Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0018500

Physical Location & Seq

Genomic Coordinates Reverse (-)

2758126 .. 2763429

Gene Structure 5304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1034400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGCCTGAAACGCAGCACCTCAATAGTGATGATACCTCTTATACGGTCGAGGAGTATAGGCAACGGAGGGGAATCACTGTTGAAGGCCGTGGTGATATTCCAAACCCCATCAGGAATTTCGATGACACTCGGTTTCCAGAAAATGTTATACAACAATTTTCAAAAGCTGGATTTGCTAGGCCTACACCAATTCAAGCTCAAGTATGGCCAATGGCTTTGGAGGGCCGTGACCTCATTGGTATTGCTCAACCAGGATCCGGGAAGAAGCTGGCGTATCTGATGCCTGCAATTGTCCATATAAACTCCCAGCCAAAACTATCTCGTGGTGGAGATGGCCCAAGAGTATTGATTTTAGCTCCAACGCTGCGACTCGGTGAAGAAATCCAACAAGAGTATGCTAAATTTTGTGCAGCTTCCAACATTAAAGTCTTATTAAGCTGGAAACTGTCTTCTCCTAAAAAAAGTAGAGGTGGGATTCTAATCGCCACACCTAGGTCCTTGCTTGTTGCGTTAGAGGATGGTTATACTAACGTCAGAAGGGTCACATATCTTGTGTTGGATGGCGCTGATTGGATGCTAGAAAAACAAAACATGGGGTTTGGGTCTCAAATACAAGACATTGTTTCTAAGATTCACCCAGACTGTCAAATATTATTGTTGGGTACTAGCTGGTCAAAGGAGGTTGATAAACGGGCAAACCGGTTCCTTTACAACGCATGCAATGTTGAAATTGTTTCTCCACCTCTGAAACCTACACATCCGATCGACCAAACTGTTTACGTCGTTACTGAAGATCAGAAATATAACAAATTGGTAGAGTTGCTAGGTCGTATAGTGGATGGCAGCAGAATATTGATATTCATGGATATAAAGGAAGGATGCGAAAAACGTGATCAGTTTGCCCTGCAGCTTTATAGGGACGGTCAGCATGCAGTCTCGCTTCATGAAAACAAGGGTCAAGCGGAAATGGCCCGGATTGTCTCTGAGTTTCAAGCTGGCAGGATCCCCATAATGATTGCAACAGATGTTGCTGCTCGTGATCTAGATCTGAAGGATGTGAAATATGTTATCAATTACGACTTTCCAGTGTCCCTTGATGATTATGTTTACCGCATTGACCGTGCTGGAAGTGCCGCAGCAAAAGGAACAGTATTCACGTTCTTTACAACTGCTAATGCTGTATTCGCAGAGGAACTTATTATCTTACTCAAGGAAGCTGGACAGAAGGTTAGTTCTGAATTGGAACAACTGGGGCGTGATGTACCATATCCAGGAACCTACATACCTGCACCCTGGCGCTGGGCGGTTAACCAGGAGGAGATTGGAGCTGGTCATTTCTTTCCGTTGTATCTGCATTGTTCTAAGACCAAGGATATTGCCAGTAACGTCGTGCAAGAAATCAGCGGAAAAAAGGGCCTCCAACTGCATTTTTTGAGCGTGGTGGAGGCATACCAACATTTGTCCTGCCTTCCTGTTAGTTACTTTTATCTAACTTTGGAGGCCGCTTGTGCCACAACTTATGAAAAGAAGCTGTACCGAGCAATATTTGTTAGGATGATTGGTGACAGAAAGGAAACCATATTGTTTGGGGATGTCAACTCCGATGGCTTGTTGGAAAGAATACTTGACACCAGGAAGGAAATCAAATATAGAGTCTATAAAATCTGGCAAGAAGCCGATGGAGACTATGAAGAGAATGGAGGCGATGGAAGCGATGGAGACGATGGAGACGATGGAGACGATGAAGGCGATGAAGGCGATGAAGGCGATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

