 310, 531, 882, 1802, 3621 |
| MvnI | CGCG | 2 cut(s) | 1846, 2961 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 746, 892, 1474, 1775, 2007, 3505 |
| NciI | CCSGG | 1 cut(s) | 2847 |
| NcoI | CCATGG | 1 cut(s) | 1674 |
| NdeI | CATATG | 1 cut(s) | 3096 |
| NlaIV | GGNNCC | 3 cut(s) | 1329, 2119, 2361 |
| NmeAIII | GCCGAG | 1 cut(s) | 1171 |
| NmuCI | GTSAC | 4 cut(s) | 1073, 1080, 1707, 3385 |
| NruI | TCGCGA | 1 cut(s) | 1846 |
| NsbI | TGCGCA | 1 cut(s) | 2300 |
| NsiI | ATGCAT | 2 cut(s) | 1098, 2073 |
| NspI | RCATGY | 1 cut(s) | 2603 |
| NspV | TTCGAA | 1 cut(s) | 642 |
| OliI | CACNNNNGTG | 1 cut(s) | 1071 |
| PaeR7I | CTCGAG | 1 cut(s) | 3017 |
| PagI | TCATGA | 1 cut(s) | 1891 |
| PasI | CCCWGGG | 1 cut(s) | 881 |
| PciI | ACATGT | 1 cut(s) | 2599 |
| PciSI | GCTCTTC | 1 cut(s) | 1458 |
| PctI | GAATGC | 2 cut(s) | 1244, 3678 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2421, 2913 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2027 |
| PkrI | GCNGC | 9 cut(s) | 899, 1542, 1829, 1887, 2298, 2844, 2883, 3332, 3515 |
| PleI | GAGTC | 6 cut(s) | 103, 373, 515, 2664, 3157, 3681 |
| PpsI | GAGTC | 6 cut(s) | 103, 373, 515, 2664, 3157, 3681 |
| PpuMI | RGGWCCY | 1 cut(s) | 1053 |
| PscI | ACATGT | 1 cut(s) | 2599 |
| PshBI | ATTAAT | 2 cut(s) | 953, 1508 |
| Psp5II | RGGWCCY | 1 cut(s) | 1053 |
| Psp6I | CCWGG | 5 cut(s) | 308, 529, 880, 1800, 3619 |
| PspFI | CCCAGC | 3 cut(s) | 492, 2219, 3509 |
| PspGI | CCWGG | 5 cut(s) | 308, 529, 880, 1800, 3619 |
| PspN4I | GGNNCC | 3 cut(s) | 1329, 2119, 2361 |
| PspPI | GGNCC | 1 cut(s) | 1053 |
| PspPPI | RGGWCCY | 1 cut(s) | 1053 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1825, 1857 |
| PstI | CTGCAG | 4 cut(s) | 1503, 1549, 1887, 2886 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3505, 3536 |
| PsuI | RGATCY | 3 cut(s) | 1214, 2050, 3694 |
| RruI | TCGCGA | 1 cut(s) | 1846 |
| RsaI | GTAC | 8 cut(s) | 1834, 1872, 1933, 1982, 2509, 2516, 2799, 3173 |
| RsaNI | GTAC | 8 cut(s) | 1833, 1871, 1932, 1981, 2508, 2515, 2798, 3172 |
| RseI | CAYNNNNRTG | 6 cut(s) | 138, 1071, 1803, 1973, 1992, 3849 |
| SapI | GCTCTTC | 1 cut(s) | 1458 |
| SatI | GCNGC | 9 cut(s) | 898, 1541, 1828, 1886, 2297, 2843, 2882, 3331, 3514 |
| Sau96I | GGNCC | 1 cut(s) | 1053 |
| ScaI | AGTACT | 2 cut(s) | 1834, 3173 |
| SchI | GAGTC | 6 cut(s) | 103, 374, 516, 2665, 3157, 3681 |
| ScrFI | CCNGG | 6 cut(s) | 310, 531, 882, 1802, 2847, 3621 |
| SduI | GDGCHC | 2 cut(s) | 529, 2974 |
| SfcI | CTRYAG | 5 cut(s) | 1499, 1545, 1883, 2364, 2882 |
| Sfr274I | CTCGAG | 1 cut(s) | 3017 |
| SfuI | TTCGAA | 1 cut(s) | 642 |
| SinI | GGWCC | 1 cut(s) | 1053 |
| SlaI | CTCGAG | 1 cut(s) | 3017 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 138, 1071, 1803, 1973, 1992, 3849 |
| SmlI | CTYRAG | 9 cut(s) | 2453, 2864, 3017, 3236, 3245, 3308, 3410, 3517, 3719 |
| SmoI | CTYRAG | 9 cut(s) | 2453, 2864, 3017, 3236, 3245, 3308, 3410, 3517, 3719 |
| SpeI | ACTAGT | 1 cut(s) | 1070 |
| SsiI | CCGC | 4 cut(s) | 1363, 1380, 2313, 2959 |
| SspI | AATATT | 3 cut(s) | 1585, 2684, 2807 |
| StyD4I | CCNGG | 6 cut(s) | 308, 529, 880, 1800, 2845, 3619 |
| StyI | CCWWGG | 5 cut(s) | 735, 1674, 2026, 2489, 3315 |
| TaqI | TCGA | 9 cut(s) | 642, 914, 1011, 1525, 1717, 1860, 2523, 3018, 3847 |
| TaqII | GACCGA | 1 cut(s) | 2712 |
| TatI | WGTACW | 4 cut(s) | 1832, 2507, 2797, 3171 |
| TscAI | CASTG | 8 cut(s) | 628, 1255, 1762, 1887, 2413, 2574, 3135, 3572 |
| TseFI | GTSAC | 4 cut(s) | 1073, 1080, 1707, 3385 |
| TseI | GCWGC | 9 cut(s) | 897, 1540, 1827, 1885, 2296, 2842, 2881, 3330, 3513 |
| Tsp45I | GTSAC | 4 cut(s) | 1073, 1080, 1707, 3385 |
| TspRI | CASTG | 8 cut(s) | 628, 1255, 1762, 1887, 2413, 2574, 3135, 3572 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2027 |
| Vha464I | CTTAAG | 1 cut(s) | 3517 |
| VneI | GTGCAC | 1 cut(s) | 525 |
| VpaK11BI | GGWCC | 1 cut(s) | 1053 |
| VspI | ATTAAT | 2 cut(s) | 953, 1508 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2987, 3341 |
| XbaI | TCTAGA | 4 cut(s) | 670, 2287, 3592, 3838 |
| XceI | RCATGY | 1 cut(s) | 2603 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 878 |
| XhoI | CTCGAG | 1 cut(s) | 3017 |
| XmiI | GTMKAC | 1 cut(s) | 1181 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2421, 2913 |
| ZrmI | AGTACT | 2 cut(s) | 1834, 3173 |
| Zsp2I | ATGCAT | 2 cut(s) | 1098, 2073 |