U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g02490 FvH4_7g02490 FvH4_7g02490 |
| malus_domestica | MD02G1293000.v1.1 MD07G1034100.v1.1 |
| prunus_persica | Prupe.2G030600_v2.0.a1 Prupe.2G030600_v2.0.a1 |
| pyrus_communis | pycom02g24740 pycom07g02410 |
| rosa_chinensis | RchiOBHm_Chr1g0321131 |
| rosa_laevigata | RLG00000030449 |
| rosa_multiflora | Rmu_sc0004660.1_g000007 Rmu_sc0007977.1_g000007 |
| rosa_roxburghii | Rroxscaffold_160G00433740 Rroxscaffold_4G00328070 |
| rosa_rugosa | Rorug01G0031200 Rorug01G0031300 |
| rosa_samantha | Rh1AG043200 Rh1BG039900 Rh1CG045300 Rh1DG049900 |
| rosa_wichuraiana | Rw0G001070 Rw1G003790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 105 |
| AcuI | CTGAAG | 2 cut(s) | 123, 137 |
| AgsI | TTSAA | 2 cut(s) | 31, 149 |
| AluBI | AGCT | 1 cut(s) | 70 |
| AluI | AGCT | 1 cut(s) | 70 |
| AsuC2I | CCSGG | 1 cut(s) | 198 |
| BccI | CCATC | 1 cut(s) | 172 |
| BceAI | ACGGC | 1 cut(s) | 92 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BcnI | CCSGG | 1 cut(s) | 198 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 113 |
| BisI | GCNGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 106 |
| Bme1390I | CCNGG | 1 cut(s) | 198 |
| BmrFI | CCNGG | 1 cut(s) | 198 |
| BmrI | ACTGGG | 1 cut(s) | 7 |
| BmuI | ACTGGG | 1 cut(s) | 7 |
| BpuMI | CCSGG | 1 cut(s) | 198 |
| BsaJI | CCNNGG | 1 cut(s) | 197 |
| Bse1I | ACTGG | 1 cut(s) | 13 |
| BseDI | CCNNGG | 1 cut(s) | 197 |
| BseGI | GGATG | 1 cut(s) | 164 |
| BseMII | CTCAG | 2 cut(s) | 14, 87 |
| BseNI | ACTGG | 1 cut(s) | 13 |
| BsiSI | CCGG | 1 cut(s) | 197 |
| BsmI | GAATGC | 1 cut(s) | 106 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| BspACI | CCGC | 1 cut(s) | 105 |
| BspCNI | CTCAG | 2 cut(s) | 15, 88 |
| BsrI | ACTGG | 1 cut(s) | 13 |
| BssECI | CCNNGG | 1 cut(s) | 197 |
| BssMI | GATC | 1 cut(s) | 3 |
| BstDEI | CTNAG | 2 cut(s) | 23, 96 |
| BstF5I | GGATG | 1 cut(s) | 164 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 101, 113 |
| BstNSI | RCATGY | 1 cut(s) | 135 |
| BstSCI | CCNGG | 1 cut(s) | 196 |
| BtsCI | GGATG | 1 cut(s) | 164 |
| CviAII | CATG | 1 cut(s) | 132 |
| CviJI | RGCY | 2 cut(s) | 70, 202 |
| CviKI_1 | RGCY | 2 cut(s) | 70, 202 |
| DdeI | CTNAG | 2 cut(s) | 23, 96 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| Eco32I | GATATC | 1 cut(s) | 61 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 137 |
| EcoRV | GATATC | 1 cut(s) | 61 |
| FaeI | CATG | 1 cut(s) | 135 |
| FaiI | YATR | 1 cut(s) | 133 |
| FatI | CATG | 1 cut(s) | 131 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 1 cut(s) | 105 |
| FokI | GGATG | 1 cut(s) | 151 |
| Fsp4HI | GCNGC | 1 cut(s) | 105 |
| GluI | GCNGC | 1 cut(s) | 105 |
| HapII | CCGG | 1 cut(s) | 197 |
| Hin1II | CATG | 1 cut(s) | 135 |
| HinfI | GANTC | 1 cut(s) | 27 |
| HpaII | CCGG | 1 cut(s) | 197 |
| Hpy166II | GTNNAC | 1 cut(s) | 82 |
| Hpy188I | TCNGA | 2 cut(s) | 24, 142 |
| Hpy8I | GTNNAC | 1 cut(s) | 82 |
| HpyAV | CCTTC | 1 cut(s) | 147 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 101, 113 |
| HpyF3I | CTNAG | 2 cut(s) | 23, 96 |
| Hsp92II | CATG | 1 cut(s) | 135 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LpnPI | CCDG | 2 cut(s) | 26, 210 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MluCI | AATT | 1 cut(s) | 207 |
| MnlI | CCTC | 2 cut(s) | 45, 136 |
| MseI | TTAA | 1 cut(s) | 42 |
| MspI | CCGG | 1 cut(s) | 197 |
| MspR9I | CCNGG | 1 cut(s) | 198 |
| Mva1269I | GAATGC | 1 cut(s) | 106 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 101, 113 |
| NciI | CCSGG | 1 cut(s) | 198 |
| NdeII | GATC | 1 cut(s) | 3 |
| NlaIII | CATG | 1 cut(s) | 135 |
| NmeAIII | GCCGAG | 1 cut(s) | 162 |
| NspI | RCATGY | 1 cut(s) | 135 |
| PctI | GAATGC | 1 cut(s) | 106 |
| PfeI | GAWTC | 1 cut(s) | 27 |
| PkrI | GCNGC | 1 cut(s) | 106 |
| SaqAI | TTAA | 1 cut(s) | 42 |
| SatI | GCNGC | 1 cut(s) | 105 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| ScrFI | CCNGG | 1 cut(s) | 198 |
| SetI | ASST | 2 cut(s) | 72, 128 |
| SgeI | CNNG | 7 cut(s) | 25, 121, 144, 172, 194, 209, 210 |
| Sse9I | AATT | 1 cut(s) | 207 |
| SsiI | CCGC | 1 cut(s) | 105 |
| StyD4I | CCNGG | 1 cut(s) | 196 |
| TasI | AATT | 1 cut(s) | 207 |
| TauI | GCSGC | 1 cut(s) | 107 |
| TfiI | GAWTC | 1 cut(s) | 27 |
| Tru1I | TTAA | 1 cut(s) | 42 |
| Tru9I | TTAA | 1 cut(s) | 42 |
| XceI | RCATGY | 1 cut(s) | 135 |