592

Amino Acids

66.31

Weight (kDa)

5.16

Isoelectric Point (pI)

33.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	62 - 229	1.4e-25	DEAD/DEAH box helicase
Helicase_C	PF00271	267 - 377	1.7e-19	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018500)

Species	Orthologous Gene IDs
malus_domestica	MD03G1034400.v1.1 MD03G1034500.v1.1 MD11G1025300.v1.1 MD11G1026100.v1.1 MD11G1037700.v1.1 MD11G1037800.v1.1 MD17G1169600.v1.1 MD17G1170000.v1.1 MD17G1170100.v1.1
pyrus_communis	pycom11g03170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1294
AciI	CCGC	6 cut(s)	962, 1111, 1134, 1304, 1404, 1503
AclWI	GGATC	4 cut(s)	249, 262, 997, 1010
AcoI	YGGCCR	1 cut(s)	206
AcsI	RAATTY	2 cut(s)	115, 401
AcuI	CTGAAG	2 cut(s)	810, 1070
AfaI	GTAC	3 cut(s)	664, 1263, 1535
AfiI	CCNNNNNNNGG	4 cut(s)	257, 492, 1271, 1299
AgeI	ACCGGT	1 cut(s)	699
AgsI	TTSAA	5 cut(s)	83, 162, 194, 728, 992
AjnI	CCWGG	5 cut(s)	250, 1270, 1292, 1311, 1631
Alw26I	GTCTC	7 cut(s)	609, 940, 985, 1677, 1713, 1722, 1731
AlwI	GGATC	4 cut(s)	249, 262, 997, 1010
AoxI	GGCC	8 cut(s)	85, 179, 206, 223, 334, 969, 1414, 1500
ApeKI	GCWGC	7 cut(s)	13, 364, 410, 843, 907, 1031, 1136
ApoI	RAATTY	2 cut(s)	115, 401
ArsI	GACNNNNNNTTYG	2 cut(s)	1638, 1670
AsiGI	ACCGGT	1 cut(s)	699
AspA2I	CCTAGG	1 cut(s)	491
AspLEI	GCGC	2 cut(s)	566, 1299
AspS9I	GGNCC	5 cut(s)	223, 335, 495, 970, 1414
AsuC2I	CCSGG	2 cut(s)	259, 973
AsuHPI	GGTGA	4 cut(s)	104, 386, 626, 1574
AvaII	GGWCC	1 cut(s)	495
AvrII	CCTAGG	1 cut(s)	491
BalI	TGGCCA	1 cut(s)	208
BamHI	GGATCC	2 cut(s)	254, 1002
BauI	CACGAG	2 cut(s)	321, 1035
BbsI	GAAGAC	1 cut(s)	441
BbvI	GCAGC	7 cut(s)	25, 351, 422, 855, 919, 1018, 1148
BceAI	ACGGC	2 cut(s)	72, 210
BciT130I	CCWGG	5 cut(s)	252, 1272, 1294, 1313, 1633
BclI	TGATCA	1 cut(s)	892
BcnI	CCSGG	2 cut(s)	259, 973
BcoDI	GTCTC	7 cut(s)	609, 940, 985, 1677, 1713, 1722, 1731
BfaI	CTAG	6 cut(s)	177, 492, 578, 666, 824, 1043
BfmI	CTRYAG	1 cut(s)	905
BfoI	RGCGCY	2 cut(s)	567, 1300
BfuAI	ACCTGC	1 cut(s)	1294
BglII	AGATCT	1 cut(s)	1045
BisI	GCNGC	9 cut(s)	14, 365, 411, 844, 908, 1032, 1134, 1137, 1503
BlnI	CCTAGG	1 cut(s)	491
BlsI	GCNGC	9 cut(s)	15, 366, 412, 845, 909, 1033, 1135, 1138, 1504
Bme1390I	CCNGG	7 cut(s)	252, 259, 973, 1272, 1294, 1313, 1633
Bme18I	GGWCC	1 cut(s)	495
BmgT120I	GGNCC	5 cut(s)	223, 335, 495, 970, 1414
BmiI	GGNNCC	4 cut(s)	256, 704, 1004, 1276
BmrFI	CCNGG	7 cut(s)	252, 259, 973, 1272, 1294, 1313, 1633
BmrI	ACTGGG	1 cut(s)	1259
BmsI	GCATC	3 cut(s)	270, 564, 869
BmuI	ACTGGG	1 cut(s)	1259
BpiI	GAAGAC	1 cut(s)	441
BpuEI	CTTGAG	2 cut(s)	183, 1193
BpuMI	CCSGG	2 cut(s)	259, 973
BsaBI	GATNNNNATC	2 cut(s)	479, 1044
BsaI	GGTCTC	1 cut(s)	609
BsaJI	CCNNGG	4 cut(s)	88, 491, 1292, 1368
BsaWI	WCCGGW	1 cut(s)	699
Bsc4I	CCNNNNNNNGG	4 cut(s)	257, 492, 1271, 1299
Bse118I	RCCGGY	1 cut(s)	699
Bse1I	ACTGG	3 cut(s)	1085, 1254, 1380
Bse3DI	GCAATG	1 cut(s)	727
Bse8I	GATNNNNATC	2 cut(s)	479, 1044
BseBI	CCWGG	5 cut(s)	252, 1272, 1294, 1313, 1633
BseDI	CCNNGG	4 cut(s)	88, 491, 1292, 1368
BseGI	GGATG	9 cut(s)	523, 565, 579, 757, 844, 884, 1060, 1560, 1597
BseJI	GATNNNNATC	2 cut(s)	479, 1044
BseLI	CCNNNNNNNGG	4 cut(s)	257, 492, 1271, 1299
BseMI	GCAATG	1 cut(s)	727
BseMII	CTCAG	1 cut(s)	975
BseNI	ACTGG	3 cut(s)	1085, 1254, 1380
BseRI	GAGGAG	2 cut(s)	65, 1331
BseXI	GCAGC	7 cut(s)	25, 351, 422, 855, 919, 1018, 1148
BseYI	CCCAGC	2 cut(s)	306, 1299
BsgI	GTGCAG	2 cut(s)	429, 1272
Bsh1285I	CGRYCG	2 cut(s)	48, 765
BshFI	GGCC	8 cut(s)	87, 181, 208, 225, 336, 971, 1416, 1502
BshTI	ACCGGT	1 cut(s)	699
BsiEI	CGRYCG	2 cut(s)	48, 765
BsiSI	CCGG	3 cut(s)	258, 700, 973
BslFI	GGGAC	2 cut(s)	932, 1075
BslI	CCNNNNNNNGG	4 cut(s)	257, 492, 1271, 1299
BsmAI	GTCTC	7 cut(s)	609, 940, 985, 1677, 1713, 1722, 1731
BsmBI	CGTCTC	3 cut(s)	1713, 1722, 1731
BsmFI	GGGAC	2 cut(s)	932, 1075
BsnI	GGCC	8 cut(s)	87, 181, 208, 225, 336, 971, 1416, 1502
Bso31I	GGTCTC	1 cut(s)	609
Bsp143I	GATC	7 cut(s)	254, 762, 793, 892, 1002, 1039, 1045
BspACI	CCGC	6 cut(s)	962, 1111, 1134, 1304, 1404, 1503
BspANI	GGCC	8 cut(s)	87, 181, 208, 225, 336, 971, 1416, 1502
BspCNI	CTCAG	1 cut(s)	976
BspHI	TCATGA	1 cut(s)	943
BspLI	GGNNCC	4 cut(s)	256, 704, 1004, 1276
BspMAI	CTGCAG	1 cut(s)	909
BspMI	ACCTGC	1 cut(s)	1294
BspPI	GGATC	4 cut(s)	249, 262, 997, 1010
BspTNI	GGTCTC	1 cut(s)	609
BsrDI	GCAATG	1 cut(s)	727
BsrFI	RCCGGY	1 cut(s)	699
BsrI	ACTGG	3 cut(s)	1085, 1254, 1380
BssAI	RCCGGY	1 cut(s)	699
BssECI	CCNNGG	4 cut(s)	88, 491, 1292, 1368
BssMI	GATC	7 cut(s)	254, 762, 793, 892, 1002, 1039, 1045
BssSI	CACGAG	2 cut(s)	321, 1035
BssT1I	CCWWGG	2 cut(s)	491, 1368
Bst2BI	CACGAG	2 cut(s)	321, 1035
Bst2UI	CCWGG	5 cut(s)	252, 1272, 1294, 1313, 1633
Bst4CI	ACNGT	8 cut(s)	46, 79, 447, 644, 775, 923, 1121, 1150
Bst6I	CTCTTC	1 cut(s)	1686
BstC8I	GCNNGC	5 cut(s)	270, 285, 718, 930, 997
BstDEI	CTNAG	3 cut(s)	627, 984, 1362
BstDSI	CCRYGG	1 cut(s)	88
BstF5I	GGATG	9 cut(s)	523, 565, 579, 757, 844, 884, 1060, 1560, 1597
BstH2I	RGCGCY	2 cut(s)	567, 1300
BstHHI	GCGC	2 cut(s)	566, 1299
BstKTI	GATC	7 cut(s)	257, 765, 796, 895, 1005, 1042, 1048
BstMAI	GTCTC	7 cut(s)	609, 940, 985, 1677, 1713, 1722, 1731
BstMBI	GATC	7 cut(s)	254, 762, 793, 892, 1002, 1039, 1045
BstMCI	CGRYCG	2 cut(s)	48, 765
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 173, 968, 1130, 1184, 1508, 1710, 1755, 1764
BstNI	CCWGG	5 cut(s)	252, 1272, 1294, 1313, 1633
BstNSI	RCATGY	2 cut(s)	720, 932
BstSCI	CCNGG	7 cut(s)	250, 257, 971, 1270, 1292, 1311, 1631
BstSFI	CTRYAG	1 cut(s)	905
BstV1I	GCAGC	7 cut(s)	25, 351, 422, 855, 919, 1018, 1148
BstV2I	GAAGAC	1 cut(s)	441
BstX2I	RGATCY	3 cut(s)	254, 1002, 1045
BstYI	RGATCY	3 cut(s)	254, 1002, 1045
BsuRI	GGCC	8 cut(s)	87, 181, 208, 225, 336, 971, 1416, 1502
BtgI	CCRYGG	1 cut(s)	88
BtgZI	GCGATG	3 cut(s)	1719, 1728, 1764
BtsCI	GGATG	9 cut(s)	523, 565, 579, 757, 844, 884, 1060, 1560, 1597
BtsIMutI	CAGTG	2 cut(s)	75, 1092
BveI	ACCTGC	1 cut(s)	1294
Cac8I	GCNNGC	5 cut(s)	270, 285, 718, 930, 997
CciI	TCATGA	1 cut(s)	943
CfoI	GCGC	2 cut(s)	566, 1299
Cfr10I	RCCGGY	1 cut(s)	699
Cfr13I	GGNCC	5 cut(s)	223, 335, 495, 970, 1414
Csp6I	GTAC	3 cut(s)	663, 1262, 1534
CspAI	ACCGGT	1 cut(s)	699
CviAII	CATG	5 cut(s)	592, 717, 862, 929, 944
CviQI	GTAC	3 cut(s)	663, 1262, 1534
DdeI	CTNAG	3 cut(s)	627, 984, 1362
DpnI	GATC	7 cut(s)	256, 764, 795, 894, 1004, 1041, 1047
DpnII	GATC	7 cut(s)	254, 762, 793, 892, 1002, 1039, 1045
EaeI	YGGCCR	1 cut(s)	206
Eam1104I	CTCTTC	1 cut(s)	1686
EarI	CTCTTC	1 cut(s)	1686
Eco130I	CCWWGG	2 cut(s)	491, 1368
Eco147I	AGGCCT	1 cut(s)	181
Eco31I	GGTCTC	1 cut(s)	609
Eco47I	GGWCC	1 cut(s)	495
Eco57I	CTGAAG	2 cut(s)	810, 1070
EcoO109I	RGGNCCY	2 cut(s)	495, 1414
EcoRII	CCWGG	5 cut(s)	250, 1270, 1292, 1311, 1631
EcoT14I	CCWWGG	2 cut(s)	491, 1368
ErhI	CCWWGG	2 cut(s)	491, 1368
Esp3I	CGTCTC	3 cut(s)	1713, 1722, 1731
FaeI	CATG	5 cut(s)	595, 720, 865, 932, 947
FaqI	GGGAC	2 cut(s)	932, 1075
FatI	CATG	5 cut(s)	591, 716, 861, 928, 943
FbaI	TGATCA	1 cut(s)	892
Fnu4HI	GCNGC	9 cut(s)	14, 365, 411, 844, 908, 1032, 1134, 1137, 1503
FokI	GGATG	9 cut(s)	530, 572, 586, 744, 851, 891, 1067, 1567, 1604
Fsp4HI	GCNGC	9 cut(s)	14, 365, 411, 844, 908, 1032, 1134, 1137, 1503
FspBI	CTAG	6 cut(s)	177, 492, 578, 666, 824, 1043
GlaI	GCGC	2 cut(s)	565, 1298
GluI	GCNGC	9 cut(s)	14, 365, 411, 844, 908, 1032, 1134, 1137, 1503
GsaI	CCCAGC	2 cut(s)	310, 1303
HaeII	RGCGCY	2 cut(s)	567, 1300
HaeIII	GGCC	8 cut(s)	87, 181, 208, 225, 336, 971, 1416, 1502
HapII	CCGG	3 cut(s)	258, 700, 973
HhaI	GCGC	2 cut(s)	566, 1299
Hin1II	CATG	5 cut(s)	595, 720, 865, 932, 947
Hin6I	GCGC	2 cut(s)	564, 1297
HinP1I	GCGC	2 cut(s)	564, 1297
HincII	GTYRAC	2 cut(s)	1309, 1597
HindII	GTYRAC	2 cut(s)	1309, 1597
HinfI	GANTC	5 cut(s)	72, 369, 475, 631, 1653
HpaI	GTTAAC	1 cut(s)	1309
HpaII	CCGG	3 cut(s)	258, 700, 973
HphI	GGTGA	4 cut(s)	104, 386, 626, 1574
Hpy166II	GTNNAC	4 cut(s)	778, 1108, 1309, 1597
Hpy188I	TCNGA	9 cut(s)	279, 536, 747, 762, 798, 985, 1050, 1237, 1603
Hpy188III	TCNNGA	5 cut(s)	112, 137, 944, 1037, 1043
Hpy8I	GTNNAC	4 cut(s)	778, 1108, 1309, 1597
Hpy99I	CGWCG	2 cut(s)	785, 1391
HpyCH4III	ACNGT	8 cut(s)	46, 79, 447, 644, 775, 923, 1121, 1150
HpyCH4IV	ACGT	5 cut(s)	531, 780, 889, 1157, 1386
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 173, 968, 1130, 1184, 1508, 1710, 1755, 1764
HpyF3I	CTNAG	3 cut(s)	627, 984, 1362
HpySE526I	ACGT	5 cut(s)	531, 780, 889, 1157, 1386
Hsp92II	CATG	5 cut(s)	595, 720, 865, 932, 947
HspAI	GCGC	2 cut(s)	564, 1297
Ksp22I	TGATCA	1 cut(s)	892
KspAI	GTTAAC	1 cut(s)	1309
Kzo9I	GATC	7 cut(s)	254, 762, 793, 892, 1002, 1039, 1045
LmnI	GCTCC	2 cut(s)	361, 1325
Lsp1109I	GCAGC	7 cut(s)	25, 351, 422, 855, 919, 1018, 1148
LweI	GCATC	3 cut(s)	270, 564, 869
MaeI	CTAG	6 cut(s)	177, 492, 578, 666, 824, 1043
MaeII	ACGT	5 cut(s)	531, 780, 889, 1157, 1386
MaeIII	GTNAC	6 cut(s)	227, 541, 784, 1382, 1478, 1562
MalI	GATC	7 cut(s)	256, 764, 795, 894, 1004, 1041, 1047
MboI	GATC	7 cut(s)	254, 762, 793, 892, 1002, 1039, 1045
MboII	GAAGA	5 cut(s)	274, 389, 441, 803, 1703
MfeI	CAATTG	1 cut(s)	288
MflI	RGATCY	3 cut(s)	254, 1002, 1045
MlsI	TGGCCA	1 cut(s)	208
MluCI	AATT	9 cut(s)	115, 155, 189, 288, 401, 729, 809, 1072, 1238
MluNI	TGGCCA	1 cut(s)	208
MlyI	GAGTC	2 cut(s)	363, 1662
MmeI	TCCRAC	6 cut(s)	383, 409, 441, 537, 1444, 1593
Mox20I	TGGCCA	1 cut(s)	208
MscI	TGGCCA	1 cut(s)	208
MseI	TTAA	3 cut(s)	423, 434, 1308
Msp20I	TGGCCA	1 cut(s)	208
MspA1I	CMGCKG	1 cut(s)	1404
MspI	CCGG	3 cut(s)	258, 700, 973
MspR9I	CCNGG	7 cut(s)	252, 259, 973, 1272, 1294, 1313, 1633
MunI	CAATTG	1 cut(s)	288
MvaI	CCWGG	5 cut(s)	252, 1272, 1294, 1313, 1633
MwoI	GCNNNNNNNGC	9 cut(s)	10, 173, 968, 1130, 1184, 1508, 1710, 1755, 1764
NciI	CCSGG	2 cut(s)	259, 973
NdeII	GATC	7 cut(s)	254, 762, 793, 892, 1002, 1039, 1045
NlaIII	CATG	5 cut(s)	595, 720, 865, 932, 947
NlaIV	GGNNCC	4 cut(s)	256, 704, 1004, 1276
NmuCI	GTSAC	3 cut(s)	227, 541, 1562
NspI	RCATGY	2 cut(s)	720, 932
PaeI	GCATGC	2 cut(s)	720, 932
PagI	TCATGA	1 cut(s)	943
PceI	AGGCCT	1 cut(s)	181
PcsI	WCGNNNNNNNCGW	3 cut(s)	1728, 1737, 1746
PfeI	GAWTC	3 cut(s)	72, 475, 631
PfoI	TCCNGGA	2 cut(s)	257, 1270
PinAI	ACCGGT	1 cut(s)	699
PkrI	GCNGC	9 cut(s)	15, 366, 412, 845, 909, 1033, 1135, 1138, 1504
Ple19I	CGATCG	1 cut(s)	765
PleI	GAGTC	2 cut(s)	363, 1661
PpsI	GAGTC	2 cut(s)	363, 1661
PpuMI	RGGWCCY	1 cut(s)	495
Psp5II	RGGWCCY	1 cut(s)	495
Psp6I	CCWGG	5 cut(s)	250, 1270, 1292, 1311, 1631
PspFI	CCCAGC	2 cut(s)	306, 1299
PspGI	CCWGG	5 cut(s)	250, 1270, 1292, 1311, 1631
PspN4I	GGNNCC	4 cut(s)	256, 704, 1004, 1276
PspPI	GGNCC	5 cut(s)	223, 335, 495, 970, 1414
PspPPI	RGGWCCY	1 cut(s)	495
PstI	CTGCAG	1 cut(s)	909
PsuI	RGATCY	3 cut(s)	254, 1002, 1045
PvuI	CGATCG	1 cut(s)	765
RsaI	GTAC	3 cut(s)	664, 1263, 1535
RsaNI	GTAC	3 cut(s)	663, 1262, 1534
SaqAI	TTAA	3 cut(s)	423, 434, 1308
SatI	GCNGC	9 cut(s)	14, 365, 411, 844, 908, 1032, 1134, 1137, 1503
Sau3AI	GATC	7 cut(s)	254, 762, 793, 892, 1002, 1039, 1045
Sau96I	GGNCC	5 cut(s)	223, 335, 495, 970, 1414
SchI	GAGTC	2 cut(s)	363, 1662
ScrFI	CCNGG	7 cut(s)	252, 259, 973, 1272, 1294, 1313, 1633
SfaNI	GCATC	3 cut(s)	270, 564, 869
SfcI	CTRYAG	1 cut(s)	905
SinI	GGWCC	1 cut(s)	495
SmlI	CTYRAG	2 cut(s)	198, 1208
SmoI	CTYRAG	2 cut(s)	198, 1208
SphI	GCATGC	2 cut(s)	720, 932
Sse9I	AATT	9 cut(s)	115, 155, 189, 288, 401, 729, 809, 1072, 1238
SseBI	AGGCCT	1 cut(s)	181
SsiI	CCGC	6 cut(s)	962, 1111, 1134, 1304, 1404, 1503
SspI	AATATT	3 cut(s)	651, 852, 1545
SspMI	CTAG	6 cut(s)	177, 492, 578, 666, 824, 1043
StuI	AGGCCT	1 cut(s)	181
StyD4I	CCNGG	7 cut(s)	250, 257, 971, 1270, 1292, 1311, 1631
StyI	CCWWGG	2 cut(s)	491, 1368
TaaI	ACNGT	8 cut(s)	46, 79, 447, 644, 775, 923, 1121, 1150
TaiI	ACGT	5 cut(s)	534, 783, 892, 1160, 1389
TaqI	TCGA	3 cut(s)	48, 120, 765
TasI	AATT	9 cut(s)	115, 155, 189, 288, 401, 729, 809, 1072, 1238
TauI	GCSGC	2 cut(s)	1136, 1505
TfiI	GAWTC	3 cut(s)	72, 475, 631
Tru1I	TTAA	3 cut(s)	423, 434, 1308
Tru9I	TTAA	3 cut(s)	423, 434, 1308
TscAI	CASTG	2 cut(s)	82, 1092
TseFI	GTSAC	3 cut(s)	227, 541, 1562
TseI	GCWGC	7 cut(s)	13, 364, 410, 843, 907, 1031, 1136
Tsp45I	GTSAC	3 cut(s)	227, 541, 1562
TspDTI	ATGAA	8 cut(s)	850, 932, 960, 1536, 1704, 1758, 1767, 1776
TspGWI	ACGGA	2 cut(s)	79, 1332
TspRI	CASTG	2 cut(s)	82, 1092
VpaK11BI	GGWCC	1 cut(s)	495
XapI	RAATTY	2 cut(s)	115, 401
XbaI	TCTAGA	1 cut(s)	1042
XceI	RCATGY	2 cut(s)	720, 932
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1319
XmaJI	CCTAGG	1 cut(s)	491
XspI	CTAG	6 cut(s)	177, 492, 578, 666, 824, 1043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.